mRNA_C-australica_Contig_1045.3.5 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1045.3.5
Unique NamemRNA_C-australica_Contig_1045.3.5
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1045.3.5 vs. uniprot
Match: D7FWK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK2_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 1.940e-30
Identity = 157/553 (28.39%), Postives = 260/553 (47.02%), Query Frame = 3
Query: 1119 ASTGVEEQ---QGMVPTLSSIVGELKKATDALCARLSGLDGQRSRTQAEQQRLTKEIEAARAELVEQECEQQRLADAEEFEAADALSTAVEQLQAGLEETQANLLELNREEELLHTESHTGREDLLRALGTVASDLDSFTHKQGTVLGSLLSDSAKRCEAEGRRIVEEQERLAIELGHVRREEEHLREEVEEAEAAISAQAKADIEEKERLQGVRSGLEKDIARLMEELDLKRQALVEAEXXXXXXXXXXXKVKAKYDRQLARLKEREKLTQVSKADCEAEAAALELSRQKQSALQAEAQAGQQQFEDDLNIAGSELAAAKLLEGALTAHWGDSAAKGSKAG---GGRALGELQAR-------VVAVMEEVEALK-------QDVAKSEARQVQLAEERSVLSRSLPQLELAKKAAAAAKDYKEAASISKQVKSVVSRQDEIAAEIEETKSCIARITSAGGKLPRKQEELEGHRQKVLELSKVTQQAHYLQLTDKIAQLRRTQRKIEATCKPASE------LRACADLLLEMELSAMGAEAAELEARYGFTDP 2699
            A +G EE    Q M   LS ++   ++ +++L  RL+    +++  +  +  L          L E E EQQRLAD E++E A  LS  +E L+         L EL  +   L   S   R +LL A+      L  F  +Q   LG L+S+ A   E E RR+  EQER+ +                 + E AIS Q   +     +L+ +R  LE ++  L  +L+ KR AL E              V+ K++RQL RL+ERE+L +VS+ DC+ E A+L+  R +   L  +A   QQ   D +     ++  A++L+  L+ HW   +  G+       G   G+  +R       +VA+  EVE  +       + VA  + R+  L  E +  + +LP LE  K+AA  AK+YKEA  +S+Q+K    RQ E+   + + +  +A  ++A       ++ELEG + ++++  +  + A     T +IA L R  + +    +  +       LR  A+ LL ++L+++ AEA ++ AR+G   P
Sbjct:  477 AFSGEEENGAVQEMRAELSVLIDAFQQKSESLSNRLTEAAAEKAALECSRTSLRNSHAEGIRRLAEAESEQQRLADEEDYEKAAELSLEIENLKEESASAARRLRELEEDGGSLDRSSAEARHELLVAVEETTRGLKVFQGRQDAKLGKLVSERAALFEEENRRMNTEQERIVLXXXXXXXXXXXXXXXXSQTEKAISDQTGGEDARMSKLRLMRMELEGEVKDLEAQLEAKRGALREVLVGLDEAEGRISAVRGKFERQLQRLRERERLVEVSRQDCQTEEASLQGDRDRHRELMEQATKEQQGLMDAVEGIADDVKLAEVLQSTLSKHWTSESRTGTVPADEKNGAETGDEDSRNDARDDALVALRSEVEGARSRYELKGRAVAALDERKDVLKAEMATNADALPDLEQRKRAAVGAKNYKEAGQVSRQIKETERRQQEVLELLSDLEHSVAEGSAA-------RKELEGTKTELMQAEEALRVAEEAVATSRIAALERRAKPLRIASRAVARRGKTGGLRDAAESLLVVQLASLDAEAKDISARHGLAPP 1022          
BLAST of mRNA_C-australica_Contig_1045.3.5 vs. uniprot
Match: A0A8J2WVN1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WVN1_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 4.280e-15
Identity = 124/394 (31.47%), Postives = 189/394 (47.97%), Query Frame = 3
Query: 1191 ATDALCARLSGLDGQRSRTQAEQQRLTKEIEAARAELVEQECEQQRLADAEEFEAADALSTAVEQLQAGLEETQANLLELNREEELLHTESHTGREDLLRALGTVASDLDSFTHKQGTVLGSLLSDSAKRCEAEGRRIVEEQERLAIELGHVRREEEHLREEVEEAEAAISAQAKADIEEKERLQGVRSGLE---KDIARLMEELDLKRQALVEAEXXXXXXXXXXXKVKAKYDRQLARLKEREKLTQVSKADCEAEAAALELSRQKQSALQAEAQAGQQQFEDDLNIAGSELAAAKLLEGALTAHWGDSAAKGSKAGGGRALGELQARVVAVMEEVEA-LKQDVAKSEARQ---VQLAEERSVLSRSLPQLELAKKAAAAAKDYKEAASISKQ 2351
            AT+ LC RLS  + +    Q E+Q L +E  +  A L +   EQ  LA+AE++E ADAL   V+  +  +E     L EL+R+     +     R+D   AL  +AS L  F   Q +VL    +++ ++   E +R+  E ERLA+E  HV R+   + +E E  E  I  Q   D+E ++ L   R+  E   +D+ R +  L+ +R A VEAE             ++K++RQL RL +R+++ + S  DCE E  AL+  R +Q+   A   A           A SEL AA  L  +      D               E   +     EE EA L++  +K +A     + L      L   LP+LE  KKAAAAA++YKEA +++K+
Sbjct:  293 ATEDLCMRLSSHERRGVEAQRERQALAEERSSLDAALAKVLKEQAELAEAEDYEGADALQVRVDAARREVELRVERLDELDRDVHSEDSSIEQRRKDHELALKDLASWLRRFHEDQRSVLTCEEANAERKSSTEEKRLAAEGERLAMERAHVDRDAALVADEFERMEQLIEQQTSGDLERRDALADQRALKELELEDLRRRVAVLEAERDA-VEAELDDCDGKIKL--ARSKFERQLQRLAQRDQMVKASAKDCEREQHALDAERAQQACSGALVAADLSSRRRVAETAASELDAADRLANSKPVWQADEVDDDD---------ESLRQPRKNCEEAEASLREACSKRDALDDDALILRNALKALDDRLPELERQKKAAAAARNYKEAGALAKE 674          
BLAST of mRNA_C-australica_Contig_1045.3.5 vs. uniprot
Match: A0A3F2RJ36_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJ36_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.360e-7
Identity = 127/500 (25.40%), Postives = 227/500 (45.40%), Query Frame = 3
Query: 1317 EQQRLADAEEFEAADALSTAVEQLQAGLEETQANLLELNREEELLHTESHTGREDLLRALGTVASDLDSFTHKQGTVLGSLLS-------DSAKRCEAEGRRIVEEQERLAIELGHVRREEEHLREEVEEA---EAAISAQAKADIEEKERLQGVRSGLEKDIARLMEELDLKRQALVEAEXXXXXXXXXXXKVKAKYDRQLARLKEREKLTQVSKADCEAEAAALELSRQKQSALQAEAQAGQQQFEDDLNIAGS-------ELAAAKLLEGALTAHWGDSAAKGSKAGGGRALGELQARVVAVMEEVEALKQDVAKSEARQVQLAEERSVLSRS---LPQLELAKKAAAAAKDYKEAASISKQVKSVVSRQDEIAAEIEETKSCIARITSAGGKLPRKQEELEGHRQKVLELSKVTQQAHYLQLTDKIAQLRRTQRKIEATCKPASE-------LRACADLLLEMELSAMGAEAAELEARYGFTDPGSDERETEDGGE 2735
