mRNA_C-australica_Contig_10448.1.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_10448.1.1 vs. uniprot
Match: A0A8J2VPP1_9RHOB (Lactate dehydrogenase n=1 Tax=Agaricicola taiwanensis TaxID=591372 RepID=A0A8J2VPP1_9RHOB) HSP 1 Score: 362 bits (929), Expect = 2.430e-122 Identity = 185/268 (69.03%), Postives = 217/268 (80.97%), Query Frame = 1
Query: 1 NGLGFVVARRAMELAIGMASQYGIGMVSAINSNHFGMAASYLLQAAEAGYISMVFTNASKAMPPWGGREGLLGTSPFAAGAPSGKEAPFILDMSPAVAARGKIRQAKWRGEQIPLGYALDADGKPTTDPAEAMKG-VVLPIGGPKGSGIAMLMDIMSGVFSGASFGGDVNNQYQVWDKPQGVGHFFLAIKPGLFVTEEGFRERMDELVRRVHGAPKAEGHDEILMPGEIEARLEAERLRTGIPYKTGDLEAIAEMAEKLGLDMMPISD 801
N GFVVA +AM AI MAS YGIGMV+A S HFGMAA Y+LQA EAGY+++VFTNAS+AMPPWGGR LLGTSPFAAGAPSG + P++LDMSPAVAARGKIR+A RGEQIPLGYALDA+G+ TTDP A+ G VVLPIGGPKGSG++MLMDI GVFSG++FGGDV NQ++ +D+PQ VGHFFLAIKPG+FV EE FR RMD LV RVH PKAEG DEILMPGE E RLEAERL +GIPY ++ A+ A + G+ +P+ +
Sbjct: 93 NAFGFVVATKAMAEAIDMASTYGIGMVAARRSTHFGMAACYVLQAVEAGYMALVFTNASRAMPPWGGRAALLGTSPFAAGAPSGNKTPYVLDMSPAVAARGKIRRAARRGEQIPLGYALDAEGRATTDPNAALDGGVVLPIGGPKGSGLSMLMDIFGGVFSGSAFGGDVGNQFEAYDRPQDVGHFFLAIKPGIFVGEEAFRARMDVLVERVHDCPKAEGVDEILMPGEFEGRLEAERLTSGIPYGPVEIAALQATAAEAGVAPLPVRE 360
BLAST of mRNA_C-australica_Contig_10448.1.1 vs. uniprot
Match: UPI001370923C (Ldh family oxidoreductase n=1 Tax=Propylenella binzhouense TaxID=2555902 RepID=UPI001370923C) HSP 1 Score: 353 bits (905), Expect = 1.350e-118 Identity = 177/269 (65.80%), Postives = 216/269 (80.30%), Query Frame = 1
Query: 1 NGLGFVVARRAMELAIGMASQYGIGMVSAINSNHFGMAASYLLQAAEAGYISMVFTNASKAMPPWGGREGLLGTSPFAAGAPSGKEAPFILDMSPAVAARGKIRQAKWRGEQIPLGYALDADGKPTTDPAEAMKGVVLPIGGPKGSGIAMLMDIMSGVFSGASFGGDVNNQYQVWDKPQGVGHFFLAIKPGLFVTEEGFRERMDELVRRVHGAPKAEGHDEILMPGEIEARLEAERLRTGIPYKTGDLEAIAEMAEKLGLDMMPISDKP 807
+G GFV+A RAM A+ MA + GIGMVSA+ S HFGMAASY+LQA EAG+I+ VFTNAS+AMPPWGGRE LLGTSPFAAGAP G+ PF+LDM+P+VAARGKIR+A+ GEQIPLGYALDA+GKPTTDP +A++GVVLP+GGPKGSG++MLMDIM GV SGA+F GDV +QY+ + +PQ VGHFFLAI+P LF++ FR RMD LV RV P+AEG DEILMPGE EAR EA RL GIPY+ DLE + A G+ ++ ++ +P
