mRNA_C-australica_Contig_10453.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10453.1.1
Unique NamemRNA_C-australica_Contig_10453.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10453.1.1 vs. uniprot
Match: A0A222E3W1_9RHOB (Methylated-DNA--protein-cysteine methyltransferase n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E3W1_9RHOB)

HSP 1 Score: 273 bits (698), Expect = 1.920e-92
Identity = 135/147 (91.84%), Postives = 138/147 (93.88%), Query Frame = 1
Query:    1 CVETPTGPFEITESDGQITSATWTPSEAADDTPLLRRAAAQIAAYFDGTLTDFDLPLAVEASDFQRQVCAKIAAIPFGETTTYGEIAKGLGAPAQAVGRGCGGNPIPLLIPCHRVLGANGLGGFSGGTGVETKVWLLRHEGAGGLLI 441
            CV TPTGPFEITE+ GQITSATW  S AADDTPLLRRAA Q+AAYFDGTLTDFDLPL V ASDFQ+QVCAKIAAIPFGETTTYGEIAK LGAPAQAVGRGCGGNPIPLLIPCHRVLGANGLGGFSGGTGVETKVWLLRHEGAGGLLI
Sbjct:    5 CVATPTGPFEITETGGQITSATWITSTAADDTPLLRRAAEQVAAYFDGTLTDFDLPLTVAASDFQQQVCAKIAAIPFGETTTYGEIAKALGAPAQAVGRGCGGNPIPLLIPCHRVLGANGLGGFSGGTGVETKVWLLRHEGAGGLLI 151          
BLAST of mRNA_C-australica_Contig_10453.1.1 vs. uniprot
Match: UPI001C976115 (methylated-DNA--[protein]-cysteine S-methyltransferase n=3 Tax=Rhodobacterales TaxID=204455 RepID=UPI001C976115)

HSP 1 Score: 244 bits (622), Expect = 7.410e-81
Identity = 121/147 (82.31%), Postives = 130/147 (88.44%), Query Frame = 1
Query:    1 CVETPTGPFEITESDGQITSATWTPSEAADDTPLLRRAAAQIAAYFDGTLTDFDLPLAVEASDFQRQVCAKIAAIPFGETTTYGEIAKGLGAPAQAVGRGCGGNPIPLLIPCHRVLGANGLGGFSGGTGVETKVWLLRHEGAGGLLI 441
            C++TPTG FEI E++G IT ATWT S A DDTPLL RAAAQ+AAYFDGTLT+FDLP  VEAS FQ+QVCA+IAAIPFGETTTYGEIAK L AP QAVGRGCGGNPIPL IPCHRVLG+NGLGGFSGGTGVETKV LLRHE AGGLLI
Sbjct:    5 CIDTPTGRFEIIETEGAITRATWTDSAARDDTPLLNRAAAQVAAYFDGTLTEFDLPFRVEASPFQQQVCAQIAAIPFGETTTYGEIAKTLNAPPQAVGRGCGGNPIPLFIPCHRVLGSNGLGGFSGGTGVETKVALLRHEKAGGLLI 151          
BLAST of mRNA_C-australica_Contig_10453.1.1 vs. uniprot
Match: A0A0B3S8J6_9RHOB (Methylated-DNA--protein-cysteine methyltransferase n=6 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A0B3S8J6_9RHOB)

HSP 1 Score: 243 bits (620), Expect = 1.500e-80
Identity = 119/147 (80.95%), Postives = 131/147 (89.12%), Query Frame = 1
Query:    1 CVETPTGPFEITESDGQITSATWTPSEAADDTPLLRRAAAQIAAYFDGTLTDFDLPLAVEASDFQRQVCAKIAAIPFGETTTYGEIAKGLGAPAQAVGRGCGGNPIPLLIPCHRVLGANGLGGFSGGTGVETKVWLLRHEGAGGLLI 441
            C++TPTGPFEITE+DG IT ATWT S+A+D TPLLRRAA Q+AAYF G LT FDLPL V AS FQ+QVCA+IAAIPFGET TYG+IA+ LGAP QAVGRGCGGNPI L+IPCHRVLG +GLGGFSGGTGVETKVWLLRHEGAGGLLI
Sbjct:    5 CIDTPTGPFEITETDGAITRATWTRSDASDATPLLRRAADQVAAYFAGRLTTFDLPLRVAASPFQQQVCAQIAAIPFGETLTYGDIARTLGAPPQAVGRGCGGNPIALIIPCHRVLGRDGLGGFSGGTGVETKVWLLRHEGAGGLLI 151          
BLAST of mRNA_C-australica_Contig_10453.1.1 vs. uniprot
Match: A0A238KZ94_9RHOB (Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238KZ94_9RHOB)

