mRNA_C-australica_Contig_1043.2.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1043.2.1
Unique NamemRNA_C-australica_Contig_1043.2.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: D7FMM0_ECTSI (DNA repair protein RadA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM0_ECTSI)

HSP 1 Score: 607 bits (1564), Expect = 1.210e-200
Identity = 347/616 (56.33%), Postives = 414/616 (67.21%), Query Frame = 3
Query: 1008 LPRMVSWGLNSRSPPSTRKALGSKSKTHITVYVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGLRQSSRAGLRS----GEGTKPAARSLDPRAVTSAPSGSFEHDS---WVPD-GVAGQGLVQRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKL---------------------------------AGTTTGAG---LGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKG-----------SKAKLPSG------------IEVVQCRSLKHAIDVGLTRRAYPHKYDPKKKG 2654
            +PRMVSWGLNSRS PS RKALGS  KTH  VYVCEVCGSEHVQWVGRCPTCKEWN VKPFKV RE GS   + SRA   S      G    A   DP   +    G+F       W+P+ G A   L+  + + E      R+ LPGTEL RVLGGGLVPGS+ M+GGDPGVGKSTL+LQLAG+L                                 A   T A     G +VY+SGEE+ +QVA+RA R  I    L+L  ETDID+I DQ+  M+P PALV+VDSIQT+ + D  S PGS++QVKEC+ RLV +AKG G+ VF+VGHVTKSG IAGP+ VEHMVD VLYLEGD  NSYRLLRSVKNRFG SNEIGVF+M  GGL +V +PS LFLS  +  D  +   ++DG+AV V MEGSRP+LCELQ+LVT+++LPSPRRTSDG+ +PRLLLLLAVLQKRLGY+MSSREVYLN+VGGL++ E A+DLAVAL +VSSYT IPV  DTCFIGE+GLGGE+R VQQL RR+QEA  FG++RVV P   K             KA++ +G            IEV++CR+LK A+  GLT         PKK+G
Sbjct:  112 MPRMVSWGLNSRSQPSARKALGSNKKTHTIVYVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSSPSRVSRAAAASVTAGARGGGRGASGGDPE-FSGLGGGAFGGSGGAGWLPEEGFAAPTLLSEVGEAEKQG---RMPLPGTELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDATPVTEAERCRAGTVVYISGEENNSQVAARAARMGIGGVDLFLYCETDIDVIIDQMLVMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMEAGGLDDVADPSMLFLSDKN-VDDDDHAEHMDGSAVCVYMEGSRPILCELQSLVTYTRLPSPRRTSDGLPIPRLLLLLAVLQKRLGYDMSSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRPDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVPFTRKNRSARSRGGGRAGKARVAAGVSEAGNDGRRGAIEVIECRNLKDAVAAGLTAV-------PKKRG 715          
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: A0A836CK68_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK68_9STRA)

HSP 1 Score: 469 bits (1206), Expect = 1.580e-149
Identity = 276/561 (49.20%), Postives = 335/561 (59.71%), Query Frame = 3
Query: 1011 PRMVSWGLNSRSPPSTRKALGSKSKTHITVYVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGLRQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLVQRITDVEADEMLQRIELPGT-ELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKLAGTTTGA------------------------------------------------------GLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTA---SPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTP 2519
            PR +S+GL SRS PSTRKALGS SKTH TVYVCEVCG+E VQWVGRCPTCKEWNSV+  KV R+G                                          W+  G  G G+  R+TD+ ++E  +R+ELPG  E +RVLGGGLVPGS+ MIGGDPGVGKSTL+LQLAG+LAG                                                            +G +VYVSGEES  Q+A+RA+R  +  P LYL++ETDI +I D L AM P PALV++DSIQT+ S D++S  GS +QV++ +  L+ +AK   +AV ++GHVTKSGDIAGPRTVEHMVD VLYLEGD LN+YRLLRSVKNRFG+ +EIGVFEM   GL+EV NPS LF STA      D    G   DGTAV+V MEG+RPLLCE  ALVT S++ +PRR ++G+   RL LLLAVLQ+RL Y  SSREVY+NVVGGLRL                                   GE+RMVQQL+RR+ EA K+G+ RVV P
Sbjct:   85 PRFISYGLQSRSAPSTRKALGSGSKTHATVYVCEVCGAEQVQWVGRCPTCKEWNSVREHKVRRDGXXXXXXXXXXXX-------------XXXXXXXXXXXXXXXAGWLVPGADGYGIATRLTDITSEEAQRRVELPGAAEFARVLGGGLVPGSMVMIGGDPGVGKSTLLLQLAGRLAGXXXXXXXXXXXXSDTEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIGSVVYVSGEESTGQIAARAQRLGLQSPNLYLLAETDIHMICDGLEAMCPPPALVVIDSIQTMQSPDLSSAAGSTTQVRDTASCLLRLAKSTDIAVVIIGHVTKSGDIAGPRTVEHMVDTVLYLEGDPLNAYRLLRSVKNRFGSCHEIGVFEMTSLGLQEVANPSLLFTSTALGDDDEDGEGGGQAPDGTAVLVAMEGTRPLLCE--ALVTPSRMVAPRRAAEGVGQQRLQLLLAVLQRRLRYPTSSREVYVNVVGGLRLQ----------------------------------GELRMVQQLQRRIAEAGKYGFKRVVVP 596          
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: A0A838RJB1_9CHLR (DNA repair protein RadA n=1 Tax=Ardenticatenales bacterium TaxID=2614248 RepID=A0A838RJB1_9CHLR)

HSP 1 Score: 437 bits (1123), Expect = 5.440e-140
Identity = 246/507 (48.52%), Postives = 330/507 (65.09%), Query Frame = 3
Query: 1095 TVYVCEVCGSEHVQWVGRCPTCKEWNSVKP-FKVPREGGS-GLRQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLVQRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKLAGTTTGAGLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKGSKAKLPSGIEVVQCRSLKHAIDVGL 2609
