mRNA_C-australica_Contig_1045.2.7 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1045.2.7
Unique NamemRNA_C-australica_Contig_1045.2.7
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1045.2.7 vs. uniprot
Match: A0A835YU62_9STRA (Tocopherol polyprenyltransferase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU62_9STRA)

HSP 1 Score: 399 bits (1026), Expect = 6.310e-134
Identity = 213/339 (62.83%), Postives = 247/339 (72.86%), Query Frame = 2
Query:  200 GKDLSQRAKAVYDFSRPHTIRGTILASFTGVARALIEQPAAISLDLVPRAVLGLVALLLGNAFIVGINQIYDVDIDKVNKPFLPMAAGKMSQRFAWGVVVFSATMGPAIGLSPSRHLVMMSTKPNASCAALSLLSVFKNFSPLIIKLYMFGLTIGALYSVPPFQFKRIPILAGLTIACVRGFLLNFGVYYAVKEALGQSFSWNPAVIFLARFMTVFAGVIAVTKDLPDTEGDRFVSNCPTACSRMYNVSTFATRRGVSWTAKAASVVLGLNYVSAIVQGAISPAGSFNRKLMIGAHGAFILYLANSLRRLEADSKESIKAFYGRIWDLFYLEYAIYPFI 1216
            GK +   AK++Y F+RPHTIRGTILAS TGVARALIE P A+ L L+PRA++G++ALLLGNA+IVGINQIYDVD+D++NKPFLPMAAG+M ++ AW VV+ S   GP I                          V + FSP+I+ LY FGL IG LYSVPPFQ KR P LAGLTIACVRGFLLNFGVYYAVKEALG  F WN AVIFLARFMTVFAGVIAVTKDLPD EGD+            YN+STFA R GV+  A AA +VLGLNYVSAIV+ A+ PA  FN+ +MI  H AF LYL  +  +L+ DSKES+KAFY RIWDLFYLEY +YPFI
Sbjct:   18 GKGVRATAKSIYKFTRPHTIRGTILASLTGVARALIETPTAVELRLIPRAIMGMLALLLGNAYIVGINQIYDVDVDRINKPFLPMAAGEMGKKAAWAVVLTSMICGPLI--------------------------VSQLFSPVIMGLYCFGLVIGGLYSVPPFQTKRNPFLAGLTIACVRGFLLNFGVYYAVKEALGIPFKWNRAVIFLARFMTVFAGVIAVTKDLPDVEGDK-----------QYNISTFAVRAGVARIANAACIVLGLNYVSAIVEAALVPA--FNKAIMIAGHSAFALYLYRARTKLQPDSKESVKAFYARIWDLFYLEYLLYPFI 317          
BLAST of mRNA_C-australica_Contig_1045.2.7 vs. uniprot
Match: A0A6H5JNV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNV9_9PHAE)

HSP 1 Score: 385 bits (990), Expect = 4.570e-127
Identity = 202/333 (60.66%), Postives = 246/333 (73.87%), Query Frame = 2
Query:  227 AVYDFSRPHTIRGTILASFTGVARALIEQPAAISLDLVPRAVLGLVALLLGNAFIVGINQIYDVDIDK---VNKPFLPMAAGKMSQRFAWGVVVFSATMGPAIGLSPSRHLVMMSTKPNASCAALSLLSVFKNFSPLIIKLYMFGLTIGALYSVPPFQFKRIPILAGLTIACVRGFLLNFGVYYAVKEALGQSFSWNPAVIFLARFMTVFAGVIAVTKDLPDTEGDRFVSNCPTACSRMYNVSTFATRRGVSWTAKAASVVLGLNYVSAIVQGAISPAGSFNRKLMIGAHGAFILYLANSLRRLEADSKESIKAFYGRIWDLFYLEYAIYPFI 1216
            AVY F+RPHTI+GTILAS TGVARALIE P AISLDLVP+AVLGL++LLLGNAFIVGINQIYD+DIDK   +NKP LP+A+G++S+R AW +V+ S   GPAI                          V+ +FSPLI +LY  GL +G LYSVPPF  KR P+ AGL IACVRGFLLNFGVYYAV+EALG +F WNP V+FLARFM VFAGVIAV KDLPD +GD+            Y +STFA++RGV +TA+AAS VL +NY+SAI +GA+SPAG+FNR++M+G H A +  L  ++R+L  D + SIK FY RIWDLFYLEYA+YPF+
Sbjct:  118 AVYRFTRPHTIKGTILASVTGVARALIESPNAISLDLVPKAVLGLLSLLLGNAFIVGINQIYDIDIDKANHINKPELPVASGEISKRLAWALVLVSLAAGPAI--------------------------VYTSFSPLIFRLYSLGLLVGGLYSVPPFTLKRFPVAAGLIIACVRGFLLNFGVYYAVREALGVAFRWNPVVLFLARFMVVFAGVIAVAKDLPDVKGDK-----------EYKISTFASKRGVKFTARAASAVLAVNYLSAIAEGALSPAGTFNRRVMVGGHSALLAILGLAIRKLVPDDQGSIKRFYLRIWDLFYLEYAMYPFM 413          
BLAST of mRNA_C-australica_Contig_1045.2.7 vs. uniprot
Match: A0A7S3XLT2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLT2_HETAK)

HSP 1 Score: 380 bits (977), Expect = 1.310e-126
Identity = 210/348 (60.34%), Postives = 243/348 (69.83%), Query Frame = 2