Sbjct: 97 DGFGFVIATRAMAEAMAMAGEVGIGMVSAMRSTHFGMAASYVLQAVEAGFIAFVFTNASRAMPPWGGREALLGTSPFAAGAPGGERGPFVLDMAPSVAARGKIRRAQRMGEQIPLGYALDAEGKPTTDPVKALQGVVLPMGGPKGSGLSMLMDIMGGVLSGAAFAGDVTDQYKDYTRPQNVGHFFLAIRPDLFMSAADFRARMDVLVERVKTCPRAEGFDEILMPGEPEARQEARRLAAGIPYQAKDLEPLLADARGRGVPLLAVASQP 365
BLAST of mRNA_C-australica_Contig_10448.1.1 vs. uniprot
Match: A0A0H1RPQ7_9HYPH (Uncharacterized protein n=3 Tax=Microvirga TaxID=186650 RepID=A0A0H1RPQ7_9HYPH) HSP 1 Score: 350 bits (899), Expect = 4.450e-118 Identity = 182/270 (67.41%), Postives = 214/270 (79.26%), Query Frame = 1
Query: 1 NGLGFVVARRAMELAIGMASQYGIGMVSAINSNHFGMAASYLLQAAEAGYISMVFTNASKAMPPWGGREGLLGTSPFAAGAPSGKEAPFILDMSPAVAARGKIRQAKWRGEQIPLGYALDADGKPTTDPAEAMKG-VVLPIGGPKGSGIAMLMDIMSGVFSGASFGGDVNNQYQVWDKPQGVGHFFLAIKPGLFVTEEGFRERMDELVRRVHGAPKAEGHDEILMPGEIEARLEAERLRTGIPYKTGDLEAIAEMAEKLGLDMMPISDKP 807
N GFVVA RAM AI MA ++GIG+VSA S HFGMAA Y+LQA EA +IS+VFTNAS AMPPWGGR+ LLGTSP AAG PSG EAP++LDMSPAVAARGKIR+A G++IPLGYALDADG+ TTDP A+ G VVLPIGGPKGS ++MLMDI+ GV SGA++ GDV NQ++V+D+PQ VGHFFLAIKP LFVT E F +RMD LV+RVH PKAEG DEILMPGE+E+RLEA R RTGIPY D+ A+ + A G + I+D P
Sbjct: 69 NAFGFVVASRAMAEAIDMAREFGIGLVSARRSTHFGMAACYVLQAVEASFISLVFTNASPAMPPWGGRQALLGTSPLAAGVPSGSEAPYVLDMSPAVAARGKIRRAAKLGQEIPLGYALDADGRATTDPNAALNGGVVLPIGGPKGSALSMLMDILGGVLSGAAYAGDVANQFEVFDRPQDVGHFFLAIKPDLFVTREEFLQRMDTLVQRVHDCPKAEGFDEILMPGEMESRLEATRKRTGIPYNAIDVAALQKEAADAGQPPLAIADAP 338
BLAST of mRNA_C-australica_Contig_10448.1.1 vs. uniprot
Match: A0A536TZ36_9PROT (Ldh family oxidoreductase n=7 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536TZ36_9PROT) HSP 1 Score: 347 bits (889), Expect = 2.760e-116 Identity = 172/269 (63.94%), Postives = 216/269 (80.30%), Query Frame = 1
Query: 1 NGLGFVVARRAMELAIGMASQYGIGMVSAINSNHFGMAASYLLQAAEAGYISMVFTNASKAMPPWGGREGLLGTSPFAAGAPSGKEAPFILDMSPAVAARGKIRQAKWRGEQIPLGYALDADGKPTTDPAEAMKGVVLPIGGPKGSGIAMLMDIMSGVFSGASFGGDVNNQYQVWDKPQGVGHFFLAIKPGLFVTEEGFRERMDELVRRVHGAPKAEGHDEILMPGEIEARLEAERLRTGIPYKTGDLEAIAEMAEKLGLDMMPISDKP 807