            +Q    + E+FE ADAL+  +  ++  +  T++++ +L+ E             + L++      +L+ F   Q T    + +       D  ++ + E  RI  E   +++ L +V  E+  + + VE+    E AI AQ    +EEKE        +E+++  L  +L LK + + E +            V+ +Y RQL R+ +RE+  Q +KA+ EA+   L+  RQ       E Q   +Q+ DD+ + G        E+ AA LL   L     ++  + S     +   EL +   A     ++      + E  +  L+  R+ ++ +   +P+LE  KKAAAA +++KEAA ISK +K++   +D   AE E  +     +     ++ +++ E E  ++++ E+ K  + A   +L  +   LR   R+IE  CK   +        R+ A LL++ E  A   +   LE +Y   DP  D  E EDG E
Sbjct:  194 QQHHACEIEDFEKADALNATINSVRHCITLTESDVRKLDSELVAFVKAKEKAFANQLKSTRGTLRELEKFREDQETERMDVRNEYKQYEADQTEQLQFEAERIDTEMHHVSVSLENVIAEKSEIEKTVEDQCGPEFAIQAQL---LEEKE-------SVEEEVRELERKLKLKLERVQEIQSLIDTAQRDIDTVRKRYSRQLKRIADREEGIQKTKAEVEADGEHLQDQRQ-------EFQEQLKQYSDDITVIGKRIGAVRKEMRAASLLANVLEVQ--ETRREQSLIRKKQQTAELSSLNDATAVAEQSFTMLSNQHEELEKSLSIHRNAIASAEAMIPRLEQEKKAAAAQRNFKEAARISKDIKAL--EKDRSTAE-EMVEVVEMELQDLKERIDKREVEYEEKKKELKEMEKHLELATLQELWKEAKHLRVALRRIEK-CKSEGDAADDGIDFRSSAMLLVQAEYDACMLQVETLERKYEVADPTKDADELEDGEE 670          
BLAST of mRNA_C-australica_Contig_1045.3.5 vs. uniprot
Match: M4BZA7_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BZA7_HYAAE)

HSP 1 Score: 66.2 bits (160), Expect = 5.610e-7
Identity = 141/593 (23.78%), Postives = 264/593 (44.52%), Query Frame = 3
Query: 1266 LTKEIEAARAELVEQECEQQRLADAEEFEAADALSTAVEQLQAGLEETQANLLELNREEELLHTESHTGREDLLRALGTVASDLDSFTHKQGTVLGSLLSDSAKRCEAEGRRIVE-EQERLAIELGHVRREEEHLREEVEEAEAAISAQAKADIEEKERLQGVRSGLEKDIARLMEELDLKRQALVEAEXXXXXXXXXXXKVKAKYDRQLARLKEREKLTQVSKADCEAEAAALELSRQKQSALQAEAQAGQQQFEDDLNIAGS-------ELAAAKLLEGALTAHWGDSAAKGSKAGGGRALGELQARVVAVMEEVEALKQDVAKSEARQVQLAEERSVLSRSL-------PQLELAKKAAAAAKDYKEAASISKQVKSVVSRQDEIAAEIEETKSCIARITSAGGKLPRKQEELEGHRQKVLELSKVTQQAHYLQLTDKIAQLRRTQRKIEATCKPASE-------LRACADLLLEMELSAMGAEAAELEARYGFTDPGSDER-------------ETEDGGEHATAP---------DEGNASAAAPESGPKELPRGHARELQELQERLDAAVAEEDFEQAALIQDQITSM 2912
            L  ++    A+L + E +QQ   + E+FE ADAL+  +  ++  +  T++++ +L+ E             + LR+      +L+ F   Q +   +++ +  K  E   +  ++ E ER+  EL HV    E++  E  E EA I  Q  ++   + RL   +S +E+++  L  +L  K + + + +            V+ +Y RQL R+ +RE   + +KA+ E++   LE  RQ       E     +Q+ D++++ G+       E+ AA LL   L     ++  + S     +   EL +    + +     +Q       + V+L +  S+   ++       P+LE  KK AAA +++KEAA ISK +K++   +D   AE E  +     +     ++ R++ E E  ++++ E+ K  + A   +L  +   L+   RKIE  CK   +        R+ A LL++ E  A   +   LE +Y  +DP  D+                + G E ++           D G+ +     S  KE+    A +L +L+ R+  A   E+++ AA + DQI S+
Sbjct:  460 LANQLTQYEADLRDVEVQQQHACEVEDFEKADALNATINSVRHCITLTESDVRKLDSELVAFVRTKEKAFANQLRSTRGTLRELEKFCEDQESER-TVVRNEYKLYEINQKEQLQFEAERIGTELHHVSVSLENVNSEKSEIEATIEGQCSSEFAVQARLIEEKSAVEEEVRELELQLKKKLERVRKIQSAIDTAQRDINTVRKRYSRQLKRIADRENGIKKTKAEVESDGDHLEQQRQ-------EFHDKLKQYADNISLIGNRIGTVKKEMRAASLLANVLELQ--ETRREQSLIRKKQQTAELSS----LNDATAVAEQSFTMLNNQHVELEKSLSIHRNAIASAETMIPRLEQEKKVAAAQRNFKEAARISKDIKAL--EKDRSTAE-EMVEVVEMELQDLKERIDRREVEYEEKKKELREMEKHLELATLQELWKEAKSLQTALRKIEK-CKSHGDAANDGIDFRSSAMLLVQAEYDACVLQVGVLEKKYDVSDPTKDDEVXXXXXXXXXXXXXXKKGSERSSFAGKVTDVEKMDAGDKNTENSTSVLKEI----AAKLLQLESRIQEATTNEEYDLAANLDDQIESL 1030          
BLAST of mRNA_C-australica_Contig_1045.3.5 vs. uniprot
Match: F0XWH3_AURAN (Casc1_N domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWH3_AURAN)

HSP 1 Score: 65.9 bits (159), Expect = 7.510e-7
Identity = 128/471 (27.18%), Postives = 201/471 (42.68%), Query Frame = 3
Query: 1317 EQQRLADAEEFEAADALSTAVEQLQAGLEETQANLLELNREEELLHTESHTGREDLLRALGTVASDLDSFTHKQGTVLGSLLSDSAKRCEAEGRRIVEEQERLAIELGHVRREEEHLREEVEEAEAAISAQAKADIE-------EKERLQGVRSGLEKDIARLMEELDLKRQALVEAEXXXXXXXXXXXKVKAKYDRQLARLKEREKLTQVSKADCEAEAAALELSRQKQSALQAEAQAGQQQFEDDLNIAGSELAAAKLLEGALTAHWGDSAAKGSKAGGGRALGELQARVVAVMEEVEALKQDVAKSEARQVQLAEERSV----LSRSLPQLELAKKAAAAAKDYKEAASISKQVKSVVSRQDEIAAEIEETKSCIARITSA-GGKLPRKQEELEGHRQKVLELSKVTQQAHYLQLTDKIAQLRRTQRKI-EATCKPASELRACADLLLEMELSAMGAEAAELEARYGF 2690