HSP 1 Score: 234 bits (598), Expect = 3.370e-77
Identity = 118/147 (80.27%), Postives = 125/147 (85.03%), Query Frame = 1
Query:    1 CVETPTGPFEITESDGQITSATWTPSEAADDTPLLRRAAAQIAAYFDGTLTDFDLPLAVEASDFQRQVCAKIAAIPFGETTTYGEIAKGLGAPAQAVGRGCGGNPIPLLIPCHRVLGANGLGGFSGGTGVETKVWLLRHEGAGGLLI 441
            C++TPTG FEITE+DG ITSA WT S A DDTPLLRRAAAQ+A YF   LT FDLPL V  SDFQR VCA+IAAIPFGETTTYG IAK L APAQAVG+ CGGNPIPL+IPCHRVLGA GLGGFSG  GVETKVWLLRHEGAGGLLI
Sbjct:    5 CLDTPTGVFEITETDGAITSAAWTASGARDDTPLLRRAAAQVADYFARRLTVFDLPLRVGGSDFQRAVCAQIAAIPFGETTTYGAIAKALSAPAQAVGQACGGNPIPLIIPCHRVLGAQGLGGFSGAHGVETKVWLLRHEGAGGLLI 151          
BLAST of mRNA_C-australica_Contig_10453.1.1 vs. uniprot
Match: A0A1H0BVW1_9RHOB (Methylated-DNA-[protein]-cysteine S-methyltransferase n=1 Tax=Lutimaribacter pacificus TaxID=391948 RepID=A0A1H0BVW1_9RHOB)

HSP 1 Score: 219 bits (557), Expect = 5.750e-71
Identity = 107/146 (73.29%), Postives = 122/146 (83.56%), Query Frame = 1
Query:    4 VETPTGPFEITESDGQITSATWTPSEAADDTPLLRRAAAQIAAYFDGTLTDFDLPLAVEASDFQRQVCAKIAAIPFGETTTYGEIAKGLGAPAQAVGRGCGGNPIPLLIPCHRVLGANGLGGFSGGTGVETKVWLLRHEGAGGLLI 441
            V++P G   ITE+DG IT+ TW   + ADDTPLLRRAAAQ+AAYF G   DFDLPL V  SD Q ++CA IAAIPFGET TYGE+++GL  PAQAVGRGCGGNPIP+LIPCHRVLGA GLGGFSGGTG+ETK+WLL+HEGAGGLLI
Sbjct:    6 VDSPVGALTITETDGAITALTWG-GQGADDTPLLRRAAAQLAAYFAGERGDFDLPLKVHGSDSQIRICAAIAAIPFGETRTYGELSRGLDLPAQAVGRGCGGNPIPILIPCHRVLGAQGLGGFSGGTGIETKIWLLKHEGAGGLLI 150          
BLAST of mRNA_C-australica_Contig_10453.1.1 vs. uniprot
Match: A0A1H9AFG7_9RHOB (Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Thalassobius taeanensis TaxID=657014 RepID=A0A1H9AFG7_9RHOB)

