mRNA_C-australica_Contig_1043.2.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: D7FMM0_ECTSI (DNA repair protein RadA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM0_ECTSI) HSP 1 Score: 607 bits (1564), Expect = 1.210e-200 Identity = 347/616 (56.33%), Postives = 414/616 (67.21%), Query Frame = 3
Query: 1008 LPRMVSWGLNSRSPPSTRKALGSKSKTHITVYVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGLRQSSRAGLRS----GEGTKPAARSLDPRAVTSAPSGSFEHDS---WVPD-GVAGQGLVQRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKL---------------------------------AGTTTGAG---LGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKG-----------SKAKLPSG------------IEVVQCRSLKHAIDVGLTRRAYPHKYDPKKKG 2654
+PRMVSWGLNSRS PS RKALGS KTH VYVCEVCGSEHVQWVGRCPTCKEWN VKPFKV RE GS + SRA S G A DP + G+F W+P+ G A L+ + + E R+ LPGTEL RVLGGGLVPGS+ M+GGDPGVGKSTL+LQLAG+L A T A G +VY+SGEE+ +QVA+RA R I L+L ETDID+I DQ+ M+P PALV+VDSIQT+ + D S PGS++QVKEC+ RLV +AKG G+ VF+VGHVTKSG IAGP+ VEHMVD VLYLEGD NSYRLLRSVKNRFG SNEIGVF+M GGL +V +PS LFLS + D + ++DG+AV V MEGSRP+LCELQ+LVT+++LPSPRRTSDG+ +PRLLLLLAVLQKRLGY+MSSREVYLN+VGGL++ E A+DLAVAL +VSSYT IPV DTCFIGE+GLGGE+R VQQL RR+QEA FG++RVV P K KA++ +G IEV++CR+LK A+ GLT PKK+G
Sbjct: 112 MPRMVSWGLNSRSQPSARKALGSNKKTHTIVYVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSSPSRVSRAAAASVTAGARGGGRGASGGDPE-FSGLGGGAFGGSGGAGWLPEEGFAAPTLLSEVGEAEKQG---RMPLPGTELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDATPVTEAERCRAGTVVYISGEENNSQVAARAARMGIGGVDLFLYCETDIDVIIDQMLVMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMEAGGLDDVADPSMLFLSDKN-VDDDDHAEHMDGSAVCVYMEGSRPILCELQSLVTYTRLPSPRRTSDGLPIPRLLLLLAVLQKRLGYDMSSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRPDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVPFTRKNRSARSRGGGRAGKARVAAGVSEAGNDGRRGAIEVIECRNLKDAVAAGLTAV-------PKKRG 715
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: A0A836CK68_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK68_9STRA) HSP 1 Score: 469 bits (1206), Expect = 1.580e-149 Identity = 276/561 (49.20%), Postives = 335/561 (59.71%), Query Frame = 3
Query: 1011 PRMVSWGLNSRSPPSTRKALGSKSKTHITVYVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGLRQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLVQRITDVEADEMLQRIELPGT-ELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKLAGTTTGA------------------------------------------------------GLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTA---SPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTP 2519
PR +S+GL SRS PSTRKALGS SKTH TVYVCEVCG+E VQWVGRCPTCKEWNSV+ KV R+G W+ G G G+ R+TD+ ++E +R+ELPG E +RVLGGGLVPGS+ MIGGDPGVGKSTL+LQLAG+LAG +G +VYVSGEES Q+A+RA+R + P LYL++ETDI +I D L AM P PALV++DSIQT+ S D++S GS +QV++ + L+ +AK +AV ++GHVTKSGDIAGPRTVEHMVD VLYLEGD LN+YRLLRSVKNRFG+ +EIGVFEM GL+EV NPS LF STA D G DGTAV+V MEG+RPLLCE ALVT S++ +PRR ++G+ RL LLLAVLQ+RL Y SSREVY+NVVGGLRL GE+RMVQQL+RR+ EA K+G+ RVV P