            TVY+C  CG+EH +WVGRC  C EWN+++   + PR  GS G  + +RAG                                    VA   L  +I D+EA+   +RI LP  E +RVLGGG+VPGS+ ++GGDPG+GKSTL+ Q++G LA       LGP++Y+SGEES  QV  RA R  +A+  LYL+SET++D+  + +  +RP    VI+DSIQT+   D++S  GSISQV+EC+ RL+ +AKG  + +FLVGHVTK G IAGPR +EH+VD VLYLEGD  N++RLLR+ KNRFG++NE+GVFEM EGG+ EV NPSE FL        A+      G+AV VTMEG+RP+L E+Q+LVT S    PRRT++G+ + RL LLLAVL KR+G  + +++V++NVVGGLR+ E A+DLA+A  I SSY    + RD   +GE+GLGGE+R V QL++RL EAAK G+ R V PK   G +     GIEV+  RSL  A+ + L
Sbjct:    6 TVYLCRECGAEHAKWVGRCRDCGEWNTLEETVQEPRASGSFGFGRQARAGTL----------------------------------VASNNLPLKIGDIEANAY-ERIPLPMEEFTRVLGGGVVPGSLVLVGGDPGIGKSTLLSQVSGMLAEA-----LGPVLYLSGEESVYQVKMRAERLGMADKDLYLLSETNLDIAIEHINTLRP--KAVIIDSIQTVYLQDLSSSAGSISQVRECAARLMQLAKGENLPIFLVGHVTKEGAIAGPRVLEHIVDTVLYLEGDRFNTFRLLRAQKNRFGSTNEVGVFEMVEGGMVEVPNPSEAFL--------ADYQAGATGSAVAVTMEGTRPILVEMQSLVTQSAFSQPRRTANGVDMNRLHLLLAVLGKRVGLQLFNQDVFVNVVGGLRISEPAADLAIAAAITSSYREKSIPRDLALVGEIGLGGELRPVSQLDKRLNEAAKLGFTRCVVPK--SGRRPLQAEGIEVIAVRSLVEALHLTL 460          
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: A0A0N0RFU1_9CHLR (DNA repair protein RadA n=1 Tax=Ardenticatena maritima TaxID=872965 RepID=A0A0N0RFU1_9CHLR)

HSP 1 Score: 425 bits (1092), Expect = 2.040e-135
Identity = 243/501 (48.50%), Postives = 321/501 (64.07%), Query Frame = 3
Query: 1095 TVYVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGLRQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLVQRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKLAGTTTGAGLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKGSKAKLPSGIEVVQCRSLKHAI 2597
            TVYVCE CG+EH +W GRC TC  +NS+K FK+  E                                  PS      +W+    A     +R+T+VEA+ M QRI L   E +RVLGGG+VPGS+ +IGGDPG+GKSTL+LQ+AG+LA        G ++YVSGEES  Q+  RA R  I    LYL+SET+++ I   +  + P    VIVDSIQT+    +AS  GS++QV+EC+ RL+  AK L + +FLVGHVTKSGDIAGPR +EH+VDAVLYLEGD L++YRLLRSVKNRFG+++E+GVFEM E G+ EV NPSELFL         +   +  G A+ VT+EG+R LL E+QAL T +    PRRT+ G  L RL LL+AVL KR+G  + ++++++NVVGGLR+ E A+DLAVAL I SSY   P+ R    IGE+GLGGE+R V QLE+RL EAAK G+   + PK  +  +A+   GI V+ C ++  A+
Sbjct:    8 TVYVCEECGAEHPKWGGRCLTCGAYNSLKEFKIAPE----------------------------------PSTRHTAQTWLG---ASDNPPRRLTEVEAEAM-QRIPLTNREFARVLGGGIVPGSLVLIGGDPGIGKSTLLLQVAGELAERQ-----GVVLYVSGEESTHQIRMRAERLGIHAADLYLLSETNLERIVAHIQHLHP--RAVIVDSIQTVYLDSLASSAGSVTQVRECAARLLQTAKILNIPIFLVGHVTKSGDIAGPRVLEHIVDAVLYLEGDRLHAYRLLRSVKNRFGSTHEVGVFEMAERGMLEVANPSELFLG--------DHRADPTGAAIAVTLEGTRALLVEIQALSTTTAFSQPRRTATGFDLNRLYLLIAVLTKRVGLKLHNQDIFVNVVGGLRIAEPAADLAVALAIASSYREKPISRRMAAIGEIGLGGELRPVGQLEKRLSEAAKLGFTHCLVPKTSRPVRAE---GIHVIPCGTVVEAL 452          
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: A0A800BRF5_9CHLR (DNA repair protein RadA n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A800BRF5_9CHLR)

HSP 1 Score: 424 bits (1090), Expect = 3.190e-135
Identity = 238/505 (47.13%), Postives = 324/505 (64.16%), Query Frame = 3
Query: 1095 TVYVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGLRQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLVQRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKLAGTTTGAGLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKGSKAKLPSGIEVVQCRSLKHAIDVGL 2609
            T Y+C+ CG    +W+GRCP C EWN++    V RE                E  +P   S+ P   TS P                    Q +  + A E  +RI +P  ELSRVLGGG+VPGSV +IGGDPG+GKSTL+LQL+  LA        G ++Y+SGEES  Q+  RA R  IA   LY+++E ++D I + +  + P   +V+VDSIQ++ S ++ S  GS+ QVKEC+  L+ +AK  G+ +FLVGHVTK+G IAGP+ +EH+VDAVLYLEGD  ++YRLLRSVKNRFG++NE+GVFEM + GL EV NPSE FL+   P        N  G+A+ VTMEG+RPLL E+QAL + +    PRRT++G+   RLLLL+AVL KR+G  +S +++++NVVGGL+++E A+DLA+A+ I SSY  +PV  D   +GE+GL GE+R V QLERRL EAAK G+ R V PK  +  + K P G+EVV  RS+  A++  L
Sbjct:    8 TAYICQNCGYSSPKWMGRCPNCGEWNTLVETVVERE----------------ERPRP---SVMP---TSEP--------------------QPLPQISA-EGFERIPVPIGELSRVLGGGIVPGSVVLIGGDPGIGKSTLLLQLSSLLASPD-----GAVLYISGEESPQQIKMRADRLGIANQALYILAEVNLDQIINHIERLNP--KMVVVDSIQSVYSEELMSAAGSVGQVKECASTLLRLAKATGIPIFLVGHVTKAGAIAGPKVLEHIVDAVLYLEGDRFHAYRLLRSVKNRFGSTNEVGVFEMGDRGLAEVANPSEAFLAERLP--------NASGSAIAVTMEGTRPLLVEIQALTSTTSFGHPRRTANGVDFNRLLLLVAVLSKRVGLRLSDQDIFVNVVGGLKVNEPAADLAIAVAIASSYKNVPVAADMAIVGEIGLSGELRAVSQLERRLSEAAKLGFRRCVVPKSLR-RRVKAPEGMEVVGVRSVGEALEAAL 453          
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: UPI001AC69C1C (DNA repair protein RadA n=1 Tax=Thermoflexales bacterium TaxID=2497639 RepID=UPI001AC69C1C)

HSP 1 Score: 419 bits (1077), Expect = 2.940e-133
Identity = 245/516 (47.48%), Postives = 331/516 (64.15%), Query Frame = 3
