mRNA_C-australica_Contig_1040.3.5 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: A0A835YVP3_9STRA (GTP binding protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP3_9STRA) HSP 1 Score: 225 bits (574), Expect = 2.600e-69 Identity = 139/285 (48.77%), Postives = 177/285 (62.11%), Query Frame = 1
Query: 1 MGQEVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAVLLHLGRLVAPPSTSIQHLSNADAMQTCTLDPSQGAQA---SIDSPNTRL-LTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
+G EVEEGN+E+KL LVAP R HL+TQ++WRLNEG G A+Y+IG +DDG P GL +L ASL+TL+ +AA A++ V RP + R R + AA+ +RVAV+G AGKSTL+GVLTRG DNGRGLARMQVFRH+HEV +G TSSIS Q + L L +A + +D S G +A S P L +DQPGH KYLKTTL+GL GH+ +Y +L + A G+Q MTREH+AI+LALGVPL +V
Sbjct: 11 LGPEVEEGNIEYKLMLVAPPPERIVHLSTQMNWRLNEGH-GTAVYMIGYTDDGEPTGLAPRELGASLKTLRAIAAAARAEIVTVAR------RP--TTALGDRFAAARELESESEGAARVVRVAVVGQEGAGKSTLVGVLTRGKNDNGRGLARMQVFRHNHEVSDGRTSSISHQPLTLQL---------------DATTGEVLGVDSSNGNRAYELSRSCPTRHCTLALLDQPGHAKYLKTTLFGLAGHAPNYALLAVDAAAGVQPMTREHMAIALALGVPLIIV 271
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: D7FYC0_ECTSI (GTPBP2, EF1alpha-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYC0_ECTSI) HSP 1 Score: 232 bits (592), Expect = 1.660e-66 Identity = 143/301 (47.51%), Postives = 185/301 (61.46%), Query Frame = 1
Query: 7 QEVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRC--FCGTVDAA--KGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAVLLHLGRLVA------------------PPSTSIQHLSNADAMQTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
+E +EGNVE+KL LV P +R +HL TQ++WRLNEG G +Y++G DDG G+ +DL AS++TL+ M V A++ +++ G +VARV + VRR F G + +GLR+ V+GH AGKSTL+ VLT+G DNGRGLARMQVFRH+HEVFNG TSSISQQ V G A P S+ + LD G + +R+LTFIDQPGHEKYLKTTL G+T +LDY MLV+ +G+QRMTREHLAI+LAL +P+FVV
Sbjct: 222 EEDDEGNVEYKLKLVNPPLARLEHLFTQMNWRLNEGR-GECMYMLGYEDDGKATGMSPSDLSASIKTLRVMMEAVGAKIANMQVQAGAGGGKLKVARVTV----VRRAALFDGLPPDSERRGLRLGVLGHAGAGKSTLVSVLTKGMSDNGRGLARMQVFRHNHEVFNGQTSSISQQGVSASNGFASAWARKGNGSAGXXXXXXGRPRGYSVDESGHGKRGLRKRLDGG-GLGGEEEDGESRVLTFIDQPGHEKYLKTTLTGMTASALDYSMLVVSGVDGVQRMTREHLAIALALQLPIFVV 516
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: W4G9Q7_9STRA (Tr-type G domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G9Q7_9STRA) HSP 1 Score: 222 bits (565), Expect = 4.600e-66 Identity = 139/278 (50.00%), Postives = 171/278 (61.51%), Query Frame = 1
Query: 10 EVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAVLLHLGRLVAPPSTSIQHLSNADAMQTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
EVE GNVE+KL L+ PT R QHL TQL+WRLNEG G A Y +GVSDDG +G+ DL+ SL TL M V+ AQ+ V +R G + ARV + C T A K +RV+VIG VD+GKSTLIGVLTRGC+D+G GLARMQVFRH HE+ NG TSSIS+Q LG L + +A +SID+ +T+L+ F D GH++YLK T GLT DY MLV+ AT G+Q MTREHL I L LG+ +FVV
