mRNA_C-australica_Contig_10432.1.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_10432.1.1 vs. uniprot
Match: A0A2E6H0G9_9PROT (Uncharacterized protein n=1 Tax=Halobacteriovorax sp. TaxID=2020862 RepID=A0A2E6H0G9_9PROT) HSP 1 Score: 291 bits (745), Expect = 1.400e-94 Identity = 148/272 (54.41%), Postives = 190/272 (69.85%), Query Frame = 1
Query: 1 IHEYVNLFGMAPQYVAANKAPALSKVIGYLKNITKKIEAYKAVPTSDEHVLELMPLRIQDDKIIAIKEKNPRTIVFDKNAQLKNTFEGAKITSNGQKGQPAEIFFPKKKDGERSGTQYALAKTVYEKVGLDSTWRKNFLPGPYLSSYGRLNDEVLTLTKNGASEIMEFKLGNAKYAERSEKRRRKMFTNPASANLVGKYNSIEAEDGMFILSPMETTTQATDKVVVPRIGLFIDIFDATKALNQDVVELVFINPENPEDFLMYYEHPDNGEG 816
+HEYVNL M P+YVAA KAP L+K+IGYLK IT K+E K VPT E + +R+ + + + PR +V +L++ EGA ITSNG KGQP EIFFP +D + +G QY LA Y+ LDSTWRK+FLPGPYLS+YGRLND VL L+ G ++ F + N + ++S RR+KMFTN SA L G Y IE +GMF+L + ++ + T+KV+ RIGLF+DIFDATKALNQDVVEL+F++P NP+DFLMYYEHPDNGEG
Sbjct: 72 VHEYVNLLNMFPEYVAAAKAPGLNKLIGYLKKITAKLEVMKVVPTGTEGTFNMYEVRVDGESLTHVPTDKPRQLVLSDKQELEHPLEGAIITSNGGKGQPKEIFFPADRDKKYNGLQYTLANFTYKAFKLDSTWRKSFLPGPYLSAYGRLNDTVLELSLEGGKQMTNFII-NPEMKDKSSWRRKKMFTNKKSAFLEGDYEMIEPAEGMFLLREI-SSNKKTNKVLEGRIGLFVDIFDATKALNQDVVELIFVDPANPKDFLMYYEHPDNGEG 341
BLAST of mRNA_C-australica_Contig_10432.1.1 vs. uniprot
Match: A0A2E3XPY3_9PROT (Uncharacterized protein n=1 Tax=Halobacteriovoraceae bacterium TaxID=2026745 RepID=A0A2E3XPY3_9PROT) HSP 1 Score: 281 bits (718), Expect = 1.460e-90 Identity = 151/271 (55.72%), Postives = 182/271 (67.16%), Query Frame = 1
Query: 7 EYVNLFGMAPQYVAANKAPALSKVIGYLKNITKKIEAYKAVP-TSDEHVLELMPLRIQDDKIIAIKEKNPRTIVFDKNAQLKNTFEGAKITSNGQKGQPAEIFFPKKKDGERSGTQYALAKTVYEKVGLDSTWRKNFLPGPYLSSYGRLNDEVLTLTKNGASEIMEFKLGNAKYAERSEKRRRKMFTNPASANLVGKYNSIEAEDGMFILSPMETTTQATDKVVVPRIGLFIDIFDATKALNQDVVELVFINPENPEDFLMYYEHPDNGEG 816
EYVNL MAPQY+AANK P S VIGYLKNIT+KI +KAVP E V L L I ++I + PR ++ K+A + EGA ITSNG+K QP EIFFP K D + +G QY A VY+KVGLDSTWRK++LPGPY S+YGR +D VL +T G + F K SE++RR MFTNP SA L G ++ +E DGMF+ + + + D+V RIGLFIDIFDATKALNQDVVE INPE+PEDFLMYYE PDNGEG
Sbjct: 77 EYVNLLRMAPQYIAANKLPIASNVIGYLKNITRKIATFKAVPHVEKEGVYNLYELHIVGERIEPKIVEKPRQLILSKSANENSPLEGAIITSNGKKNQPKEIFFPAKNDKKDNGVQYHTANFVYKKVGLDSTWRKDYLPGPYFSAYGRKDDVVLKMTTQGTQDQASFIDDPEKATSMSERKRRAMFTNPKSAFLKGDFDVVEPLDGMFLFKSVASDKKTNDEVT-QRIGLFIDIFDATKALNQDVVEFTLINPEDPEDFLMYYEDPDNGEG 346
BLAST of mRNA_C-australica_Contig_10432.1.1 vs. uniprot
Match: A0A849THP7_9PROT (Uncharacterized protein n=1 Tax=Bacteriovoracaceae bacterium TaxID=2081706 RepID=A0A849THP7_9PROT) HSP 1 Score: 254 bits (648), Expect = 4.550e-80 Identity = 134/270 (49.63%), Postives = 183/270 (67.78%), Query Frame = 1