Query: 1074 SKSKTHITVYVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGLRQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLVQRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKLAGTTTGAGLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKGSKAKLPSG-IEVVQCRSLKHAIDVGLTRR 2618
            +K+KT+ T +VC+ CGS  ++W+GRCP C EWNS    +V  E  S   Q SRAG     G +P A  +                              R++DV+ D  L RI +   E SRVLGGG+VPG + ++ GDPG+GKSTL++Q+A ++A T      GP++YVSGEESA Q+  RA+R      QLYL++ETD+D I   +A ++P   L I+DSIQT+  +++ S  GSISQV+EC+ RL  +AKG G +VF+VGHVTKSG IAGP+ +EH+VD VLYLEGD  ++YRLLRS KNRFGA+NE+GVFEM   G+ EV+NPSE FL+   P        N  G+++ VTMEG+RPLL E+QAL + S    PRRT++G+ + RLLLL AVL KR+G  +  ++V+ NV+GGL + E A+DLA+A  I SS   +PV  D   IGEVGL GE+R V QL  RL EAAK G+AR + PK  +   A+LP   IE+V  RS+  A+ + L ++
Sbjct:    2 AKAKTY-TQFVCQQCGSVQLKWMGRCPDCGEWNSF--VEVIEERSS---QKSRAG-----GGQPRATPI------------------------------RLSDVKTDA-LDRIPMAMEEFSRVLGGGIVPGCLVLVSGDPGIGKSTLLMQVATQVAATH-----GPVLYVSGEESAQQIKMRAQRLGDDGQQLYLLTETDLDEINLHIANLKP--RLAIIDSIQTMTVSELTSAAGSISQVRECAARLQGVAKGSGTSVFIVGHVTKSGSIAGPKVLEHIVDTVLYLEGDRFHTYRLLRSTKNRFGATNEVGVFEMRGSGMAEVLNPSEAFLAERLP--------NAPGSSIAVTMEGTRPLLVEVQALCSTSAFGLPRRTANGLDMNRLLLLTAVLSKRVGLKLGDQDVFANVIGGLHITEPAADLAMACSIASSMRDVPVAVDLAIIGEVGLSGELRTVGQLPARLNEAAKLGFARALIPKTQRA--AELPQDKIEIVMARSVNEALTLALMKK 458          
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: A0A532U2D3_9CHLR (DNA repair protein RadA n=1 Tax=Chloroflexi bacterium B3_Chlor TaxID=2012489 RepID=A0A532U2D3_9CHLR)

HSP 1 Score: 419 bits (1077), Expect = 3.040e-133
Identity = 237/507 (46.75%), Postives = 323/507 (63.71%), Query Frame = 3
Query: 1098 VYVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGLRQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLVQRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKLAGTTTGAGLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKGSKAKLPSGIEVVQCRSLKHAIDVGLTRR 2618
            ++VC+ CG++ ++WVGRCP C EWNS+      RE                                          S  P  +  +   QR+ ++ A E  +R+ +P  E SRVLGGG+VPGS  +I GDPG+GKSTL+LQ+   L+       LG ++Y+SGEESA Q+  RA R  I+   LYL++ETD+D I D +  + P   LV+VDSIQT+   ++AS  G+ISQV+E + RL+H+AKG GV +F+VGHVTK G IAGPR +EHMVD VLYLEG+  +SYRLLR+VKNRFG+++E+GVFEM   G+ EV NPSE FLS  S      EGT   G+AV VT+EG+RPLL E+QAL + +    PRRT++GI   RLLLL+AVL KR+G  +  ++V++NVVGGL+++E A DL+VA+ I SS+   PV  D   IGE+GL GE+R + Q  +RL EAA+ G+ R + P   + SK + PS +EVV+ RSL  A+DV L +R
Sbjct:    9 IHVCQQCGAQSLRWVGRCPDCGEWNSMVETVESRE------------------------------------------SSPPSSIVPRSKPQRLAEIPA-EGFRRLAVPMAEFSRVLGGGIVPGSTVLIAGDPGIGKSTLLLQVTAALSEQ-----LGEVLYISGEESAPQIKIRAERLGISTDGLYLLTETDMDAIMDHIHQLAP--RLVVVDSIQTVYVPELASAAGNISQVRESATRLIHLAKGEGVPIFMVGHVTKEGAIAGPRVLEHMVDTVLYLEGERFHSYRLLRTVKNRFGSTDEVGVFEMSGLGMLEVSNPSEAFLSERS------EGT---GSAVAVTLEGTRPLLVEIQALTSTTSFGLPRRTANGIDFNRLLLLVAVLSKRMGLRLHDQDVFVNVVGGLKINEPAVDLSVAVAIASSFRDTPVAHDLAIIGEIGLSGELRSISQATKRLNEAARLGFKRCLLPHPVRVSKDR-PSDLEVVRARSLGQALDVALGKR 455          
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: A0A3M1ZYB4_9CHLR (DNA repair protein RadA n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1ZYB4_9CHLR)

HSP 1 Score: 417 bits (1071), Expect = 2.420e-132
Identity = 235/505 (46.53%), Postives = 322/505 (63.76%), Query Frame = 3
Query: 1101 YVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGLRQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLVQRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKLAGTTTGAGLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKGSKAKLPSGIEVVQCRSLKHAIDVGLTR 2615
            YVCE CG     ++GRCP C E+ +++   V  E  +   ++ RAG      T+P ++     A+T+             DG                   +R+ +P TELSRVLGGG+VPGS+ ++GGDPG+GKSTL+L+LA  +A        GP++YVSGEES  Q+  RA R  +    LYL+SET++ +I + +  ++P+  LVIVDSIQT  + D+ S  GS+SQV+EC+ RL  ++K  G+ VFLVGHVTK G IAGPR +EH+VD VLYLEGD  + YRLLRSVKNRFGA++E+GVFEM E G+ EV NPSE FL        AE   N  G+A+ VT+EG+RPLL E+QAL + S   +PRRT++G+   RLLLL AVL +R+   +  ++V++NV+GGL++ E A+DLA+AL I SS    P+H D   +GE+GL GE+R V QLE RL+EAAK G+ R V P+  +      P G+EV+ CRSL  AI+V L +
Sbjct:    8 YVCESCGRVTAAYMGRCPQCGEFGTMQEEVVVPEETAVSPKNRRAG------TQPKSKPTPLAAITA-------------DG------------------FERLTIPMTELSRVLGGGIVPGSLVLVGGDPGIGKSTLLLELAAMIANQH-----GPVLYVSGEESTRQIKMRADRLKLQAQALYLVSETNLSVILEHVRELKPV--LVIVDSIQTTYAEDLKSSAGSVSQVRECASRLQELSKSAGITVFLVGHVTKEGAIAGPRVLEHIVDTVLYLEGDPFHRYRLLRSVKNRFGATSEVGVFEMVEQGMVEVPNPSEAFL--------AERQINAPGSAIAVTLEGTRPLLVEIQALASSSAFANPRRTANGVDYNRLLLLTAVLTRRVSMPLYDKDVFVNVIGGLQIREPAADLAIALAIASSIKDRPLHADLASVGEIGLSGELRAVSQLETRLKEAAKLGFRRCVVPRSTQRRLTNPPKGLEVIGCRSLAEAIEVALVK 460          
