mRNA_C-australica_Contig_10419.1.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_10419.1.1 vs. uniprot
Match: UPI001C5EA83A (ParB N-terminal domain-containing protein n=1 Tax=Roseobacter sp. YSTF-M11 TaxID=2859783 RepID=UPI001C5EA83A) HSP 1 Score: 267 bits (683), Expect = 4.940e-86 Identity = 145/246 (58.94%), Postives = 178/246 (72.36%), Query Frame = 1
Query: 16 IDLTGFKRADLRDQPQPMLLWAQIDQLVIDRRYQRGLTGKGRSAIQKMADGWDWRKFQPILVAPTDAGKLAVVDGQHRAHAAALCGLEANPAMTVAMTLQEQASGFAAVNRDRVGVSLNQVYRAELASGAEWALAARDAVEAAGCKLAGYNASSLTRKPGIIYGVGLIRRMVTNGEAAAVTAGLQAVRESDQRNDVESYTGAVLTPWLAALARNQRFLKLDLSSHFDAFDIPSMMDAARIKARQTG 753
IDL GF+ A LRDQPQP L I +L ID YQR +T GR A+Q++AD +DW KFQPILVAPT+ GK A+VDGQHRA AAAL GL A PAM V MTL +QA GFAAVNRDR+ + +YRAELA+G++WA+ + AVEA C+LA NASS ++KPG I+ +GLIR+MV GEA AV+ GLQAVR S D YTG VL+ WL A+ARNQR+L+L LS FDA DI ++D AR ++R G
Sbjct: 7 IDLKGFRPATLRDQPQPSLKMVAIAELGIDTLYQRQMTATGRRAVQRIADEFDWTKFQPILVAPTELGKFAIVDGQHRASAAALVGLTAIPAMVVPMTLAQQALGFAAVNRDRIKIDGLGIYRAELAAGSQWAIDCQAAVEAGACQLATSNASSKSKKPGAIFAIGLIRKMVACGEAEAVSLGLQAVRRSICGTDPYYYTGPVLSVWLGAIARNQRYLRLHLSRVFDAIDIGFILDDARSRSRVLG 252
BLAST of mRNA_C-australica_Contig_10419.1.1 vs. uniprot
Match: UPI0012550021 (ParB/Srx family N-terminal domain-containing protein n=1 Tax=Oceanicella actignis TaxID=1189325 RepID=UPI0012550021) HSP 1 Score: 258 bits (660), Expect = 1.320e-82 Identity = 142/274 (51.82%), Postives = 180/274 (65.69%), Query Frame = 1
Query: 1 MTTDRIDLTGFKRADLRDQPQPMLLWAQIDQLVIDRRYQRGLTGKGRSAIQKMADGWDWRKFQPILVAPTDAGKLAVVDGQHRAHAAALCGLEANPAMTVAMTLQEQASGFAAVNRDRVGVSLNQVYRAELASGAEWALAARDAVEAAGCKLAGYNASSLTRKPGIIYGVGLIRRMVTNGEAAAVTAGLQAVRESDQRNDVESYTGA--------VLTPWLAALARNQRFLKLDLSSHFDAFDIPSMMDAARIKARQTGGGARTFVTDEIAETL 798
MT ID TGF A LRDQ QP L+WA++ LVID RYQR +T GR AIQK+AD WDWR +QPI+VAP+D G++AVVDGQHRAHAAA+CG+EA PAM + MT +EQA F +N +R + VYRA LA+G A+A RDAVEA GC L Y S RK G I+ +G+I RMVTNGEA+AVTAGL+A+ S+ G VLT WLAA+A NQ+FL +DL+S FD D ++D +R ++R G AR + + + L
Sbjct: 1 MTFREIDTTGFHPAQLRDQMQPSLIWAKVADLVIDDRYQRQITTAGRRAIQKIADNWDWRLYQPIIVAPSDGGRVAVVDGQHRAHAAAVCGIEALPAMMIPMTPREQAKAFHGLNTERTRLHTTAVYRARLAAGDPAAIAMRDAVEAGGCTLMTYVPSYKDRKGGQIFAIGMIERMVTNGEASAVTAGLRAMIASEAAGQEPDNYGTHLRIWDAPVLTVWLAAIASNQQFLSIDLTSVFDEIDWFDLLDRSRARSRLQGKPARQIAIEGVKDRL 274
