mRNA_C-australica_Contig_1040.3.5 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1040.3.5
Unique NamemRNA_C-australica_Contig_1040.3.5
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: A0A835YVP3_9STRA (GTP binding protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP3_9STRA)

HSP 1 Score: 225 bits (574), Expect = 2.600e-69
Identity = 139/285 (48.77%), Postives = 177/285 (62.11%), Query Frame = 1
Query:    1 MGQEVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAVLLHLGRLVAPPSTSIQHLSNADAMQTCTLDPSQGAQA---SIDSPNTRL-LTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
            +G EVEEGN+E+KL LVAP   R  HL+TQ++WRLNEG  G A+Y+IG +DDG P GL   +L ASL+TL+ +AA   A++  V        RP     +  R    R     +  AA+ +RVAV+G   AGKSTL+GVLTRG  DNGRGLARMQVFRH+HEV +G TSSIS Q + L L               +A   +   +D S G +A   S   P     L  +DQPGH KYLKTTL+GL GH+ +Y +L + A  G+Q MTREH+AI+LALGVPL +V
Sbjct:   11 LGPEVEEGNIEYKLMLVAPPPERIVHLSTQMNWRLNEGH-GTAVYMIGYTDDGEPTGLAPRELGASLKTLRAIAAAARAEIVTVAR------RP--TTALGDRFAAARELESESEGAARVVRVAVVGQEGAGKSTLVGVLTRGKNDNGRGLARMQVFRHNHEVSDGRTSSISHQPLTLQL---------------DATTGEVLGVDSSNGNRAYELSRSCPTRHCTLALLDQPGHAKYLKTTLFGLAGHAPNYALLAVDAAAGVQPMTREHMAIALALGVPLIIV 271          
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: D7FYC0_ECTSI (GTPBP2, EF1alpha-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYC0_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 1.660e-66
Identity = 143/301 (47.51%), Postives = 185/301 (61.46%), Query Frame = 1
Query:    7 QEVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRC--FCGTVDAA--KGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAVLLHLGRLVA------------------PPSTSIQHLSNADAMQTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
            +E +EGNVE+KL LV P  +R +HL TQ++WRLNEG  G  +Y++G  DDG   G+  +DL AS++TL+ M   V A++  +++     G   +VARV +    VRR   F G    +  +GLR+ V+GH  AGKSTL+ VLT+G  DNGRGLARMQVFRH+HEVFNG TSSISQQ V    G   A                  P   S+    +        LD   G     +   +R+LTFIDQPGHEKYLKTTL G+T  +LDY MLV+   +G+QRMTREHLAI+LAL +P+FVV
Sbjct:  222 EEDDEGNVEYKLKLVNPPLARLEHLFTQMNWRLNEGR-GECMYMLGYEDDGKATGMSPSDLSASIKTLRVMMEAVGAKIANMQVQAGAGGGKLKVARVTV----VRRAALFDGLPPDSERRGLRLGVLGHAGAGKSTLVSVLTKGMSDNGRGLARMQVFRHNHEVFNGQTSSISQQGVSASNGFASAWARKGNGSAGXXXXXXGRPRGYSVDESGHGKRGLRKRLDGG-GLGGEEEDGESRVLTFIDQPGHEKYLKTTLTGMTASALDYSMLVVSGVDGVQRMTREHLAIALALQLPIFVV 516          
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: W4G9Q7_9STRA (Tr-type G domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G9Q7_9STRA)

HSP 1 Score: 222 bits (565), Expect = 4.600e-66
Identity = 139/278 (50.00%), Postives = 171/278 (61.51%), Query Frame = 1
Query:   10 EVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAVLLHLGRLVAPPSTSIQHLSNADAMQTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
            EVE GNVE+KL L+ PT  R QHL TQL+WRLNEG  G A Y +GVSDDG  +G+   DL+ SL TL  M  V+ AQ+  V  +R G     + ARV +       C   T  A K +RV+VIG VD+GKSTLIGVLTRGC+D+G GLARMQVFRH HE+ NG TSSIS+Q     LG            L + +A             +SID+ +T+L+ F D  GH++YLK T  GLT    DY MLV+ AT G+Q MTREHL I L LG+ +FVV
Sbjct:   18 EVEHGNVEYKLQLLNPTAVRFQHLVTQLNWRLNEGH-GYAFYELGVSDDGLVIGMPPEDLETSLNTLFRMCQVLSAQMH-VHTLREGMQHTYKAARVAV------SCIAET-HAKKQVRVSVIGDVDSGKSTLIGVLTRGCLDDGNGLARMQVFRHLHEIENGRTSSISEQI----LGVTKEGKICKFNTLESRNA-------------SSIDAQSTKLIMFSDLAGHQRYLKITASGLTSQFPDYAMLVVDATAGVQSMTREHLRIVLGLGIGVFVV 269          
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: W4GA11_9STRA (Tr-type G domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GA11_9STRA)