            EQ RLA+ E++EAADA+S  VE ++  +      L +L  E +    E    R +  RA+  V + L++F  +    L +   D+  +  A  +R+  E ERLA+E  HV R+  H+ +E E  EA I AQ   D         EKER       L++ +A L  E D     L + +             ++K+                       E AAL++  ++   L+AE  A         + A  EL  A  L  A      D+   G+    G    EL    VAV E  EAL  D + + A     A         +   LP L++AKKAAAAA++YKEA +++K+ K++ +++++   ++      +A    A G          EG   +  +    T +A    L  K + LRR +R   E   K    L A A  L+++EL+ + A A +L  + G 
Sbjct:  280 EQARLAELEDYEAADAMSVEVETMKREMALRSGKLRDLCVEVDRAEREVGGRRAEQRRAVEGVVAWLEAFERETRDALAAQTRDADAKQAALRQRVAAEGERLAMEKAHVERDAAHVADEFERMEALIEAQTSGDAARRHALSLEKERKDAELEELQRRLAVLSAERDAVSAELGDCDDKIQL-------ARSKFXXXXXXXXXXXXXXXXXXXXXXRELAALDVETRRCDDLEAETAAQLDGVARVCDDARDELVVAARLRDA------DAVWAGAALDVGGESSELHELRVAVAE-AEALVHDASTARAGLADDATRHGDTVKRVEEKLPALDVAKKAAAAARNYKEAGALAKEAKALEAQREDAQRDLAALDGPLAAADEALGAARAAHAAAAEGLEARERDDEVATLRA----LRAKASDLRRAKRSFAEPRAKAQLRLTAAAVALVQVELATVSARADDLRGKRGL 732          
BLAST of mRNA_C-australica_Contig_1045.3.5 vs. uniprot
Match: A0A2D4BFT7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFT7_PYTIN)

HSP 1 Score: 61.6 bits (148), Expect = 1.380e-5
Identity = 144/600 (24.00%), Postives = 250/600 (41.67%), Query Frame = 3
Query: 1266 LTKEIEAARAELVEQECEQQRLADAEEFEAADALSTAVEQLQAGLEETQANLLELNREEELLHTESHTGREDLLRALGTVASDLDSFTHKQGTVLGSLLSDSAKRCEAEGRRIVEEQERLAIELGHVRREEEHLREEVEEAEAAISAQAKADIEEKERLQGVRSGLEKDIARLMEELDLKRQALVEAEXXXXXXXXXXXKVKAKYDRQLARLKEREKLTQVSKADCEAEAAALELSRQKQSALQAEAQAGQQQFEDDLNIAGSELAAAKLLEGALTAHWGDSAAKGSKAGGGRALGELQARVVAVME-----EVEALKQDVAKSEARQVQLAEERSVLSRSL--------------PQLELAKKAAAAAKDYKEAASISKQVKSVVSRQ---DEIAAEIE-ETKSCIARITSAGGKLPRKQEELEGHRQKVLELSKVTQQAHYLQLTDKIAQLRRTQRKIEA------TCKPASELRACADLLLEMELSAMGAEAAELEARYGFTDPGSDE--------------------RETEDGGEHATAPDEGNASAAAPE--SGPKELPRGHARELQELQERLDAAVAEEDFEQAALIQDQITSM 2912
            L K++     +L + E +QQ+  +AE+FE ADAL+ A+  ++  +  T+++L + + E             + L++      +L+ F   Q     +L  +  K      R   ++ E                       ++ I  Q K +I  +E L   R+G+E++I  L  +L LK   +   +            V++KY RQL R+ +RE+    +KA+ EA+A  L+  + +      + +A   ++   +     E+ AA LL   L                     E +    AV +     E+ AL      +E   V L ++ + L +SL              PQLE  KK AAA +++KEAA ISK +KS+   Q   +E+   +E E +    RI     +   K+EEL+   ++ LEL+ + +      L  +   LR++ R+IE             + R+ A LL++ E  A  ++A  L+A++G  DP   E                    R TE   +    PD   + A   +   GP  L    A+ L EL+  ++ A   ED+E AA + ++I ++
Sbjct:  444 LAKQLTQYEIDLRDIEAQQQQACEAEDFEKADALNGAINSVRHCITLTESDLRKADNELAAFLKAKEKAFANQLKSTRGTLKELEKFREDQDNERAALREELKKFRTRANRSSPKKSE----------------------IDSTIEEQCKDEIXLREELLEKRAGVEEEIRELERQLKLKMDEMRGIQSSIDKADHEIEAVRSKYSRQLKRIADREEGLLKTKAEVEADAEQLKQEKVQFGEKIEDYEARISEYGKRMTTVKKEMRAAMLLVSVLEVQ------------------ETRREQSAVRKKQHTAELTALSDAATIAEQSYVMLQKQHNELEKSLSVHRNAIASAEAMIPQLEQEKKNAAAQRNFKEAARISKDIKSLEKDQATAEEMVEVVEMELQDLKERIVKREAECEDKKEELKTV-ERQLELNALQE------LWKEAKLLRKSIRRIERIKTESLAAADGVDFRSSALLLVQAEYDACMSQADVLQAKHGVEDPSQXEEIEDDXXXXXXXXXXXXEVERMTETSAQVVGXPDSSVSEAVENDIGDGPAALEEISAK-LTELEXMIEKATENEDYELAAKLDEKIDTL 995          
BLAST of mRNA_C-australica_Contig_1045.3.5 vs. uniprot
Match: A0A329S0L9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S0L9_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 7.430e-5
Identity = 128/581 (22.03%), Postives = 246/581 (42.34%), Query Frame = 3
Query: 1311 ECEQQRLADAEEFEAADALSTAVEQLQAGLEETQANLLELNREEELLHTESHTGREDLLRALGTVASDLDSFTHKQGTVLGSLLSDSAKRCEAEGRRIVEEQERLAIELGHVRREEEHLREEVEEAEAAISAQAKADIEEKERLQGVRSGLEKDIARLMEELDLKRQALVEAEXXXXXXXXXXXKVKAKYDRQLARLKEREKLTQVSKADCEAEAAALELSRQKQSALQAEAQAGQQQFEDDLNIAGSELAAAK--LLEGALTAHWGDSAAKGSKAGGGRALGELQARVVAVMEEVEALKQDVAKSEARQVQLAEERSVLSRSL--------------PQLELAKKAAAAAKDYKEAASISKQVKSVVSRQDEIAAEIEETKSCIARITSAGGKLPRKQEELEGHRQKVLELSKVTQQAHYLQLTDKIAQLRRTQRKIEATCKPASE-------LRACADLLLEMELSAMGAEAAELEARYGFTDPGSDER------------ETEDGGEHAT---------APD-EGNASAAAPESGPKELPRGHARELQELQERLDAAVAEEDFEQAALIQDQITSMED 2918
            E +Q    + E+FE ADAL+  +  ++  +  T++++ +++ E             + L++      +L+ F   Q +    + ++       +  ++  E ER+  E+ HV    E++  E  E EA I  Q  ++   + +L   +  +E+++  L        + + + +            V+ +Y RQL R+ +RE+  + +KA+ E++   LE  R        + Q   +Q+ +D+ + G  + A K  +   AL A+  +      +        +   R      E+ +L    A +E     L+ +   L +S+              P+LE  KK AAA +++KEAA ISK +K++   +D   AE E  +     +     ++ +++ E E  ++++ E+ K  + A   +L  +   LR   RKIE  CK   E        R+ A LL++ E  A   +   LE +Y  +DP  DE             E ++G EH +         APD EG+                    L EL+ +++ A   ED++ AA + ++I  +++