Sbjct: 85 PRFISYGLQSRSAPSTRKALGSGSKTHATVYVCEVCGAEQVQWVGRCPTCKEWNSVREHKVRRDGXXXXXXXXXXXX-------------XXXXXXXXXXXXXXXAGWLVPGADGYGIATRLTDITSEEAQRRVELPGAAEFARVLGGGLVPGSMVMIGGDPGVGKSTLLLQLAGRLAGXXXXXXXXXXXXSDTEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIGSVVYVSGEESTGQIAARAQRLGLQSPNLYLLAETDIHMICDGLEAMCPPPALVVIDSIQTMQSPDLSSAAGSTTQVRDTASCLLRLAKSTDIAVVIIGHVTKSGDIAGPRTVEHMVDTVLYLEGDPLNAYRLLRSVKNRFGSCHEIGVFEMTSLGLQEVANPSLLFTSTALGDDDEDGEGGGQAPDGTAVLVAMEGTRPLLCE--ALVTPSRMVAPRRAAEGVGQQRLQLLLAVLQRRLRYPTSSREVYVNVVGGLRLQ----------------------------------GELRMVQQLQRRIAEAGKYGFKRVVVP 596
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: A0A838RJB1_9CHLR (DNA repair protein RadA n=1 Tax=Ardenticatenales bacterium TaxID=2614248 RepID=A0A838RJB1_9CHLR) HSP 1 Score: 437 bits (1123), Expect = 5.440e-140 Identity = 246/507 (48.52%), Postives = 330/507 (65.09%), Query Frame = 3
Query: 1095 TVYVCEVCGSEHVQWVGRCPTCKEWNSVKP-FKVPREGGS-GLRQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLVQRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKLAGTTTGAGLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKGSKAKLPSGIEVVQCRSLKHAIDVGL 2609
TVY+C CG+EH +WVGRC C EWN+++ + PR GS G + +RAG VA L +I D+EA+ +RI LP E +RVLGGG+VPGS+ ++GGDPG+GKSTL+ Q++G LA LGP++Y+SGEES QV RA R +A+ LYL+SET++D+ + + +RP VI+DSIQT+ D++S GSISQV+EC+ RL+ +AKG + +FLVGHVTK G IAGPR +EH+VD VLYLEGD N++RLLR+ KNRFG++NE+GVFEM EGG+ EV NPSE FL A+ G+AV VTMEG+RP+L E+Q+LVT S PRRT++G+ + RL LLLAVL KR+G + +++V++NVVGGLR+ E A+DLA+A I SSY + RD +GE+GLGGE+R V QL++RL EAAK G+ R V PK G + GIEV+ RSL A+ + L
Sbjct: 6 TVYLCRECGAEHAKWVGRCRDCGEWNTLEETVQEPRASGSFGFGRQARAGTL----------------------------------VASNNLPLKIGDIEANAY-ERIPLPMEEFTRVLGGGVVPGSLVLVGGDPGIGKSTLLSQVSGMLAEA-----LGPVLYLSGEESVYQVKMRAERLGMADKDLYLLSETNLDIAIEHINTLRP--KAVIIDSIQTVYLQDLSSSAGSISQVRECAARLMQLAKGENLPIFLVGHVTKEGAIAGPRVLEHIVDTVLYLEGDRFNTFRLLRAQKNRFGSTNEVGVFEMVEGGMVEVPNPSEAFL--------ADYQAGATGSAVAVTMEGTRPILVEMQSLVTQSAFSQPRRTANGVDMNRLHLLLAVLGKRVGLQLFNQDVFVNVVGGLRISEPAADLAIAAAITSSYREKSIPRDLALVGEIGLGGELRPVSQLDKRLNEAAKLGFTRCVVPK--SGRRPLQAEGIEVIAVRSLVEALHLTL 460
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: A0A0N0RFU1_9CHLR (DNA repair protein RadA n=1 Tax=Ardenticatena maritima TaxID=872965 RepID=A0A0N0RFU1_9CHLR) HSP 1 Score: 425 bits (1092), Expect = 2.040e-135 Identity = 243/501 (48.50%), Postives = 321/501 (64.07%), Query Frame = 3
Query: 1095 TVYVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGLRQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLVQRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKLAGTTTGAGLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKGSKAKLPSGIEVVQCRSLKHAI 2597