NG GFV+ AM AI +A + GIG+ SA S HFGMAASY+LQA +AG++++VFTNAS+AMPPWGGRE LLGTSP AAGAP G+ APF+LDMSPAVAARGKIR A+ RGE+IPLGYALDA G+PTTDP EA+KGVVLPIGGPKGSG++MLMDI GV SGA+F G+V +QY+V+D+PQ VGHFFLA++P LFV+++ +R RMD LV RV P+AEG DEIL+PGE+EAR E +R R+GIPY +++ + A + G+ + +S KP
Sbjct: 87 NGFGFVIGTCAMAEAISLARKSGIGIASARRSTHFGMAASYVLQALDAGFVALVFTNASRAMPPWGGREALLGTSPLAAGAPGGRLAPFVLDMSPAVAARGKIRIAEKRGEKIPLGYALDAQGRPTTDPTEALKGVVLPIGGPKGSGLSMLMDIFGGVLSGAAFAGEVTDQYKVFDRPQNVGHFFLAMRPDLFVSKKDYRVRMDTLVERVRACPRAEGFDEILLPGELEAREEDKRRRSGIPYSAAEIDPLQNEAARAGVAKLEVSVKP 355
BLAST of mRNA_C-australica_Contig_10448.1.1 vs. uniprot
Match: A0A346R460_9HYPH (Ldh family oxidoreductase n=1 Tax=Breoghania sp. L-A4 TaxID=2304600 RepID=A0A346R460_9HYPH) HSP 1 Score: 354 bits (908), Expect = 3.230e-116 Identity = 181/259 (69.88%), Postives = 214/259 (82.63%), Query Frame = 1
Query: 1 NGLGFVVARRAMELAIGMASQYGIGMVSAINSNHFGMAASYLLQAAEAGYISMVFTNASKAMPPWGGREGLLGTSPFAAGAPSGKEAPFILDMSPAVAARGKIRQAKWRGEQIPLGYALDADGKPTTDPAEAMKGVVLPIGGPKGSGIAMLMDIMSGVFSGASFGGDVNNQYQVWDKPQGVGHFFLAIKPGLFVTEEGFRERMDELVRRVHGAPKAEGHDEILMPGEIEARLEAERLRTGIPYKTGDLEAIAEMAEKLG 777
N LGF+V RRAM+ AI MAS++GIGMVSA NSNHFGMAA+Y+LQA EAG+I+ VFTNAS+AMPPWGGRE L GTSPFAAGAPSGKE PF+LDMSP VAARGKIR+A+ +G +IP G+ALDA G+PTTDP AMKGVVLPIGGPKGSG+AMLMDIM GVFSGA F G V +QY+ + PQ VGHFF+AIKPGLF+++ FR RMD LV+ VHGAP A+G DE+L+PGEIE RLEA+R ++GIPY DL + A + G
Sbjct: 97 NALGFLVGRRAMDEAIAMASEFGIGMVSARNSNHFGMAATYVLQAVEAGHIAFVFTNASRAMPPWGGREPLFGTSPFAAGAPSGKEIPFVLDMSPCVAARGKIRRAERQGLEIPEGWALDATGRPTTDPTAAMKGVVLPIGGPKGSGLAMLMDIMGGVFSGAGFAGGVRDQYKETE-PQNVGHFFMAIKPGLFMSDADFRARMDVLVQTVHGAPLADGFDEVLVPGEIEGRLEADRRKSGIPYAERDLALLRATAAEFG 354
BLAST of mRNA_C-australica_Contig_10448.1.1 vs. uniprot
Match: UPI001EF43FAF (Ldh family oxidoreductase n=1 Tax=Microvirga sp. ACRRW TaxID=2918205 RepID=UPI001EF43FAF) HSP 1 Score: 343 bits (879), Expect = 1.220e-114 Identity = 176/272 (64.71%), Postives = 213/272 (78.31%), Query Frame = 1
Query: 1 NGLGFVVARRAMELAIGMASQYGIGMVSAINSNHFGMAASYLLQAAEAGYISMVFTNASKAMPPWGGREGLLGTSPFAAGAPSGKEAPFILDMSPAVAARGKIRQAKWRGEQIPLGYALDADGKPTTDPAEAMKG-VVLPIGGPKGSGIAMLMDIMSGVFSGASFGGDVNNQYQVWDKPQGVGHFFLAIKPGLFVTEEGFRERMDELVRRVHGAPKAEGHDEILMPGEIEARLEAERLRTGIPYKTGDLEAIAEMAEKLGLDMMPISDKPSA 813