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: A0A7C7UXY8_9CHLR (DNA repair protein RadA n=2 Tax=Anaerolineae TaxID=292625 RepID=A0A7C7UXY8_9CHLR)

HSP 1 Score: 416 bits (1069), Expect = 4.180e-132
Identity = 241/509 (47.35%), Postives = 324/509 (63.65%), Query Frame = 3
Query: 1095 TVYVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGLRQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLVQRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKLAGTTTGAGLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKGSKAK--LPSGIEVVQCRSLKHAIDVGLTR 2615
            T +VCE CG    +W GRCP C  WNSV   +V  +                   K AAR      V+  P+                   Q +  + AD   QRI +P  EL+RVLGGG+VPGSV +IGGDPG+GKSTL+LQL+  LA        GP++YVSGEESA Q+  RA R  I++ QLY++SE +++ I   +  + P   L +VDSIQ++ +  + S  G +SQVKEC+  L+ +AK  GV +F+VGHVTK+G IAGPR +EH+VD VLYLEGD  ++YRLLRSVKNRFG++NE+GVFEM   GL EV NPSE FL+   P  A        G+A+ VTMEG+RPLL E+QAL + +    PRRT++G+   RLLLL+AVL KR+G  +S ++V++NVVGGLR++E A+DLAVA+ I SS+  +PV  D   +GE+GL GE+R V QL RRL EAAK G+ R +   LPKG++ K  +P+ IEV+  RS+  A++V L +
Sbjct:    6 TAFVCEQCGQIFPKWSGRCPECGTWNSVVETRVEADK-----------------EKRAAR------VSLVPASE----------------PQSLPTISADGF-QRIPVPMEELNRVLGGGIVPGSVVLIGGDPGIGKSTLLLQLSSLLAKQE-----GPVLYVSGEESAQQIKMRADRLGISDDQLYILSEINLEQIMGHIERLDP--RLAVVDSIQSVYTETLTSAAGGVSQVKECAATLLRLAKASGVPIFIVGHVTKAGAIAGPRVLEHIVDTVLYLEGDRFHAYRLLRSVKNRFGSTNEVGVFEMASQGLIEVTNPSEAFLAERLPTAA--------GSAIAVTMEGTRPLLVEIQALASTTSFGLPRRTANGVDFNRLLLLVAVLSKRVGLRLSDQDVFVNVVGGLRVNEPAADLAVAVAIASSFRDVPVAADLAVVGEIGLSGELRTVSQLPRRLGEAAKLGFRRCL---LPKGARWKKDMPAEIEVIGVRSVAEALEVALVK 456          
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Match: A0A7V3HJJ0_9CHLR (DNA repair protein RadA n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7V3HJJ0_9CHLR)

HSP 1 Score: 416 bits (1068), Expect = 5.870e-132
Identity = 235/507 (46.35%), Postives = 324/507 (63.91%), Query Frame = 3
Query: 1095 TVYVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGLRQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLVQRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLMLQLAGKLAGTTTGAGLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSETDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRLVHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLLRSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLDGTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQKRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCFIGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKGSKAKLPSGIEVVQCRSLKHAIDVGLTR 2615
            TVYVC+ CG+   +W GRCP C EWN++    V       +R++S   L           + +P  +T+ PS                            E + RIE+P  EL+RVLGGG+VPGSV +I G+PG+GKSTL+LQLA  LA  ++     P++YVSGEES  Q+  RA R  + E  LY+++ET ++ I + +  M P   +V+VDSIQ + S  + S PGSI QV+EC+   + +AK  G  VFLVGHVTK+GDIAGP+ +EH VDAVLYLEGD  ++YR+LRSVKNRFGA++E+GVFEM E GL+EV NPSE+FL        AE   N  G+A+ VTMEGSRPLL E+QAL + +    PRRT++GI L RLLLL+AVL KR+G ++S ++V++NVVGG+++ E A DLAVA+ I S +  +PV  D   +GE+GL GE+R V+Q+ +RL EAA+ G+ + + P     +  +   G+EVV  RSL+ A+D+ L R
Sbjct:    6 TVYVCQNCGASFPKWAGRCPQCGEWNTLVEKVVE------VRKTSPRTL--------ITPTSEPVPITAVPS----------------------------EDVTRIEIPMLELNRVLGGGIVPGSVILIAGEPGIGKSTLLLQLASMLARESSR----PVLYVSGEESVRQIKMRAARLDVREENLYILAETSLEQILNHIERMEPF--VVVVDSIQAIYSEYLESTPGSIVQVRECAYAFLKMAKSTGTPVFLVGHVTKAGDIAGPKVLEHAVDAVLYLEGDPFHAYRILRSVKNRFGATSEVGVFEMEEQGLREVPNPSEIFL--------AERVPNASGSAIAVTMEGSRPLLVEIQALTSPTSFAIPRRTANGIDLSRLLLLIAVLTKRVGLHLSDQDVFVNVVGGIKIKEPAVDLAVAVAIASGFRNVPVAADLAIVGEIGLVGELRGVRQMTQRLAEAARLGFKKCLVPSGSVKAGQRTFDGMEVVPVRSLEEALDIALVR 456          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1043.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMM0_ECTSI1.210e-20056.33DNA repair protein RadA n=1 Tax=Ectocarpus silicul... [more]
A0A836CK68_9STRA1.580e-14949.20P-loop containing nucleoside triphosphate hydrolas... [more]
A0A838RJB1_9CHLR5.440e-14048.52DNA repair protein RadA n=1 Tax=Ardenticatenales b... [more]
A0A0N0RFU1_9CHLR2.040e-13548.50DNA repair protein RadA n=1 Tax=Ardenticatena mari... [more]
A0A800BRF5_9CHLR3.190e-13547.13DNA repair protein RadA n=1 Tax=Anaerolineae bacte... [more]
UPI001AC69C1C2.940e-13347.48DNA repair protein RadA n=1 Tax=Thermoflexales bac... [more]
A0A532U2D3_9CHLR3.040e-13346.75DNA repair protein RadA n=1 Tax=Chloroflexi bacter... [more]
A0A3M1ZYB4_9CHLR2.420e-13246.53DNA repair protein RadA n=1 Tax=Chloroflexi bacter... [more]
A0A7C7UXY8_9CHLR4.180e-13247.35DNA repair protein RadA n=2 Tax=Anaerolineae TaxID... [more]