Sbjct: 18 EVEHGNVEYKLQLLNPTAVRFQHLVTQLNWRLNEGH-GYAFYELGVSDDGLVIGMPPEDLETSLNTLFRMCQVLSAQMH-VHTLREGMQHTYKAARVAV------SCIAET-HAKKQVRVSVIGDVDSGKSTLIGVLTRGCLDDGNGLARMQVFRHLHEIENGRTSSISEQI----LGVTKEGKICKFNTLESRNA-------------SSIDAQSTKLIMFSDLAGHQRYLKITASGLTSQFPDYAMLVVDATAGVQSMTREHLRIVLGLGIGVFVV 269
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: W4GA11_9STRA (Tr-type G domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GA11_9STRA) HSP 1 Score: 222 bits (565), Expect = 4.480e-65 Identity = 139/278 (50.00%), Postives = 171/278 (61.51%), Query Frame = 1
Query: 10 EVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAVLLHLGRLVAPPSTSIQHLSNADAMQTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
EVE GNVE+KL L+ PT R QHL TQL+WRLNEG G A Y +GVSDDG +G+ DL+ SL TL M V+ AQ+ V +R G + ARV + C T A K +RV+VIG VD+GKSTLIGVLTRGC+D+G GLARMQVFRH HE+ NG TSSIS+Q LG L + +A +SID+ +T+L+ F D GH++YLK T GLT DY MLV+ AT G+Q MTREHL I L LG+ +FVV
Sbjct: 18 EVEHGNVEYKLQLLNPTAVRFQHLVTQLNWRLNEGH-GYAFYELGVSDDGLVIGMPPEDLETSLNTLFRMCQVLSAQMH-VHTLREGMQHTYKAARVAV------SCIAET-HAKKQVRVSVIGDVDSGKSTLIGVLTRGCLDDGNGLARMQVFRHLHEIENGRTSSISEQI----LGVTKEGKICKFNTLESRNA-------------SSIDAQSTKLIMFSDLAGHQRYLKITASGLTSQFPDYAMLVVDATAGVQSMTREHLRIVLGLGIGVFVV 269
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: A0A523TG70_9ARCH (Elongation factor 1-alpha n=1 Tax=Candidatus Heimdallarchaeota archaeon TaxID=2026747 RepID=A0A523TG70_9ARCH) HSP 1 Score: 220 bits (560), Expect = 1.740e-64 Identity = 133/282 (47.16%), Postives = 182/282 (64.54%), Query Frame = 1
Query: 1 MGQEVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAVLLHL-GRLVAPPSTSIQHLSNADAMQTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
+ +E +EGN+E+KL L+ PT +R +HL TQ+ +RL EG G AIY IG+ D+G P GL E +LK S++TLK+MA + A + ++R EG G+VA V +RR+ + +R+AV+G+VD+GKSTL+GVLT+G +DNGRGLAR+ VFRH HE+ G TSSISQQ + GR+V S Q + I ++++LTFID GHEKYLKTTL+GLTGH DYV+LV+GA G+ MT+EHL I+LAL VP+ +V
Sbjct: 12 LDKESDEGNIEYKLKLIDPTDTRFEHLVTQMKFRLQEGL-GEAIYEIGIEDNGYPKGLSEKELKLSIETLKKMAKELNAD---ITILREREGEIGKVAEVLVRRLAD--------EDFLEIRIAVVGNVDSGKSTLVGVLTQGKLDNGRGLARVNVFRHKHEIETGRTSSISQQIMGYDSKGRIVNYESLGEQ------------------SWTKIIEGSSKVLTFIDLGGHEKYLKTTLFGLTGHKPDYVLLVVGANMGVVGMTKEHLGIALALKVPIIIV 263
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: A0A485LBK4_9STRA (Aste57867_18893 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBK4_9STRA) HSP 1 Score: 218 bits (555), Expect = 9.520e-64 Identity = 133/279 (47.67%), Postives = 174/279 (62.37%), Query Frame = 1
Query: 10 EVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAV-LLHLGRLVAPPSTSIQHLSNADAMQTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