HSP 1 Score: 222 bits (565), Expect = 4.480e-65
Identity = 139/278 (50.00%), Postives = 171/278 (61.51%), Query Frame = 1
Query:   10 EVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAVLLHLGRLVAPPSTSIQHLSNADAMQTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
            EVE GNVE+KL L+ PT  R QHL TQL+WRLNEG  G A Y +GVSDDG  +G+   DL+ SL TL  M  V+ AQ+  V  +R G     + ARV +       C   T  A K +RV+VIG VD+GKSTLIGVLTRGC+D+G GLARMQVFRH HE+ NG TSSIS+Q     LG            L + +A             +SID+ +T+L+ F D  GH++YLK T  GLT    DY MLV+ AT G+Q MTREHL I L LG+ +FVV
Sbjct:   18 EVEHGNVEYKLQLLNPTAVRFQHLVTQLNWRLNEGH-GYAFYELGVSDDGLVIGMPPEDLETSLNTLFRMCQVLSAQMH-VHTLREGMQHTYKAARVAV------SCIAET-HAKKQVRVSVIGDVDSGKSTLIGVLTRGCLDDGNGLARMQVFRHLHEIENGRTSSISEQI----LGVTKEGKICKFNTLESRNA-------------SSIDAQSTKLIMFSDLAGHQRYLKITASGLTSQFPDYAMLVVDATAGVQSMTREHLRIVLGLGIGVFVV 269          
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: A0A523TG70_9ARCH (Elongation factor 1-alpha n=1 Tax=Candidatus Heimdallarchaeota archaeon TaxID=2026747 RepID=A0A523TG70_9ARCH)

HSP 1 Score: 220 bits (560), Expect = 1.740e-64
Identity = 133/282 (47.16%), Postives = 182/282 (64.54%), Query Frame = 1
Query:    1 MGQEVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAVLLHL-GRLVAPPSTSIQHLSNADAMQTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
            + +E +EGN+E+KL L+ PT +R +HL TQ+ +RL EG  G AIY IG+ D+G P GL E +LK S++TLK+MA  + A    + ++R  EG  G+VA V +RR+          +    +R+AV+G+VD+GKSTL+GVLT+G +DNGRGLAR+ VFRH HE+  G TSSISQQ +     GR+V   S   Q                  +   I   ++++LTFID  GHEKYLKTTL+GLTGH  DYV+LV+GA  G+  MT+EHL I+LAL VP+ +V
Sbjct:   12 LDKESDEGNIEYKLKLIDPTDTRFEHLVTQMKFRLQEGL-GEAIYEIGIEDNGYPKGLSEKELKLSIETLKKMAKELNAD---ITILREREGEIGKVAEVLVRRLAD--------EDFLEIRIAVVGNVDSGKSTLVGVLTQGKLDNGRGLARVNVFRHKHEIETGRTSSISQQIMGYDSKGRIVNYESLGEQ------------------SWTKIIEGSSKVLTFIDLGGHEKYLKTTLFGLTGHKPDYVLLVVGANMGVVGMTKEHLGIALALKVPIIIV 263          
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: A0A485LBK4_9STRA (Aste57867_18893 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBK4_9STRA)

HSP 1 Score: 218 bits (555), Expect = 9.520e-64
Identity = 133/279 (47.67%), Postives = 174/279 (62.37%), Query Frame = 1
Query:   10 EVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAV-LLHLGRLVAPPSTSIQHLSNADAMQTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
            E+E+GNVE+KL L+ P+  R QHL TQL+WRLNEG  G A Y +GVSDDG  +G+   DL+ SL TL  M  V+ A++  V+ +R G     + ARV + RI           A K +RV+VIG VD+GKSTLIGVLTRGC+D+G GLARMQVFRH HEV NG TSSIS+Q + + + G++    +   ++ SN                  I+  +T+L+ F D  GH++YLK T  GLT    DY MLV+ A  G+Q MTREHL I L LG+ +FVV
Sbjct:    7 EIEQGNVEYKLQLLNPSADRFQHLVTQLNWRLNEGH-GYAYYEVGVSDDGMVMGMPPEDLETSLNTLFRMCQVLSAEMH-VQTLREGSQPTYKAARVAVSRIA-------ETHAKKQVRVSVIGDVDSGKSTLIGVLTRGCLDDGNGLARMQVFRHLHEVENGRTSSISEQILGVTNEGKICKFSTLESRNASN------------------IEVQSTKLIMFSDLAGHQRYLKITASGLTSQFPDYAMLVVDAMSGVQSMTREHLRIVLGLGISVFVV 258          
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: A0A8J8CP21_9ARCH (Elongation factor 1-alpha n=1 Tax=Asgard group archaeon TaxID=2591838 RepID=A0A8J8CP21_9ARCH)