N GFVVA AM A+ MA ++GIG+VSA S HFGMAA Y+LQA EAG+ISMVFTNAS AMPPWGGR+ LLGTSP AAG P+G E P+ILDMSPAVAARGKIR+A G+ IPLGYALDA G+PTT+P A+ G VVLPIGGPKGS ++MLMDI+ GV SGA++ G V NQ++V+D+PQ VGHFFLAIKP LFV+ + F +RMD LV+RVHG PKAEG DEILMPGE+E+RLEA R+R GIPY D+ A+ + A G + ++ +P A
Sbjct: 97 NAFGFVVATYAMAEAVEMAREFGIGLVSARRSTHFGMAACYVLQAVEAGFISMVFTNASPAMPPWGGRQALLGTSPLAAGVPAGSEVPYILDMSPAVAARGKIRRAAKLGQDIPLGYALDASGRPTTNPKAALDGGVVLPIGGPKGSALSMLMDILGGVLSGAAYAGGVANQFEVFDRPQDVGHFFLAIKPDLFVSRDDFLQRMDTLVQRVHGCPKAEGFDEILMPGELESRLEASRVRAGIPYNAIDIAALQKEAATAGQAPLAVAQQPFA 368
BLAST of mRNA_C-australica_Contig_10448.1.1 vs. uniprot
Match: A0A0H1R732_9HYPH (Uncharacterized protein n=3 Tax=Microvirga TaxID=186650 RepID=A0A0H1R732_9HYPH) HSP 1 Score: 337 bits (864), Expect = 1.710e-112 Identity = 172/269 (63.94%), Postives = 210/269 (78.07%), Query Frame = 1
Query: 1 NGLGFVVARRAMELAIGMASQYGIGMVSAINSNHFGMAASYLLQAAEAGYISMVFTNASKAMPPWGGREGLLGTSPFAAGAPSGKEAPFILDMSPAVAARGKIRQAKWRGEQIPLGYALDADGKPTTDPAEAMKGVVLPIGGPKGSGIAMLMDIMSGVFSGASFGGDVNNQYQVWDKPQGVGHFFLAIKPGLFVTEEGFRERMDELVRRVHGAPKAEGHDEILMPGEIEARLEAERLRTGIPYKTGDLEAIAEMAEKLGLDMMPISDKP 807
NG GFVVA RAM+ A+ +A G+G+VS S HFGMAA+YLLQA EAG+I++VFTNAS++MPPWGGRE LLGTSPF AGAP G PFILDM+P+VAARGKIR+A G+ IP YALDA+G+PTTDPA A+ GVVLP+GGPKGSG++MLMDI+SGV SGA+F GDV +QY+ ++KPQ VGHFFLAIKP LF+ E +R RMD LV RVH P+AEG DE+LMPGE EAR E RL TGIPY DL+++ + A + L+ + S P
Sbjct: 90 NGFGFVVATRAMQEAMEIARTTGLGLVSVKRSTHFGMAANYLLQAVEAGFIALVFTNASRSMPPWGGREALLGTSPFGAGAPGGDHGPFILDMAPSVAARGKIRKALRLGQPIPPDYALDAEGRPTTDPARALAGVVLPMGGPKGSGLSMLMDILSGVISGAAFAGDVEDQYKNFEKPQNVGHFFLAIKPDLFIGIEEYRARMDVLVERVHSTPRAEGFDEVLMPGEPEARQEKLRLATGIPYHRADLDSLLKEARAVRLEPLTTSTLP 358
BLAST of mRNA_C-australica_Contig_10448.1.1 vs. uniprot
Match: A0A6N7GZ64_9HYPH (Ldh family oxidoreductase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GZ64_9HYPH) HSP 1 Score: 336 bits (862), Expect = 7.300e-112 Identity = 171/271 (63.10%), Postives = 210/271 (77.49%), Query Frame = 1