BLAST of mRNA_C-australica_Contig_10419.1.1 vs. uniprot
Match: A0A3M1A8A5_9PROT (ParB domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1A8A5_9PROT) HSP 1 Score: 257 bits (656), Expect = 4.820e-82 Identity = 140/272 (51.47%), Postives = 181/272 (66.54%), Query Frame = 1
Query: 1 MTTDRIDLTGFKRADLRDQPQPMLLWAQIDQLVIDRRYQRGLTGKGRSAIQKMADGWDWRKFQPILVAPTDAGKLAVVDGQHRAHAAALCGLEANPAMTVAMTLQEQASGFAAVNRDRVGVSLNQVYRAELASGAEWALAARDAVEAAGCKLAGYNASSLTRKPGIIYGVGLIRRMVTNGEAAAVTAGLQAVRES----DQRNDVES--YTGAVLTPWLAALARNQRFLKLDLSSHFDAFDIPSMMDAARIKARQTGGGARTFVTDEIAETL 798
MT ID++GFK A+LRDQ QP L WA++ LVID RYQR +T +GRS IQK+AD WDWR +QPI+VAP GKLAVVDGQHRAHAAA+CGLEA PAM V MT QEQA F +N RV + ++RA LA+G A+ RDAV AGC+L YNA++ ++KPG I+ + + RM+ GE AV AGL+ +R S DQ D + Y GA+++ WL A+A NQ+FL+ DL+ FD D ++MD R +R TG AR ++E L
Sbjct: 1 MTFREIDISGFKPAELRDQMQPTLTWAKLADLVIDDRYQRQITNRGRSMIQKIADDWDWRLYQPIIVAPGAGGKLAVVDGQHRAHAAAICGLEALPAMIVPMTPQEQARAFHGLNTRRVKLQPTAIFRARLAAGDPVAVEMRDAVAEAGCELMTYNATAASKKPGQIFAIRTVERMILAGEREAVVAGLRGMRTSETGSDQAGDYGAALYDGAIISVWLTAVAANQQFLRCDLARVFDTIDWFTLMDECRATSRATGQPARHIAITRVSEAL 272
BLAST of mRNA_C-australica_Contig_10419.1.1 vs. uniprot
Match: A0A1G5HDY9_9RHOB (ParB-like nuclease domain-containing protein n=1 Tax=Paracoccus tibetensis TaxID=336292 RepID=A0A1G5HDY9_9RHOB) HSP 1 Score: 206 bits (523), Expect = 3.800e-62 Identity = 105/212 (49.53%), Postives = 146/212 (68.87%), Query Frame = 1
Query: 16 IDLTGFKRADLRDQPQPMLLWAQIDQLVIDRRYQRGLTGKGRSAIQKMADGWDWRKFQPILVAPTDAGKLAVVDGQHRAHAAALCGLEANPAMTVAMTLQEQASGFAAVNRDRVGVSLNQVYRAELASGAEWALAARDAVEAAGCKLAGYNASSLTRKPGIIYGVGLIRRMVTNGEAAAVTAGLQAVRESDQRNDVESYTGAVLTPWLAALA 651
IDL G + A L QP P L+W +I LVID RYQR L + AI K+A + W +F P+LVAP + G+ A++DGQHRAHAAALCG+E PAM + +EQA+ F VN ++ VS +Q++RA L +G +WA+ R+AVEAAGC+L G NA++ +++PG IY +GLIRRM+ + AVT GL A+R+ D + +Y+ A+LTPWL A+A
Sbjct: 7 IDLAGMQPAQLASQPAPQLMWIEIKDLVIDDRYQRLLAEGNKRAISKIAADFRWSRFSPVLVAPIEGGRYALIDGQHRAHAAALCGIERVPAMVALVAPEEQAAAFIDVNTRQIRVSPHQIFRAALLAGEDWAVRCREAVEAAGCRLMGSNANTASKRPGQIYAIGLIRRMIEAHQEKAVTVGLTAMRKYDA-GAIPNYSDALLTPWLGAVA 217
BLAST of mRNA_C-australica_Contig_10419.1.1 vs. uniprot