HSP 1 Score: 217 bits (552), Expect = 2.370e-63
Identity = 128/274 (46.72%), Postives = 179/274 (65.33%), Query Frame = 1
Query:   22 GNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAVLLHLGRLVAPPSTSIQHLSNADAMQTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
            GN+E+KL L+ PT +R +HL TQ+ +RL EG  G AIY IG+ D+G P GL E +L+ S++TL++MA  + A    + ++R  +G  G+VA V +RR+               +RVAV G+VD+GKSTL+GVLTRG +DNGRGLAR+ VFRH HE+  G TSSISQQ     LG        S+ ++ N D       D +  + + I   +++++TFID  GHE+YLKTTL+GLTGH  DYV++++GA  G+  MT+EHL I+LAL VP+ VV
Sbjct:   19 GNIEYKLKLIDPTATRFEHLVTQMKFRLQEGQ-GEAIYEIGIEDNGYPKGLSEEELEMSIETLRKMAKKLNAD---ISVLRTRDGESGKVAEVLVRRLAEEEFL--------EIRVAVAGNVDSGKSTLVGVLTRGKLDNGRGLARVNVFRHKHEIETGRTSSISQQI----LGY------DSVGNIVNYD-------DLTLPSWSDIIEASSKVITFIDLGGHERYLKTTLFGLTGHIPDYVLIIVGANMGIVGMTKEHLGIALALKVPIIVV 263          
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: UPI0006451DAC (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006451DAC)

HSP 1 Score: 220 bits (561), Expect = 3.040e-63
Identity = 133/281 (47.33%), Postives = 176/281 (62.63%), Query Frame = 1
Query:    1 MGQEVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAVLLHLGRLVAPPSTSIQHLSNADAMQTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
            +  EVE GN+E+K  LV PT  R +HL +QL WRL EG  G AIY IGV DDG+  GL + D+ AS+ TLK MA+ + A +  +   R   G  G+V  V +R+ T         D    +R+ V+G+VDAGKSTL+GVLTRG +DNGRGLARM +FRH HE+ +G TSSISQ+ V             S  ++ N        ++PS+  + S     ++++TFID  GHEKYLKTTL+G+TGH  DY ML+IGA  G   MT+EHL I+LAL VP++VV
Sbjct:  111 LAPEVEFGNIEYKFKLVNPTDERLEHLVSQLKWRLGEGM-GEAIYEIGVEDDGSATGLSDEDVAASMDTLKRMASRLNADMTTI---RERNGAKGKVLEVLIRKYTS--------DDFSEVRITVVGNVDAGKSTLLGVLTRGQLDNGRGLARMNIFRHKHEIESGRTSSISQEIVGFD----------SKGNVVNYTNNMHSAMNPSEICELS-----SKIITFIDLAGHEKYLKTTLFGMTGHQPDYAMLMIGANMGCVGMTKEHLGIALALRVPVYVV 364          
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: A0A843BZB3_9ARCH (Elongation factor 1-alpha n=1 Tax=Candidatus Heimdallarchaeota archaeon TaxID=2026747 RepID=A0A843BZB3_9ARCH)

