mRNA_C-australica_Contig_10400.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10400.1.1
Unique NamemRNA_C-australica_Contig_10400.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10400.1.1 vs. uniprot
Match: A0A2D4SET3_9GAMM (Alpha/beta hydrolase n=1 Tax=Salinisphaeraceae bacterium TaxID=2026789 RepID=A0A2D4SET3_9GAMM)

HSP 1 Score: 253 bits (645), Expect = 6.590e-80
Identity = 127/272 (46.69%), Postives = 172/272 (63.24%), Query Frame = 1
Query:    4 VFLYIVSPQTAYQLALTLERGNAGLDVSEVSIGDVTLPVLEGGSGPPLLLIHGFGGDKDNWTRLAGELTDHFRVIAPDLPPFGEAPTDPDRGYGYAAQVDRIHQLVQAMDLSLVHVGGNSMGGAIAGAYAAAHPETVRSLWLLAPAAVADAPPSELDEHVAAGGKNPLLPATREQYFELMDWVFHEPPYIPAPVQWVLAQQAVAQRDRRSRVLEQIHADPLDLAAALDGVGVPTLITWGEHDRLLAVGGARILDQALPDSQLHLMPATGHVP 819
            V+LY ++P T  +L    +    G+  S+V +GD  +  + GG G PLL++HGFG D+ +W  +A  LTD F +IAPDLP FG+        Y    QVDR+    +A+ L   H+ GNSMGGAIAG +A  +PE V SLWLLAPA V  AP SE  + +  GG NPLLPA+ +Q+  ++DWVF EPPYIPAPVQ+ LA  A+ +R     + +QI+A+ L L   L G  VP+L+ WG+ DRLL V GA ILD AL +S++ ++   GHVP
Sbjct:   21 VYLYFMAPGTTARLLYEAQLRGLGMTESQVQVGDFNMTYIRGGQGEPLLMVHGFGADRTSWLAIAPYLTDRFEIIAPDLPGFGKTDHPMGADYRVTTQVDRLRDFARAIGLEKFHLAGNSMGGAIAGTFAGRYPEQVSSLWLLAPAFVQSAPMSEFGQRLTQGGPNPLLPASHDQFDAVVDWVFAEPPYIPAPVQYHLADTAIERRPLLQDIFDQINAEKLVLETKLKGSTVPSLVMWGDQDRLLHVAGAGILDDALANSRMVVLEGIGHVP 292          
BLAST of mRNA_C-australica_Contig_10400.1.1 vs. uniprot
Match: A0A5C7L973_9GAMM (Alpha/beta fold hydrolase n=1 Tax=Sinobacteraceae bacterium TaxID=1969813 RepID=A0A5C7L973_9GAMM)

HSP 1 Score: 249 bits (637), Expect = 7.560e-79
Identity = 126/272 (46.32%), Postives = 174/272 (63.97%), Query Frame = 1
Query:    4 VFLYIVSPQTAYQLALTLERGNAGLDVSEVSIGDVTLPVLEGGSGPPLLLIHGFGGDKDNWTRLAGELTDHFRVIAPDLPPFGEAPTDPDRGYGYAAQVDRIHQLVQAMDLSLVHVGGNSMGGAIAGAYAAAHPETVRSLWLLAPAAVADAPPSELDEHVAAGGKNPLLPATREQYFELMDWVFHEPPYIPAPVQWVLAQQAVAQRDRRSRVLEQIHADPLDLAAALDGVGVPTLITWGEHDRLLAVGGARILDQALPDSQLHLMPATGHVP 819
            V +Y  SP+    LA++ ER NAGL   E+++  + +  L+GG G PLLLIHGFG DKDN+TR+A  LT  +RV+ PDLP FGE+   PD  Y  A QV R+H  VQA+ L  VH+GGNSMGG I+  YAA +P    SLWLLAPA VA AP SEL + + AGG NPL+ A  +++  +  +V  +PP++P  +  V+ + A+A  D    + EQI + P  + A + G+ VPT I WGE DR L VGGA++L+  +P +   ++P  GH+P
Sbjct:   17 VAVYYFSPERLAHLAVSAERANAGLSRHEMAVNGIRVVYLDGGQGEPLLLIHGFGADKDNFTRVALYLTTRYRVLIPDLPGFGESGLAPDGDYSIATQVQRMHAFVQALGLKTVHIGGNSMGGEISAVYAAQYPTETGSLWLLAPAGVATAPKSELVQRLEAGGSNPLIAANADEFAAIFHFVMSDPPFVPRRILDVMGRTAIAHHDLNQHIFEQIRSAP-GIEAQVKGLTVPTRIVWGEQDRALNVGGAKVLEGLMPKASALILPGVGHLP 287          