Match: A0A0U2C144_9CAUD (Partitioning protein-like protein n=1 Tax=Paracoccus phage Shpa TaxID=1647282 RepID=A0A0U2C144_9CAUD) HSP 1 Score: 197 bits (501), Expect = 7.580e-59 Identity = 100/213 (46.95%), Postives = 142/213 (66.67%), Query Frame = 1
Query: 13 RIDLTGFKRADLRDQPQPMLLWAQIDQLVIDRRYQRGLTGKGRSAIQKMADGWDWRKFQPILVAPTDAGKLAVVDGQHRAHAAALCGLEANPAMTVAMTLQEQASGFAAVNRDRVGVSLNQVYRAELASGAEWALAARDAVEAAGCKLAGYNASSLTRKPGIIYGVGLIRRMVTNGEAAAVTAGLQAVRESDQRNDVESYTGAVLTPWLAALA 651
RID+ G R DL QP P ++W +IDQL+ID RYQR L R+AI+++A + W +F P++VAP + G A++DGQHRAHAAAL G+ + PAM + +EQA F +N + V+ +Q+YRA L +G WAL RDAV AAGC+L S ++KPG ++ + IR M+ G+AAAVTAGL+A+RE + + V +++ +LTPWL A A
Sbjct: 7 RIDIEGMTRFDLASQPAPQIMWVEIDQLLIDDRYQRPLNAGNRAAIRRIAADFRWSRFTPVIVAPAEGGGYALIDGQHRAHAAALVGIRSIPAMVALVAPEEQAQAFIDINTRSIRVTPHQIYRAALTAGEPWALTCRDAVAAAGCRLMTSKYSQNSKKPGQVFAISTIRAMIDAGQAAAVTAGLRALREYEP-DSVANFSDVLLTPWLRAAA 218
BLAST of mRNA_C-australica_Contig_10419.1.1 vs. uniprot
Match: UPI0018918B49 (ParB N-terminal domain-containing protein n=1 Tax=Paracoccus sp. NBH48 TaxID=2596918 RepID=UPI0018918B49) HSP 1 Score: 192 bits (488), Expect = 7.910e-57 Identity = 98/212 (46.23%), Postives = 143/212 (67.45%), Query Frame = 1
Query: 16 IDLTGFKRADLRDQPQPMLLWAQIDQLVIDRRYQRGLTGKGRSAIQKMADGWDWRKFQPILVAPTDAGKLAVVDGQHRAHAAALCGLEANPAMTVAMTLQEQASGFAAVNRDRVGVSLNQVYRAELASGAEWALAARDAVEAAGCKLAGYNASSLTRKPGIIYGVGLIRRMVTNGEAAAVTAGLQAVRESDQRNDVESYTGAVLTPWLAALA 651
ID++ + A L QP P +LW +++QLVID RYQR + R AI+++A G+ W +F P++VAP + G+ A++DGQHRAHAAALCG+++ PAM + +EQA F +N ++ V QVYRA L + WA+A R+AVEAAGC+L S+ +KPG ++ V LIRRMV G+A AVT GL+++ E D + +++ A+L PWL A+A
Sbjct: 10 IDISTMQPAVLAPQPAPQMLWVELEQLVIDDRYQRPINDGNRRAIKRIASGFRWSRFSPVIVAPIEGGRYALIDGQHRAHAAALCGIKSIPAMVALVAPEEQAQAFIDINTRQIRVGSEQVYRAALTANEPWAIACRNAVEAAGCRLMTSKYSTAAKKPGQVFCVDLIRRMVEAGKADAVTIGLKSMLEYDP-SATANFSNAMLVPWLGAVA 220
BLAST of mRNA_C-australica_Contig_10419.1.1 vs. uniprot
Match: A0A562NS79_9RHOB (ParB-like nuclease family protein n=1 Tax=Paracoccus sulfuroxidans TaxID=384678 RepID=A0A562NS79_9RHOB) HSP 1 Score: 191 bits (484), Expect = 2.980e-56 Identity = 94/214 (43.93%), Postives = 140/214 (65.42%), Query Frame = 1
Query: 16 IDLTGFKRADLRDQPQPMLLWAQIDQLVIDRRYQRGLTGKGRSAIQKMADGWDWRKFQPILVAPTDAGKLAVVDGQHRAHAAALCGLEANPAMTVAMTLQEQASGFAAVNRDRVGVSLNQVYRAELASGAEWALAARDAVEAAGCKLAGYNASSLTRKPGIIYGVGLIRRMVTNGEAAAVTAGLQAVRESDQRNDVESYTGAVLTPWLAALARN 657