Query: 1 NGLGFVVARRAMELAIGMASQYGIGMVSAINSNHFGMAASYLLQAAEAGYISMVFTNASKAMPPWGGREGLLGTSPFAAGAPSGKEAPFILDMSPAVAARGKIRQAKWRGEQIPLGYALDADGKPTTDPAEAMKGVVLPIGGPKGSGIAMLMDIMSGVFSGASFGGDVNNQYQVWDKPQGVGHFFLAIKPGLFVTEEGFRERMDELVRRVHGAPKAEGHDEILMPGEIEARLEAERLRTGIPYKTGDLEAIAEMAEKLGLDMMPISDKPSA 813
+ GFVV A+ AI MA+ YGIG+VSA S HFGMAASY L A EAG++ MVF+NAS AMPPWGG++GLLGT+PF GAP GK PF+LDMSPAVAARGK+R+A+ RGE IPLGYALDA+G+PTTDP A+ GVVLPIG KGSGI+M+MDI GV SGA+F G+V +QY+ +D+PQ VGHFFLA+KP LF++EE +R RMD LV RV PKAEG DEIL+PGE EARLEA+ ++GIPY DL + AEK + +P+S++P A
Sbjct: 113 DAFGFVVGMCAINEAIAMAADYGIGVVSARRSTHFGMAASYALPAIEAGFMVMVFSNASPAMPPWGGKDGLLGTNPFCVGAPGGKLPPFLLDMSPAVAARGKVRRAQRRGETIPLGYALDAEGRPTTDPTAALGGVVLPIGTYKGSGISMMMDIFGGVISGAAFAGNVADQYKAFDRPQDVGHFFLAMKPNLFISEEEYRARMDTLVERVRTVPKAEGFDEILIPGEPEARLEAQHRKSGIPYSPHDLAPLNAEAEKANVQRLPVSERPLA 383
BLAST of mRNA_C-australica_Contig_10448.1.1 vs. uniprot
Match: A0A1Q7BST0_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BST0_9PROT) HSP 1 Score: 333 bits (855), Expect = 2.050e-111 Identity = 168/269 (62.45%), Postives = 208/269 (77.32%), Query Frame = 1
Query: 1 NGLGFVVARRAMELAIGMASQYGIGMVSAINSNHFGMAASYLLQAAEAGYISMVFTNASKAMPPWGGREGLLGTSPFAAGAPSGKEAPFILDMSPAVAARGKIRQAKWRGEQIPLGYALDADGKPTTDPAEAMKGVVLPIGGPKGSGIAMLMDIMSGVFSGASFGGDVNNQYQVWDKPQGVGHFFLAIKPGLFVTEEGFRERMDELVRRVHGAPKAEGHDEILMPGEIEARLEAERLRTGIPYKTGDLEAIAEMAEKLGLDMMPISDKP 807
NG GFVV RAM+ AI +A + G+G+VSA S HFGMAA+Y+ QA +AG IS+VF+NAS AMPPWG R LLGT+PFAAGAP+G+ PF+LDMSPAVAARGKIR+A+ RGE+IPLGYALDADG+ T DP A+ GVVLPIG KGSG++MLMDI GV SGA++GGDV +QY+V+D+PQ VGHFFLA+KP LFV EE +R+RMD L+ RVH P A+G DE+L+PGE E R E ER R GIPY ++ + E A K G+ + +S P
Sbjct: 69 NGFGFVVGTRAMQEAIAIARELGVGVVSARRSTHFGMAAAYVRQALDAGLISLVFSNASPAMPPWGARTALLGTNPFAAGAPAGRHPPFLLDMSPAVAARGKIRRAERRGEKIPLGYALDADGRATRDPKAALGGVVLPIGTYKGSGLSMLMDIFGGVISGANYGGDVGDQYKVYDRPQDVGHFFLAMKPDLFVPEENYRDRMDTLIERVHACPTAQGFDEVLIPGEPERRHEEERRRRGIPYSANEVAPLQEEAAKAGIAPLNVSPNP 337
BLAST of mRNA_C-australica_Contig_10448.1.1 vs. uniprot