Query: 7 EYVNLFGMAPQYVAANKAPALSKVIGYLKNITKKIEAYKAVPTSDEHVLELMPLRIQDDKIIAIKEKNPRTIVFDKNAQLKNTFEGAKITSNGQKGQPAEIFFPKKKDGERSGTQYALAKTVYEKVGLDSTWRKNFLPGPYLSSYGRLNDEVLTLTKNGASEIMEFKLGNAKYAERSEKRRRKMFTNPASANLVGKYNSIEAEDGMFILSPMETTTQATDKVVVPRIGLFIDIFDATKALNQDVVELVFINPENPEDFLMYYEHPDNGEG 816
EYV+L MAP Y+ +NK PA++K +G+L +IT KI AYKA P+++E EL PL +KII KE PR + K+ + + GA I+S + G+P EIFFPK+ D +R+G QY +AK Y K L+STWRKN+LPGPYLS Y +++D VL L +G + EFKL N + S+++R ++FT+ SA L G+++ E DGMF+ S + + D +V +IGLFID+FDATK+LNQDVVEL I+ E P +FLMYYEHPDNGEG
Sbjct: 74 EYVDLIKMAPSYIISNKMPAVAKKVGFLNSITSKITAYKATPSANEGTFELWPLVASGEKIIEKKEGKPRLLTLAKDETVGDALAGATISSVNE-GEPIEIFFPKEDDEKRNGVQYGVAKLTYSKAKLESTWRKNYLPGPYLSQYAKVDDVVLDLAGSGDNLRAEFKL-NESASNVSKEKRERVFTHKDSAFLKGEFSVTEPLDGMFLFSSVNADAKTRD-IVQGKIGLFIDVFDATKSLNQDVVELALIDSEKPGEFLMYYEHPDNGEG 340
BLAST of mRNA_C-australica_Contig_10432.1.1 vs. uniprot
Match: A0A2D5YNS5_9PROT (Uncharacterized protein n=1 Tax=Halobacteriovorax sp. TaxID=2020862 RepID=A0A2D5YNS5_9PROT) HSP 1 Score: 199 bits (506), Expect = 2.140e-58 Identity = 114/272 (41.91%), Postives = 165/272 (60.66%), Query Frame = 1
Query: 1 IHEYVNLFGMAPQYVAANKAPALSKVIGYLKNITKKIEAYKAVPTSDEHVLELMPLRIQDDKIIAIKEKNPRTIVFDKNAQLKNTFEGAKITSNGQKGQPAEIFFPKKKDGERSGTQYALAKTVYEKVGLDSTWRKNFLPGPYLSSYGRLNDEVLTLTKNGASEIMEFKLGNAKYAERSEKRRRKMFTNPASANLVGKYNSIEAEDGMFILSPMETTTQATDKVVVPRIGLFIDIFDATKALNQDVVELVFINPENPEDFLMYYEHPDNGEG 816
I EYV+L MAP+Y+ +NK+ +S IGYL I +I AY+A PT++E E+ L ++ + + P ++ ++ N GAKIT+ + G+P EI FPK +D + G Q++LA Y KV L+STWR +LPGPYL +Y D +L L K + +F + N + S+K+R K TN SA + G++ + + EDG+F+ + + D V ++GLFIDIFDAT+AL QDVVELV ++ P DFLMYYEHP+NGEG
Sbjct: 95 ILEYVDLVKMAPKYIFSNKSSLISDKIGYLNQINSRITAYRANPTAEEGKFEMQKLHYRNGVLEEDNKPEPSMLILGEDKA--NPIAGAKITA-AKDGEPVEIQFPKDEDHDL-GKQHSLAAFTYNKVKLNSTWRSEYLPGPYLGAYYDKKDIILDLKKKDGNMTAKFMI-NKDRSHLSKKKREKQLTNAKSAYIEGEFIAKKVEDGIFVFEAKDNNVRNKD-YVEGKLGLFIDIFDATEALGQDVVELVIVDSNAPTDFLMYYEHPENGEG 360
BLAST of mRNA_C-australica_Contig_10432.1.1 vs. uniprot
Match: A0A1Y5FBP9_9PROT (Uncharacterized protein n=1 Tax=Halobacteriovorax marinus TaxID=97084 RepID=A0A1Y5FBP9_9PROT) HSP 1 Score: 192 bits (489), Expect = 1.060e-55 Identity = 109/284 (38.38%), Postives = 154/284 (54.23%), Query Frame = 1
Query: 7 EYVNLFGMAPQYVAANKAPALSKVIGYLKNITKKIEAYKAVPTSDEHVLELMPLRIQDDKIIAIKEKNPRTIVFDKNAQLKNTFEGAKITS--NGQKGQPAEIFFP------------KKKDGERSGTQYALAKTVYEKVGLDSTWRKNFLPGPYLSSYGRLNDEVLTLTKNGASEIMEFKLGNAKYAERSEKRRRKMFTNPASANLVGKYNSIEAEDGMFILSPMETTTQATDKVVVPRIGLFIDIFDATKALNQDVVELVFINPENPEDFLMYYEHPDNGEG 816
EY NL MAP YV +NK P + + G+LK I + YK P ++ E+ L + +++A + P + L + GA+I++ +KG ++FFP K+K + G Q+ LA VY+KV L+STWR NFLPGPYL +Y +VLTL + +F L + RR FTN SA++ G + + G+FI S + + + V RIG+FIDIFDA K+L+QDVVEL+ ++ NP DFLMYYEHPDNGEG
