mRNA_C-australica_Contig_1040.4.2 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_1040.4.2 vs. uniprot
Match: D7FPU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPU0_ECTSI) HSP 1 Score: 129 bits (323), Expect = 3.170e-33 Identity = 77/186 (41.40%), Postives = 101/186 (54.30%), Query Frame = 1
Query: 7 LRPLFTGASWAGTIVWPASVDLASKLMPQLSPSTNNLSTA--GNGSGVPGMAARLMKGRVLLTEQAELLELLKANIGSNFRSDGSSDNDIHAMRLDWKSEEDRNEAIAWL-----------GGPA----------DVVLSADCVYEPLYGNSWQALALLLNALIDVPTLALVSLERRTADGIEKFL 495
+ P+F+GA WAGT+VWPA++DL + L + + G G GVPGM ARL+ V+LTEQ ELL LL N+ NF + I LDW+ E D + +A L G P D VL ADCV+EPLYG+SW+ALA ++ L D T L S+ERR DG+ +FL
Sbjct: 27 MAPIFSGACWAGTVVWPAALDLCDYMSEHLRQAMVGATVVELGCGIGVPGMVARLLGATVVLTEQDELLSLLDRNLDGNFAGHPRGEGGIRREALDWEREADTDGLLASLERSGTAPGEAEGEPGAGVRRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVPEFL 212
BLAST of mRNA_C-australica_Contig_1040.4.2 vs. uniprot
Match: A0A1V9YH22_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YH22_9STRA) HSP 1 Score: 127 bits (318), Expect = 4.450e-33 Identity = 82/178 (46.07%), Postives = 107/178 (60.11%), Query Frame = 1
Query: 7 LRPLFTGASWAGTIVWPASVDLASKLMPQLSPSTNNLSTAGNGSGVPGMAARLMKGR-VLLTEQAELLELLKANIGSNFRSDGSSDNDIHAMRLDWKSEEDRNEAIAWLGGPADVVLSADCVYEPLYGNSWQALALLLNALI--DVPTLALVSLERRTADGIEKFLARLKKKQYLAAS 531
L PLF GA+WAGT+VW A+ L++ ++ +L S+ + G G GVPGM A L+ + V+LTEQ EL+ LL+ NI NF + N + A L W E R A G DV+LS DCVYEPLYG SW+ALA ++ L + ALVS+ERR DGI++FLA L L AS
Sbjct: 40 LAPLFCGAAWAGTLVWEAAELLSNYMLNELDVSSLRVLELGAGLGVPGMVAGLLGAQHVVLTEQPELVPLLRTNIRRNF----AGANSVAAAELSWGREATR--AFVATHGTFDVLLSCDCVYEPLYGESWRALAHTMDELCAANPACRALVSVERRHGDGIDRFLAFLPTATRLTAS 211
BLAST of mRNA_C-australica_Contig_1040.4.2 vs. uniprot
Match: A0A485LF75_9STRA (Aste57867_19896 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LF75_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.060e-31 Identity = 77/182 (42.31%), Postives = 110/182 (60.44%), Query Frame = 1
Query: 1 NNLRPLFTGASWAGTIVWPASVDLASKLMPQLSPSTNNLSTAGNGSGVPGMAARLMKGR-VLLTEQAELLELLKANIGSNFRSDGSSDNDIHAMRLDWKSEEDRNEAIAWLG--GPADVVLSADCVYEPLYGNSWQALALLLNALI--DVPTLALVSLERRTADGIEKFLARLKKKQYLAAS 531
+ L PLF GA+WAGT+VW A++ L++ L+ + + + G G GVPGM A L+ + V++TEQ EL+ LL+ NI NF++ + + A L W DR A A+ G D+VLS DC+Y+PLYG SW+ALAL ++ L + + LVS+ERR DGI+ FLA L L A+