BLAST of mRNA_C-australica_Contig_10400.1.1 vs. uniprot
Match: A0A2S8K548_9DELT (Alpha/beta hydrolase n=1 Tax=Desulfobacteraceae bacterium SEEP-SAG9 TaxID=2100161 RepID=A0A2S8K548_9DELT)

HSP 1 Score: 235 bits (599), Expect = 5.770e-73
Identity = 121/275 (44.00%), Postives = 175/275 (63.64%), Query Frame = 1
Query:    1 LVFLYIVSPQTAYQLALTLERGNAGLDVSEVSIGDVTLPVLEGGSGPPLLLIHGFGGDKDNWTRLAGELTDHFRVIAPDLPPFGEAPTDPDRGYGYAAQVDRIHQLVQAMDLSLVHVGGNSMGGAIAGAYAAAHPETVRSLWLLAPAAVADAPPSELDEHVAAGGKNPLLPATREQYFELMDWVFHEPPYIPAPVQWVLAQQAVAQRDRRSRVLEQIHA--DPLDLAAALDGVGVPTLITWGEHDRLLAVGGARILDQALPDSQLHLMPATGHVP 819
            LV +Y + P   + L  T+ER   GLD   + +  + +  LEGG G  LLL+HGFGG+KDNWTR    L+ HFRVIAPDLP FG++  DPD  Y  + QV+R+  LV+A+ +  +H+GG+SMGG IAGAYA+ +PE ++SL L+AP  VA + PSE+   + AG  NPL+  + E Y  L+D+VF + P+IP  ++    Q+A+  +   +++ +Q+ +  D   L   L GV V TLI WG  DR+L V GA+IL+  +P ++  LM A GH+P
Sbjct:   20 LVGVYFLFPGVTFDLLRTVERKAGGLDQHSIDVNGLRIEYLEGGKGDALLLLHGFGGNKDNWTRFGKHLSSHFRVIAPDLPGFGDSSADPDADYTISVQVERVKALVRALGIKSLHLGGSSMGGNIAGAYASKYPEELKSLLLIAPGGVASSEPSEMFRRLKAGEPNPLVAKSAEDYERLLDFVFVKRPFIPHAIKKHFIQEAIEHQPLNTKIFKQLLSSRDVPPLEVLLKGVPVATLIVWGMRDRVLHVSGAKILEAVIPKAKAELMDAVGHLP 294          
BLAST of mRNA_C-australica_Contig_10400.1.1 vs. uniprot
Match: A0A534SR54_9DELT (Alpha/beta hydrolase n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534SR54_9DELT)

HSP 1 Score: 234 bits (598), Expect = 2.180e-72
Identity = 123/273 (45.05%), Postives = 164/273 (60.07%), Query Frame = 1
Query:    1 LVFLYIVSPQTAYQLALTLERGNAGLDVSEVSIGDVTLPVLEGGSGPPLLLIHGFGGDKDNWTRLAGELTDHFRVIAPDLPPFGEAPTDPDRGYGYAAQVDRIHQLVQAMDLSLVHVGGNSMGGAIAGAYAAAHPETVRSLWLLAPAAVADAPPSELDEHVAAGGKNPLLPATREQYFELMDWVFHEPPYIPAPVQWVLAQQAVAQRDRRSRVLEQIHADPLDLAAALDGVGVPTLITWGEHDRLLAVGGARILDQALPDSQLHLMPATGHVP 819
            L  +Y + P     LA   E   AGL+   +    + +  L GG G  ++L+HGF  DK NW R+A  LT H RVIAPDLP FG++  DP+  Y  + QV+R+H   QA+ L   H+GGNSMGG IAGAYAA  P  V++LWLLAP  V  A PSEL E + A G+NPL     + +  L+D+VF E PYIP P+   LA+Q V  R    ++   ++ DPL L A + G+ VP LI WG  DRL+ V GA IL   +PD+++ +MP  GH+P
Sbjct:   54 LAAVYFLLPGVVLTLAQRAELRGAGLEQHGIDAAGLHIEYLSGGRGDAIVLLHGFSADKSNWVRVAKYLTPHLRVIAPDLPGFGDSTRDPNARYAISDQVERVHAFAQALRLDSFHLGGNSMGGTIAGAYAARFPHEVKTLWLLAPGGVRSAEPSELQE-LMARGENPLFIRDADGFERLLDFVFVERPYIPRPIARYLAEQGVRNRPFNEKISADLNGDPLALEATVKGLSVPALIVWGARDRLVHVSGAGILGSVMPDAKVVVMPNVGHIP 325          