A0A7V3HJJ0_9CHLR5.870e-13246.35DNA repair protein RadA n=1 Tax=Anaerolineae bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1043contigC-australica_Contig_1043:1244..9014 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FMM0
PFAMsAAA_25,ChlI,Lon_C
Model size3057
Max annot lvl2759|Eukaryota
KEGG koko:K04485
Hectar predicted targeting categorysignal peptide
Exons29
Evalue2.15e-206
EggNOG OGsCOG1066@1|root,2QQ01@2759|Eukaryota
DescriptionAAA domain
Cds size1998
COG categoryO
BRITEko00000,ko03400
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586779.7496114-UTR-C-australica_Contig_1043:1243..15351682586779.7496114-UTR-C-australica_Contig_1043:1243..1535Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1043 1244..1535 -
1682586779.9911315-UTR-C-australica_Contig_1043:7434..75421682586779.9911315-UTR-C-australica_Contig_1043:7434..7542Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1043 7435..7542 -
1682586780.0010912-UTR-C-australica_Contig_1043:7875..80141682586780.0010912-UTR-C-australica_Contig_1043:7875..8014Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1043 7876..8014 -
1682586780.0107465-UTR-C-australica_Contig_1043:8078..81151682586780.0107465-UTR-C-australica_Contig_1043:8078..8115Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1043 8079..8115 -
1682586780.020236-UTR-C-australica_Contig_1043:8196..83001682586780.020236-UTR-C-australica_Contig_1043:8196..8300Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1043 8197..8300 -
1682586780.0296326-UTR-C-australica_Contig_1043:8379..85801682586780.0296326-UTR-C-australica_Contig_1043:8379..8580Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1043 8380..8580 -
1682586780.0396347-UTR-C-australica_Contig_1043:8657..87661682586780.0396347-UTR-C-australica_Contig_1043:8657..8766Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1043 8658..8766 -
1682586780.0493097-UTR-C-australica_Contig_1043:8945..90141682586780.0493097-UTR-C-australica_Contig_1043:8945..9014Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1043 8946..9014 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586779.7584207-CDS-C-australica_Contig_1043:1535..17221682586779.7584207-CDS-C-australica_Contig_1043:1535..1722Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 1536..1722 -
1682586779.7667184-CDS-C-australica_Contig_1043:1909..20071682586779.7667184-CDS-C-australica_Contig_1043:1909..2007Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 1910..2007 -
1682586779.775275-CDS-C-australica_Contig_1043:2174..22501682586779.775275-CDS-C-australica_Contig_1043:2174..2250Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 2175..2250 -
1682586779.7841687-CDS-C-australica_Contig_1043:2517..26211682586779.7841687-CDS-C-australica_Contig_1043:2517..2621Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 2518..2621 -
1682586779.7949965-CDS-C-australica_Contig_1043:2994..30741682586779.7949965-CDS-C-australica_Contig_1043:2994..3074Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 2995..3074 -
1682586779.8026655-CDS-C-australica_Contig_1043:3167..32071682586779.8026655-CDS-C-australica_Contig_1043:3167..3207Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 3168..3207 -
1682586779.810133-CDS-C-australica_Contig_1043:3299..33771682586779.810133-CDS-C-australica_Contig_1043:3299..3377Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 3300..3377 -
1682586779.8187258-CDS-C-australica_Contig_1043:3599..36731682586779.8187258-CDS-C-australica_Contig_1043:3599..3673Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 3600..3673 -
1682586779.828392-CDS-C-australica_Contig_1043:3838..38971682586779.828392-CDS-C-australica_Contig_1043:3838..3897Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 3839..3897 -
1682586779.8381853-CDS-C-australica_Contig_1043:4085..41981682586779.8381853-CDS-C-australica_Contig_1043:4085..4198Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 4086..4198 -
1682586779.8480456-CDS-C-australica_Contig_1043:4308..43711682586779.8480456-CDS-C-australica_Contig_1043:4308..4371Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 4309..4371 -
1682586779.8575733-CDS-C-australica_Contig_1043:4506..46051682586779.8575733-CDS-C-australica_Contig_1043:4506..4605Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 4507..4605 -
1682586779.8698232-CDS-C-australica_Contig_1043:4823..49251682586779.8698232-CDS-C-australica_Contig_1043:4823..4925Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 4824..4925 -
1682586779.8779223-CDS-C-australica_Contig_1043:5026..50641682586779.8779223-CDS-C-australica_Contig_1043:5026..5064Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 5027..5064 -