TVYVCE CG+EH +W GRC TC +NS+K FK+ E PS +W+ A +R+T+VEA+ M QRI L E +RVLGGG+VPGS+ +IGGDPG+GKSTL+LQ+AG+LA G ++YVSGEES Q+ RA R I LYL+SET+++ I + + P VIVDSIQT+ +AS GS++QV+EC+ RL+ AK L + +FLVGHVTKSGDIAGPR +EH+VDAVLYLEGD L++YRLLRSVKNRFG+++E+GVFEM E G+ EV NPSELFL + + G A+ VT+EG+R LL E+QAL T + PRRT+ G L RL LL+AVL KR+G + ++++++NVVGGLR+ E A+DLAVAL I SSY P+ R IGE+GLGGE+R V QLE+RL EAAK G+ + PK + +A+ GI V+ C ++ A+
Sbjct: 8 TVYVCEECGAEHPKWGGRCLTCGAYNSLKEFKIAPE----------------------------------PSTRHTAQTWLG---ASDNPPRRLTEVEAEAM-QRIPLTNREFARVLGGGIVPGSLVLIGGDPGIGKSTLLLQVAGELAERQ-----GVVLYVSGEESTHQIRMRAERLGIHAADLYLLSETNLERIVAHIQHLHP--RAVIVDSIQTVYLDSLASSAGSVTQVRECAARLLQTAKILNIPIFLVGHVTKSGDIAGPRVLEHIVDAVLYLEGDRLHAYRLLRSVKNRFGSTHEVGVFEMAERGMLEVANPSELFLG--------DHRADPTGAAIAVTLEGTRALLVEIQALSTTTAFSQPRRTATGFDLNRLYLLIAVLTKRVGLKLHNQDIFVNVVGGLRIAEPAADLAVALAIASSYREKPISRRMAAIGEIGLGGELRPVGQLEKRLSEAAKLGFTHCLVPKTSRPVRAE---GIHVIPCGTVVEAL 452
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: A0A800BRF5_9CHLR (DNA repair protein RadA n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A800BRF5_9CHLR) HSP 1 Score: 424 bits (1090), Expect = 3.190e-135 Identity = 238/505 (47.13%), Postives = 324/505 (64.16%), Query Frame = 3
Query: 1095 TVYVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGLRQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLVQRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKLAGTTTGAGLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKGSKAKLPSGIEVVQCRSLKHAIDVGL 2609
T Y+C+ CG +W+GRCP C EWN++ V RE E +P S+ P TS P Q + + A E +RI +P ELSRVLGGG+VPGSV +IGGDPG+GKSTL+LQL+ LA G ++Y+SGEES Q+ RA R IA LY+++E ++D I + + + P +V+VDSIQ++ S ++ S GS+ QVKEC+ L+ +AK G+ +FLVGHVTK+G IAGP+ +EH+VDAVLYLEGD ++YRLLRSVKNRFG++NE+GVFEM + GL EV NPSE FL+ P N G+A+ VTMEG+RPLL E+QAL + + PRRT++G+ RLLLL+AVL KR+G +S +++++NVVGGL+++E A+DLA+A+ I SSY +PV D +GE+GL GE+R V QLERRL EAAK G+ R V PK + + K P G+EVV RS+ A++ L
Sbjct: 8 TAYICQNCGYSSPKWMGRCPNCGEWNTLVETVVERE----------------ERPRP---SVMP---TSEP--------------------QPLPQISA-EGFERIPVPIGELSRVLGGGIVPGSVVLIGGDPGIGKSTLLLQLSSLLASPD-----GAVLYISGEESPQQIKMRADRLGIANQALYILAEVNLDQIINHIERLNP--KMVVVDSIQSVYSEELMSAAGSVGQVKECASTLLRLAKATGIPIFLVGHVTKAGAIAGPKVLEHIVDAVLYLEGDRFHAYRLLRSVKNRFGSTNEVGVFEMGDRGLAEVANPSEAFLAERLP--------NASGSAIAVTMEGTRPLLVEIQALTSTTSFGHPRRTANGVDFNRLLLLVAVLSKRVGLRLSDQDIFVNVVGGLKVNEPAADLAIAVAIASSYKNVPVAADMAIVGEIGLSGELRAVSQLERRLSEAAKLGFRRCVVPKSLR-RRVKAPEGMEVVGVRSVGEALEAAL 453
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: UPI001AC69C1C (DNA repair protein RadA n=1 Tax=Thermoflexales bacterium TaxID=2497639 RepID=UPI001AC69C1C) HSP 1 Score: 419 bits (1077), Expect = 2.940e-133 Identity = 245/516 (47.48%), Postives = 331/516 (64.15%), Query Frame = 3