HSP 1 Score: 212 bits (539), Expect = 3.170e-68
Identity = 105/146 (71.92%), Postives = 119/146 (81.51%), Query Frame = 1
Query:    4 VETPTGPFEITESDGQITSATWTPSEAADDTPLLRRAAAQIAAYFDGTLTDFDLPLAVEASDFQRQVCAKIAAIPFGETTTYGEIAKGLGAPAQAVGRGCGGNPIPLLIPCHRVLGANGLGGFSGGTGVETKVWLLRHEGAGGLLI 441
            V+TPTGP  +TE+DG IT  TW     +D TPLL  AA QI AYF GTL  FDLPL+V  S FQ+QVCA IAAIPFG+T TYG+IA+ LGAPAQAVG+ CGGNPIP++IPCHRVLGA+GLGGFSG  GVETKVWLL+HEGAGGLLI
Sbjct:    6 VDTPTGPLTLTETDGAITHVTWEQG-GSDQTPLLTEAARQITAYFAGTLRTFDLPLSVNGSAFQQQVCAAIAAIPFGDTRTYGQIARDLGAPAQAVGQACGGNPIPVIIPCHRVLGASGLGGFSGAGGVETKVWLLKHEGAGGLLI 150          
BLAST of mRNA_C-australica_Contig_10453.1.1 vs. uniprot
Match: A0A0L1JRP0_9RHOB (Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Pseudaestuariivita atlantica TaxID=1317121 RepID=A0A0L1JRP0_9RHOB)

HSP 1 Score: 207 bits (526), Expect = 3.030e-66
Identity = 102/146 (69.86%), Postives = 115/146 (78.77%), Query Frame = 1
Query:    4 VETPTGPFEITESDGQITSATWTPSEAADDTPLLRRAAAQIAAYFDGTLTDFDLPLAVEASDFQRQVCAKIAAIPFGETTTYGEIAKGLGAPAQAVGRGCGGNPIPLLIPCHRVLGANGLGGFSGGTGVETKVWLLRHEGAGGLLI 441
            ++TPTGPF +TE DG IT ATW        TPLL RAA Q+AAYF GT   FDLP+ +  S+FQR VCA++AAIPFG+T TYGEIA  L APAQAVG+ CGGNPIPL++PCHRVL A GLGGFSGG GVETKVWLLRHEGA GLLI
Sbjct:    6 LDTPTGPFTLTEEDGAITGATWGAGPV-QWTPLLTRAADQVAAYFAGTRRSFDLPVQIAGSEFQRAVCARMAAIPFGDTVTYGEIAAALDAPAQAVGQACGGNPIPLIVPCHRVLAAQGLGGFSGGAGVETKVWLLRHEGAAGLLI 150          
BLAST of mRNA_C-australica_Contig_10453.1.1 vs. uniprot
Match: X6KVH7_9RHOB (Cysteine methyltransferase n=1 Tax=Rhodobacteraceae bacterium PD-2 TaxID=1169855 RepID=X6KVH7_9RHOB)

HSP 1 Score: 206 bits (525), Expect = 4.440e-66
Identity = 106/146 (72.60%), Postives = 113/146 (77.40%), Query Frame = 1
Query:    4 VETPTGPFEITESDGQITSATWTPSEAADDTPLLRRAAAQIAAYFDGTLTDFDLPLAVEASDFQRQVCAKIAAIPFGETTTYGEIAKGLGAPAQAVGRGCGGNPIPLLIPCHRVLGANGLGGFSGGTGVETKVWLLRHEGAGGLLI 441
            ++TPTG  EI E  G IT ATW  + A  ++PLL  A AQI AYF G  T FDLPL V A  FQR+VCA+IAAIP GET TYGEIA  LG PAQ VGRGCGGNPIPLLIPCHRVLGA GLGGFSGG GVETKVWLLRHEGA GLLI
Sbjct:    6 IDTPTGLSEIVEEGGAITRATWQVTGARGESPLLDEADAQITAYFQGKRTRFDLPLRVVADPFQRRVCAEIAAIPHGETRTYGEIAARLGKPAQTVGRGCGGNPIPLLIPCHRVLGATGLGGFSGGAGVETKVWLLRHEGAAGLLI 151          
BLAST of mRNA_C-australica_Contig_10453.1.1 vs. uniprot
Match: A0A3A8AXI4_9RHOB (Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Roseovarius spongiae TaxID=2320272 RepID=A0A3A8AXI4_9RHOB)