Query:  182 PEQPSAGKDLSQ---RAKAVYDFSRPHTIRGTILASFTGVARALIEQPAAISLDLVPRAVLGLVALLLGNAFIVGINQIYDVDIDKVNKPFLPMAAGKMSQRFAWGVVVFSATMGPAIGLSPSRHLVMMSTKPNASCAALSLLSVFKNFSPLIIKLYMFGLTIGALYSVPPFQFKRIPILAGLTIACVRGFLLNFGVYYAVKEALGQSFSWNPAVIFLARFMTVFAGVIAVTKDLPDTEGDRFVSNCPTACSRMYNVSTFATRRGVSWTAKAASVVLGLNYVSAIVQGAISPAGSFNRKLMIGAHGAFILYLANSLRRLEADSKESIKAFYGRIWDLFYLEYAIYPFI 1216
            PE  SA +D +    R +A+Y F+RPHTIRGTILAS TGVARALIE P  I+L LVPRA LG+ ALL+GNA+IVGINQIYDVDIDKVNKPFLP+AAG++ +R AW VV  SA +G  I                          V + F P+I++LY FGL IG LYSVPPFQFKR P+LAGLTIACVRGFLLNFGVYYAVKEALG  F WNP VIFLARFMTVFA VIA+TKDLPD  GD+            Y VSTFATR GV   AK +S+VLG NYVSA++  A +PA  F + +M+ AH  F  YL  S + L+A+S  SIK FYGRIWDLFY +Y IYPFI
Sbjct:    1 PEPLSAVEDTAVGAGRLRALYKFTRPHTIRGTILASVTGVARALIEDPQTIALSLVPRAALGMAALLMGNAYIVGINQIYDVDIDKVNKPFLPIAAGELGKRTAWAVVAGSAALGTFI--------------------------VSRCFGPVILRLYAFGLLIGGLYSVPPFQFKRNPLLAGLTIACVRGFLLNFGVYYAVKEALGIPFRWNPTVIFLARFMTVFAMVIAITKDLPDIAGDK-----------KYGVSTFATRLGVRKVAKYSSLVLGANYVSAVLNAAFAPAHHFRKPVMVVAHTLFAGYLFKSYKELDAESTASIKQFYGRIWDLFYAQYCIYPFI 311          
BLAST of mRNA_C-australica_Contig_1045.2.7 vs. uniprot
Match: A0A7S2UTD4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTD4_9STRA)

HSP 1 Score: 361 bits (927), Expect = 6.060e-118
Identity = 195/331 (58.91%), Postives = 233/331 (70.39%), Query Frame = 2
Query:  224 KAVYDFSRPHTIRGTILASFTGVARALIEQPAAISLDLVPRAVLGLVALLLGNAFIVGINQIYDVDIDKVNKPFLPMAAGKMSQRFAWGVVVFSATMGPAIGLSPSRHLVMMSTKPNASCAALSLLSVFKNFSPLIIKLYMFGLTIGALYSVPPFQFKRIPILAGLTIACVRGFLLNFGVYYAVKEALGQSFSWNPAVIFLARFMTVFAGVIAVTKDLPDTEGDRFVSNCPTACSRMYNVSTFATRRGVSWTAKAASVVLGLNYVSAIVQGAISPAGSFNRKLMIGAHGAFILYLANSLRRLEADSKESIKAFYGRIWDLFYLEYAIYPFI 1216
            +++Y F+RPHTIRGTILAS TGVARALIE P  ISL+LVPRAVLGLVALL+GNA+IVGINQI+DVD+DKVNKPFLP+AAG+++++ AW +V     +GP I                   AAL       NF  LI+ LY+FGL IG LYSVPPFQ KR PI+AGLTIACVRGFLLNFGVYYAVK+AL   F WN +VIFLARFMTVFAGVIA+TKDLPD EGDR            YN++T   R+GV   AK A+ VL  NY+SAIV G ++PA  FN+ +M+  H  F ++L    + L A S  S+K FY  IWDLFY EY +YPFI
Sbjct:   94 RSMYKFTRPHTIRGTILASCTGVARALIEHPTQISLNLVPRAVLGLVALLMGNAYIVGINQIFDVDVDKVNKPFLPIAAGELTKKQAWMLVAGCGLLGPLI-------------------AAL-------NFGGLILGLYLFGLVIGTLYSVPPFQTKRFPIIAGLTIACVRGFLLNFGVYYAVKQALNIPFQWNASVIFLARFMTVFAGVIAITKDLPDVEGDR-----------KYNINTLTVRKGVPAVAKLATGVLLANYISAIVNGIVAPAQQFNKVVMVSGHALFSVWLIKLYKDLNASSTTSVKKFYKGIWDLFYAEYCLYPFI 387          
BLAST of mRNA_C-australica_Contig_1045.2.7 vs. uniprot
Match: A0A6U3TIV9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3TIV9_9STRA)

HSP 1 Score: 346 bits (887), Expect = 7.510e-112
Identity = 198/356 (55.62%), Postives = 235/356 (66.01%), Query Frame = 2
Query:  158 MSDAGSTMPEQPSA-GKDLSQRAKAVYDFSRPHTIRGTILASFTGVARALIEQPAA--ISLDLVPRAVLGLVALLLGNAFIVGINQIYDVDIDKVNKPFLPMAAGKMSQRFAWGVVVFSATMGPAIGLSPSRHLVMMSTKPNASCAALSLLSVFKNFSPLIIKLYMFGLTIGALYSVPPFQFKRIPILAGLTIACVRGFLLNFGVYYAVKEALGQSFSWNPAVIFLARFMTVFAGVIAVTKDLPDTEGDRFVSNCPTACSRMYNVSTFATRRGVSWTAKAASVVLGLNYVSAIVQGAISPAGSFNRKLMIGAHGAFILYLANSLRRLEADSKESIKAFYGRIWDLFYLEYAIYPFI 1216