Sbjct:  821 EAQQHHACEVEDFEKADALNATINSVRHCITLTESDVRKVDSELVAFVKAKEKAFANQLKSTRGTLRELEKFREDQESERTVVRNEYKLYESNQTEQLQFEAERIDTEMHHVSVSLENVVAEKSEIEATIEGQCSSEFAIQAQLMEEKEAVEEEVRELXXXXXXXLERVQQIQSSIDTAQRDIDTVRGRYSRQLKRIADREEGIKKTKAEVESDGEHLEQQR-------LDFQDKLKQYAEDITVIGKRIGAVKKEMRAAALLANVLEVQETRRE--------QSMIRKKQQTAELSSLNDAAAVAEQSFTMLSNQHEELEKSMSIHRNAIASAEAMIPRLEQEKKGAAAQRNFKEAARISKDIKAL--EKDRSTAE-EMVEVVEMELQDLKERIGKREVEFEEKKKELKEMEKHLELATLQELWKEAKHLRTALRKIEK-CKSEGEAASDGIDFRSSAVLLVQAEYDACMLQVETLERKYDVSDPAKDEEVEDXXXXXSLDGEDDEGSEHVSISRSSLTGKAPDVEGSDVXXXXXXXXXXXXXXXXXHLVELESQIEKATENEDYDLAARLDEKIEDLKE 1382          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1045.3.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FWK2_ECTSI1.940e-3028.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J2WVN1_9STRA4.280e-1531.47Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A3F2RJ36_9STRA1.360e-725.40Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
M4BZA7_HYAAE5.610e-723.78Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
F0XWH3_AURAN7.510e-727.18Casc1_N domain-containing protein n=1 Tax=Aureococ... [more]
A0A2D4BFT7_PYTIN1.380e-524.00Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A329S0L9_9STRA7.430e-522.03Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1045contigC-australica_Contig_1045:4788..12603 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FWK2
Model size4301
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons24
Evalue2.86e-31
EggNOG OGs2CNI7@1|root,2QWH7@2759|Eukaryota
Cds size4059
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586781.1182237-UTR-C-australica_Contig_1045:4787..48701682586781.1182237-UTR-C-australica_Contig_1045:4787..4870Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1045 4788..4870 +
1682586781.3590343-UTR-C-australica_Contig_1045:12444..126031682586781.3590343-UTR-C-australica_Contig_1045:12444..12603Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1045 12445..12603 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586781.1296644-CDS-C-australica_Contig_1045:4870..49901682586781.1296644-CDS-C-australica_Contig_1045:4870..4990Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 4871..4990 +
1682586781.139108-CDS-C-australica_Contig_1045:5141..52141682586781.139108-CDS-C-australica_Contig_1045:5141..5214Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 5142..5214 +
1682586781.151539-CDS-C-australica_Contig_1045:5312..55511682586781.151539-CDS-C-australica_Contig_1045:5312..5551Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 5313..5551 +
1682586781.17026-CDS-C-australica_Contig_1045:5619..57511682586781.17026-CDS-C-australica_Contig_1045:5619..5751Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 5620..5751 +
1682586781.1785715-CDS-C-australica_Contig_1045:5962..60611682586781.1785715-CDS-C-australica_Contig_1045:5962..6061Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 5963..6061 +
1682586781.186715-CDS-C-australica_Contig_1045:6435..64771682586781.186715-CDS-C-australica_Contig_1045:6435..6477Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 6436..6477 +
1682586781.1948416-CDS-C-australica_Contig_1045:6729..68531682586781.1948416-CDS-C-australica_Contig_1045:6729..6853Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 6730..6853 +
1682586781.2030883-CDS-C-australica_Contig_1045:7107..75381682586781.2030883-CDS-C-australica_Contig_1045:7107..7538Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 7108..7538 +
1682586781.2111442-CDS-C-australica_Contig_1045:7670..77691682586781.2111442-CDS-C-australica_Contig_1045:7670..7769Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 7671..7769 +
1682586781.2186186-CDS-C-australica_Contig_1045:7911..80481682586781.2186186-CDS-C-australica_Contig_1045:7911..8048Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 7912..8048 +
1682586781.226324-CDS-C-australica_Contig_1045:8145..84911682586781.226324-CDS-C-australica_Contig_1045:8145..8491Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 8146..8491 +
1682586781.2346094-CDS-C-australica_Contig_1045:8706..88111682586781.2346094-CDS-C-australica_Contig_1045:8706..8811Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 8707..8811 +