BLAST of mRNA_C-australica_Contig_10400.1.1 vs. uniprot
Match: A0A5C7UE22_RHISP (Alpha/beta fold hydrolase n=1 Tax=Rhizobium sp. TaxID=391 RepID=A0A5C7UE22_RHISP)

HSP 1 Score: 229 bits (585), Expect = 3.480e-71
Identity = 117/270 (43.33%), Postives = 167/270 (61.85%), Query Frame = 1
Query:   10 LYIVSPQTAYQLALTLERGNAGLDVSEVSIGDVTLPVLEGGSGPPLLLIHGFGGDKDNWTRLAGELTDHFRVIAPDLPPFGEAPTDPDRGYGYAAQVDRIHQLVQAMDLSLVHVGGNSMGGAIAGAYAAAHPETVRSLWLLAPAAVADAPPSELDEHVAAGGKNPLLPATREQYFELMDWVFHEPPYIPAPVQWVLAQQAVAQRDRRSRVLEQIHADPLDLAAALDGVGVPTLITWGEHDRLLAVGGARILDQALPDSQLHLMPATGHVP 819
            LY   P+   Q A+  ER  A L   E  +    +  L+GG+G PL+L+HGFG DK+N+TR+A  LT H+RV+ PDLP FGE+    D  YG  AQV+R+H  VQ + L  VH+GG+SMGG IA  YAA +P+   S+WLLAPA V+ APPS L E ++ GG NPL+ +  +++  +  +V  +PP++P  +  V+ + AVA  D  S++  Q+      L   + G+ VP  I WGE DR L VGGARIL   +P++ + ++P  GH+P
Sbjct:    3 LYYTVPEKLAQYAVDGERAVARLTRHETDVAGFHIVYLDGGTGEPLVLLHGFGADKENFTRVAKFLTPHYRVVIPDLPGFGESSKPADADYGIDAQVERVHAFVQQLGLKKVHLGGSSMGGNIAAVYAAKYPDETGSIWLLAPAGVSTAPPSVLTERMSQGGSNPLIASNADEFAAVFHFVMEDPPFVPRRILDVMGRTAVANHDLNSKIFRQVRGSA-PLEPQVKGLQVPARIVWGEKDRALNVGGARILAGLMPNASVLILPGVGHLP 271          
BLAST of mRNA_C-australica_Contig_10400.1.1 vs. uniprot
Match: A0A534YUQ7_9DELT (Alpha/beta hydrolase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534YUQ7_9DELT)

HSP 1 Score: 228 bits (581), Expect = 6.430e-71
Identity = 115/233 (49.36%), Postives = 151/233 (64.81%), Query Frame = 1
Query:  121 LEGGSGPPLLLIHGFGGDKDNWTRLAGELTDHFRVIAPDLPPFGEAPTDPDRGYGYAAQVDRIHQLVQAMDLSLVHVGGNSMGGAIAGAYAAAHPETVRSLWLLAPAAVADAPPSELDEHVAAGGKNPLLPATREQYFELMDWVFHEPPYIPAPVQWVLAQQAVAQRDRRSRVLEQIHADPLDLAAALDGVGVPTLITWGEHDRLLAVGGARILDQALPDSQLHLMPATGHVP 819
            L GG G  ++L+HGF  DK NW R+A  LT H RVIAPDLP FG++  DP+  Y  + QV+R+H   QA+ L   H+GGNSMGG IAGAYAA +P  V++LWLLAP  V  A PSEL E + A G+NPL     + +  L+D+VF E PYIP P+   LA+Q V  R    ++   ++ DPL L A + G+ VP LI WG  DRL+ V GARIL   +PD+++ +MP  GH+P
Sbjct:   11 LSGGRGDAIVLLHGFSADKSNWVRVAKYLTPHLRVIAPDLPGFGDSTRDPNARYAISDQVERVHAFAQALRLDSFHLGGNSMGGTIAGAYAARYPHEVKTLWLLAPGGVRSAEPSELQE-LMARGENPLFIRDADGFERLLDFVFVERPYIPRPIARYLAEQGVRNRPFNEKISADLNGDPLALEATVKGLSVPALIVWGARDRLVHVSGARILGSVMPDAKVVVMPNVGHIP 242          
BLAST of mRNA_C-australica_Contig_10400.1.1 vs. uniprot