            MS A S+  E   A G  +S   KAVY F RPHTIRGTILAS TGVARAL E P+    +  L+P AV G++ALL GNAFIVGINQIYDVDIDKVNKPFLP+AAG++S R AW +V+ SA  GP I                          V+  FS +I  LYMFG T+G LYSVPPF+ KR P+ AGL+IA  RGFLLNFGVYYA +EALG SF WNPAV FLARFMTV+AGVIAVTKDLPD EGD+            + + T +TR GVS  AK A+ +L  NY  A+    ++P G+F+R  M G+H      LA S R+L+ +S +SIKAFY RIWDLFYLEY +YPFI
Sbjct:   74 MSAASSSGVESGGASGTGVSGGLKAVYKFLRPHTIRGTILASCTGVARALTELPSKSLFTWALLPNAVAGMLALLFGNAFIVGINQIYDVDIDKVNKPFLPVAAGELSTRAAWALVITSAVCGPLI--------------------------VYHLFSKVIFGLYMFGTTVGGLYSVPPFRLKRFPVAAGLSIAICRGFLLNFGVYYAAREALGLSFVWNPAVAFLARFMTVYAGVIAVTKDLPDIEGDK-----------KFEIETLSTRYGVSLIAKVATGLLLANYAGAVATALLAPPGTFHRAFMAGSHILAGTVLAVSARKLDPNSMDSIKAFYKRIWDLFYLEYCLYPFI 392          
BLAST of mRNA_C-australica_Contig_1045.2.7 vs. uniprot
Match: W7TS50_9STRA (Tocopherol polyprenyltransferase-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS50_9STRA)

HSP 1 Score: 337 bits (865), Expect = 2.110e-108
Identity = 186/344 (54.07%), Postives = 226/344 (65.70%), Query Frame = 2
Query:  191 PSAGKDLSQRAKAVYDFSRPHTIRGTILASFTGVARALIEQPAAIS--LDLVPRAVLGLVALLLGNAFIVGINQIYDVDIDKVNKPFLPMAAGKMSQRFAWGVVVFSATMGPAIGLSPSRHLVMMSTKPNASCAALSLLSVFKNFSPLIIKLYMFGLTIGALYSVPPFQFKRIPILAGLTIACVRGFLLNFGVYYAVKEALGQSFSWNPAVIFLARFMTVFAGVIAVTKDLPDTEGDRFVSNCPTACSRMYNVSTFATRRGVSWTAKAASVVLGLNYVSAIVQGAISPAGSFNRKLMIGAHGAFILYLANSLRRLEADSKESIKAFYGRIWDLFYLEYAIYPFI 1216
            PS    L  R  A+Y F+RPHTIRGTILAS  GV R  +E P A +  L  +PRA+LGL+ALL GN FIVGINQIYDV+IDKVNKPFLP+AA +M+ + AW VV+ +   G AI  S                           F+PLI  +Y  G+  G LYSVPPF FKR P++A  TIA VRGF LNFGVYYAV+EALG  F+WNP V+F+ RFMT+FAGVIAV+KDLPDTEGD+            YNV TFATR GV   A+ A+ VL LNY+SAI QG ++P+G+F + +M+G H      L    ++LE DS  SIKAFY  IWDLFYLEYA+YPF+
Sbjct:   96 PSKQGGLRDRLDALYRFTRPHTIRGTILASLMGVFRCFLEHPKAFANPLQPMPRAILGLLALLCGNVFIVGINQIYDVEIDKVNKPFLPLAAQRMTGKAAWAVVLAAGAGGLAITKS--------------------------FFTPLIFNMYAAGIVAGTLYSVPPFYFKRFPLIAAATIAFVRGFSLNFGVYYAVREALGIPFAWNPIVLFITRFMTIFAGVIAVSKDLPDTEGDK-----------KYNVRTFATRVGVKNMARGAAGVLFLNYLSAIAQGVVNPSGAFRQWVMVGGHTVLAALLIQRYKKLEPDSLASIKAFYKSIWDLFYLEYALYPFL 402          
BLAST of mRNA_C-australica_Contig_1045.2.7 vs. uniprot
Match: A0A7S2Y379_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y379_9STRA)

HSP 1 Score: 335 bits (860), Expect = 7.570e-108
Identity = 190/365 (52.05%), Postives = 237/365 (64.93%), Query Frame = 2
Query:  152 LRMSDAGSTMPEQPSAGKDLSQ------RAKAVYDFSRPHTIRGTILASFTGVARALIEQPAAISLD----LVPRAVLGLVALLLGNAFIVGINQIYDVDIDKVNKPFLPMAAGKMSQRFAWGVVVFSATMGPAIGLSPSRHLVMMSTKPNASCAALSLLSVFKNFSPLIIKLYMFGLTIGALYSVPPFQFKRIPILAGLTIACVRGFLLNFGVYYAVKEALGQSFSWNPAVIFLARFMTVFAGVIAVTKDLPDTEGDRFVSNCPTACSRMYNVSTFATRRGVSWTAKAASVVLGLNYVSAIVQGAISPAGSFNRKLMIGAHGAFILYLANSLRRLEADSKESIKAFYGRIWDLFYLEYAIYPFI 1216
            L MS  G   PE     ++ +Q      R KA+Y F+RPHTIRGTILASF G  RAL++ P A++      ++PRA +G+ ALLLGNAFIVGINQIYD DIDK+NKPFLP+A+G+MS+RFAW  VVFS  +GP I                          V K F PL+ KLY FGL +G +YSVPP + K+ PILAGLTIA VRGFLLNFGVY+AVK+A+G +FSW+P V F+ARFMT+FA VIA+TKDLPD EGD+            YN+ TFAT+ GV   AK A+V L +NY+ A+  G ++  G+F    MIG H A    L    R+LE DS +SIK +Y  IWDLFY+EYA+Y  I