1682586779.8863275-CDS-C-australica_Contig_1043:5389..54651682586779.8863275-CDS-C-australica_Contig_1043:5389..5465Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 5390..5465 -
1682586779.894942-CDS-C-australica_Contig_1043:5585..56421682586779.894942-CDS-C-australica_Contig_1043:5585..5642Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 5586..5642 -
1682586779.9125283-CDS-C-australica_Contig_1043:5928..60761682586779.9125283-CDS-C-australica_Contig_1043:5928..6076Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 5929..6076 -
1682586779.9251196-CDS-C-australica_Contig_1043:6316..63831682586779.9251196-CDS-C-australica_Contig_1043:6316..6383Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 6317..6383 -
1682586779.9348676-CDS-C-australica_Contig_1043:6472..65811682586779.9348676-CDS-C-australica_Contig_1043:6472..6581Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 6473..6581 -
1682586779.9486616-CDS-C-australica_Contig_1043:6769..68511682586779.9486616-CDS-C-australica_Contig_1043:6769..6851Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 6770..6851 -
1682586779.957403-CDS-C-australica_Contig_1043:6993..70591682586779.957403-CDS-C-australica_Contig_1043:6993..7059Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 6994..7059 -
1682586779.971277-CDS-C-australica_Contig_1043:7182..72511682586779.971277-CDS-C-australica_Contig_1043:7182..7251Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 7183..7251 -
1682586779.9813714-CDS-C-australica_Contig_1043:7321..74341682586779.9813714-CDS-C-australica_Contig_1043:7321..7434Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1043 7322..7434 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1043.2.1prot_C-australica_Contig_1043.2.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1043 1536..7434 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1043.2.1

>prot_C-australica_Contig_1043.2.1 ID=prot_C-australica_Contig_1043.2.1|Name=mRNA_C-australica_Contig_1043.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=666bp
MGIAPRRRSFFTLALAAPLWSTAALAPPSNLTGFNLKGSTLAPNAWTTRG
RRSYMEMMSEEYAGDGEGRAPSGGGSGDKRLPRMVSWGLNSRSPPSTRKA
LGSKSKTHITVYVCEVCGSEHVQWVGRCPTCKEWNSVKPFKVPREGGSGL
RQSSRAGLRSGEGTKPAARSLDPRAVTSAPSGSFEHDSWVPDGVAGQGLV
QRITDVEADEMLQRIELPGTELSRVLGGGLVPGSVAMIGGDPGVGKSTLM
LQLAGKLAGTTTGAGLGPIVYVSGEESAAQVASRARRFSIAEPQLYLMSE
TDIDLITDQLAAMRPLPALVIVDSIQTLCSADIASGPGSISQVKECSGRL
VHIAKGLGVAVFLVGHVTKSGDIAGPRTVEHMVDAVLYLEGDSLNSYRLL
RSVKNRFGASNEIGVFEMHEGGLKEVVNPSELFLSTASPADAAEEGTNLD
GTAVMVTMEGSRPLLCELQALVTFSKLPSPRRTSDGIHLPRLLLLLAVLQ
KRLGYNMSSREVYLNVVGGLRLHEAASDLAVALVIVSSYTGIPVHRDTCF
IGEVGLGGEVRMVQQLERRLQEAAKFGYARVVTPKLPKGSKAKLPSGIEV
VQCRSLKHAIDVGLTRRAYPHKYDPKKKGRRQGQDQYQDDRASNQEETEE
AEDDEGWGDGWGDAA*
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mRNA from alignment at C-australica_Contig_1043:1244..9014-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1043.2.1 ID=mRNA_C-australica_Contig_1043.2.1|Name=mRNA_C-australica_Contig_1043.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=7771bp|location=Sequence derived from alignment at C-australica_Contig_1043:1244..9014- (Chrysoparadoxa australica CS_1217)
TTAAGTTTGGCTTGCTTCATGGCTGCATTGAGGAACTGAACTAGCACAAA CTCTGAGACACCCTGAGGGGTAGGGTTAGGGTAGGTGAGGTGACTGGCTT GACTGGCTTTAAGTCACCGGCTTTGCTTTAGGCCACTGGCTTTAAGCCAA TACTTGCCAATGGTTTTAGGTTAATGATTCTTGAGTAATTCCTTGTAGGC CACAGGCCAGGTCAGGTCAGGCGCTCATGTCATCTCATGCCTTCGTAGCA TCCACCTGAGGCGTATTCCCAACAAACAGCTCGAGCAATGTCTTGTCCAC AGCAGGCTTTGCTGTGCCAGAGGCCAGCACTGCAGCACTTGTCGCAGGGT TGACTGCAGGGAAGGAGAGAAGCAGGAGAAGGTAATGGTAACACGTTAAG GGCATGGCAACCAATCAAGCCTGACCTTACCTGCTGCCATGGCTTGCTGC ACAGCCAGAGCGGTGCTAGCTGAGGAACGTGGCATGGAAGCAGCAAGAGC TGCAATGGCTAGTGGATTCATGACCCCTGCACGAGATGGGACTATGGAAG CCAGGCCAGCAGAGGACGCCTTATGAGGGGTCCGGCTGCGACTACGGCTG CTGCTGCTGCTGCTGCTGCTGTAGCTGCGTGTTCTGCGGGGCAGAAGAGG CTGATCAGGCAATCTTCACAGGCCCTTTCCTCTGCCAGCGGGGGTTGGGT CAGTCAAGCTACCTCCTGCTGCTCTTCCTGCGCCGAGATGATCCCCTGTA GCTATCACGGCTGCCATCACTGTCATACCGGTCTCGGCCTCGCCTATGAC GGCTTCTGCGCCTACTGTTGTGGGGTAGTGGTGGTGGTGGTGGTGGTGGT GAGATGAAAGCGAGCAACTGGGTCAATGGTGAAGGCAGAACTAACCTGTC ACTTCTGCTACGGCTCTTGCGGTGCTTCCGGCTCCTTGAAATTGCGGTAC AGCTCAGGTCAGAGCAGATTGCCCACCCTTGGTCTTTCCCCTACTCACCT GTGCCTGTCCGCGTCCCTGGATCTTCTGTCCCTAGACCTTGAGTGCCTGC GGCGGTGCCGGCTATGACTGCGGCTCTCATCCCTGCGACTGCGTCTGGCA GATGGATGGTATTCAGTGCCTTGGACACAGAGTCGAGCTGTGCGTGCCTT GCATGGTAGCGCTCACCTCCTATCCCTGTCTCGGTGCCTGTCCTTGTCTC TGTCCTTGTCCCGATGCCTGTCCCTTTCCTTCCCTTTATCTCTGTCCCTG TCCCTGTCCCTACCCTTACCCTTGCTCTTCTCTTTCTCCCTCTTCTTACC