1682586781.2519639-CDS-C-australica_Contig_1045:8906..90831682586781.2519639-CDS-C-australica_Contig_1045:8906..9083Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 8907..9083 +
1682586781.2676013-CDS-C-australica_Contig_1045:9197..95331682586781.2676013-CDS-C-australica_Contig_1045:9197..9533Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 9198..9533 +
1682586781.2758155-CDS-C-australica_Contig_1045:9684..99101682586781.2758155-CDS-C-australica_Contig_1045:9684..9910Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 9685..9910 +
1682586781.2840383-CDS-C-australica_Contig_1045:10001..102191682586781.2840383-CDS-C-australica_Contig_1045:10001..10219Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 10002..10219 +
1682586781.2920682-CDS-C-australica_Contig_1045:10378..104541682586781.2920682-CDS-C-australica_Contig_1045:10378..10454Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 10379..10454 +
1682586781.2998629-CDS-C-australica_Contig_1045:10646..107221682586781.2998629-CDS-C-australica_Contig_1045:10646..10722Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 10647..10722 +
1682586781.3078227-CDS-C-australica_Contig_1045:10823..109471682586781.3078227-CDS-C-australica_Contig_1045:10823..10947Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 10824..10947 +
1682586781.3158326-CDS-C-australica_Contig_1045:11045..111041682586781.3158326-CDS-C-australica_Contig_1045:11045..11104Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 11046..11104 +
1682586781.3238177-CDS-C-australica_Contig_1045:11202..113271682586781.3238177-CDS-C-australica_Contig_1045:11202..11327Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 11203..11327 +
1682586781.3319004-CDS-C-australica_Contig_1045:11467..115531682586781.3319004-CDS-C-australica_Contig_1045:11467..11553Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 11468..11553 +
1682586781.3428488-CDS-C-australica_Contig_1045:11656..117031682586781.3428488-CDS-C-australica_Contig_1045:11656..11703Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 11657..11703 +
1682586781.3509908-CDS-C-australica_Contig_1045:11882..124441682586781.3509908-CDS-C-australica_Contig_1045:11882..12444Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 11883..12444 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1045.3.5prot_C-australica_Contig_1045.3.5Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1045 4871..12444 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1045.3.5

>prot_C-australica_Contig_1045.3.5 ID=prot_C-australica_Contig_1045.3.5|Name=mRNA_C-australica_Contig_1045.3.5|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=1353bp
MLKNWFVTDPKQTKVTRSDERTAERAPSSSSKEAKKVKEKPPVVDAVTNG
EKGFFGLSPTIVTSASLFGDLDLKPPVEAEAKADDAGGAMSAFSFMATPA
AQGATADTSRTATPESTDNSGSASASGFSFLAPPASSLSEQQSSADAQDD
EHKAEVSKVGASAAVSSFSFMDGAVGGAQAAPDEAERQAEAVSSSEGKRS
AKGSSGSSSGSQMSAPGPMAQAKAGGHRRKRVAKKVGYAREAAAAVEASA
VDPVRPAQALVIPSPPSSPKLGAGVGGAGASPPKSSTPPRLPPREAAKET
SGMDESSLPAGDAWEKPPRRERPSPPPRGHPTPSSLEVTDNEAAVASTGV
EEQQGMVPTLSSIVGELKKATDALCARLSGLDGQRSRTQAEQQRLTKEIE
AARAELVEQECEQQRLADAEEFEAADALSTAVEQLQAGLEETQANLLELN
REEELLHTESHTGREDLLRALGTVASDLDSFTHKQGTVLGSLLSDSAKRC
EAEGRRIVEEQERLAIELGHVRREEEHLREEVEEAEAAISAQAKADIEEK
ERLQGVRSGLEKDIARLMEELDLKRQALVEAEQGLVAADAGILKVKAKYD
RQLARLKEREKLTQVSKADCEAEAAALELSRQKQSALQAEAQAGQQQFED
DLNIAGSELAAAKLLEGALTAHWGDSAAKGSKAGGGRALGELQARVVAVM
EEVEALKQDVAKSEARQVQLAEERSVLSRSLPQLELAKKAAAAAKDYKEA
ASISKQVKSVVSRQDEIAAEIEETKSCIARITSAGGKLPRKQEELEGHRQ
KVLELSKVTQQAHYLQLTDKIAQLRRTQRKIEATCKPASELRACADLLLE
MELSAMGAEAAELEARYGFTDPGSDERETEDGGEHATAPDEGNASAAAPE
SGPKELPRGHARELQELQERLDAAVAEEDFEQAALIQDQITSMEDEGVLP
GEGGLPDEGGLPAGNEREVFFTARAASEQSALAARPEEHESHEVYPESDA
PIPAADTPEAAPAIAAIASEPEAAAHDAPETAPAALGHDAQQEPEMARQG
NNEQPPPETEPEPELQDHPEQVGADARETSPEEDQPSEHPEAGAAHEGDH
EGTWDGREPQDQQAEDERPALGPTSRPEEDQPLAAPEALSAEEEEAQAVE
ADVQGMATSASGIESLSLHSTGPEWEQRNEEQQGAVAELEEVKEAAPPAA
AAGAGSSDIGDSGASGEYEEVCLSIGHHFHFSSSCLLACALNSLSHCPCQ
SGMSSQHLGLSLALALPPPSLLCARVKQLSFLASPHALLFSASLLLALPL
SATQPILTHVSCSQLHTSGDQARGSAKRHHQHLWLLVHDSRTRTQPTPGR
RQ*
back to top