Sbjct:   61 LSMSVEGDFDPEALEKAREEAQSGSVKARVKALYKFTRPHTIRGTILASFAGTTRALLDTPGALTNPNWGIMLPRAFVGMFALLLGNAFIVGINQIYDEDIDKMNKPFLPVASGEMSKRFAWLAVVFSGGVGPVI--------------------------VKKFFPPLLFKLYSFGLFLGLVYSVPPIRTKQNPILAGLTIATVRGFLLNFGVYFAVKDAVGAAFSWSPKVSFIARFMTMFASVIAITKDLPDVEGDK-----------AYNIETFATKVGVGRIAKGATVCLMVNYIHALATGLLAKPGTFKMIPMIGGHLAGAAILLARFRQLEPDSIKSIKLYYKHIWDLFYMEYALYTLI 388          
BLAST of mRNA_C-australica_Contig_1045.2.7 vs. uniprot
Match: A0A1Z5KQI4_FISSO (Homogentisate solanesyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQI4_FISSO)

HSP 1 Score: 335 bits (859), Expect = 1.220e-107
Identity = 188/368 (51.09%), Postives = 239/368 (64.95%), Query Frame = 2
Query:  164 DAGSTMPEQPSAGKDLSQRAKAVYDFSRPHTIRGTILASFTGVARALIEQPAAISLD----LVPRAVLGLVALLLGNAFIVGINQIYDVDIDKVNKPFLPMAAGKMSQRFAWGVVVFSATMGPAIGLSPSRHLVMMSTKPNASCAALSLLSVFKNFSPLIIKLYMFGLTIGALYSVPPFQFKRIPILAGLTIACVRGFLLNFGVYYAVKEALGQSFSWNPAVIFLARFMTVFAGVIAVTKDLPDTEGDRF-------VSNCPTACSRM------YNVSTFATRRGVSWTAKAASVVLGLNYVSAIVQGAISPAGSFNRKLMIGAHGAFILYLANSLRRLEADSKESIKAFYGRIWDLFYLEYAIYPFI 1216
            +A S   E+ +AG  +  R +A+Y F+RPHTIRGTIL S  G  RAL++ P +I+      ++PRA +G+VALLLGNAFIVGINQIYD DIDK+NKPFLP+A+G+MS+RFAW  VV S   GP +                          V K F PL+ KLY FG+ +GA+YS+PP + K+ P+LAGLTIA VRGFLLNFGVYYAVK+ALG SFSW+P V F+ARFMT FA VIA+TKDLPD EGD+        +S+  + C+ +      Y + TFAT+ GV+  AK A+  L LNY+ A+  G + PAG F    MIG H A    L    R+LEADS +S+K +Y  IWDLFYLEY +Y  I
Sbjct:   52 EAISRAKEEAAAGS-MKARLRALYKFTRPHTIRGTILGSIAGTTRALLDTPGSIASANWGIMLPRAFIGMVALLLGNAFIVGINQIYDEDIDKMNKPFLPVASGEMSKRFAWIAVVVSFLSGPLL--------------------------VKKFFPPLLFKLYSFGIFLGAIYSIPPVRTKKNPVLAGLTIATVRGFLLNFGVYYAVKDALGASFSWSPKVAFIARFMTTFASVIAITKDLPDVEGDKVSAKLRNALSSVHSVCTNIVGDIKAYQIETFATKIGVARIAKGATFCLLLNYIHALATGLLLPAGVFKMIPMIGGHIALATILVARFRQLEADSIQSVKKYYKHIWDLFYLEYVLYTLI 392          
BLAST of mRNA_C-australica_Contig_1045.2.7 vs. uniprot
Match: A0A7S2L4H9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L4H9_9STRA)

HSP 1 Score: 329 bits (844), Expect = 1.010e-105
Identity = 180/340 (52.94%), Postives = 223/340 (65.59%), Query Frame = 2
Query:  209 LSQRAKAVYDFSRPHTIRGTILASFTGVARALIEQPAAISLD----LVPRAVLGLVALLLGNAFIVGINQIYDVDIDKVNKPFLPMAAGKMSQRFAWGVVVFSATMGPAIGLSPSRHLVMMSTKPNASCAALSLLSVFKNFSPLIIKLYMFGLTIGALYSVPPFQFKRIPILAGLTIACVRGFLLNFGVYYAVKEALGQSFSWNPAVIFLARFMTVFAGVIAVTKDLPDTEGDRFVSNCPTACSRMYNVSTFATRRGVSWTAKAASVVLGLNYVSAIVQGAISPAGSFNRKLMIGAHGAFILYLANSLRRLEADSKESIKAFYGRIWDLFYLEYAIYPFI 1216
            +  R +A+Y F+RPHTIRGTILASF G  RALI+ P AI+      L+PRA +G++ALLLGNAFIVGINQI+D DID +NKPFLP+A+G+MS+R AW  V+FS  +GPAI                          V+  F  ++ KLYM G T+G +YSVPP + KR P+ AGLTIA VRGFLLNFGVYYAVK+A+G  F W+P V F+ARFMT FA VIAVTKDLPD EGD+            YN+ST AT+ GVS  A  A+V L LNY+ AI+ G +S AG+FN   M+G H A  + L    + LE +   SIK +Y  IWDLFYLEY +Y  I
Sbjct:   66 IKARLRALYKFTRPHTIRGTILASFAGTTRALIDTPGAIATANWGALLPRAFIGMIALLLGNAFIVGINQIFDKDIDVLNKPFLPVASGEMSERVAWFAVLFSGIVGPAI--------------------------VYNFFPMMLFKLYMLGWTLGMVYSVPPLRTKRNPLAAGLTIATVRGFLLNFGVYYAVKDAIGAPFGWSPKVSFIARFMTAFATVIAVTKDLPDIEGDK-----------AYNISTLATKLGVSKIANGATVCLLLNYIHAILTGVLSKAGTFNVIPMVGGHAALAVMLLTRFKALEPEKLASIKTYYKHIWDLFYLEYFLYTLI 368          
BLAST of mRNA_C-australica_Contig_1045.2.7 vs. uniprot