E+E+GNVE+KL L+ P+ R QHL TQL+WRLNEG G A Y +GVSDDG +G+ DL+ SL TL M V+ A++ V+ +R G + ARV + RI A K +RV+VIG VD+GKSTLIGVLTRGC+D+G GLARMQVFRH HEV NG TSSIS+Q + + + G++ + ++ SN I+ +T+L+ F D GH++YLK T GLT DY MLV+ A G+Q MTREHL I L LG+ +FVV
Sbjct: 7 EIEQGNVEYKLQLLNPSADRFQHLVTQLNWRLNEGH-GYAYYEVGVSDDGMVMGMPPEDLETSLNTLFRMCQVLSAEMH-VQTLREGSQPTYKAARVAVSRIA-------ETHAKKQVRVSVIGDVDSGKSTLIGVLTRGCLDDGNGLARMQVFRHLHEVENGRTSSISEQILGVTNEGKICKFSTLESRNASN------------------IEVQSTKLIMFSDLAGHQRYLKITASGLTSQFPDYAMLVVDAMSGVQSMTREHLRIVLGLGISVFVV 258
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: A0A8J8CP21_9ARCH (Elongation factor 1-alpha n=1 Tax=Asgard group archaeon TaxID=2591838 RepID=A0A8J8CP21_9ARCH) HSP 1 Score: 217 bits (552), Expect = 2.370e-63 Identity = 128/274 (46.72%), Postives = 179/274 (65.33%), Query Frame = 1
Query: 22 GNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAVLLHLGRLVAPPSTSIQHLSNADAMQTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
GN+E+KL L+ PT +R +HL TQ+ +RL EG G AIY IG+ D+G P GL E +L+ S++TL++MA + A + ++R +G G+VA V +RR+ +RVAV G+VD+GKSTL+GVLTRG +DNGRGLAR+ VFRH HE+ G TSSISQQ LG S+ ++ N D D + + + I +++++TFID GHE+YLKTTL+GLTGH DYV++++GA G+ MT+EHL I+LAL VP+ VV
Sbjct: 19 GNIEYKLKLIDPTATRFEHLVTQMKFRLQEGQ-GEAIYEIGIEDNGYPKGLSEEELEMSIETLRKMAKKLNAD---ISVLRTRDGESGKVAEVLVRRLAEEEFL--------EIRVAVAGNVDSGKSTLVGVLTRGKLDNGRGLARVNVFRHKHEIETGRTSSISQQI----LGY------DSVGNIVNYD-------DLTLPSWSDIIEASSKVITFIDLGGHERYLKTTLFGLTGHIPDYVLIIVGANMGIVGMTKEHLGIALALKVPIIVV 263
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: UPI0006451DAC (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006451DAC) HSP 1 Score: 220 bits (561), Expect = 3.040e-63 Identity = 133/281 (47.33%), Postives = 176/281 (62.63%), Query Frame = 1
Query: 1 MGQEVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAVLLHLGRLVAPPSTSIQHLSNADAMQTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
+ EVE GN+E+K LV PT R +HL +QL WRL EG G AIY IGV DDG+ GL + D+ AS+ TLK MA+ + A + + R G G+V V +R+ T D +R+ V+G+VDAGKSTL+GVLTRG +DNGRGLARM +FRH HE+ +G TSSISQ+ V S ++ N ++PS+ + S ++++TFID GHEKYLKTTL+G+TGH DY ML+IGA G MT+EHL I+LAL VP++VV
Sbjct: 111 LAPEVEFGNIEYKFKLVNPTDERLEHLVSQLKWRLGEGM-GEAIYEIGVEDDGSATGLSDEDVAASMDTLKRMASRLNADMTTI---RERNGAKGKVLEVLIRKYTS--------DDFSEVRITVVGNVDAGKSTLLGVLTRGQLDNGRGLARMNIFRHKHEIESGRTSSISQEIVGFD----------SKGNVVNYTNNMHSAMNPSEICELS-----SKIITFIDLAGHEKYLKTTLFGMTGHQPDYAMLMIGANMGCVGMTKEHLGIALALRVPVYVV 364
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: A0A843BZB3_9ARCH (Elongation factor 1-alpha n=1 Tax=Candidatus Heimdallarchaeota archaeon TaxID=2026747 RepID=A0A843BZB3_9ARCH) HSP 1 Score: 215 bits (548), Expect = 9.030e-63 Identity = 130/282 (46.10%), Postives = 181/282 (64.18%), Query Frame = 1