HSP 1 Score: 215 bits (548), Expect = 9.030e-63
Identity = 130/282 (46.10%), Postives = 181/282 (64.18%), Query Frame = 1
Query:    1 MGQEVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAVLLHL-GRLVAPPSTSIQHLSNADAMQTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
            + +E EEGN+E+KL L+ P  +R +HL TQ+ +RL EG  G AIY IG+ D+G P GL   +LK S++TLK+MA  + A    + ++R  EG  G VA V +R+           +    +R+AV+G+VD+GKSTL+GVLT+G +DNGRGLAR+ VFRH HE+  G TSSISQQ +     GR+V           N +++        + +   I   ++++LTFID  GHEKYLKTTL+GLTGH  DYV+LV+GA  G+  MT+EHL I+LAL VP+ +V
Sbjct:   12 LDKESEEGNIEYKLKLIDPNATRFEHLVTQMKFRLQEGM-GEAIYEIGIEDNGYPKGLSVKELKLSIETLKKMALELNAD---ITVLREREGEIGTVAEVLIRKFAE--------EDFLEIRIAVVGNVDSGKSTLVGVLTQGKLDNGRGLARVNVFRHKHEIETGRTSSISQQIMGYDSRGRIV-----------NYESLN-------EKSWTKIIEGSSKVLTFIDLGGHEKYLKTTLFGLTGHKPDYVLLVVGANMGVVGMTKEHLGIALALKVPIIIV 263          
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Match: A0A024UKI9_9STRA (Tr-type G domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKI9_9STRA)

HSP 1 Score: 215 bits (547), Expect = 2.090e-62
Identity = 133/279 (47.67%), Postives = 173/279 (62.01%), Query Frame = 1
Query:   10 EVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVSDDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARVHLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRGLARMQVFRHSHEVFNGLTSSISQQAV-LLHLGRLVAPPSTSIQHLSNADAMQTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYVMLVIGATEGMQRMTREHLAISLALGVPLFVV 843
            EVE+GNVE+KL L+ PT  R QHL TQL+WRLNEG  G A Y +GV+DDG  VG+   DL+ SL TL  M  V+ A+++ V  +R G     + ARV + RI           A K +RV+VIG  D+GKSTLIGVLTRGC+D+G GLARMQV RH HE+ +G TSSIS+Q + + + G++    S   ++ S                  SID+ +T+L+ F D  GH++YLK T  GLT    DY MLV+ AT G+Q MT EHL I L LG+ +FVV
Sbjct:   21 EVEQGNVEYKLQLLHPTADRFQHLVTQLNWRLNEGH-GYAFYELGVADDGMVVGMPPHDLETSLNTLCRMCQVLSAEMQ-VHTVRPGTSDTYKAARVAISRIA-------ETHAKKQVRVSVIGDFDSGKSTLIGVLTRGCLDDGNGLARMQVLRHLHEIEDGRTSSISEQILGVTNEGKICKFSSLESRNAS------------------SIDAQSTKLIMFSDLAGHQRYLKITASGLTSQFPDYAMLVVDATTGVQPMTLEHLRIVLGLGIRVFVV 272          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1040.3.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YVP3_9STRA2.600e-6948.77GTP binding protein 2 n=1 Tax=Tribonema minus TaxI... [more]
D7FYC0_ECTSI1.660e-6647.51GTPBP2, EF1alpha-like GTPase n=1 Tax=Ectocarpus si... [more]
W4G9Q7_9STRA4.600e-6650.00Tr-type G domain-containing protein n=1 Tax=Aphano... [more]
W4GA11_9STRA4.480e-6550.00Tr-type G domain-containing protein n=1 Tax=Aphano... [more]
A0A523TG70_9ARCH1.740e-6447.16Elongation factor 1-alpha n=1 Tax=Candidatus Heimd... [more]
A0A485LBK4_9STRA9.520e-6447.67Aste57867_18893 protein n=1 Tax=Aphanomyces stella... [more]
A0A8J8CP21_9ARCH2.370e-6346.72Elongation factor 1-alpha n=1 Tax=Asgard group arc... [more]
UPI0006451DAC3.040e-6347.33hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A843BZB3_9ARCH9.030e-6346.10Elongation factor 1-alpha n=1 Tax=Candidatus Heimd... [more]
A0A024UKI9_9STRA2.090e-6247.67Tr-type G domain-containing protein n=2 Tax=Aphano... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1040contigC-australica_Contig_1040:2992..4830 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FYC0
PFAMsGTP_EFTU,GTP_EFTU_D3
Model size843
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons8
Evalue2.72e-67
EggNOG OGsCOG5258@1|root,KOG0463@2759|Eukaryota
DescriptionGTP metabolic process
Cds size843
COG categoryJ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1040.3.5prot_C-australica_Contig_1040.3.5Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1040 2992..4830 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586778.2182207-CDS-C-australica_Contig_1040:2991..31331682586778.2182207-CDS-C-australica_Contig_1040:2991..3133Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1040 2992..3133 +
1682586778.2296374-CDS-C-australica_Contig_1040:3227..34291682586778.2296374-CDS-C-australica_Contig_1040:3227..3429Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1040 3228..3429 +
1682586778.2391663-CDS-C-australica_Contig_1040:3578..36601682586778.2391663-CDS-C-australica_Contig_1040:3578..3660Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1040 3579..3660 +
1682586778.2480094-CDS-C-australica_Contig_1040:3762..38221682586778.2480094-CDS-C-australica_Contig_1040:3762..3822Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1040 3763..3822 +
1682586778.2640152-CDS-C-australica_Contig_1040:4007..40991682586778.2640152-CDS-C-australica_Contig_1040:4007..4099Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1040 4008..4099 +
1682586778.272296-CDS-C-australica_Contig_1040:4302..44121682586778.272296-CDS-C-australica_Contig_1040:4302..4412Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1040 4303..4412 +
1682586778.2807312-CDS-C-australica_Contig_1040:4599..46941682586778.2807312-CDS-C-australica_Contig_1040:4599..4694Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1040 4600..4694 +
1682586778.2888496-CDS-C-australica_Contig_1040:4770..48301682586778.2888496-CDS-C-australica_Contig_1040:4770..4830Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1040 4771..4830 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1040.3.5