Query: 1074 SKSKTHITVYVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGLRQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLVQRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKLAGTTTGAGLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKGSKAKLPSG-IEVVQCRSLKHAIDVGLTRR 2618
+K+KT+ T +VC+ CGS ++W+GRCP C EWNS +V E S Q SRAG G +P A + R++DV+ D L RI + E SRVLGGG+VPG + ++ GDPG+GKSTL++Q+A ++A T GP++YVSGEESA Q+ RA+R QLYL++ETD+D I +A ++P L I+DSIQT+ +++ S GSISQV+EC+ RL +AKG G +VF+VGHVTKSG IAGP+ +EH+VD VLYLEGD ++YRLLRS KNRFGA+NE+GVFEM G+ EV+NPSE FL+ P N G+++ VTMEG+RPLL E+QAL + S PRRT++G+ + RLLLL AVL KR+G + ++V+ NV+GGL + E A+DLA+A I SS +PV D IGEVGL GE+R V QL RL EAAK G+AR + PK + A+LP IE+V RS+ A+ + L ++
Sbjct: 2 AKAKTY-TQFVCQQCGSVQLKWMGRCPDCGEWNSF--VEVIEERSS---QKSRAG-----GGQPRATPI------------------------------RLSDVKTDA-LDRIPMAMEEFSRVLGGGIVPGCLVLVSGDPGIGKSTLLMQVATQVAATH-----GPVLYVSGEESAQQIKMRAQRLGDDGQQLYLLTETDLDEINLHIANLKP--RLAIIDSIQTMTVSELTSAAGSISQVRECAARLQGVAKGSGTSVFIVGHVTKSGSIAGPKVLEHIVDTVLYLEGDRFHTYRLLRSTKNRFGATNEVGVFEMRGSGMAEVLNPSEAFLAERLP--------NAPGSSIAVTMEGTRPLLVEVQALCSTSAFGLPRRTANGLDMNRLLLLTAVLSKRVGLKLGDQDVFANVIGGLHITEPAADLAMACSIASSMRDVPVAVDLAIIGEVGLSGELRTVGQLPARLNEAAKLGFARALIPKTQRA--AELPQDKIEIVMARSVNEALTLALMKK 458
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: A0A532U2D3_9CHLR (DNA repair protein RadA n=1 Tax=Chloroflexi bacterium B3_Chlor TaxID=2012489 RepID=A0A532U2D3_9CHLR) HSP 1 Score: 419 bits (1077), Expect = 3.040e-133 Identity = 237/507 (46.75%), Postives = 323/507 (63.71%), Query Frame = 3
Query: 1098 VYVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGLRQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLVQRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKLAGTTTGAGLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKGSKAKLPSGIEVVQCRSLKHAIDVGLTRR 2618
++VC+ CG++ ++WVGRCP C EWNS+ RE S P + + QR+ ++ A E +R+ +P E SRVLGGG+VPGS +I GDPG+GKSTL+LQ+ L+ LG ++Y+SGEESA Q+ RA R I+ LYL++ETD+D I D + + P LV+VDSIQT+ ++AS G+ISQV+E + RL+H+AKG GV +F+VGHVTK G IAGPR +EHMVD VLYLEG+ +SYRLLR+VKNRFG+++E+GVFEM G+ EV NPSE FLS S EGT G+AV VT+EG+RPLL E+QAL + + PRRT++GI RLLLL+AVL KR+G + ++V++NVVGGL+++E A DL+VA+ I SS+ PV D IGE+GL GE+R + Q +RL EAA+ G+ R + P + SK + PS +EVV+ RSL A+DV L +R
Sbjct: 9 IHVCQQCGAQSLRWVGRCPDCGEWNSMVETVESRE------------------------------------------SSPPSSIVPRSKPQRLAEIPA-EGFRRLAVPMAEFSRVLGGGIVPGSTVLIAGDPGIGKSTLLLQVTAALSEQ-----LGEVLYISGEESAPQIKIRAERLGISTDGLYLLTETDMDAIMDHIHQLAP--RLVVVDSIQTVYVPELASAAGNISQVRESATRLIHLAKGEGVPIFMVGHVTKEGAIAGPRVLEHMVDTVLYLEGERFHSYRLLRTVKNRFGSTDEVGVFEMSGLGMLEVSNPSEAFLSERS------EGT---GSAVAVTLEGTRPLLVEIQALTSTTSFGLPRRTANGIDFNRLLLLVAVLSKRMGLRLHDQDVFVNVVGGLKINEPAVDLSVAVAIASSFRDTPVAHDLAIIGEIGLSGELRSISQATKRLNEAARLGFKRCLLPHPVRVSKDR-PSDLEVVRARSLGQALDVALGKR 455