Sbjct: 37 DELAPLFAGAAWAGTLVWDAAIVLSNFLLNDVDLTAKRVIELGAGIGVPGMVASLLGAKDVVITEQPELVPLLRTNIRRNFQTIDAG-RSVAAAALSW----DRAAATAFCDTFGTFDIVLSCDCIYQPLYGESWRALALTMDVLCHRNPACVVLVSVERRHEDGIDDFLAFLTTDTNLRAA 213
BLAST of mRNA_C-australica_Contig_1040.4.2 vs. uniprot
Match: A0A024UK56_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UK56_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.700e-31 Identity = 76/184 (41.30%), Postives = 107/184 (58.15%), Query Frame = 1
Query: 1 NNLRPLFTGASWAGTIVWPASVDLASKLMPQLSPSTNNLSTAGNGSGVPGMAARLMKGR-VLLTEQAELLELLKANIGSNFRSDGSSDNDIHAMRLDWKSEEDRNEAIAWLGGPADVVLSADCVYEPLYGNSWQALALLLNALI--DVPTLALVSLERRTADGIEKFLARLKKKQYLAASPFTT 543
+ L PLF GA+WAGT+VW A+V LA+ ++ + + + G G GVPGM A ++ + V+LTEQ EL+ LL+ NI NF + G + A L W D A G D+VLS DC+Y+PLYG SW+ALAL ++ L + + LV++ERR DGI+ FL L L A+ + T
Sbjct: 37 DELAPLFAGAAWAGTLVWDAAVVLANHVLNDVQVDSLRVLELGAGIGVPGMVASILGAKHVVLTEQPELVPLLRTNIRRNFPNGG-----VTASALSWGV--DAANAFCDEHGAFDIVLSCDCIYQPLYGESWRALALTMDVLCKRNPACIVLVAVERRHEDGIDAFLEYLPVATALQATHYRT 213
BLAST of mRNA_C-australica_Contig_1040.4.2 vs. uniprot
Match: A0A3M6VH00_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VH00_9STRA) HSP 1 Score: 124 bits (310), Expect = 3.100e-31 Identity = 80/194 (41.24%), Postives = 111/194 (57.22%), Query Frame = 1
Query: 1 NNLRPLFTGASWAGTIVWPASVDLASKLMP----QLSPSTNNLSTA--GNGSGVPGMAARLMKGR-VLLTEQAELLELLKANIGSN---FRSDGSSDNDIH--------AMRLDWKSEEDRNEAIAWLGGPADVVLSADCVYEPLYGNSWQALALLLNAL--IDVPTLALVSLERRTADGIEKFLARLKKKQYL 522
+ L PLF+GA+WAGT++W A+V LA + + QL TN+L G G GVPGMAAR+ + V+LTEQ ELL L+ N+ +N R ++ D H A L W ++ + + DVVLS DC+YEPLYG SWQALA + L ++ + L+ +ERR DGI+KFL ++KK L
Sbjct: 82 DELAPLFSGAAWAGTLLWDAAVHLARRFLTDYRHQLQDPTNSLRVIELGAGIGVPGMAARMAGAKYVVLTEQDELLRLMHVNLAANREVLRVADGTELDEHVDDKGQIVARALSWGVQQTKEYMAQYPDEKVDVVLSCDCIYEPLYGTSWQALAQTMELLCVVNPKCIVLMGVERRNQDGIDKFLEFVEKKTKL 275
BLAST of mRNA_C-australica_Contig_1040.4.2 vs. uniprot
Match: W4G7N3_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7N3_9STRA) HSP 1 Score: 121 bits (303), Expect = 7.940e-31 Identity = 77/184 (41.85%), Postives = 107/184 (58.15%), Query Frame = 1
Query: 1 NNLRPLFTGASWAGTIVWPASVDLASKLMPQLSPSTNNLSTAGNGSGVPGMAARLMKGR-VLLTEQAELLELLKANIGSNFRSDGSSDNDIHAMRLDWKSEEDRNEAIAWLGGPADVVLSADCVYEPLYGNSWQALALLLNALI--DVPTLALVSLERRTADGIEKFLARLKKKQYLAASPFTT 543