>prot_C-australica_Contig_1040.3.5 ID=prot_C-australica_Contig_1040.3.5|Name=mRNA_C-australica_Contig_1040.3.5|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=281bp
MGQEVEEGNVEHKLHLVAPTCSRKQHLATQLHWRLNEGDDGVAIYLIGVS
DDGTPVGLCEADLKASLQTLKEMAAVVLAQLERVELMRAGEGRPGRVARV
HLRRITVRRCFCGTVDAAKGLRVAVIGHVDAGKSTLIGVLTRGCVDNGRG
LARMQVFRHSHEVFNGLTSSISQQAVLLHLGRLVAPPSTSIQHLSNADAM
QTCTLDPSQGAQASIDSPNTRLLTFIDQPGHEKYLKTTLYGLTGHSLDYV
MLVIGATEGMQRMTREHLAISLALGVPLFVV
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mRNA from alignment at C-australica_Contig_1040:2992..4830+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1040.3.5 ID=mRNA_C-australica_Contig_1040.3.5|Name=mRNA_C-australica_Contig_1040.3.5|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1839bp|location=Sequence derived from alignment at C-australica_Contig_1040:2992..4830+ (Chrysoparadoxa australica CS_1217)
ATGGGACAGGAGGTGGAGGAGGGCAACGTCGAGCACAAGCTGCACCTGGT GGCTCCCACTTGCTCTCGCAAGCAGCACCTGGCGACTCAGCTGCACTGGA GACTGAACGAGGGGGATGACGGAGTTGCCATTTACTTGATAGGTGAGCAG TAGAGGAACGACAGACCTCCACCGGTAGCTATCCACCATCTTTTGCACAC CCTCTAAGCCCTCAGCTCTTTGCGGTACCAACCTAGGTGTCTCTGATGAT GGCACCCCGGTGGGTCTCTGTGAGGCTGACTTGAAGGCCTCGCTGCAAAC GTTGAAGGAGATGGCCGCTGTAGTCCTGGCTCAGTTGGAGCGCGTTGAAT TGATGAGGGCTGGGGAGGGTAGGCCAGGGAGGGTGGCTCGCGTGCACCTC AGGAGAATAACGGTGAGGAGATGTTTCTGTGGTACTGTGTCCTTTCCTTA CCTTGCCTTAGGTTCCTGTTGTAATTCAATTTAAAGTGCATGGAGCTGCA TGTGCATTGCTGCCAGAGCTGACACGTTCTCATGTGTACCACACTGCCTC TCCAGCCACCTGGTGAAGCGGACACGCCACATGACAGTGATGCTGCCAAG GGCCTCCGCGTTGCTGTCATTGGCCACGTTGATGCGGGGAAATCCACTCT TATCGGGGTGCTAACCAGGGTATGTTGGCTTGCTCCCACTCATCAGGCTC AGCCTATGCCTCGCCTCATGACTCCATCTCCATCTTTTGCTTTGTTTGCT TACTCCTATCCCATTCGATAGGGCTGTGTTGATAATGGTCGTGGTTTGGC TCGGATGCAAGTGTTTCGCCACAGTCATGAGGTAACCGTAACCGTAACAA ATGTCAATCCCTCCACGATACTACGCTCCAACATCACTTCACTTGGTCTA AAGCAAGCACTGCACGTGACATGTGACATGTGACATGTTTTTTTATAGTT GTTTGTAATGCTTCATGCGGATTATTCAAATGCATCTTGCTGCCATTTAT CAATGCTATTTGCTAGGTCTTCAATGGGCTGACTAGCAGTATCTCCCAGC AAGCAGTGCTGCTGCACCTTGGCAGGTTAGTGGCCCCACCCAGTACTAGT ATCCAGCAGTGCAATATAATGGTACCCTGAGGGTCTTGCAGCCAGCTGTT TTGAGTACTTGGCAGTGATGCGCTAGTCTTGTTCACCTGTTGGTCCAGCT CTGCTTTACTTGAACACTTAAGCACGGTAATGCATTGACACAATAGGTAG GCTCCTTTAACTTTAAACCTCTAAACCTCTATACCTTGAACAGCACTGGC CGTGTTCGGAGCTTGAGCAATGCTGATGCCATGCAGACTTGTACACTGGA CCCATCACAAGGAGCACAGGCGTCCATTGACAGCCCCAACACCCGACTGC TTACCTTTATTGATCAGCCAGGTTAGTTTTTGTTGCCCAGTCAACAGCAA CGATGAAGGAGGGGAGGGGAGGGACAAGATGCGAAATATGAACTTAAGTG TATGGTGCAGCAGTAGATACAAAAGATATTGCAGGCAGGCAGGCAGGCAG GCCTTCTAGTATGCCAGTGCCTGTTGCAAGTGACAATTGACAATCGGTTT ATTCTCAGGCCATGAGAAGTACCTCAAGACCACGCTTTACGGCCTAACTG GTCATTCCTTGGACTACGTAATGCTTGTTATTGGTGCAACAGAAGGGATG CAGGTCTGTCCATGCAAACAGCTCCCTCTCATCTCATCTGAAGAATGATA ATGACGTGTACTCTAACCTTTACCCTCAGAGAATGACACGTGAGCACCTC GCTATCAGCTTAGCTCTTGGGGTGCCTTTGTTTGTTGTT
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Coding sequence (CDS) from alignment at C-australica_Contig_1040:2992..4830+