mRNA from alignment at C-australica_Contig_1045:4788..12603+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1045.3.5 ID=mRNA_C-australica_Contig_1045.3.5|Name=mRNA_C-australica_Contig_1045.3.5|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=7816bp|location=Sequence derived from alignment at C-australica_Contig_1045:4788..12603+ (Chrysoparadoxa australica CS_1217)
TGGCACACCATCAATTATATAAATTGGAGTATCCCAGTTTAGCTCCAGCC GGGGAACCTGGCAGGGAGGGCGTCCACGGCACAATGCTGAAGAACTGGTT TGTTACAGATCCAAAGCAGACAAAAGTTACGCGAAGTGATGAGCGTACAG CCGAGCGGGCTCCCTCGAGCAGTAGCAAGGAGGCCAAGAAAGTCAAGGAG AAGGTAGAGGCAGTAGTAGTGCCGCTCACCCGCGTAGCAAACCCTGGATT TGAGTTTGGAGTCGACCCACAACGGCCTCTCGGTCTACTCTCCACTCCCC AAGATCCCACGAACTCTCTGAGCCCCTTCCCTCCCTAACCCCCGCTTTAT TCAGCCTCCAGTGGTGGATGCGGTCACCAATGGAGAGAAAGGGTTCTTTG GACTCAGCCCAACAATTGTGACATCAGGTGAGAGCTTTCTGGCTGGGTAG TGAGGGTAGGACCAAACTATGAAGTACCTCCTTTCAGTCAGAGCAGTCCT GATCCATCCGACATCCCACTCCCAGCCTCTCTCTTTGGCGACCTTGACTT GAAGCCTCCTGTGGAGGCCGAGGCTAAGGCAGATGACGCAGGAGGAGCAA TGAGCGCATTCTCATTCATGGCTACTCCGGCTGCCCAAGGGGCAACAGCA GATACCTCAAGAACAGCAACGCCGGAGAGCACAGACAATTCGGGCTCTGC GTCTGCGTCGGGATTCTCATTCCTTGCGCCGCCTGCTTCCTCTCTTTCGG AGCAGCAATCCTCGGTTGGCTCAGCCAAACCAACCCTACCCTGACTGAGC TCCGCTTATGTCACCTATTCTCTCTCATGCAGGCTGATGCTCAAGATGAT GAGCACAAGGCAGAAGTCTCCAAAGTGGGTGCTTCGGCAGCTGTATCCTC CTTCTCCTTCATGGATGGAGCTGTGGGAGGAGCTCAGGCAGCTCCAGATG AGGCAGAGCGACAGGTAAGAGGTGAACTGAACATGTCAGGGAGCGTGTTG GAGTGAGTGAGAAGTGAGTGAGCAGCCCTTTAGTGCTCGTTAAGTGTCGC AGACTAGTGAAACTGCTTACATGCACTGGTGACGTGCTGCCTCAACAGCT CATAATCTCCCTGTCTTTAGCCTCTCCTTGCTCTTACTAATCCAGCAAGC ATTTCCTCTTACCATCCCCTTAAAGGCTGAGGCTGTGTCCTCTAGTGAAG GCAAGAGAAGTGCCAAGGGCAGCTCTGGCTCGTCCAGTGGCAGCCAAATG AGTGCACCAGGGCCTATGGCGCAGGTACACTTGCCTTGCTCAATATACCT CCGTAGCCAGCCAAACAGCAAGCGCTTAAACCCTAACTGAGACATCCTAC TCTGCTCCCTTACCTGTTTCTTCGCTCGTGATCACTGGTCATTTTCCAGC CAAAAACCTTCCTCCCAAAACCTTTGAGCCTCTCCATCCCCCCAACTCAA TCCGAAACATACCTTTGGTCGGCTTTACTGGACCCCAGGTCATTGAGTCA CTAGCAAACGTAACACTTAGCACCTAGCACTTAATGACTTTGCCAACATA AGCTTGGTGCCTTGTCAAATCACTGAGTCACCAACAAACGTAACACGTAA CACCTAGCACTTAATGACTTTGCCAACATTAGCTCGCTGCGTTGTCAGGC CAAAGCGGGCGGACATCGGCGCAAGCGCGTGGCCAAAAAGGCAAGCCCAA GCCATAGCCGTAGCCGTGCTTCCGCGCTGCTTGAACGATTTGAACAAAGC ACTACCGCGCTGGCCTCCGCGTTTCCTGACGACACTGCCAAGGGACCAGC GTTCCACGTCACGGCAGCTCAACCCGCAGCCCGCGTAATGACATGCACCG ACTCATCCCGCCCAGCAAACACGCTGCCCTGGCCTCTGCCCACTGCACCT CATTGCATCTCGTTGGCACTCACCGGCGTCACCCCCGATCAGGTTGGCTA CGCTCGTGAAGCTGCTGCTGCTGTGGAGGCTTCTGCCGTTGATCCGGTGA GGCCTGCCCAGGCGCTTGTGATACCAAGTCCGCCGTCCAGTCCTAAGCTG GGAGCAGGCGTAGGAGGTGAGAGGTTTCTAACAAGCAGGCGTGTGATTAG TGCGGTGAATGGGAGCAGCGAGCTTGACTGTGACAGACTTATACGGCACT GCATTGCTAGCGTTTAAACCAAGTGTGTTCTTCAGCTGATTCAGTCTTAG GGATAGGATTACGGTGCGGGCTTATTTAGCTCAGCATTTGGTACCGAGCT CTGAAGTTAGCCACCCCAAGCAACTTAGCTGGTGTGTGCCTTTTCACTGA CCCAGCAACCGGCCTAGCAGGTGCTGGAGCCTCGCCACCCAAGTCATCCA CGCCGCCACGCCTGCCGCCTCGGGAAGCTGCCAAGGAAACAAGCGGGATG GATGAGAGCAGCCTCCCTGCTGGTGACGCGTGGGAAAAGCCTCCTCGCAG GGAGAGGCCCAGCCCTCCTCCTCGAGGCCACCCCACGCCATCTTCTCTTG AAGTGACCGACAATGAAGCAGCTGTTGCTAGCACAGGGGTAGAGGAGCAA CAGGGAATGGTCCCCACGCTTTCCTCCATAGTTGGGGAGCTTAAGAAGGC TACCGATGCGCTCTGCGCGAGGCTCAGTGGCCTAGACGGCCAGCGCAGCC GAACGCAGGCCGAGCAGCAGCGGCTCACGAAGGAGATAGAGGCGGCACGA GCCGAGCTGGTCGAGCAGGAGTGCGAGCAGCAGAGGCTGGCTGATGCAGA GGTGAGTGGGATCGGTTGGCTTGGTACTAACAGCACTATATGCAGTCTCT GCTGTTCGCTTCGTACGCATGGTTACTTGCCTGTTGAGTGCTCTCACGCT CTTGCGCTCTCCCACGTACCCGTCAAACGCCAGGAGTTTGAAGCAGCCGA CGCCTTGTCCACCGCGGTAGAGCAGCTTCAGGCAGGCCTTGAGGAAACGC AGGCCAACCTGCTGGAGCTGAATAGGGAAGAGGTGAAACAAAGAGCTTCC TTCCTTCAACCCTGAGCCTGAATGCCAGCCTGAATGCCAGCTTCTCCTTC TTGCTTGATTTATGCTTTTATTTCCCTTCACACCCAAGCCCCTGCCACTT TTTGACATACATCTCATCCCTCAGGAGCTGTTGCATACGGAGAGCCACAC CGGCAGAGAAGACCTTCTGCGCGCGCTGGGCACAGTGGCTAGCGATCTCG ATTCATTTACCCACAAGCAAGGGACTGTCCTAGGCTCACTGCTATCTGAC TCAGCCAAGAGGTATGCCGACCAAACCGGCTCTGTAACCAGCTCTCCAGT CACCTCTCTGCTTGGCTGTAATCATTTTTCTGAGCCCGTCATCATTTTTC ATGACCAGGTGCGAAGCCGAAGGGCGTCGAATAGTGGAGGAGCAAGAGCG TCTTGCTATTGAGCTAGGGCATGTGAGGAGGGAGGAGGAGCACCTGAGGG AAGAGGTTGAAGAAGCTGAGGCGGCCATCTCTGCCCAAGCTAAGGCTGAT ATTGAGGAGAAGGAGAGGCTGCAGGGGGTTAGATCAGGGCTTGAGAAGGA CATAGCGAGGCTGATGGAGGAGCTTGACTTGAAGCGTCAGGCTTTGGTGG AGGCGGAGCAGGGGCTGGTGGCTGCTGACGCGGGGATACTTAAGGTTAAG GCCAAGTATGACCGTCAGCTGGCTCGGCTGAAGGAACGGGAGAAGCTCAC TCAGGTGCACAGGAGATATGTGGATTGGATGATTAGATGATTAGATGGTT AGATGACTGCCTGTTGGAGCAGAGGGAATGATATGATGGGAGCTTAGTTA TCTGCTGTGTAGAGGCAGGCCTAGTAGAGTTGATGAAGTGTGAGAGTTAG GCCGCAAGAGGTGCAGACCAATTGAGGCTTGTTTGTGACAACCTCACCTC CCTTTTGCCACGGGGTTAGGTGAGCAAGGCTGACTGTGAAGCTGAAGCTG