+ L PLF GA+WAGT+VW A+V LA+ L+ + + + G G GVPGM A ++ + V++TEQ EL+ LL+ NI NF + G + A L W A G DVVLS DC+Y+PLYG SW ALA+ ++ L + + LVS+ERR DGI+ FLA L + L A+ + T
Sbjct: 39 DELAPLFAGAAWAGTLVWDAAVVLANHLLNDVRLESLRVLELGAGIGVPGMVASILGAKHVVITEQPELVPLLRTNIRRNFPNGG-----VTATALSWGVAA--TNAFCDSFGAFDVVLSCDCIYQPLYGESWCALAVTMDVLCKRNPACVVLVSVERRHEDGIDAFLAYLPEATSLHATLYRT 215
BLAST of mRNA_C-australica_Contig_1040.4.2 vs. uniprot
Match: A0A2D4CKG6_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CKG6_PYTIN) HSP 1 Score: 121 bits (304), Expect = 8.080e-31 Identity = 79/178 (44.38%), Postives = 101/178 (56.74%), Query Frame = 1
Query: 1 NNLRPLFTGASWAGTIVWPASVDLASKLMPQ----LSPSTNNLSTA--GNGSGVPGMAARLMKGR-VLLTEQAELLELLKANIGSN---FRSDGSSDNDIHAMRLDWKSEEDRNEAIAWLGGPADVVLSADCVYEPLYGNSWQALALLLNALID-VPTLA-LVSLERRTADGIEKFLA 498
+ L PLF+GA+WAGT++W A+V L + + Q LS S N L G G GVPGMAAR+ V++TEQ +LLEL+ N+ N R + IHA L W E P DV+LS DC+YEPLYG SW+ALA + L P A L+ +ERR DGI+KFLA
Sbjct: 45 DELAPLFSGAAWAGTLLWDAAVHLTRRFLEQYREQLSRSDNQLRVIELGAGIGVPGMAARVAGAHHVIITEQDDLLELMHRNLADNASVLRKTTARSAGIHARPLSWGVSETTKYLDEHADEPIDVILSCDCIYEPLYGQSWRALAQTMEILCKRYPHAAVLMCVERRNQDGIDKFLA 222
BLAST of mRNA_C-australica_Contig_1040.4.2 vs. uniprot
Match: A0A3R7GSU0_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GSU0_9STRA) HSP 1 Score: 120 bits (301), Expect = 2.840e-30 Identity = 78/186 (41.94%), Postives = 107/186 (57.53%), Query Frame = 1
Query: 1 NNLRPLFTGASWAGTIVWPASVDLASKLMP----QLSPSTNNLSTA--GNGSGVPGMAARLMKGR-VLLTEQAELLELLKANIGSN-----------FRSDGSSDNDIHAMRLDWKSEEDRNEAIAWLGGPADVVLSADCVYEPLYGNSWQALA--LLLNALIDVPTLALVSLERRTADGIEKFLA 498
+ L PLF+GA+WAGT++W A+V L + + QLS TN+L G G GVPGMAAR+ + V+LTEQ +LL L+ N+ +N F +D + I A L W +E + + DVVLS DC+YEPLYG SW+ LA + L L + + L+ +ERR ADGI+KFLA
Sbjct: 44 DELAPLFSGAAWAGTLLWDAAVHLTRRFLTDYRAQLSSPTNSLRVLELGAGIGVPGMAARVAGAKHVVLTEQDDLLRLMYVNLAANAEVLRLPSGEEFDTDVENKGAIVARPLSWGVQETKEYLEKFKAEQVDVVLSCDCIYEPLYGTSWRELAQTMELLCLANPKCVILMGVERRNADGIDKFLA 229
BLAST of mRNA_C-australica_Contig_1040.4.2 vs. uniprot
Match: A0A067CCX4_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CCX4_SAPPC) HSP 1 Score: 118 bits (296), Expect = 9.660e-30 Identity = 76/178 (42.70%), Postives = 105/178 (58.99%), Query Frame = 1
Query: 7 LRPLFTGASWAGTIVWPASVDLASKLMPQLSPSTNNLSTAGNGSGVPGMAARLMKG-RVLLTEQAELLELLKANIGSNFRSDGSSDNDIHAMRLDWKSEEDRNEAIAWLGGPADVVLSADCVYEPLYGNSWQALALLLNALI--DVPTLALVSLERRTADGIEKFLARLKKKQYLAAS 531