Sbjct: 95 EYTNLLRMAPTYVGSNKLPPIQSIFGFLKKIATSVTVYKVTPLAEAGKYEMQLLNARGGQLVATQSATPMVLHLSDAENLSHPLSGARISNFAKSKKGNEVDVFFPEIPQTETKEEEKKRKKEAKFGMQFNLANFVYKKVKLESTWRDNFLPGPYLRAYNDKKHQVLTLKADAGKLEADFVLEKGWRIWSGLRARR--FTNKKSASIKGNFEVTKVAKGIFIFSSTDDKNEGVEHVE-DRIGVFIDIFDARKSLDQDVVELIMVDSNNPTDFLMYYEHPDNGEG 375
BLAST of mRNA_C-australica_Contig_10432.1.1 vs. uniprot
Match: UPI001B06759D (Uncharacterized protein n=1 Tax=Bdellovibrio sp. TaxID=28201 RepID=UPI001B06759D) HSP 1 Score: 79.0 bits (193), Expect = 9.000e-14 Identity = 59/157 (37.58%), Postives = 80/157 (50.96%), Query Frame = 1
Query: 7 EYVNLFGMAPQYVAANKAPALSKVIGYLKNITKKIEAYKAVPTSDEHVLELMPLRIQDDKIIAIKEKNPRTIVFDKNAQLKNTFEGAKITS--NGQKGQPAEIFFPKKKDGERSGT------QYALAKTVYEKVGLDSTWRKNF--LPGPYLSSYGR 447
EY L M Y+A+ KAP L+ V+GYL I +I AYK VP + E+ L +Q +I+A ++K T+V + GA IT +GQ P ++ K D S T Q LA+ VY+K L S+WR N+ L G YLS YGR
Sbjct: 86 EYDQLLNMGLPYLASQKAPFLNHVVGYLDKIATRISAYKFVPGAQPGTYEMHNLIVQSGQIVA-QDKFAMTLVISSKPGISAPLAGAVITGFKDGQISFP-DVLASNKSDVVSSITEVLNFSQLDLARVVYKKGHLASSWRGNWKDLEGSYLSEYGR 240
BLAST of mRNA_C-australica_Contig_10432.1.1 vs. uniprot
Match: UPI001B25AB43 (Uncharacterized protein n=1 Tax=Bdellovibrio sp. TaxID=28201 RepID=UPI001B25AB43) HSP 1 Score: 58.2 bits (139), Expect = 1.130e-7 Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 622 MFILSPMETTTQ-ATDKVVVPRIGLFIDIFDAT--KALNQDVVELVFINPENPEDFLMYYEHP 801
M++L P T+ A+D + RIGLF+D+FD + +A V EL + NP +PEDF+MYYEHP
Sbjct: 3 MYVLVPATNRTRTASDIEMTGRIGLFLDVFDGSSPEAGRHLVTELAYTNPYDPEDFMMYYEHP 65 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10432.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10432.1.1 >prot_C-australica_Contig_10432.1.1 ID=prot_C-australica_Contig_10432.1.1|Name=mRNA_C-australica_Contig_10432.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=263bp MAPQYVAANKAPALSKVIGYLKNITKKIEAYKAVPTSDEHVLELMPLRIQback to top mRNA from alignment at C-australica_Contig_10432:2..817+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10432.1.1 ID=mRNA_C-australica_Contig_10432.1.1|Name=mRNA_C-australica_Contig_10432.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=816bp|location=Sequence derived from alignment at C-australica_Contig_10432:2..817+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10432:2..817+ >mRNA_C-australica_Contig_10432.1.1 ID=mRNA_C-australica_Contig_10432.1.1|Name=mRNA_C-australica_Contig_10432.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=789bp|location=Sequence derived from alignment at C-australica_Contig_10432:2..817+ (Chrysoparadoxa australica CS_1217)back to top |