Match: UPI001F215B3F (alpha/beta fold hydrolase n=1 Tax=Desulfoluna sp. ASN36 TaxID=2810562 RepID=UPI001F215B3F)

HSP 1 Score: 226 bits (576), Expect = 1.250e-69
Identity = 115/265 (43.40%), Postives = 168/265 (63.40%), Query Frame = 1
Query:   25 PQTAYQLALTLERGNAGLDVSEVSIGDVTLPVLEGGSGPPLLLIHGFGGDKDNWTRLAGELTDHFRVIAPDLPPFGEAPTDPDRGYGYAAQVDRIHQLVQAMDLSLVHVGGNSMGGAIAGAYAAAHPETVRSLWLLAPAAVADAPPSELDEHVAAGGKNPLLPATREQYFELMDWVFHEPPYIPAPVQWVLAQQAVAQRDRRSRVLEQIHADPLDLAAALDGVGVPTLITWGEHDRLLAVGGARILDQALPDSQLHLMPATGHVP 819
            P+   ++    ERG AGL    +++G++T   LEGG+G PL+L+HGFG +KDNWTR+A  L  HF+VIA DL  +GE+  + D  Y   AQ DR+H+ V A+DL   H+GG+SMGGAI+G Y + H + V SLWL+AP  V  +  SEL   +   GKNPL+    E+Y  L+ +VF + P+IP+P+  V  ++A A +    +V  +I  + L L   L G+ +PTL+ WG+HDR+L V GA IL +A+ ++   +M  TGH+P
Sbjct:   27 PEKVVEVCANSERGKAGLRFKSIAVGELTYAYLEGGTGEPLVLVHGFGANKDNWTRVAEYLAPHFKVIALDLAGYGESTINFDLDYTITAQADRLHEFVDALDLKSFHLGGSSMGGAISGTYGSKHQDRVLSLWLIAPGNVLSSEESELGL-LLKEGKNPLITQNAEEYKSLIAFVFEKTPHIPSPILGVFMREAFANKALNDKVFAEIVKEKLSLEDLLAGLAIPTLVLWGDHDRVLHVSGAGILCKAMVNASCVIMKNTGHLP 290          
BLAST of mRNA_C-australica_Contig_10400.1.1 vs. uniprot
Match: A0A128F8Z8_9GAMM (Lipase 1 n=1 Tax=Grimontia celer TaxID=1796497 RepID=A0A128F8Z8_9GAMM)

HSP 1 Score: 226 bits (576), Expect = 1.290e-69
Identity = 127/283 (44.88%), Postives = 173/283 (61.13%), Query Frame = 1
Query:    1 LVFLYIVSP-QTAYQLALTLERGNAGLDVSEVSIGDVTLPVLEGGSGPPLLLIHGFGGDKDNWTRLAGELTDHFRVIAPDLPPFGEAPTDPDRGYGYAAQVDRIHQLVQAMDLSLVHVGGNSMGGAIAGAYAAAHPETVRSLWLLAPAAVADAPPSELDEHVAAGGKNPLLPATREQYFELMDWVFHEPPYIPAPVQWVLAQQAVAQRDRRSRVLEQIH---------ADPLDLAAALDGVGVPTLITWGEHDRLLAVGGARILDQALPDSQLHLMPATGHVP 819
            LV  Y+++P +  ++  +  ER  AGL +   +I +  +  LEGGSG PLLL+HGFG DKDNW R++  LT  +RVIAPDLP FGE+   PD  Y   AQV+R+   V+A+ LS  H+GGNSMGG IAG YA  HPE V SLWLL P  VA +P SE+   +    +  +L    EQY EL+ + FH+PP+IP  +   LA++A       S++ +QIH           PLD    L+G   PTLITWG++DR+L V GA IL + +P S++ +M   GH+P
Sbjct:   11 LVIAYVMTPAEKRFEWGVATERKMAGLVLKTTTISEGEVRYLEGGSGTPLLLLHGFGADKDNWVRMSKHLTGKYRVIAPDLPGFGESLKQPDLNYDVPAQVERLKAFVEAIGLSEFHIGGNSMGGYIAGNYAVEHPEQVLSLWLLNPLGVATSPDSEMFAMLRQQERPAVLVGDAEQYKELLAFAFHKPPFIPGFIIKELAKRAQVSFPLNSQIFQQIHHIDDGQVHFTVPLD--TVLEGFHKPTLITWGDNDRVLHVAGADILGKLVPQSEVQVMKDMGHLP 291          
BLAST of mRNA_C-australica_Contig_10400.1.1 vs. uniprot
Match: R1IGH2_9GAMM (Alpha/beta hydrolase fold protein n=10 Tax=Vibrionaceae TaxID=641 RepID=R1IGH2_9GAMM)