CTTTTCCTTCTCCCCCCCCTTCTCTAGATCTTCCTCCTTCCTAGCCTCCT CCTTTGCTTCTCCCTTATCCCCATTTTGCTTCTCCTTCTCCTCATCCGAT CCCATGATGGCAACCAAGTGCCTTTCCCCCTTTGCTACGGCCTCCTTACG TATACCTCTTTACCTCTTACAGACTCGTATCAGTTTCAGTTTTCGTTAGG TTTTAGGCCTTAAAGGCTTGAAGGCTTGAGACTTGAGGCGCGGGCAATCC CACCTCCTTGGCAAGACGATAAGTCGAGCCATGGGAATAGCCCCAAGGCG GAGGAGCTTCTTCACCTTGGCTTTGGCTGCGCCGCTGTGGAGCACTGCAG CACTGGCCCCCCCCTCAAACCTCACCGGCTTCAACCTCAAGGGGTGGGTT ACTAGCACACACCTCTTCTACTGCTTGTAGCTCCAATGTGCCTCACCAAC CTATCTTCGCTAGGTCAACCTTAGCTCCCAATGCGTGGACAACGAGGGGA AGAAGATCCTACATGGAGATGATGAGTGAAGAGTAAGACTGTGCATTCTC TGACTTCTTGCTCTTACCAATTATAGCTCATCGAGCTAGCTCTATGCTGT TTAGAGACAACTCCAGATGTCTCAGCTGCTTGACCCCATCATGCCCTTTC ATCAGATATGCCGGTGATGGCGAGGGCAGAGCACCAAGTGGTGGTGGCAG TGGCGACAAAAGACTCCCAAGGTACTTGATAGCGACGTCAGAATCGGGGT TGTAGGGGTTGGCAGGATGGAGAGAGCTCAAGGTGTCACACATTCTTCAG AGCAAATGAAGTACCAAGATTGGGCTGCAACCCCACTGCCCTTTTGACCC TGCCATTTCTCAGGATGGTTAGCTGGGGTCTCAACTCACGGAGTCCCCCT AGCACCCGCAAGGCATTAGGAAGCAAGAGCAAGACACACATCACGGTAAA TGAGTAGTATCAGTATACATGGCTGGGTAGCAACCCTCCAAAAGACCAGA GGCAGTTGAAGTGAGGAGGAAGAGAAAGCTCTTTGTACGAATGGTTAGAG AGAGCGCATGGTCCCAAAACGTTCATGCCCATGCCTAGATCTTGATTCCA GCTCAAATCACTCAAATCACTCCAATCACTCAGGTATATGTCTGTGAGGT GTGCGGGTCAGAGCACGTGCAGTGGGTTGGACGGTGCCCCACCTGCAAAG AGTGGAACAGTGTAAAACCGTTCAAGGTCCCGAGGGAAGGAGGTAGATGA AAAGGAGATGCCCGTTCTTGAGAGAGAAGAGAGAGAGCATACCTTTCTTG ACTGTGCTCTCACGCATCTGCTGCAAATCAGGGTCAGGCCTGCGCCAGAG CAGCAGAGCTGGGCTAAGGAGTGGTGAAGGCACCAAACCTGCTGCTAGGT CTATTGGTCACTCCCTTATTTGTTGGTCACCTTACCCCTGGCCTTGACCT TAATTACGTAGCCCCCTAACCCTTACCATGACCTCAACCTTGTACTAAAA AGAAGTGCTTGCCTTGCAGATGCACTGCGCTCACCACGGCATGCTCGCTC TCATACATGACGCCCTCTGTCCCATCATCTGAGGGTTGCCCCTTCTCATC CGCAGTATGTGCTCTCCCTCATCTCACCCACAACGCAGGAGCCTGGACCC CAGGGCAGTGACATCCGCCCCCAGTGGTTCTTTTGAGCACGATAGCTGGG TGCCTGATGGGGTAGCCGGCCAAGGGCTGGTACAGAGGATAACTGACGTG GAGGCAGATGAAATGCTGCAGCGAATTGAGCTACCTGTAAGTGCCAGGTG ATGGTGCAAGGTAGTGGATGTGGGGGAGCAATGTGGAGGGGCTCTCACTC GCTGGAAGATTCCAGAAGAAGTTAATGCAGGGGGTGTGTGGGCAAGCACT CAGCTTGTAGTGATTTTACATTGACCTGGCTTGTGGCACTTGGGGACCTA CTAGGCCAGCTACCTGACCTGTTCTGGCATAACCCAACGTGTACCAGCTC TAGTGCTGGAGCACCTTCACCTTCTTGCAAGCTTTGTAACCTTGGCTGTC ATAACCTTCTCCATGCCTTTAGGGTACAGAACTCTCTCGCGTATTAGGTG GAGGACTGGTGCCAGGCAGTGTAGCAATGGTGAGTCAATTAGCAATTAGC AACTAGCACAGCACTCTGCCCTTCAGTGATTTGCACTTGAAGGTTTGCTT TGTTTTTGCTGGGCAAAACTGTGGTAACCCACCTCCACTCTTCTAACAGA TTGGTGGTGATCCAGGTGTAGGGAAGTCAACTCTCATGCTGCAGCTGGCA GGGAAGTTAGCTGGGACCACAACAGGTAGGTTAGGTTGGTTACCTTGGTT ACCTTGCACTTGCACCACCACACCCTTTGATATGCCTTGAACACCTAGCC GATAGAGCAATGTAACAGCTTCTCCTTCAGAGCTCCTTCCTCCTGTTCAT TCATGAGCCTAGCACGTCTTTTTGGTAGTTACGTAGCAGTGCATCATCAC CATGACATCCAGCGCGTACTGAAAGAGTCCTATATGTGTATGCAACCCTT GCCCTAATACCCCTGAACCCTGCTGTAACTGGCAGGGCACCACTCAGGTG CTCCCACGCGTCACACTCAGTCGCTCTTACACATCTTGCCTTGCTCTCAG GTGCTGGACTTGGTCCTATTGTCTATGTGTCCGGAGAGGTAACTAACCTG AGCAGGCCAGGCCACCGATAGATAGCTCTGCTTTATCTTTTCCTACTGTT TTATGATGATGTTTCTTTTTTTTGCTTATGATTTGGCAGGAAAGCGCGGC ACAGGTTGCATCTCGGGCCCGGAGATTTAGCATAGCCGAGCCACAGCTTT ACCTCATGTCAGAAACTGACATTGATCTCATTACTGACCAGGTACCAAAA CTAGAAAAAAAATTGAGAGGGGGGAAGAAAAGTCTTCTGGCGCTCTACTT CTTACCAGTATCAGCCGCTTGTCACCGAGCTAGTGGATCTGTCATCATTT ATCAGGAGCTCACATTTATCCATTGTTTGGGCCTGGTACCTGACCCATTT TGAGCCTGGCTACTGCTTAGTGTTGACCACCTTCTGCCTCTCCCACCTTG CACTCATAGCTTGCTGCTATGCGGCCTCTCCCAGCGCTGGTCATTGTAGA CTCCATACAGACGCTGTGCTCCGCGGACATAGCCTCTGGTCCAGGCAGCA TTTCACAGGTTAGAGCAAAGCACAACAGCTTTGTCGACATTACTTGCGCA GTGTTGCAACTGGGGAGCTGGCAGTCATACCAGCAACTTGATGGACCCCT GCCTCTTTTGCTTGGCTGACTTCCCTCAATTCCATTGAACCAGGTGAAGG AATGCTCTGGCCGGCTGGTCCATATAGCCAAAGGCCTTGGTGTAGCTGTC TTCCTGGTGAGTGTTAGTGCATCTGCCACTGTAGTCTTCAGTCTGGAGCT TCATCCCGCAAAGTTCTTGGCATTAATGGCCCTGATGGACCAAACCCGCT GGTGAAATATGGCTAGGTTGGCCATGTCACGAAATCTGGTGACATTGCAG GGCCTCGGACAGTCGAGCACATGGTTGATGCGGTGCTGTACCTGGAAGGA GACAGCTTAAACTCATACAGGCTCTTGAGGTGAGCGCTGCACCCAAAGTA TTTGTGTTAGGGTGAGAGGGAGGAAGGGGGAGAGCGCCATGGAGTTTAAG AGGTTACTTGCCCTTTTGCTCTTTGAGCCCATTCATGGATGAGTGAGTAT ATCCGTGGGTGGAATGCTCTTGGGGAGTTCAATGAATGAACGTATTCATG CCAACCCCTTTGTCTAGGAGTGTCAAGAACAGGTTTGGGGCGAGCAATGA AATTGGAGTGTTTGAGATGCACGAAGGTATGCCTCTCAACCAAGCCTTCT CCCAGTAACAGGTCACTGGTGGCAGGGGCAGTGGCAGCTAGCCGCTGGTG GTGCTTGTCACTGTATGTGTCACTGTCACTCTATGTCGGCATAACCATTA CTCTTGCACCGTACTGTTTCAACTGTTTCAACATGAAAAAGGCGGCCTCA AGGAGGTAGTCAATCCCTCTGAGCTGTTCCTCTCAACCGCTTCACCCGCA GATGCCGCGGAAGAGGTGAGTGAGTGAGTGAGTGAGTGAGGAAATGAGTG AGTGAGAGAGGAGTGGGGTGTGGGGTTGTGATCGCCAGTCATCAGGAGCT ACTCAGACCGTGCCAATTAGCTCTTGGCTCCGGACTGAAAGACAAGTCAT TGCGGCTGTGCTGTGGGTGGTCACCCTCATGGTTTGAGGCCTTGCCGATG CTGTTCCCACGGCCCTGAAAAGCTCAACACCCAACAGGGTACTAACCTTG ATGGCACTGCTGTCATGGTGACAATGGAAGGCTCCAGACCGCTGCTATGC GAGTTGCAAGCACTGGTAAGGTGTTGTGGATCACAGCATAGATCTCAGCA