Match: A0A7J9ZM32_9ACTN (Ldh family oxidoreductase n=1 Tax=Streptosporangiales bacterium TaxID=2604148 RepID=A0A7J9ZM32_9ACTN) HSP 1 Score: 333 bits (853), Expect = 7.220e-111 Identity = 172/269 (63.94%), Postives = 205/269 (76.21%), Query Frame = 1
Query: 1 NGLGFVVARRAMELAIGMASQYGIGMVSAINSNHFGMAASYLLQAAEAGYISMVFTNASKAMPPWGGREGLLGTSPFAAGAPSGKEAPFILDMSPAVAARGKIRQAKWRGEQIPLGYALDADGKPTTDPAEAMKGVVLPIGGPKGSGIAMLMDIMSGVFSGASFGGDVNNQYQVWDKPQGVGHFFLAIKPGLFVTEEGFRERMDELVRRVHGAPKAEGHDEILMPGEIEARLEAERLRTGIPYKTGDLEAIAEMAEKLGLDMMPISDKP 807
+G GFVVA RAM+ AI MA G G+VS S HFGMAA+Y+LQA +AG I+MV TNAS AMPPWGGRE LLGTSP A GAP G+ A ++LDMSPAVAARGKIR A RGE IP GYALDA+G+ TTDP A+ GVVLPIGGPKGSG+A+LMDIM GV SGA+F GDV +QY+ +D+PQ VGHFFLA+KP LF+ + +R RMD LV R+H P EG DE+L+PGEIEARLEA R TGIPY +L A+ E A + G+ +PI+ P
Sbjct: 86 DGFGFVVATRAMDEAIAMARTSGAGIVSVRRSTHFGMAANYVLQAIDAGMIAMVLTNASPAMPPWGGREALLGTSPLAVGAPGGRRAHYVLDMSPAVAARGKIRLAARRGEDIPPGYALDAEGRATTDPQAALGGVVLPIGGPKGSGLALLMDIMCGVLSGAAFAGDVGDQYKSYDRPQNVGHFFLALKPDLFLPADDYRARMDILVDRIHANPPMEGVDEVLLPGEIEARLEARRATTGIPYGDRELAALREEARRAGVAELPIAGHP 354 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10448.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10448.1.1 >prot_C-australica_Contig_10448.1.1 ID=prot_C-australica_Contig_10448.1.1|Name=mRNA_C-australica_Contig_10448.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=272bp NGLGFVVARRAMELAIGMASQYGIGMVSAINSNHFGMAASYLLQAAEAGYback to top mRNA from alignment at C-australica_Contig_10448:3..818- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10448.1.1 ID=mRNA_C-australica_Contig_10448.1.1|Name=mRNA_C-australica_Contig_10448.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=816bp|location=Sequence derived from alignment at C-australica_Contig_10448:3..818- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10448:3..818- >mRNA_C-australica_Contig_10448.1.1 ID=mRNA_C-australica_Contig_10448.1.1|Name=mRNA_C-australica_Contig_10448.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=816bp|location=Sequence derived from alignment at C-australica_Contig_10448:3..818- (Chrysoparadoxa australica CS_1217)back to top |