CAGCTCTGGAGCTGTCGAGGCAGAAGCAGAGCGCATTGCAGGCAGAGGCA CAAGCAGGCCAGCAGCAGTTCGAGGTGAGTGAGAGCTGAGAGAGCTCCCA ACCATCCTTCGTGACACGTAAGAGCCACCACCCCCTCTAATGCACTCCGG CTCTTGTGCGCTCTGTTAGGATGACCTGAACATAGCAGGAAGTGAGCTTG CCGCCGCTAAACTGCTGGAGGGTGCTCTCACCGCTCACTGGGGTGACAGC GCTGCCAAGGGCAGCAAAGCTGGAGGAGGGAGAGCTCTCGGCGAACTGCA GGCCCGTGTGGTTGCAGTCATGGAGGAAGTGGAGGCTTTGAAGCAGGTTA GAAAAAACTGTCCACGTACCTCCACTTTGCCTTGGCAGCTTCCCTCCTTT CATGGTCATTATTAGATGCCTGTTTTGTAATCTAATCTTGGTGGTTCTGA CACGTCACAGGATGTGGCCAAGTCAGAGGCCAGGCAGGTCCAACTAGCGG AAGAGAGGTCCGTATTATCCAGGAGCTTGCCCCAGCTCGAGCTGGCGAAG AAGGCTGCAGCAGCTGCCAAGGACTACAAGGAAGCAGCCAGCATCAGCAA GCAAGTGAAGAGCGTGGTCTCCAGGCAGGATGAGATAGCTGCTGAGATAG AGGAGACCAAGTCATGTATAGCACGCATTACCAGTGCCGGTGGGAAGTTG CCGCGTAAGCAGGAGGAGCTGGAGGGCCACCGGCAGAAGGTGCTGGAGCT GAGCAAGGTTACTCAGCAGGCGCATTACCTGCAGCTGACAGACAAGGTAC CGGCTCATCCATCCCAGTAGTAGCACAGTAGTACCTACCATAGCAGCAGA AGAGTCGTAGCAGTGTTAATGGCAGAGCGGGGGTGCACTCGACTTGTTGC AGGCCAACTTTCCTCTCACTAGTAGTTGCCTGCTCCTGCAACCTCAGATT GCCCAGTTACGGAGAACACAACGCAAGATTGAGGCCACCTGCAAACCAGC TAGTGAGCTCAGGGCTTGTGCAGACTTGCTGTTGGAGATGGAGCTCTCTG CCATGGGGGCAGAGGCTGCAGAGCTAGAGGCTCGGTATGGTTTCACTGAC CCTGGGTCTGATGAGCGGGAGACCGAAGATGGGGGAGAGCATGCAACTGC CCCGGATGAAGGAAATGCATCAGGTGGGGTTAATCCAGGGCTCGCTTGCC TCAACTGAGTATGTTAAGCGTTATTTTACCAAGCCTCACATGACCTGCTT CGATCATACCGCAGCTGCTGCGCCGGAATCTGGGCCTAAGGAGCTGCCGA GAGGGCATGCGCGAGAGCTGCAGGAGCTGCAAGAGCGCCTTGATGCAGCT GTGGCTGAGGAAGACTTTGAGCAGGCTGCTTTGATCCAGGATCAGATTAC TAGCATGGAAGACGAGGGTGTGCTCCCAGGTGAGGGTGGGCTCCCAGATG AGGGCGGGCTCCCTGCAGGGAATGAAAGAGAGGTGAGCAGCTGTCCCATT GCATCAGTCGCGTCTTTATTGGATGGTGTAACATGTAATTGCTTTGTGTG CGGTGCAGCTATAGGTGGCCTTTCTCTGGTTAAGCCTTATGCTCTTACGT TACAGTTTACCTTGTGACTTGATTCATTCCTTGCTTGCCAGGTTTTCTTC ACCGCACGTGCTGCATCAGAGCAGTCAGCCCTAGCAGCCAGACCAGAAGA GCATGAATCACACGAAGGTGCTGCCTCCCACAAAACCAGCTCTCTCATGC GTGCTCTCAGGCATGCTTTGCAACCGTTCCTGCATACAACCTTCCTTCTT CACTCACTCAAAGCACCAAAGCTTTGGCACGGCGTGCGTAATACTGCTGA GGCCTTCTTATCAAAGCACTCATCTTTGCGCTCACGCATGCATGTTCCCT CCCCTTTAGTCTACCCAGAATCGGATGCTCCAATCCCAGCTGCCGACACA CCTGAAGCTGCTCCAGCTATAGCAGCTATAGCAAGGTGACCTCCAAGCCA ACACTATCCTACCCACAAGCATCATTGGGCCTTCCAGGTTAACGTTTCAT TTCACTCACGCTACCTGCTCCCCACTGCTGCACCAGCGAGCCAGAGGCAG CAGCCCATGACGCGCCAGAGACAGCCCCCGCTGCCCTAGGGCATGATGCT CAGCAGGAGCCGGAGATGGCTCGGCAGGGTAACAACGAGCAACCTCCGCC AGAAACTGAGGTGAGAAAGAGATAGAGATATAGCTAGTGTTAAGAGCTTG CCTTCCCAACTCACATGCTCACACACTCACTGGTAGTGTCATCACTCCTC TCTCTCAGCCGGAGCCTGAGCTTCAGGACCACCCTGAGCAGGTGGGCGCG GATGCACGAGAAACCAGGTAATGTTAACTGTTACAGTGCTCCCTTCTCTC TTTCATCTCACACGTATGAACCAGCCAGCCAGCCTGCTAGCCCTTACAGC GAGCCACTTGAACAGTCCTGAAGAGGACCAGCCGTCTGAGCACCCTGAGG CTGGGGCAGCCCACGAGGGGGACCATGAGGGCACATGGGACGGTAGGGAG CCACAGGATCAGCAGGCTGAGGACGAGAGACCTGCACTTGGTGAGTTGGA TCCCTTTAGCTTTGCATTCACAAGCTTTACTTCCCCTCCAAGAGAGTCTT CTCAGGCCTTTTGCCTGGGGATTGCTTTGTCTATCTAGCCTTGTTTGACC TGACCCGAGTCCTCGTTCTTGCTGCTAAAGGTCCCACCAGTCGGCCTGAA GAAGATCAACCGTTAGCAGCACCAGAAGCTCTGTCAGCAGAGGAAGAAGA AGCCCAAGCGGTGGAGGTCCTGAGGATTGCTTACTCTATTGAACACGATT GAACCGCTCCCACTTCTATTGACGTGAGCTGCAGCTAATTGCGTTCATAT GCGGTGCCTTATTTTACAGGCTGACGTGCAGGGCATGGCAACGAGTGCAT CGGGGATAGAATCATTGTAAGCACCACCCACCCGGCTGTATGCCATCCAT CATCCACTCCAACCCTGAGAAAAATGCGCAACAGCAACAAGAGCCACTTT TGACTCTGTTTCTACCACGTGACTTCATGATCTCCGGGATAGTCTGCCTG CCTCACTATGCTGCTTTGCTCTTGCTCATCTCTTGTTACCGCCAGGTCAC TTCATTCAACTGGGCCGGAGTGGGAGCAGCGGAATGAAGAACAACAAGGG GCAGTGGCCGAATTGGAGGAAGTGAAAGAGGCAGCACCACCAGCTGCAGC TGCAGGAGCAGGTTCAAGTGATATAGGAGATAGTGGAGCTAGTGGGGAGT ATGAGGAGGTATGCCTATCCATAGGCCACCACTTTCACTTTTCTTCATCA TGCTTGCTTGCTTGCGCTCTCAACAGCTTATCTCACTGTCCCTGCCAGTC TGGCATGTCATCACAGCATCTTGGTCTCAGCCTAGCCCTAGCTCTACCCC CTCCTTCTCTCCTTTGTGCACGCGTCAAACAGCTTTCCTTCCTTGCATCA CCCCATGCTCTTCTTTTCTCTGCCAGCTTGCTTCTCGCCCTTCCCTTGTC AGCAACACAGCCGATACTCACACATGTCAGCTGCTCACAACTGCACACCT CAGGAGACCAAGCAAGAGGAAGTGCCAAGCGTCATCACCAGCACCTCTGG CTTCTCGTTCATGACAGCAGGACCAGGACCCAGCCCACCCCCGGACGAAG ACAATGAGGATCCTGAGCTGAATGCTGCGTGATCATTGGGACCGTCCAAT TGGTCTGTGGCTGCTCTCACGAATCTGAATGATGAGGATCTACGAGAGCT TTTTGTGGCTGCTGTAGCAGGAAAGCAAGAGGGGTCTTAAGAAACAAACC CACAAATGTATTTACT
back to top

Coding sequence (CDS) from alignment at C-australica_Contig_1045:4788..12603+

>mRNA_C-australica_Contig_1045.3.5 ID=mRNA_C-australica_Contig_1045.3.5|Name=mRNA_C-australica_Contig_1045.3.5|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=4059bp|location=Sequence derived from alignment at C-australica_Contig_1045:4788..12603+ (Chrysoparadoxa australica CS_1217)