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: A0A3M1ZYB4_9CHLR (DNA repair protein RadA n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1ZYB4_9CHLR) HSP 1 Score: 417 bits (1071), Expect = 2.420e-132 Identity = 235/505 (46.53%), Postives = 322/505 (63.76%), Query Frame = 3
Query: 1101 YVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGLRQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLVQRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKLAGTTTGAGLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKGSKAKLPSGIEVVQCRSLKHAIDVGLTR 2615
YVCE CG ++GRCP C E+ +++ V E + ++ RAG T+P ++ A+T+ DG +R+ +P TELSRVLGGG+VPGS+ ++GGDPG+GKSTL+L+LA +A GP++YVSGEES Q+ RA R + LYL+SET++ +I + + ++P+ LVIVDSIQT + D+ S GS+SQV+EC+ RL ++K G+ VFLVGHVTK G IAGPR +EH+VD VLYLEGD + YRLLRSVKNRFGA++E+GVFEM E G+ EV NPSE FL AE N G+A+ VT+EG+RPLL E+QAL + S +PRRT++G+ RLLLL AVL +R+ + ++V++NV+GGL++ E A+DLA+AL I SS P+H D +GE+GL GE+R V QLE RL+EAAK G+ R V P+ + P G+EV+ CRSL AI+V L +
Sbjct: 8 YVCESCGRVTAAYMGRCPQCGEFGTMQEEVVVPEETAVSPKNRRAG------TQPKSKPTPLAAITA-------------DG------------------FERLTIPMTELSRVLGGGIVPGSLVLVGGDPGIGKSTLLLELAAMIANQH-----GPVLYVSGEESTRQIKMRADRLKLQAQALYLVSETNLSVILEHVRELKPV--LVIVDSIQTTYAEDLKSSAGSVSQVRECASRLQELSKSAGITVFLVGHVTKEGAIAGPRVLEHIVDTVLYLEGDPFHRYRLLRSVKNRFGATSEVGVFEMVEQGMVEVPNPSEAFL--------AERQINAPGSAIAVTLEGTRPLLVEIQALASSSAFANPRRTANGVDYNRLLLLTAVLTRRVSMPLYDKDVFVNVIGGLQIREPAADLAIALAIASSIKDRPLHADLASVGEIGLSGELRAVSQLETRLKEAAKLGFRRCVVPRSTQRRLTNPPKGLEVIGCRSLAEAIEVALVK 460
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: A0A7C7UXY8_9CHLR (DNA repair protein RadA n=2 Tax=Anaerolineae TaxID=292625 RepID=A0A7C7UXY8_9CHLR) HSP 1 Score: 416 bits (1069), Expect = 4.180e-132 Identity = 241/509 (47.35%), Postives = 324/509 (63.65%), Query Frame = 3
Query: 1095 TVYVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGLRQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLVQRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKLAGTTTGAGLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKGSKAK--LPSGIEVVQCRSLKHAIDVGLTR 2615
T +VCE CG +W GRCP C WNSV +V + K AAR V+ P+ Q + + AD QRI +P EL+RVLGGG+VPGSV +IGGDPG+GKSTL+LQL+ LA GP++YVSGEESA Q+ RA R I++ QLY++SE +++ I + + P L +VDSIQ++ + + S G +SQVKEC+ L+ +AK GV +F+VGHVTK+G IAGPR +EH+VD VLYLEGD ++YRLLRSVKNRFG++NE+GVFEM GL EV NPSE FL+ P A G+A+ VTMEG+RPLL E+QAL + + PRRT++G+ RLLLL+AVL KR+G +S ++V++NVVGGLR++E A+DLAVA+ I SS+ +PV D +GE+GL GE+R V QL RRL EAAK G+ R + LPKG++ K +P+ IEV+ RS+ A++V L +
Sbjct: 6 TAFVCEQCGQIFPKWSGRCPECGTWNSVVETRVEADK-----------------EKRAAR------VSLVPASE----------------PQSLPTISADGF-QRIPVPMEELNRVLGGGIVPGSVVLIGGDPGIGKSTLLLQLSSLLAKQE-----GPVLYVSGEESAQQIKMRADRLGISDDQLYILSEINLEQIMGHIERLDP--RLAVVDSIQSVYTETLTSAAGGVSQVKECAATLLRLAKASGVPIFIVGHVTKAGAIAGPRVLEHIVDTVLYLEGDRFHAYRLLRSVKNRFGSTNEVGVFEMASQGLIEVTNPSEAFLAERLPTAA--------GSAIAVTMEGTRPLLVEIQALASTTSFGLPRRTANGVDFNRLLLLVAVLSKRVGLRLSDQDVFVNVVGGLRVNEPAADLAVAVAIASSFRDVPVAADLAVVGEIGLSGELRTVSQLPRRLGEAAKLGFRRCL---LPKGARWKKDMPAEIEVIGVRSVAEALEVALVK 456