+D++ + R QP P L+W +D LVID RYQR L + AI+++A+ + W +F P+LVAP G+ A++DGQHRAHAAALCG ++ PAM + +EQA F +N ++ V QVYRA LA+G WA+A RD VEAAGC+L S+ ++PG+++ V LI+R+V G+ AVT L A+ E D + V +++ +LTPW++A+A +
Sbjct: 7 VDISDLPACEPRPQPAPQLMWIAVDHLVIDERYQRPLAAGNKLAIRRIAEEFQWSRFSPVLVAPVAGGRYALIDGQHRAHAAALCGFDSIPAMVTLVAPEEQALAFIEINTRQIRVGREQVYRAALAAGESWAIACRDVVEAAGCRLMTSKYSTSQKRPGMVFAVALIQRLVAAGKGEAVTRALAALMEYDA-SSVPNFSNDLLTPWISAVAES 219
BLAST of mRNA_C-australica_Contig_10419.1.1 vs. uniprot
Match: A0A844HNH5_9RHOB (ParB domain-containing protein n=2 Tax=Paracoccus litorisediminis TaxID=2006130 RepID=A0A844HNH5_9RHOB) HSP 1 Score: 191 bits (484), Expect = 3.250e-56 Identity = 103/217 (47.47%), Postives = 140/217 (64.52%), Query Frame = 1
Query: 16 IDLTGFKRADLRDQPQPMLLWAQIDQLVIDRRYQRGLTGKGRSAIQKMADGWDWRKFQPILVAPTDAGKLAVVDGQHRAHAAALCGLEANPAMTVAMTLQEQASGFAAVNRDRVGVSLNQVYRAELASGAEWALAARDAVEAAGCKL-AGYNASSLTRKPGIIYGVGLIRRMVTNGEAAAVTAGLQAVRESDQRNDVESYTGAVLTPWLAALARNQR 663
ID+ G + +L QP P L+W +I LVID RYQR L+ ++I+++A + W +F P+LVAP + G AV+DGQHRAHAAALCG+EA PAM + EQA F +N ++ VS + VYRA L +G EWA+A RDA+ AAGC+L N S ++ G ++ VGLIR ++ +G AVT GL A+ E D V ++T +LTPWLAA A N R
Sbjct: 12 IDVAGMEMLELTPQPAPQLMWVKIGDLVIDDRYQRPLSTNNWASIKRIAREFRWSRFSPVLVAPVEGGHYAVIDGQHRAHAAALCGIEAIPAMVALVAPDEQALAFIEINTRQIRVSGHVVYRAALTAGEEWAVACRDALSAAGCELMTRNNVSKNDKRAGQVFAVGLIRNLIQSGHHEAVTNGLAALMEYDPEA-VANFTDTLLTPWLAACAENSR 227
BLAST of mRNA_C-australica_Contig_10419.1.1 vs. uniprot
Match: UPI000413F713 (ParB/Srx family N-terminal domain-containing protein n=1 Tax=Leisingera caerulea TaxID=506591 RepID=UPI000413F713) HSP 1 Score: 186 bits (472), Expect = 1.950e-54 Identity = 102/237 (43.04%), Postives = 143/237 (60.34%), Query Frame = 1
Query: 52 DQPQPMLLWAQIDQLVIDRRYQRGLTGKGRSAIQKMADGWDWRKFQPILVAPTDAGKLAVVDGQHRAHAAALCGLEANPAMTVAMTLQEQASGFAAVNRDRVGVSLNQVYRAELASGAEWALAARDAVEAAGCKLAGYNASSLTRKPGIIYGVGLIRRMVTNGEAAAVTAGLQAVRESDQRNDVESYTGAVLTPWLAALARNQRFLKLDLSSHF---DAFDIPSMMDAARIKARQTG 753
+QP P L W ID L+ID RYQR L + I+K+A + W +F PILV+ G AVVDGQHR HAA +CG A P M V M QEQA F+ VN +S +++A LA+G +WA+ RDAV +GC+L N+S+ +K G IY + LIR++V G+ VTAGL+A+R D+ V Y+ +L PWL+ALA N+ FL+LDL D + + + +D R ++ + G