HSP 1 Score: 225 bits (573), Expect = 3.770e-69
Identity = 124/274 (45.26%), Postives = 168/274 (61.31%), Query Frame = 1
Query:   25 PQTAYQLALTLERGNAGLDVSEVSIGDVTLPVLEGGSGPPLLLIHGFGGDKDNWTRLAGELTDHFRVIAPDLPPFGEAPTDPDRGYGYAAQVDRIHQLVQAMDLSLVHVGGNSMGGAIAGAYAAAHPETVRSLWLLAPAAVADAPPSELDEHVAAGGKNPLLPATREQYFELMDWVFHEPPYIPAPVQWVLAQQAVAQRDRRSRVLEQIH---------ADPLDLAAALDGVGVPTLITWGEHDRLLAVGGARILDQALPDSQLHLMPATGHVP 819
            P+  ++L ++ ER  +GL +   +I +  +  LEGGSG PLLL+HGFG DKDNW R+A  LT  +RVIAPDLP FGE+   PD  Y   AQV R+    +++ LS  H+GGNSMGG IAG YA  HP+ V SLWLL P  VA +P SE+   +    +  +L    EQY EL+ + FH+PP+IP  +   LA++A A     S++ +QIH           PLD    L+G   PTLITWG+ DR+L V GA IL + +P S++H+M   GH+P
Sbjct:   21 PEKLFELGISAERRISGLTLKTSNIEEGEIAYLEGGSGTPLLLLHGFGADKDNWVRMAKHLTGKYRVIAPDLPGFGESFKQPDLNYDVPAQVARLKAFAESIGLSKFHIGGNSMGGYIAGNYAVEHPDQVLSLWLLNPLGVATSPDSEMFAMLRQQERPAVLVGDAEQYRELLAFAFHKPPFIPGVMIKELAKRAEASFPLNSQIFQQIHHLNDGQVHFTVPLD--TVLEGFERPTLITWGDKDRVLHVAGADILGKLVPQSEVHVMKDMGHLP 292          
BLAST of mRNA_C-australica_Contig_10400.1.1 vs. uniprot
Match: A0A2T5MJ18_9GAMM (Alpha/beta hydrolase n=1 Tax=Stenotrophobium rhamnosiphilum TaxID=2029166 RepID=A0A2T5MJ18_9GAMM)

HSP 1 Score: 224 bits (572), Expect = 5.170e-69
Identity = 115/270 (42.59%), Postives = 172/270 (63.70%), Query Frame = 1
Query:   10 LYIVSPQTAYQLALTLERGNAGLDVSEVSIGDVTLPVLEGGSGPPLLLIHGFGGDKDNWTRLAGELTDHFRVIAPDLPPFGEAPTDPDRGYGYAAQVDRIHQLVQAMDLSLVHVGGNSMGGAIAGAYAAAHPETVRSLWLLAPAAVADAPPSELDEHVAAGGKNPLLPATREQYFELMDWVFHEPPYIPAPVQWVLAQQAVAQRDRRSRVLEQIHADPLDLAAALDGVGVPTLITWGEHDRLLAVGGARILDQALPDSQLHLMPATGHVP 819
            LY   P+   +LA+  ER  A L   E+ +  +    LEGG G PL+LIHGFG DK+N+TR+A  LT  F VI PDLP FGE+    D  Y  A+QV+R+H LVQA+ L  VH+GG+SMGG IA +YAA +P    S+WLLAPA +  APPS+++  +  GG+NPL+ +  +++  +  +V  +PP++P     V+ + AVA  +  +++ +QI ++P  L + + G+ VP  I WG+ DR L VGGA+IL   +P++ + ++P  GH+P
Sbjct:   19 LYYACPEKLVKLAVEGERAAASLSRHEIDVAGLKYVYLEGGKGEPLVLIHGFGADKENFTRVAKFLTPRFHVIIPDLPGFGESGKPADGIYTVASQVERVHALVQALGLKTVHLGGSSMGGNIAASYAAKYPTETASIWLLAPAGLGTAPPSDVELSLKDGGRNPLIASNPDEFAAVFKFVMADPPFLPRRFIDVMGRTAVANHELNAKIFQQIRSEP-PLESRVPGLTVPARIVWGDKDRALNVGGAKILAGLMPNASVLILPGIGHLP 287          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10400.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D4SET3_9GAMM6.590e-8046.69Alpha/beta hydrolase n=1 Tax=Salinisphaeraceae bac... [more]