HSP 1 Score: 206 bits (523), Expect = 8.950e-66
Identity = 101/143 (70.63%), Postives = 112/143 (78.32%), Query Frame = 1
Query:   13 PTGPFEITESDGQITSATWTPSEAADDTPLLRRAAAQIAAYFDGTLTDFDLPLAVEASDFQRQVCAKIAAIPFGETTTYGEIAKGLGAPAQAVGRGCGGNPIPLLIPCHRVLGANGLGGFSGGTGVETKVWLLRHEGAGGLLI 441
            P G   IT  DG IT+  W  ++A D TP L  A  Q+ AYFDG LT+FDLPL VE S FQR VCA+IAAIPFGET +YG+IA+ LGAPAQAVG GCGGNPIP++IPCHRVLGA GLGGFSG  GVETKVWLLRHEGA GLLI
Sbjct:    9 PVGRLTITARDGAITALDWGAADAEDSTPELDEARRQLTAYFDGALTEFDLPLRVEGSGFQRDVCAQIAAIPFGETRSYGDIARALGAPAQAVGAGCGGNPIPIMIPCHRVLGATGLGGFSGAGGVETKVWLLRHEGAAGLLI 151          
BLAST of mRNA_C-australica_Contig_10453.1.1 vs. uniprot
Match: UPI001ADAB5D1 (methylated-DNA--[protein]-cysteine S-methyltransferase n=1 Tax=Shimia sp. R11_0 TaxID=2821096 RepID=UPI001ADAB5D1)

HSP 1 Score: 206 bits (523), Expect = 8.950e-66
Identity = 100/146 (68.49%), Postives = 116/146 (79.45%), Query Frame = 1
Query:    4 VETPTGPFEITESDGQITSATWTPSEAADDTPLLRRAAAQIAAYFDGTLTDFDLPLAVEASDFQRQVCAKIAAIPFGETTTYGEIAKGLGAPAQAVGRGCGGNPIPLLIPCHRVLGANGLGGFSGGTGVETKVWLLRHEGAGGLLI 441
            VETPTGP  +TE DG I  A W   +  D TPLLRRAAAQ+ AYF+     FDLPL VEAS+FQ++VCA + AIP GET TYG+++K LG PAQA+G+GCGGNPIP++IPCHRVLGANGLGGFSG  GVETKVWLL+HE A GLLI
Sbjct:    6 VETPTGPMILTEQDGAIVRAAWGECDQDDGTPLLRRAAAQLTAYFEDPAEGFDLPLRVEASEFQQKVCAAMLAIPLGETRTYGDLSKELGVPAQAIGQGCGGNPIPVIIPCHRVLGANGLGGFSGEGGVETKVWLLKHERAAGLLI 151          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10453.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A222E3W1_9RHOB1.920e-9291.84Methylated-DNA--protein-cysteine methyltransferase... [more]
UPI001C9761157.410e-8182.31methylated-DNA--[protein]-cysteine S-methyltransfe... [more]
A0A0B3S8J6_9RHOB1.500e-8080.95Methylated-DNA--protein-cysteine methyltransferase... [more]
A0A238KZ94_9RHOB3.370e-7780.27Methylated-DNA--protein-cysteine methyltransferase... [more]
A0A1H0BVW1_9RHOB5.750e-7173.29Methylated-DNA-[protein]-cysteine S-methyltransfer... [more]
A0A1H9AFG7_9RHOB3.170e-6871.92Methylated-DNA--protein-cysteine methyltransferase... [more]
A0A0L1JRP0_9RHOB3.030e-6669.86Methylated-DNA--protein-cysteine methyltransferase... [more]
X6KVH7_9RHOB4.440e-6672.60Cysteine methyltransferase n=1 Tax=Rhodobacteracea... [more]
A0A3A8AXI4_9RHOB8.950e-6670.63Methylated-DNA--protein-cysteine methyltransferase... [more]
UPI001ADAB5D18.950e-6668.49methylated-DNA--[protein]-cysteine S-methyltransfe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10453contigC-australica_Contig_10453:376..819 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog388399.SSE37_10884
Preferred nameogt
PFAMsDNA_binding_1,Methyltransf_1N
Model size444
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K00567
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.14e-63
EggNOG OGsCOG0350@1|root,COG0350@2|Bacteria,1N2YQ@1224|Proteobacteria,2VEUJ@28211|Alphaproteobacteria
EC2.1.1.63
DescriptionInvolved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Cds size444
COG categoryL
BRITEko00000,ko01000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586781.800686-CDS-C-australica_Contig_10453:375..8191682586781.800686-CDS-C-australica_Contig_10453:375..819Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10453 376..819 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10453.1.1prot_C-australica_Contig_10453.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10453 376..819 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10453.1.1