L PLF GA+WAGT+VW A+ +++ ++ +L T + G G GVPGM A ++ V+LTEQ EL+ LL+ NI NF S +++ A L W +E A G D+VL DC+YEPLYG SW+ALAL ++ L + LVS+ERR DGI+ FLA L L+A+
Sbjct: 39 LAPLFCGAAWAGTLVWEAAELISNYVLNELDVRTLRVVELGAGLGVPGMVAGILGAPHVVLTEQPELVPLLRTNIRRNF-----SASNVEAAVLSWGTEA--TTAFCARYGAFDLVLCCDCIYEPLYGQSWRALALSMDVLCAANPACRVLVSVERRHGDGIDAFLAFLPDATSLSAT 209
BLAST of mRNA_C-australica_Contig_1040.4.2 vs. uniprot
Match: A0A6A3UNC4_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UNC4_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.020e-29 Identity = 76/186 (40.86%), Postives = 102/186 (54.84%), Query Frame = 1
Query: 1 NNLRPLFTGASWAGTIVWPASVDLASKLMP----QLSPSTNNLSTA--GNGSGVPGMAARLMKGR-VLLTEQAELLELLKANIGSNFR-----------SDGSSDNDIHAMRLDWKSEEDRNEAIAWLGGPADVVLSADCVYEPLYGNSWQALALLLNALIDV--PTLALVSLERRTADGIEKFLA 498
+ L PLF+GA+WAGT++W A+V LA + + QL TN+L G G GVPGMAAR+ + V+LTEQ ELL L+ N+ +N D I A L W ++ + + DVVLS DC+YEPLYG SW+ALA + L + L+ +ERR DGI+KFLA
Sbjct: 39 DELAPLFSGAAWAGTLLWDAAVHLARRFLTDYRQQLEDPTNSLRVIELGAGIGVPGMAARVAGAKHVVLTEQDELLRLMHVNLAANAEVLRLPGGRELGEDVDDKGTIVARSLSWGVQQTKEYLAQYPDEEVDVVLSCDCIYEPLYGTSWRALAQTMELLCQANPKCVVLMGVERRNQDGIDKFLA 224 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1040.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1040.4.2 >prot_C-australica_Contig_1040.4.2 ID=prot_C-australica_Contig_1040.4.2|Name=mRNA_C-australica_Contig_1040.4.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=181bp NNLRPLFTGASWAGTIVWPASVDLASKLMPQLSPSTNNLSTAGNGSGVPGback to top mRNA from alignment at C-australica_Contig_1040:8026..8952- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1040.4.2 ID=mRNA_C-australica_Contig_1040.4.2|Name=mRNA_C-australica_Contig_1040.4.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=927bp|location=Sequence derived from alignment at C-australica_Contig_1040:8026..8952- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1040:8026..8952- >mRNA_C-australica_Contig_1040.4.2 ID=mRNA_C-australica_Contig_1040.4.2|Name=mRNA_C-australica_Contig_1040.4.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=543bp|location=Sequence derived from alignment at C-australica_Contig_1040:8026..8952- (Chrysoparadoxa australica CS_1217)back to top |