A0A5C7L973_9GAMM7.560e-7946.32Alpha/beta fold hydrolase n=1 Tax=Sinobacteraceae ... [more]
A0A2S8K548_9DELT5.770e-7344.00Alpha/beta hydrolase n=1 Tax=Desulfobacteraceae ba... [more]
A0A534SR54_9DELT2.180e-7245.05Alpha/beta hydrolase n=2 Tax=Deltaproteobacteria b... [more]
A0A5C7UE22_RHISP3.480e-7143.33Alpha/beta fold hydrolase n=1 Tax=Rhizobium sp. Ta... [more]
A0A534YUQ7_9DELT6.430e-7149.36Alpha/beta hydrolase n=1 Tax=Deltaproteobacteria b... [more]
UPI001F215B3F1.250e-6943.40alpha/beta fold hydrolase n=1 Tax=Desulfoluna sp. ... [more]
A0A128F8Z8_9GAMM1.290e-6944.88Lipase 1 n=1 Tax=Grimontia celer TaxID=1796497 Rep... [more]
R1IGH2_9GAMM3.770e-6945.26Alpha/beta hydrolase fold protein n=10 Tax=Vibrion... [more]
A0A2T5MJ18_9GAMM5.170e-6942.59Alpha/beta hydrolase n=1 Tax=Stenotrophobium rhamn... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10400contigC-australica_Contig_10400:3..821 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1056512.D515_00959
PFAMsAbhydrolase_1
Model size819
Max annot lvl135623|Vibrionales
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.17e-70
EggNOG OGsCOG0596@1|root,COG0596@2|Bacteria,1QVQ5@1224|Proteobacteria,1T2GP@1236|Gammaproteobacteria,1Y3C3@135623|Vibrionales
DescriptionSerine aminopeptidase, S33
Cds size819
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586778.4398587-CDS-C-australica_Contig_10400:2..8211682586778.4398587-CDS-C-australica_Contig_10400:2..821Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10400 3..821 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10400.1.1prot_C-australica_Contig_10400.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10400 3..821 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10400.1.1

>prot_C-australica_Contig_10400.1.1 ID=prot_C-australica_Contig_10400.1.1|Name=mRNA_C-australica_Contig_10400.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=273bp
LVFLYIVSPQTAYQLALTLERGNAGLDVSEVSIGDVTLPVLEGGSGPPLL
LIHGFGGDKDNWTRLAGELTDHFRVIAPDLPPFGEAPTDPDRGYGYAAQV
DRIHQLVQAMDLSLVHVGGNSMGGAIAGAYAAAHPETVRSLWLLAPAAVA
DAPPSELDEHVAAGGKNPLLPATREQYFELMDWVFHEPPYIPAPVQWVLA
QQAVAQRDRRSRVLEQIHADPLDLAAALDGVGVPTLITWGEHDRLLAVGG
ARILDQALPDSQLHLMPATGHVP