Query: 1 MGQEVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAVLLHL-GRLVAPPSTSIQHLSNADAMQTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
+ +E EEGN+E+KL L+ P +R +HL TQ+ +RL EG G AIY IG+ D+G P GL +LK S++TLK+MA + A + ++R EG G VA V +R+ + +R+AV+G+VD+GKSTL+GVLT+G +DNGRGLAR+ VFRH HE+ G TSSISQQ + GR+V N +++ + + I ++++LTFID GHEKYLKTTL+GLTGH DYV+LV+GA G+ MT+EHL I+LAL VP+ +V
Sbjct: 12 LDKESEEGNIEYKLKLIDPNATRFEHLVTQMKFRLQEGM-GEAIYEIGIEDNGYPKGLSVKELKLSIETLKKMALELNAD---ITVLREREGEIGTVAEVLIRKFAE--------EDFLEIRIAVVGNVDSGKSTLVGVLTQGKLDNGRGLARVNVFRHKHEIETGRTSSISQQIMGYDSRGRIV-----------NYESLN-------EKSWTKIIEGSSKVLTFIDLGGHEKYLKTTLFGLTGHKPDYVLLVVGANMGVVGMTKEHLGIALALKVPIIIV 263
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: A0A024UKI9_9STRA (Tr-type G domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKI9_9STRA) HSP 1 Score: 215 bits (547), Expect = 2.090e-62 Identity = 133/279 (47.67%), Postives = 173/279 (62.01%), Query Frame = 1
Query: 10 EVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAV-LLHLGRLVAPPSTSIQHLSNADAMQTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
EVE+GNVE+KL L+ PT R QHL TQL+WRLNEG G A Y +GV+DDG VG+ DL+ SL TL M V+ A+++ V +R G + ARV + RI A K +RV+VIG D+GKSTLIGVLTRGC+D+G GLARMQV RH HE+ +G TSSIS+Q + + + G++ S ++ S SID+ +T+L+ F D GH++YLK T GLT DY MLV+ AT G+Q MT EHL I L LG+ +FVV
Sbjct: 21 EVEQGNVEYKLQLLHPTADRFQHLVTQLNWRLNEGH-GYAFYELGVADDGMVVGMPPHDLETSLNTLCRMCQVLSAEMQ-VHTVRPGTSDTYKAARVAISRIA-------ETHAKKQVRVSVIGDFDSGKSTLIGVLTRGCLDDGNGLARMQVLRHLHEIEDGRTSSISEQILGVTNEGKICKFSSLESRNAS------------------SIDAQSTKLIMFSDLAGHQRYLKITASGLTSQFPDYAMLVVDATTGVQPMTLEHLRIVLGLGIRVFVV 272 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1040.3.5 >prot_C-australica_Contig_1040.3.5 ID=prot_C-australica_Contig_1040.3.5|Name=mRNA_C-australica_Contig_1040.3.5|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=281bp MGQEVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSback to top mRNA from alignment at C-australica_Contig_1040:2992..4830+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1040.3.5 ID=mRNA_C-australica_Contig_1040.3.5|Name=mRNA_C-australica_Contig_1040.3.5|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1839bp|location=Sequence derived from alignment at C-australica_Contig_1040:2992..4830+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1040:2992..4830+ >mRNA_C-australica_Contig_1040.3.5 ID=mRNA_C-australica_Contig_1040.3.5|Name=mRNA_C-australica_Contig_1040.3.5|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=843bp|location=Sequence derived from alignment at C-australica_Contig_1040:2992..4830+ (Chrysoparadoxa australica CS_1217)back to top |