Match: A0A7R9UKU9_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UKU9_DIALT)

HSP 1 Score: 326 bits (835), Expect = 2.150e-105
Identity = 184/330 (55.76%), Postives = 218/330 (66.06%), Query Frame = 2
Query:  227 AVYDFSRPHTIRGTILASFTGVARALIEQPAAISLDLVPRAVLGLVALLLGNAFIVGINQIYDVDIDKVNKPFLPMAAGKMSQRFAWGVVVFSATMGPAIGLSPSRHLVMMSTKPNASCAALSLLSVFKNFSPLIIKLYMFGLTIGALYSVPPFQFKRIPILAGLTIACVRGFLLNFGVYYAVKEALGQSFSWNPAVIFLARFMTVFAGVIAVTKDLPDTEGDRFVSNCPTACSRMYNVSTFATRRGVSWTAKAASVVLGLNYVSAIVQGAISPAGSFNRKLMIGAHGAFILYLANSLRRLEADSKESIKAFYGRIWDLFYLEYAIYPFI 1216
            ++Y F+RPHTIRGTILASF GVARALIE P+AISL LVP+A+ GL+ALLLGNAFIVGINQIYDV++DK+NKPFLP+AAG++S + AW +V+ S   G                          LL+V   FS LI  LY  GL+IG LYS+PP Q KR PI AGL I+ VRGFLLNFGVYYAV+EA+G  F WNP V F+A FMTVFA VIAVTKDLPD  GD             Y V TFATR GV   A+ A   LG  Y +A +   ++PAG F R  M   H A  + L  + RRL+A S  SIK FYG IW +FYL+YA+YPFI
Sbjct:    5 SLYKFTRPHTIRGTILASFAGVARALIEHPSAISLQLVPQALRGLLALLLGNAFIVGINQIYDVEVDKINKPFLPIAAGEISPQVAWALVLGSLCGG--------------------------LLTVRLCFSQLIFGLYALGLSIGGLYSLPPIQLKRFPIAAGLVISTVRGFLLNFGVYYAVREAIGVPFRWNPVVCFIATFMTVFASVIAVTKDLPDVVGDA-----------AYKVKTFATRYGVRAVARGACSALGGAYAAATLLALLAPAGVFRRLPMAVGHAALGVKLLATYRRLDATSLGSIKRFYGGIWQIFYLQYALYPFI 297          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1045.2.7 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YU62_9STRA6.310e-13462.83Tocopherol polyprenyltransferase-like protein n=1 ... [more]
A0A6H5JNV9_9PHAE4.570e-12760.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XLT2_HETAK1.310e-12660.34Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UTD4_9STRA6.060e-11858.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U3TIV9_9STRA7.510e-11255.62Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7TS50_9STRA2.110e-10854.07Tocopherol polyprenyltransferase-like protein n=2 ... [more]
A0A7S2Y379_9STRA7.570e-10852.05Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A1Z5KQI4_FISSO1.220e-10751.09Homogentisate solanesyltransferase n=2 Tax=Fistuli... [more]
A0A7S2L4H9_9STRA1.010e-10552.94Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7R9UKU9_DIALT2.150e-10555.76Hypothetical protein n=1 Tax=Diacronema lutheri Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1045contigC-australica_Contig_1045:716..4739 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog35128.Thaps263902
PFAMsUbiA
Model size1541
Max annot lvl2836|Bacillariophyta
KEGG rclassRC01840
KEGG koko:K12501
KEGG ReactionR08782
KEGG Pathwayko00130,map00130
Hectar predicted targeting categoryother localisation
Exons13
Evalue2.31e-106
EggNOG OGsCOG0382@1|root,2QUHT@2759|Eukaryota,2XCN7@2836|Bacillariophyta
Ec32 ortholog descriptiontransferase
Ec32 orthologEc-17_001240.1
EC2.5.1.117
DescriptionUbiA prenyltransferase family
Cds size1062
COG categoryH
BRITEko00000,ko00001,ko01000,ko01006
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586781.3861256-UTR-C-australica_Contig_1045:715..7751682586781.3861256-UTR-C-australica_Contig_1045:715..775Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1045 716..775 -