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mRNA from alignment at C-australica_Contig_10400:3..821-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10400.1.1 ID=mRNA_C-australica_Contig_10400.1.1|Name=mRNA_C-australica_Contig_10400.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=819bp|location=Sequence derived from alignment at C-australica_Contig_10400:3..821- (Chrysoparadoxa australica CS_1217)
CTGGTGTTTCTCTACATCGTATCGCCGCAAACCGCCTATCAGCTCGCGCT GACGCTGGAGCGCGGCAACGCCGGCCTGGACGTCAGCGAGGTGTCGATCG GCGATGTGACCCTGCCGGTGCTCGAAGGCGGCAGCGGACCGCCTCTGCTG CTGATCCACGGCTTCGGCGGCGACAAGGACAACTGGACCCGCCTGGCGGG TGAGCTGACCGATCACTTCCGCGTGATCGCCCCCGATCTGCCGCCGTTCG GTGAAGCGCCGACCGACCCCGATCGTGGCTATGGCTATGCGGCGCAGGTG GACCGCATCCACCAACTGGTGCAGGCGATGGATCTGTCGCTGGTACACGT CGGCGGCAACTCGATGGGTGGCGCCATCGCCGGGGCCTATGCGGCCGCGC ATCCGGAAACGGTCCGGTCGCTGTGGCTGCTGGCACCCGCGGCGGTGGCC GACGCGCCGCCCAGCGAGCTGGACGAGCACGTGGCGGCGGGCGGCAAGAA CCCGCTGCTGCCGGCCACACGCGAGCAATACTTCGAGTTGATGGACTGGG TGTTTCACGAGCCGCCCTACATACCGGCCCCGGTCCAGTGGGTGCTGGCC CAGCAGGCGGTGGCGCAACGTGACCGGCGGTCGAGGGTGCTGGAACAGAT TCACGCCGATCCGCTGGACCTGGCCGCGGCGCTGGACGGGGTGGGCGTGC CCACGCTGATTACCTGGGGCGAGCATGACCGCCTGCTTGCGGTCGGCGGT GCCCGAATCCTGGATCAGGCGCTGCCGGACAGCCAGTTGCACCTGATGCC GGCAACCGGCCATGTCCCC
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Coding sequence (CDS) from alignment at C-australica_Contig_10400:3..821-

>mRNA_C-australica_Contig_10400.1.1 ID=mRNA_C-australica_Contig_10400.1.1|Name=mRNA_C-australica_Contig_10400.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=819bp|location=Sequence derived from alignment at C-australica_Contig_10400:3..821- (Chrysoparadoxa australica CS_1217)
CTGGTGTTTCTCTACATCGTATCGCCGCAAACCGCCTATCAGCTCGCGCT
GACGCTGGAGCGCGGCAACGCCGGCCTGGACGTCAGCGAGGTGTCGATCG
GCGATGTGACCCTGCCGGTGCTCGAAGGCGGCAGCGGACCGCCTCTGCTG
CTGATCCACGGCTTCGGCGGCGACAAGGACAACTGGACCCGCCTGGCGGG
TGAGCTGACCGATCACTTCCGCGTGATCGCCCCCGATCTGCCGCCGTTCG
GTGAAGCGCCGACCGACCCCGATCGTGGCTATGGCTATGCGGCGCAGGTG
GACCGCATCCACCAACTGGTGCAGGCGATGGATCTGTCGCTGGTACACGT
CGGCGGCAACTCGATGGGTGGCGCCATCGCCGGGGCCTATGCGGCCGCGC
ATCCGGAAACGGTCCGGTCGCTGTGGCTGCTGGCACCCGCGGCGGTGGCC
GACGCGCCGCCCAGCGAGCTGGACGAGCACGTGGCGGCGGGCGGCAAGAA
CCCGCTGCTGCCGGCCACACGCGAGCAATACTTCGAGTTGATGGACTGGG
TGTTTCACGAGCCGCCCTACATACCGGCCCCGGTCCAGTGGGTGCTGGCC
CAGCAGGCGGTGGCGCAACGTGACCGGCGGTCGAGGGTGCTGGAACAGAT
TCACGCCGATCCGCTGGACCTGGCCGCGGCGCTGGACGGGGTGGGCGTGC
CCACGCTGATTACCTGGGGCGAGCATGACCGCCTGCTTGCGGTCGGCGGT
GCCCGAATCCTGGATCAGGCGCTGCCGGACAGCCAGTTGCACCTGATGCC
GGCAACCGGCCATGTCCCC
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