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: A0A7V3HJJ0_9CHLR (DNA repair protein RadA n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7V3HJJ0_9CHLR) HSP 1 Score: 416 bits (1068), Expect = 5.870e-132 Identity = 235/507 (46.35%), Postives = 324/507 (63.91%), Query Frame = 3
Query: 1095 TVYVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGLRQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLVQRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKLAGTTTGAGLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKGSKAKLPSGIEVVQCRSLKHAIDVGLTR 2615
TVYVC+ CG+ +W GRCP C EWN++ V +R++S L + +P +T+ PS E + RIE+P EL+RVLGGG+VPGSV +I G+PG+GKSTL+LQLA LA ++ P++YVSGEES Q+ RA R + E LY+++ET ++ I + + M P +V+VDSIQ + S + S PGSI QV+EC+ + +AK G VFLVGHVTK+GDIAGP+ +EH VDAVLYLEGD ++YR+LRSVKNRFGA++E+GVFEM E GL+EV NPSE+FL AE N G+A+ VTMEGSRPLL E+QAL + + PRRT++GI L RLLLL+AVL KR+G ++S ++V++NVVGG+++ E A DLAVA+ I S + +PV D +GE+GL GE+R V+Q+ +RL EAA+ G+ + + P + + G+EVV RSL+ A+D+ L R
Sbjct: 6 TVYVCQNCGASFPKWAGRCPQCGEWNTLVEKVVE------VRKTSPRTL--------ITPTSEPVPITAVPS----------------------------EDVTRIEIPMLELNRVLGGGIVPGSVILIAGEPGIGKSTLLLQLASMLARESSR----PVLYVSGEESVRQIKMRAARLDVREENLYILAETSLEQILNHIERMEPF--VVVVDSIQAIYSEYLESTPGSIVQVRECAYAFLKMAKSTGTPVFLVGHVTKAGDIAGPKVLEHAVDAVLYLEGDPFHAYRILRSVKNRFGATSEVGVFEMEEQGLREVPNPSEIFL--------AERVPNASGSAIAVTMEGSRPLLVEIQALTSPTSFAIPRRTANGIDLSRLLLLIAVLTKRVGLHLSDQDVFVNVVGGIKIKEPAVDLAVAVAIASGFRNVPVAADLAIVGEIGLVGELRGVRQMTQRLAEAARLGFKKCLVPSGSVKAGQRTFDGMEVVPVRSLEEALDIALVR 456 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1043.2.1 >prot_C-australica_Contig_1043.2.1 ID=prot_C-australica_Contig_1043.2.1|Name=mRNA_C-australica_Contig_1043.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=666bp MGIAPRRRSFFTLALAAPLWSTAALAPPSNLTGFNLKGSTLAPNAWTTRGback to top mRNA from alignment at C-australica_Contig_1043:1244..9014- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1043.2.1 ID=mRNA_C-australica_Contig_1043.2.1|Name=mRNA_C-australica_Contig_1043.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=7771bp|location=Sequence derived from alignment at C-australica_Contig_1043:1244..9014- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1043:1244..9014- >mRNA_C-australica_Contig_1043.2.1 ID=mRNA_C-australica_Contig_1043.2.1|Name=mRNA_C-australica_Contig_1043.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1998bp|location=Sequence derived from alignment at C-australica_Contig_1043:1244..9014- (Chrysoparadoxa australica CS_1217)back to top |