1682586781.4018228-UTR-C-australica_Contig_1045:1217..14791682586781.4018228-UTR-C-australica_Contig_1045:1217..1479Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1045 1218..1479 -
1682586781.5386982-UTR-C-australica_Contig_1045:4444..45001682586781.5386982-UTR-C-australica_Contig_1045:4444..4500Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1045 4445..4500 -
1682586781.5472326-UTR-C-australica_Contig_1045:4638..47391682586781.5472326-UTR-C-australica_Contig_1045:4638..4739Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1045 4639..4739 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586781.410768-CDS-C-australica_Contig_1045:1479..15821682586781.410768-CDS-C-australica_Contig_1045:1479..1582Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 1480..1582 -
1682586781.423795-CDS-C-australica_Contig_1045:1704..17681682586781.423795-CDS-C-australica_Contig_1045:1704..1768Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 1705..1768 -
1682586781.4347775-CDS-C-australica_Contig_1045:1940..19951682586781.4347775-CDS-C-australica_Contig_1045:1940..1995Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 1941..1995 -
1682586781.4447613-CDS-C-australica_Contig_1045:2132..22321682586781.4447613-CDS-C-australica_Contig_1045:2132..2232Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 2133..2232 -
1682586781.454223-CDS-C-australica_Contig_1045:2388..25121682586781.454223-CDS-C-australica_Contig_1045:2388..2512Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 2389..2512 -
1682586781.4748044-CDS-C-australica_Contig_1045:2844..29011682586781.4748044-CDS-C-australica_Contig_1045:2844..2901Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 2845..2901 -
1682586781.4927182-CDS-C-australica_Contig_1045:3239..34781682586781.4927182-CDS-C-australica_Contig_1045:3239..3478Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 3240..3478 -
1682586781.5025442-CDS-C-australica_Contig_1045:3750..38211682586781.5025442-CDS-C-australica_Contig_1045:3750..3821Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 3751..3821 -
1682586781.51086-CDS-C-australica_Contig_1045:4059..41671682586781.51086-CDS-C-australica_Contig_1045:4059..4167Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 4060..4167 -
1682586781.5196922-CDS-C-australica_Contig_1045:4230..43121682586781.5196922-CDS-C-australica_Contig_1045:4230..4312Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 4231..4312 -
1682586781.5287511-CDS-C-australica_Contig_1045:4385..44441682586781.5287511-CDS-C-australica_Contig_1045:4385..4444Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1045 4386..4444 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1045.2.7prot_C-australica_Contig_1045.2.7Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1045 1480..4444 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1045.2.7

>prot_C-australica_Contig_1045.2.7 ID=prot_C-australica_Contig_1045.2.7|Name=mRNA_C-australica_Contig_1045.2.7|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=354bp
MSDAGSTMPEQPSAGKDLSQRAKAVYDFSRPHTIRGTILASFTGVARALI
EQPAAISLDLVPRAVLGLVALLLGNAFIVGINQIYDVDIDKVNKPFLPMA
AGKMSQRFAWGVVVFSATMGPAIGLSPSRHLVMMSTKPNASCAALSLLSV