>prot_C-australica_Contig_10453.1.1 ID=prot_C-australica_Contig_10453.1.1|Name=mRNA_C-australica_Contig_10453.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=148bp
CVETPTGPFEITESDGQITSATWTPSEAADDTPLLRRAAAQIAAYFDGTL
TDFDLPLAVEASDFQRQVCAKIAAIPFGETTTYGEIAKGLGAPAQAVGRG
CGGNPIPLLIPCHRVLGANGLGGFSGGTGVETKVWLLRHEGAGGLLI*
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mRNA from alignment at C-australica_Contig_10453:376..819-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10453.1.1 ID=mRNA_C-australica_Contig_10453.1.1|Name=mRNA_C-australica_Contig_10453.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=444bp|location=Sequence derived from alignment at C-australica_Contig_10453:376..819- (Chrysoparadoxa australica CS_1217)
TGCGTGGAAACCCCCACCGGCCCGTTTGAGATCACTGAATCCGATGGCCA GATCACAAGTGCGACATGGACCCCCAGCGAGGCCGCAGACGACACACCGC TGTTGCGCCGCGCCGCTGCCCAGATCGCCGCCTACTTCGACGGCACCCTG ACGGATTTCGATCTGCCGCTGGCAGTCGAGGCGAGTGATTTTCAGCGACA GGTCTGCGCCAAAATCGCCGCCATCCCCTTTGGCGAAACCACCACCTACG GTGAGATTGCCAAGGGCCTCGGCGCCCCTGCTCAGGCCGTGGGGCGCGGC TGTGGCGGCAACCCCATCCCGCTGCTCATCCCGTGTCATCGGGTACTGGG CGCCAACGGATTGGGCGGTTTTTCCGGCGGAACGGGGGTTGAAACCAAGG TCTGGCTTTTGCGGCACGAAGGCGCGGGCGGGCTGCTGATCTAA
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Coding sequence (CDS) from alignment at C-australica_Contig_10453:376..819-

>mRNA_C-australica_Contig_10453.1.1 ID=mRNA_C-australica_Contig_10453.1.1|Name=mRNA_C-australica_Contig_10453.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=444bp|location=Sequence derived from alignment at C-australica_Contig_10453:376..819- (Chrysoparadoxa australica CS_1217)
TGCGTGGAAACCCCCACCGGCCCGTTTGAGATCACTGAATCCGATGGCCA
GATCACAAGTGCGACATGGACCCCCAGCGAGGCCGCAGACGACACACCGC
TGTTGCGCCGCGCCGCTGCCCAGATCGCCGCCTACTTCGACGGCACCCTG
ACGGATTTCGATCTGCCGCTGGCAGTCGAGGCGAGTGATTTTCAGCGACA
GGTCTGCGCCAAAATCGCCGCCATCCCCTTTGGCGAAACCACCACCTACG
GTGAGATTGCCAAGGGCCTCGGCGCCCCTGCTCAGGCCGTGGGGCGCGGC
TGTGGCGGCAACCCCATCCCGCTGCTCATCCCGTGTCATCGGGTACTGGG
CGCCAACGGATTGGGCGGTTTTTCCGGCGGAACGGGGGTTGAAACCAAGG
TCTGGCTTTTGCGGCACGAAGGCGCGGGCGGGCTGCTGATCTAA
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