mRNA_C-australica_Contig_10406.1.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_10406.1.1 vs. uniprot
Match: A0A8J3KF09_9ACTN (Aminotransferase n=2 Tax=Catellatospora TaxID=53365 RepID=A0A8J3KF09_9ACTN) HSP 1 Score: 61.2 bits (147), Expect = 1.170e-8 Identity = 34/88 (38.64%), Postives = 48/88 (54.55%), Query Frame = 1
Query: 76 LAEASIEDADLGYQSPSGSELLRAAFLDAAERDGIALGTLGPQSVVTCSGGKQAMYLALHALV--RPGMRILLPQPGWVPYTLWVRSL 333
L A +D GY P+G LRA +LD +A G V+ GGK+A +LA+ L+ RP +L+PQPGW PY LW+ ++
Sbjct: 49 LGSAVARISDFGYADPAGDAGLRATYLDT-----LAEGRRDDLGVLVTGGGKEAAWLAIRYLLHQRPHGSVLVPQPGWEPYGLWLDAI 131
BLAST of mRNA_C-australica_Contig_10406.1.1 vs. uniprot
Match: A0A7C1HWL9_9EURY (Pyridoxal phosphate-dependent aminotransferase n=1 Tax=Methanoculleus sp. TaxID=90427 RepID=A0A7C1HWL9_9EURY) HSP 1 Score: 55.1 bits (131), Expect = 1.700e-6 Identity = 31/85 (36.47%), Postives = 49/85 (57.65%), Query Frame = 1
Query: 67 AHLLAEA--SIEDADLGYQSPSGSELLRAAFLDAAERD-GIALGTLGPQSVVTCSGGKQAMYLALHALVRPGMRILLPQPGWVPY 312
AH+ A +I D GY +G LR A ++ R+ G+ + GP+ V+ +GG + ++L + ALV PG R+L+P PG+V Y
Sbjct: 43 AHIKEAAVQAIRDGHTGYTPNAGIPELRNAIVEKFRRENGL---SFGPEQVLVTAGGSEGLHLVMEALVEPGDRVLVPDPGFVSY 124
BLAST of mRNA_C-australica_Contig_10406.1.1 vs. uniprot
Match: UPI00137B2C34 (pyridoxal phosphate-dependent aminotransferase n=1 Tax=Deinococcus alpinitundrae TaxID=468913 RepID=UPI00137B2C34) HSP 1 Score: 52.8 bits (125), Expect = 1.120e-5 Identity = 29/80 (36.25%), Postives = 44/80 (55.00%), Query Frame = 1
Query: 73 LLAEASIEDADLGYQSPSGSELLRAAFLDAAERDGIALGTLGPQSVVTCSGGKQAMYLALHALVRPGMRILLPQPGWVPY 312
+ A+A+++ Y + +G LR A +R+ T P +V SGGKQA++ AL AL+ PG +L+P P WV Y
Sbjct: 56 MAAKAALDAGKTRYTAVNGIPELREAIAAKLQRENAL--TYPPDAVTVTSGGKQALFNALFALLDPGDEVLIPSPYWVSY 133
BLAST of mRNA_C-australica_Contig_10406.1.1 vs. uniprot
Match: A0A523U5P6_9BACT (Aminotransferase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523U5P6_9BACT) HSP 1 Score: 52.8 bits (125), Expect = 1.120e-5 Identity = 36/107 (33.64%), Postives = 52/107 (48.60%), Query Frame = 1
Query: 4 ASSSSGGRGIDLCRGEVCLQLAHLL---AEASIEDADLGYQSPSGSELLRAAFLD-AAERDGIALGTLGPQSVVTCSGGKQAMYLALHALVRPGMRILLPQPGWVPY 312
A + G I GE H + AE +I Y +G +RAA + ++R G + + V+ C+G KQA++LAL A+V PG +LLP P WV Y
Sbjct: 25 AMKAEGKDVISFSAGEPDFPTPHYIKHAAEEAIAANQTRYTPQAGMPDVRAAVAEHVSKRTGYSHAL---EEVIICAGAKQAVFLALQAVVEPGDEVLLPTPAWVSY 128
BLAST of mRNA_C-australica_Contig_10406.1.1 vs. uniprot
Match: A0A101IRE3_9EURY (Aminotransferase n=3 Tax=Methanoculleus TaxID=45989 RepID=A0A101IRE3_9EURY) HSP 1 Score: 50.4 bits (119), Expect = 7.150e-5 Identity = 27/80 (33.75%), Postives = 44/80 (55.00%), Query Frame = 1
Query: 73 LLAEASIEDADLGYQSPSGSELLRAAFLDAAERDGIALGTLGPQSVVTCSGGKQAMYLALHALVRPGMRILLPQPGWVPY 312
+ A A+I + GY +G LR A R+ T P+ ++ +GG +A++L + ALV PG R+L+P PG++ Y
Sbjct: 47 MAAIAAIREGRTGYTPNAGIPELREAICGKFARENNL--TYLPEQILVTAGGSEALHLVMEALVNPGDRVLVPDPGFLSY 124
BLAST of mRNA_C-australica_Contig_10406.1.1 vs. uniprot
Match: A0A072NFE5_9DEIO (Aminotransferase n=3 Tax=Deinococcus TaxID=1298 RepID=A0A072NFE5_9DEIO) HSP 1 Score: 50.1 bits (118), Expect = 9.870e-5 Identity = 31/77 (40.26%), Postives = 40/77 (51.95%), Query Frame = 1
Query: 85 ASIEDADLGYQSPSG-SELLRAAFLDAAERDGIALGTLGPQSVVTCSGGKQAMYLALHALVRPGMRILLPQPGWVPY 312
A+IE Y SG EL A A +G+ P +V SGGKQA++ AL AL+ PG +L+P P WV Y
Sbjct: 58 AAIEAGHTRYTPVSGLPELREAVSAKFARENGL---EYPPDAVTVTSGGKQALFNALFALLDPGDEVLIPAPSWVSY 131 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10406.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10406.1.1 >prot_C-australica_Contig_10406.1.1 ID=prot_C-australica_Contig_10406.1.1|Name=mRNA_C-australica_Contig_10406.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=111bp VASSSSGGRGIDLCRGEVCLQLAHLLAEASIEDADLGYQSPSGSELLRAAback to top mRNA from alignment at C-australica_Contig_10406:4..336- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10406.1.1 ID=mRNA_C-australica_Contig_10406.1.1|Name=mRNA_C-australica_Contig_10406.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=333bp|location=Sequence derived from alignment at C-australica_Contig_10406:4..336- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10406:4..336- >mRNA_C-australica_Contig_10406.1.1 ID=mRNA_C-australica_Contig_10406.1.1|Name=mRNA_C-australica_Contig_10406.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=333bp|location=Sequence derived from alignment at C-australica_Contig_10406:4..336- (Chrysoparadoxa australica CS_1217)back to top |