Sbjct: 16 EQPNPELAWVAIDSLLIDDRYQRPLGKSNWARIRKIASAFRWSRFSPILVSRAAGGGYAVVDGQHRVHAAKMCGYPAVPTMIVQMDYQEQARSFSWVNDQVTRISTFHIFKAALAAGDDWAVRCRDAVSESGCRLMTANSSTDNKKAGEIYAIALIRKLVEQGQGNVVTAGLKALRSYDETGRVPLYSAVILRPWLSALAANELFLELDLVQFLQEHDPYRVLNKLDQLRKESGKHG 252
BLAST of mRNA_C-australica_Contig_10419.1.1 vs. uniprot
Match: A0A0D6TGC5_9RHOB (ParB domain-containing protein n=1 Tax=Paracoccus sp. 228 TaxID=1192054 RepID=A0A0D6TGC5_9RHOB) HSP 1 Score: 185 bits (470), Expect = 3.670e-54 Identity = 98/212 (46.23%), Postives = 141/212 (66.51%), Query Frame = 1
Query: 16 IDLTGFKRADLRDQPQPMLLWAQIDQLVIDRRYQRGLTGKGRSAIQKMADGWDWRKFQPILVAPTDAGKLAVVDGQHRAHAAALCGLEANPAMTVAMTLQEQASGFAAVNRDRVGVSLNQVYRAELASGAEWALAARDAVEAAGCKLAGYNASSLTRKPGIIYGVGLIRRMVTNGEAAAVTAGLQAVRESDQRNDVESYTGAVLTPWLAALA 651
ID++ + A+L QP P +LW +I QLVID + QR L+ SAI+++A + W +F P++VAP + G+ A++DGQHRAHAAALCG+++ PAM + +EQA F +N ++ VS +QVYRA L + EWA+ AV AAGC+L N S+ ++PG + V LIR+ + G AAVTAGL AVRE D + V +++ A+LTP+L A A
Sbjct: 7 IDISNMQPAELASQPSPQMLWVEIAQLVIDDQNQRPLSKNNLSAIKRIASDFRWSRFSPVIVAPIEGGRYAIIDGQHRAHAAALCGIKSIPAMVALVAPEEQAQAFIDINTRQIRVSGHQVYRAALTADEEWAVECGKAVSAAGCELMTSNRSTADKRPGQVSCVALIRKTIEAGHGAAVTAGLTAVREFDPES-VANFSDALLTPFLGAAA 217 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10419.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10419.1.1 >prot_C-australica_Contig_10419.1.1 ID=prot_C-australica_Contig_10419.1.1|Name=mRNA_C-australica_Contig_10419.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=270bp MTTDRIDLTGFKRADLRDQPQPMLLWAQIDQLVIDRRYQRGLTGKGRSAIback to top mRNA from alignment at C-australica_Contig_10419:13..822+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10419.1.1 ID=mRNA_C-australica_Contig_10419.1.1|Name=mRNA_C-australica_Contig_10419.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=810bp|location=Sequence derived from alignment at C-australica_Contig_10419:13..822+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10419:13..822+ >mRNA_C-australica_Contig_10419.1.1 ID=mRNA_C-australica_Contig_10419.1.1|Name=mRNA_C-australica_Contig_10419.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=810bp|location=Sequence derived from alignment at C-australica_Contig_10419:13..822+ (Chrysoparadoxa australica CS_1217)back to top |