ACCTAGAGATATCAGCCAACGCTTGCTTCTCACCCACTGACACCTACCTG CTATCAGGTCACTTTTAGTAAGCTGCCGTCACCTAGGCGAACCTCAGGTG GGTGAGGCGCCCCTATCAATTAATCTTTACACAAATCTTGACTTCTTTTT TCTTCTCTTCTCTTCTTCATGCCCTTCTCACTGACTGCAGACGGCATCCA CTTGCCTCGACTGCTCCTGCTCTTGGCGGTGCTGCAGAAGCGGCTAGGGT ACAACATGTCATCCCGTGAGGTATTCATTTCCATGAATGTTAACGCTGCT GGGCAGTAGACACCTTAACCTGCTCGATCCCTTTGATTGGGGCGGTTAGG CAGACCAGCTCAATTGTTTGTGACTGTTTGTGACTATTTGTGACTGTTTG TGACTGTTTGCGACTGTTTGCGACTGTTTTGACTGTCTTGGGCGGTCAGC CTCAGCCTCAGCCTCAGCCTCAGCCCTGTTGCAGATTGGAGACACAGCTG ACCATGAACTGCGCTCACCTTTGTCTGCCTTCCAATACCCCATCAACTAC CCTGCGAGCTCATCCTGCTCAGCAACGCAACCTACAAAGGTGGTGAATGG TTCTACTTTCTCCCTCAGCCTCACTGTTACTTACATACCACAGGTGTACC TGAATGTCGTTGGGGGGCTGCGGTTGCATGAAGCAGCGTCTGACTTAGCA GTGGCTCTGGTCATTGTGAGCAGCTATACCGGCATCCCGGTGCACAGGTA TGTGGTGCTTTTTATGCTTTCAGCCAGAAGCCCCCTGCAGACTGTAGTGC TGCGTTGACGTGGAGGCAACCCCTTCAAGATCTATCCCAAGCAGCTTGGT AATTGCGGTGGTGCATCAAGCACGGCCCCTGCTTCCTAGCAACATGGCTG CTTTGCTGATCCTATACCTTCCTCCTTCCCTGCACTGCAATGTACTGCAC TGTACCAATGAACTGCACTGTTGCTGCGGGGGCTACCATCTCATCCACCT CTTCTCCCTCATAGAGACACCTGCTTCATTGGCGAGGTAGGTCTTGGAGG GGAGGTCCGAATGGTGCAGCAGCTTGAAAGAAGACTCCAGGTGAGTAACC AAGAGGTTTTGTGACTTCACCTGCCTTGCCGAATGCTGAAAGGAAAAAAG AAATTCTATTAAGCTCTCCTGTGTTGTGACCTTTTAGCTTTCAGCTCCTA TTTCTCCCAGACTAGGTCACTCTCTCTCGTCGCTCACCTCCTTGCCTATA TCTGCAGGAGGCAGCCAAGTTTGGTTATGCCAGGGTAGTGACCCCAAAGC TGCCCAAGGGATCTAAGGCCAAGCTCCCTTCTGGCATAGAGGTGGTCCAA TGCCGGTAAGACAGAAAAATGCACCACTCTCCGCTCTTTTATTTCAGACA TATTAAGCTGTCTTCATGAGAGTAGAACACCCCAATCATCAGCACAACAA TATTTAGTTTCGTCCATTTACGCTTTCTACAAAAGTTTATCAGCCAGACT CTCAATTCCCATCTGGTCCCTCCCCTCCCCTCTCCTCTTCAGATCTCTTA AGCATGCTATCGATGTGGGCCTCACTAGAAGGGCATACCCGCACAAATAC GACCCAAAGAAGAAGGGTCGTAGACAGGGTCAGGATCAGTATCAGGATGA CAGGGCATCTAACCAAGAGGAAACCGAGGAGGCAGAAGATGATGAAGGCT GGGGAGACGGGTGGGGTGATGCTGCGTGACTAGCCCCAACTGATAACAGA GGGGGCCTCATGCCATGCCGCCATGGCAGGGCCACCCCCACCCATCAGCC TGCTCTGAGTCAGAGCCAAAGCCAAAGCCAAACATGCAGATGTTGATTTG CTGGACTAGAGCTGAGACAGCGTCTTGAGTTCTTTTCTCAAGCGGCCCAG AATTTCCTGCCATAGAGGTGTAGAGGTGTAGAGTTGTCAGGCCAATGTAG TCGCAAAGAGTGGCTGCAGAGTATCTTTAGGGAGAACCTGGCCATGCATG TTGGTAAAATTAAGCACCAGC
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Coding sequence (CDS) from alignment at C-australica_Contig_1043:1244..9014-

>mRNA_C-australica_Contig_1043.2.1 ID=mRNA_C-australica_Contig_1043.2.1|Name=mRNA_C-australica_Contig_1043.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1998bp|location=Sequence derived from alignment at C-australica_Contig_1043:1244..9014- (Chrysoparadoxa australica CS_1217)
ATGGGAATAGCCCCAAGGCGGAGGAGCTTCTTCACCTTGGCTTTGGCTGC
GCCGCTGTGGAGCACTGCAGCACTGGCCCCCCCCTCAAACCTCACCGGCT
TCAACCTCAAGGGGTCAACCTTAGCTCCCAATGCGTGGACAACGAGGGGA
AGAAGATCCTACATGGAGATGATGAGTGAAGAATATGCCGGTGATGGCGA
GGGCAGAGCACCAAGTGGTGGTGGCAGTGGCGACAAAAGACTCCCAAGGA
TGGTTAGCTGGGGTCTCAACTCACGGAGTCCCCCTAGCACCCGCAAGGCA
TTAGGAAGCAAGAGCAAGACACACATCACGGTATATGTCTGTGAGGTGTG
CGGGTCAGAGCACGTGCAGTGGGTTGGACGGTGCCCCACCTGCAAAGAGT
GGAACAGTGTAAAACCGTTCAAGGTCCCGAGGGAAGGAGGGTCAGGCCTG
CGCCAGAGCAGCAGAGCTGGGCTAAGGAGTGGTGAAGGCACCAAACCTGC
TGCTAGGAGCCTGGACCCCAGGGCAGTGACATCCGCCCCCAGTGGTTCTT
TTGAGCACGATAGCTGGGTGCCTGATGGGGTAGCCGGCCAAGGGCTGGTA
CAGAGGATAACTGACGTGGAGGCAGATGAAATGCTGCAGCGAATTGAGCT
ACCTGGTACAGAACTCTCTCGCGTATTAGGTGGAGGACTGGTGCCAGGCA
GTGTAGCAATGATTGGTGGTGATCCAGGTGTAGGGAAGTCAACTCTCATG
CTGCAGCTGGCAGGGAAGTTAGCTGGGACCACAACAGGTGCTGGACTTGG
TCCTATTGTCTATGTGTCCGGAGAGGAAAGCGCGGCACAGGTTGCATCTC
GGGCCCGGAGATTTAGCATAGCCGAGCCACAGCTTTACCTCATGTCAGAA
ACTGACATTGATCTCATTACTGACCAGCTTGCTGCTATGCGGCCTCTCCC
AGCGCTGGTCATTGTAGACTCCATACAGACGCTGTGCTCCGCGGACATAG
CCTCTGGTCCAGGCAGCATTTCACAGGTGAAGGAATGCTCTGGCCGGCTG
GTCCATATAGCCAAAGGCCTTGGTGTAGCTGTCTTCCTGGTTGGCCATGT
CACGAAATCTGGTGACATTGCAGGGCCTCGGACAGTCGAGCACATGGTTG
ATGCGGTGCTGTACCTGGAAGGAGACAGCTTAAACTCATACAGGCTCTTG
AGGAGTGTCAAGAACAGGTTTGGGGCGAGCAATGAAATTGGAGTGTTTGA
GATGCACGAAGGCGGCCTCAAGGAGGTAGTCAATCCCTCTGAGCTGTTCC
TCTCAACCGCTTCACCCGCAGATGCCGCGGAAGAGGGTACTAACCTTGAT
GGCACTGCTGTCATGGTGACAATGGAAGGCTCCAGACCGCTGCTATGCGA
GTTGCAAGCACTGGTCACTTTTAGTAAGCTGCCGTCACCTAGGCGAACCT
CAGACGGCATCCACTTGCCTCGACTGCTCCTGCTCTTGGCGGTGCTGCAG
AAGCGGCTAGGGTACAACATGTCATCCCGTGAGGTGTACCTGAATGTCGT
TGGGGGGCTGCGGTTGCATGAAGCAGCGTCTGACTTAGCAGTGGCTCTGG
TCATTGTGAGCAGCTATACCGGCATCCCGGTGCACAGAGACACCTGCTTC
ATTGGCGAGGTAGGTCTTGGAGGGGAGGTCCGAATGGTGCAGCAGCTTGA
AAGAAGACTCCAGGAGGCAGCCAAGTTTGGTTATGCCAGGGTAGTGACCC
CAAAGCTGCCCAAGGGATCTAAGGCCAAGCTCCCTTCTGGCATAGAGGTG
GTCCAATGCCGATCTCTTAAGCATGCTATCGATGTGGGCCTCACTAGAAG
GGCATACCCGCACAAATACGACCCAAAGAAGAAGGGTCGTAGACAGGGTC
AGGATCAGTATCAGGATGACAGGGCATCTAACCAAGAGGAAACCGAGGAG
GCAGAAGATGATGAAGGCTGGGGAGACGGGTGGGGTGATGCTGCGTGA
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