FKNFSPLIIKLYMFGLTIGALYSVPPFQFKRIPILAGLTIACVRGFLLNF
GVYYAVKEALGQSFSWNPAVIFLARFMTVFAGVIAVTKDLPDTEGDRFVS
NCPTACSRMYNVSTFATRRGVSWTAKAASVVLGLNYVSAIVQGAISPAGS
FNRKLMIGAHGAFILYLANSLRRLEADSKESIKAFYGRIWDLFYLEYAIY
PFI*
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mRNA from alignment at C-australica_Contig_1045:716..4739-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1045.2.7 ID=mRNA_C-australica_Contig_1045.2.7|Name=mRNA_C-australica_Contig_1045.2.7|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4024bp|location=Sequence derived from alignment at C-australica_Contig_1045:716..4739- (Chrysoparadoxa australica CS_1217)
GAGGGTTGCTCTCCTTTGCTTTCTCTCTCTAGGGGCGCTCTGCAAGGGCT TCCAGCCCGTAGGCTCCTTAGTCACCCTCACCCCCCACTCATCCTCCTCA GGTAAACCCACCAATGACTCACTCTACCCTACAGCGCCCTCAGCCCAGCA GGGGCATGGTGAGGGCCTTCCCTGCAAGGTGCCTTCACTTCACTCCGGCG ACTGACTGACTGAAGCACGTGTTGCTTGCACCATTTTAGGAGCTAACCCG CACCTGCAGCCCACCAAGCGAAATGGCAGCAACAATGGACTGCGCATGAG TGATGCTGGCTCCACCATGCCTGAGCAGCCCAGTGCTGGCAAGGACCTCT CACAGTACGCCTAGCCCCCACCCAGCCTGCTCCCATACCCCGTAGCTTAG TTCATCTCCTTCCCCCGATGTGTTCAGGCGGGCGAAAGCAGTCTACGACT TCAGCCGCCCTCACACCATTCGTGGCACCATTCTGGCCTCATTCACGGGT GTAGCTAGGGTAGGTTGCCAGTTTATTATACCTCTCTATACCCTATTCAC GCCTCTTCCTTCTCCTCCCCAGGCTCTAATCGAGCAACCGGCAGCAATTT CCTTAGACCTAGTACCCAGGGCGGTGCTGGGACTTGTGGCACTGCTGCTG GGGAATGCATTCATCGTGGGGATCAACCAGGTCTGTTGCAGTTTTAGCTG GGGAGTACTAAGAGTCAGGCAGATCTGGTGACATGTGGTAGCAGCCTATG CCCCAGTCTGGTATTAGTAGCCGATGTAGCTCCTATAGGGCTGGCTCCTC CTGGCACGAGCTAATACAGCACCGCTCAGCACCAATAGATAGGAATTGTG ATAAAGTTTTGCTAGTTGTATCGTGCTCTGCTGATCTTAATGACACTGTC TTGCTCTCATTGCACCAGATCTATGACGTAGACATTGATAAGGTGAACAA GCCTTTCTTGCCCATGGCTGCCGGCAAGATGAGTCAGAGGTGAGTTAGTG AATGAGTGAGTGAGTGAGTAAATGAGCAACTGAGTGAGTGAGTGAGTGGT AATGGGGGCTACAGGCTTGCCTTGCCCTACCCCCTCTATTGGGGCTGTGA TATGGACAGGAGAAAGGTGTTGGCGAGTGAGAACGTTTATAGCATATATG TGTGAGATCAGCCCAGCGTCAGGGTTGTTGAAGGGAAGGAAGAAGCTAGA TCTATACTAACTCTTAATTTTGCCTTTTGCATTGACCATTTGACCGTTCT GTATACTGCAGGTTTGCTTGGGGAGTGGTGGTCTTCTCTGCTACCATGGG ACCAGCAATAGGTCTCTCACCTTCACGTCACTTAGTAATGATGAGCACCA AACCGAATGCTTCATGCGCTGCCTTGTCTCTCCTATCAGTTTTCAAGAAC TTCTCCCCTCTCATCATCAAGCTTTACATGTTTGGGCTGACCATTGGGGC GCTGTACAGCGTGCCACCCTTTCAGTTCAAGCGGATACCAATCCTTGCAG GTAGGTGTTTCCCTCTCCTCTCTTGTGCTGTAAACCACCTGCTTTGCCTG CTCATGGAACACACTCAGCCAAGCCGGAACACATGCTGCCCATACTCCGA TGCCTTAGCCCTCTTGCTTGCAGTGCTCTCTCTCTCTCTCTCGTGCCAAC AAAGCATTACACTTGTTTGAGCGCTCTCACTGTGCCCTGAGCATCTCATG TACCACTTGCAGCCAAACGTGAAGCTTCACGATATTAGTAGACACCTCTT GCCTGGCCACGTGAATCCCCCTCTTATCTCTCTTTCTCTATCTCCTTCCC TCACTTCTTTTCTTCTTATTATGACTATGGTCTCACAGGGCTGACCATTG CTTGCGTCAGAGGCTTCTTGCTCAACTTTGGAGTGTACTATGCGGGTAGG GTCCTGCTGAGCTGATTGCAGACTGTACTCTACCATCCACAGCACTGCAC AGAGCTCCCCCATATGATATGAATGGCTCACCCGTTATAGTTTGCCATGA TCTGCCAGGACTTATTTAACATGCTTTATGAGACTGAATTGACTCATTAA AGTGACTCCTTAGTCACGATACCAGCAACTCAGTACCACTATCCTCCAGC TTACTTCGCTCCAAGGAAGCTCTATAACTATACCCTATGACCTATGTCTT GTAGCTGCCAACCGAGCTGTCATCTCGATGACCGTGCCTGCCTGTTTTGC TCACAAACTGGCTTCTCTGCTTCCCAGTCAAGGAGGCCTTGGGTCAGAGC TTTTCGTGGAACCCTGCCGTGATATTCCTGGCAAGGTTCATGACGGTGTT TGCGGGGGTAATAGCTGTCACAAAGGACCTGCCAGATACGGAAGGCGATC GGTAAGATGAGAGATGGGAGATGAGAGGGAGTGTTGGGTTGCCCGCAGCT AAGTCATAGGAGAGGCTGCTGGGCTGGGTTTCTGACTAAGGCATTGCTAT