>mRNA_C-australica_Contig_1040.3.5 ID=mRNA_C-australica_Contig_1040.3.5|Name=mRNA_C-australica_Contig_1040.3.5|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=843bp|location=Sequence derived from alignment at C-australica_Contig_1040:2992..4830+ (Chrysoparadoxa australica CS_1217)
ATGGGACAGGAGGTGGAGGAGGGCAACGTCGAGCACAAGCTGCACCTGGT
GGCTCCCACTTGCTCTCGCAAGCAGCACCTGGCGACTCAGCTGCACTGGA
GACTGAACGAGGGGGATGACGGAGTTGCCATTTACTTGATAGGTGTCTCT
GATGATGGCACCCCGGTGGGTCTCTGTGAGGCTGACTTGAAGGCCTCGCT
GCAAACGTTGAAGGAGATGGCCGCTGTAGTCCTGGCTCAGTTGGAGCGCG
TTGAATTGATGAGGGCTGGGGAGGGTAGGCCAGGGAGGGTGGCTCGCGTG
CACCTCAGGAGAATAACGGTGAGGAGATGTTTCTGTGGTACTGTTGATGC
TGCCAAGGGCCTCCGCGTTGCTGTCATTGGCCACGTTGATGCGGGGAAAT
CCACTCTTATCGGGGTGCTAACCAGGGGCTGTGTTGATAATGGTCGTGGT
TTGGCTCGGATGCAAGTGTTTCGCCACAGTCATGAGGTCTTCAATGGGCT
GACTAGCAGTATCTCCCAGCAAGCAGTGCTGCTGCACCTTGGCAGGTTAG
TGGCCCCACCCAGTACTAGTATCCAGCACTTGAGCAATGCTGATGCCATG
CAGACTTGTACACTGGACCCATCACAAGGAGCACAGGCGTCCATTGACAG
CCCCAACACCCGACTGCTTACCTTTATTGATCAGCCAGGCCATGAGAAGT
ACCTCAAGACCACGCTTTACGGCCTAACTGGTCATTCCTTGGACTACGTA
ATGCTTGTTATTGGTGCAACAGAAGGGATGCAGAGAATGACACGTGAGCA
CCTCGCTATCAGCTTAGCTCTTGGGGTGCCTTTGTTTGTTGTT
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