ATGCTGAAGAACTGGTTTGTTACAGATCCAAAGCAGACAAAAGTTACGCG
AAGTGATGAGCGTACAGCCGAGCGGGCTCCCTCGAGCAGTAGCAAGGAGG
CCAAGAAAGTCAAGGAGAAGCCTCCAGTGGTGGATGCGGTCACCAATGGA
GAGAAAGGGTTCTTTGGACTCAGCCCAACAATTGTGACATCAGCCTCTCT
CTTTGGCGACCTTGACTTGAAGCCTCCTGTGGAGGCCGAGGCTAAGGCAG
ATGACGCAGGAGGAGCAATGAGCGCATTCTCATTCATGGCTACTCCGGCT
GCCCAAGGGGCAACAGCAGATACCTCAAGAACAGCAACGCCGGAGAGCAC
AGACAATTCGGGCTCTGCGTCTGCGTCGGGATTCTCATTCCTTGCGCCGC
CTGCTTCCTCTCTTTCGGAGCAGCAATCCTCGGCTGATGCTCAAGATGAT
GAGCACAAGGCAGAAGTCTCCAAAGTGGGTGCTTCGGCAGCTGTATCCTC
CTTCTCCTTCATGGATGGAGCTGTGGGAGGAGCTCAGGCAGCTCCAGATG
AGGCAGAGCGACAGGCTGAGGCTGTGTCCTCTAGTGAAGGCAAGAGAAGT
GCCAAGGGCAGCTCTGGCTCGTCCAGTGGCAGCCAAATGAGTGCACCAGG
GCCTATGGCGCAGGCCAAAGCGGGCGGACATCGGCGCAAGCGCGTGGCCA
AAAAGGTTGGCTACGCTCGTGAAGCTGCTGCTGCTGTGGAGGCTTCTGCC
GTTGATCCGGTGAGGCCTGCCCAGGCGCTTGTGATACCAAGTCCGCCGTC
CAGTCCTAAGCTGGGAGCAGGCGTAGGAGGTGCTGGAGCCTCGCCACCCA
AGTCATCCACGCCGCCACGCCTGCCGCCTCGGGAAGCTGCCAAGGAAACA
AGCGGGATGGATGAGAGCAGCCTCCCTGCTGGTGACGCGTGGGAAAAGCC
TCCTCGCAGGGAGAGGCCCAGCCCTCCTCCTCGAGGCCACCCCACGCCAT
CTTCTCTTGAAGTGACCGACAATGAAGCAGCTGTTGCTAGCACAGGGGTA
GAGGAGCAACAGGGAATGGTCCCCACGCTTTCCTCCATAGTTGGGGAGCT
TAAGAAGGCTACCGATGCGCTCTGCGCGAGGCTCAGTGGCCTAGACGGCC
AGCGCAGCCGAACGCAGGCCGAGCAGCAGCGGCTCACGAAGGAGATAGAG
GCGGCACGAGCCGAGCTGGTCGAGCAGGAGTGCGAGCAGCAGAGGCTGGC
TGATGCAGAGGAGTTTGAAGCAGCCGACGCCTTGTCCACCGCGGTAGAGC
AGCTTCAGGCAGGCCTTGAGGAAACGCAGGCCAACCTGCTGGAGCTGAAT
AGGGAAGAGGAGCTGTTGCATACGGAGAGCCACACCGGCAGAGAAGACCT
TCTGCGCGCGCTGGGCACAGTGGCTAGCGATCTCGATTCATTTACCCACA
AGCAAGGGACTGTCCTAGGCTCACTGCTATCTGACTCAGCCAAGAGGTGC
GAAGCCGAAGGGCGTCGAATAGTGGAGGAGCAAGAGCGTCTTGCTATTGA
GCTAGGGCATGTGAGGAGGGAGGAGGAGCACCTGAGGGAAGAGGTTGAAG
AAGCTGAGGCGGCCATCTCTGCCCAAGCTAAGGCTGATATTGAGGAGAAG
GAGAGGCTGCAGGGGGTTAGATCAGGGCTTGAGAAGGACATAGCGAGGCT
GATGGAGGAGCTTGACTTGAAGCGTCAGGCTTTGGTGGAGGCGGAGCAGG
GGCTGGTGGCTGCTGACGCGGGGATACTTAAGGTTAAGGCCAAGTATGAC
CGTCAGCTGGCTCGGCTGAAGGAACGGGAGAAGCTCACTCAGGTGAGCAA
GGCTGACTGTGAAGCTGAAGCTGCAGCTCTGGAGCTGTCGAGGCAGAAGC
AGAGCGCATTGCAGGCAGAGGCACAAGCAGGCCAGCAGCAGTTCGAGGAT
GACCTGAACATAGCAGGAAGTGAGCTTGCCGCCGCTAAACTGCTGGAGGG
TGCTCTCACCGCTCACTGGGGTGACAGCGCTGCCAAGGGCAGCAAAGCTG
GAGGAGGGAGAGCTCTCGGCGAACTGCAGGCCCGTGTGGTTGCAGTCATG
GAGGAAGTGGAGGCTTTGAAGCAGGATGTGGCCAAGTCAGAGGCCAGGCA
GGTCCAACTAGCGGAAGAGAGGTCCGTATTATCCAGGAGCTTGCCCCAGC
TCGAGCTGGCGAAGAAGGCTGCAGCAGCTGCCAAGGACTACAAGGAAGCA
GCCAGCATCAGCAAGCAAGTGAAGAGCGTGGTCTCCAGGCAGGATGAGAT
AGCTGCTGAGATAGAGGAGACCAAGTCATGTATAGCACGCATTACCAGTG
CCGGTGGGAAGTTGCCGCGTAAGCAGGAGGAGCTGGAGGGCCACCGGCAG
AAGGTGCTGGAGCTGAGCAAGGTTACTCAGCAGGCGCATTACCTGCAGCT
GACAGACAAGATTGCCCAGTTACGGAGAACACAACGCAAGATTGAGGCCA
CCTGCAAACCAGCTAGTGAGCTCAGGGCTTGTGCAGACTTGCTGTTGGAG
ATGGAGCTCTCTGCCATGGGGGCAGAGGCTGCAGAGCTAGAGGCTCGGTA
TGGTTTCACTGACCCTGGGTCTGATGAGCGGGAGACCGAAGATGGGGGAG
AGCATGCAACTGCCCCGGATGAAGGAAATGCATCAGCTGCTGCGCCGGAA
TCTGGGCCTAAGGAGCTGCCGAGAGGGCATGCGCGAGAGCTGCAGGAGCT
GCAAGAGCGCCTTGATGCAGCTGTGGCTGAGGAAGACTTTGAGCAGGCTG
CTTTGATCCAGGATCAGATTACTAGCATGGAAGACGAGGGTGTGCTCCCA
GGTGAGGGTGGGCTCCCAGATGAGGGCGGGCTCCCTGCAGGGAATGAAAG
AGAGGTTTTCTTCACCGCACGTGCTGCATCAGAGCAGTCAGCCCTAGCAG
CCAGACCAGAAGAGCATGAATCACACGAAGTCTACCCAGAATCGGATGCT
CCAATCCCAGCTGCCGACACACCTGAAGCTGCTCCAGCTATAGCAGCTAT
AGCAAGCGAGCCAGAGGCAGCAGCCCATGACGCGCCAGAGACAGCCCCCG
CTGCCCTAGGGCATGATGCTCAGCAGGAGCCGGAGATGGCTCGGCAGGGT
AACAACGAGCAACCTCCGCCAGAAACTGAGCCGGAGCCTGAGCTTCAGGA
CCACCCTGAGCAGGTGGGCGCGGATGCACGAGAAACCAGTCCTGAAGAGG
ACCAGCCGTCTGAGCACCCTGAGGCTGGGGCAGCCCACGAGGGGGACCAT
GAGGGCACATGGGACGGTAGGGAGCCACAGGATCAGCAGGCTGAGGACGA
GAGACCTGCACTTGGTCCCACCAGTCGGCCTGAAGAAGATCAACCGTTAG
CAGCACCAGAAGCTCTGTCAGCAGAGGAAGAAGAAGCCCAAGCGGTGGAG
GCTGACGTGCAGGGCATGGCAACGAGTGCATCGGGGATAGAATCATTGTC
ACTTCATTCAACTGGGCCGGAGTGGGAGCAGCGGAATGAAGAACAACAAG
GGGCAGTGGCCGAATTGGAGGAAGTGAAAGAGGCAGCACCACCAGCTGCA
GCTGCAGGAGCAGGTTCAAGTGATATAGGAGATAGTGGAGCTAGTGGGGA
GTATGAGGAGGTATGCCTATCCATAGGCCACCACTTTCACTTTTCTTCAT
CATGCTTGCTTGCTTGCGCTCTCAACAGCTTATCTCACTGTCCCTGCCAG
TCTGGCATGTCATCACAGCATCTTGGTCTCAGCCTAGCCCTAGCTCTACC
CCCTCCTTCTCTCCTTTGTGCACGCGTCAAACAGCTTTCCTTCCTTGCAT
CACCCCATGCTCTTCTTTTCTCTGCCAGCTTGCTTCTCGCCCTTCCCTTG
TCAGCAACACAGCCGATACTCACACATGTCAGCTGCTCACAACTGCACAC
CTCAGGAGACCAAGCAAGAGGAAGTGCCAAGCGTCATCACCAGCACCTCT
GGCTTCTCGTTCATGACAGCAGGACCAGGACCCAGCCCACCCCCGGACGA
AGACAATGA
back to top