GGCATTGATGAGAGCCCGGCCTGCAATAACTCAGCTTTGTCTCCAACAAT AACTCAGCTTTGTCTCCAACTGTCCAACCGCTTGCTCCAGGATGTACAAT GTCAGCACCTTTGCTACACGCCGAGGAGTGTCATGGACTGCCAAGGCTGC CAGCGTGGTATGCATGATAACTGATTGCTTACAACCGATGACAGATAGCT TACAACCGATCACTGATGGCATACTCGTTGGCAACCCATTCCCCCCATCC TGACTCTGAAGCTCTCCATTTGCTTCTCTTGCACTTTGCCCTAGGTCTTG GGCCTGAATTATGTCAGTGCCATTGTCCAGGGGGCCATCAGCCCGGCAGG TATATGAATGAGCGTAATTGGTGATGAAAGGCACAGTAGCTGCCTGGTTA CTTCACACCATCCGTCATCATTGCTCCCAATGCACCCTGACTCCTTTCAA GTTGATTTGAACCTGGCTACTGGCACCTTTCTCACCGAAACCTCTCGCTG AGTGCTGCTCGCTGCCCCCAGGTTCCTTCAACAGAAAGCTCATGATTGGT GCACATGGAGCCTTCATCCTATACCTTGCCAACAGGTGTTAAACTCAGGA GATGTCACCACCAAACCATGTCTTTTCTTTCGTCAACCACTTGCTCTAGC TTGTAGCTTCCCATTACCTCACATCTAGTTCTAACCAGCACTCGCTCCTC TTCTCAGCCTACGGCGCTTGGAGGCAGACAGCAAGGAGAGCATCAAGGCC TTCTACGGCCGTATCTGGGACCTATTCTACTTGGAGTATGCCATTTACCC TTTCATATAGATAGCCAGCCGAAAGTGACCGGATGTGGGGGAGCTAGGAG GGGAGGGGTCCCCTCTCATCTTGAAGGGAGCCCCCAGATGTGCAGATGGT AGCCCGAAGAGCTGCTATACACCTATACTCAGCTTGCGATAGACCGTAGA GGGCAGGCTTTACGAGAGGGATACTGTATTCATTTTGTTGAGCTGCAAAT AGAGACCTTGTTACATGTCAAAGGCGTCTATGGCAGCTAGTCGCACTCGA ATCATTGTTTTGCCATCTCCTGGTGTTTCAGTAAGGGAGTTAGTTGACTT AAGGAGGTGAATACCACAGGCTTATCTTTCTTTAGGAATGCTCTACCCCC CCTTGTCAAAGTCAGTGTCACATCCAAGCGAAAGAAAGGCAAGCTTATTA CATTCACCAGACCTCTCTCGCTCAAACAACCCAGGAGGTAATTGTCAATG CTCCTGGCCAATTAAGTATTTAGTTGGATGAATTTCTGAGCCACTCTCCC ACATGGACCCACATTAACACGCAATGGGTGAAATGGCACCAGACAAATGG GAAAGAGGGCAGGGCAGCAGCTCCAATGTGACCAGCACGATCCAAATTCC ACTTAATTTGATACCGTAAGAAGCCCAACGCATCCTTCATGATGCCAACC TTGCTCTATCTATTTATGTGGTTTTAACACTACAGCCAAGACTACAAATG CTGCAGCTTGCCTGCTTTACTATATTTTGTGGTCTGTCTCTGATGGTAGT GCATCCAAGGGCATAGTATCGCGG
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Coding sequence (CDS) from alignment at C-australica_Contig_1045:716..4739-

>mRNA_C-australica_Contig_1045.2.7 ID=mRNA_C-australica_Contig_1045.2.7|Name=mRNA_C-australica_Contig_1045.2.7|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1062bp|location=Sequence derived from alignment at C-australica_Contig_1045:716..4739- (Chrysoparadoxa australica CS_1217)
ATGAGTGATGCTGGCTCCACCATGCCTGAGCAGCCCAGTGCTGGCAAGGA
CCTCTCACAGCGGGCGAAAGCAGTCTACGACTTCAGCCGCCCTCACACCA
TTCGTGGCACCATTCTGGCCTCATTCACGGGTGTAGCTAGGGCTCTAATC
GAGCAACCGGCAGCAATTTCCTTAGACCTAGTACCCAGGGCGGTGCTGGG
ACTTGTGGCACTGCTGCTGGGGAATGCATTCATCGTGGGGATCAACCAGA
TCTATGACGTAGACATTGATAAGGTGAACAAGCCTTTCTTGCCCATGGCT
GCCGGCAAGATGAGTCAGAGGTTTGCTTGGGGAGTGGTGGTCTTCTCTGC
TACCATGGGACCAGCAATAGGTCTCTCACCTTCACGTCACTTAGTAATGA
TGAGCACCAAACCGAATGCTTCATGCGCTGCCTTGTCTCTCCTATCAGTT
TTCAAGAACTTCTCCCCTCTCATCATCAAGCTTTACATGTTTGGGCTGAC
CATTGGGGCGCTGTACAGCGTGCCACCCTTTCAGTTCAAGCGGATACCAA
TCCTTGCAGGGCTGACCATTGCTTGCGTCAGAGGCTTCTTGCTCAACTTT
GGAGTGTACTATGCGGTCAAGGAGGCCTTGGGTCAGAGCTTTTCGTGGAA
CCCTGCCGTGATATTCCTGGCAAGGTTCATGACGGTGTTTGCGGGGGTAA
TAGCTGTCACAAAGGACCTGCCAGATACGGAAGGCGATCGCTTTGTCTCC
AACTGTCCAACCGCTTGCTCCAGGATGTACAATGTCAGCACCTTTGCTAC
ACGCCGAGGAGTGTCATGGACTGCCAAGGCTGCCAGCGTGGTCTTGGGCC
TGAATTATGTCAGTGCCATTGTCCAGGGGGCCATCAGCCCGGCAGGTTCC
TTCAACAGAAAGCTCATGATTGGTGCACATGGAGCCTTCATCCTATACCT
TGCCAACAGCCTACGGCGCTTGGAGGCAGACAGCAAGGAGAGCATCAAGG
CCTTCTACGGCCGTATCTGGGACCTATTCTACTTGGAGTATGCCATTTAC
CCTTTCATATAG
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