mRNA_C-australica_Contig_10399.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10399.1.1
Unique NamemRNA_C-australica_Contig_10399.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10399.1.1 vs. uniprot
Match: A0A7X2FTZ1_9PROT (Aminotransferase class V-fold PLP-dependent enzyme n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2FTZ1_9PROT)

HSP 1 Score: 367 bits (941), Expect = 5.830e-124
Identity = 174/255 (68.24%), Postives = 205/255 (80.39%), Query Frame = 1
Query:    4 GAVSIPALEELIDDRGKLISVTHIPTNGGLVNPAAEIGRVARQAGIPFLLDSCQTVGQMPVDVQEIGCDILTATGRKYLRGPRGTGFLYVSGAMLDSLEPPMIDHHAADWVAADRYQLRPDARRFENWENNVAGLLGLGAAIDYTLELGQQAIWERIRDLAGELRASLSSLDGVTVQDLGHEKCGIVTFDIAGADHMALKTALRAENINITVSDRSSTRLDMEERGFENLVRASVHCYNTSEEVSRFCAAIDRLR 768
            GA+S+ AL  +I  R KLIS+TH+PTNGGLVNPA EIG++A+ AGIP+LLD+CQ VGQ+P+DV  IGCDILTAT RKYLRGPRG GFLYV  ++L +LEPPM+DHHAA WVAA  Y++RPDARRFENWENN+AG LGLGAA+DYTL LGQ AIWERI+ LA  LR  L  + GVT++DLG   CGIVTF + G D   LKT LRAE INITVSD +STRLDME RG   L RASVHCYNT +E+ +FC A+DRL+
Sbjct:  136 GALSVEALAGMISKRTKLISITHVPTNGGLVNPAEEIGKLAKAAGIPYLLDACQAVGQLPIDVDRIGCDILTATSRKYLRGPRGAGFLYVRDSLLQTLEPPMLDHHAAPWVAAGEYRVRPDARRFENWENNIAGQLGLGAAVDYTLALGQDAIWERIQHLATRLRQRLGDITGVTIRDLGPNPCGIVTFTLDGTDLPKLKTDLRAEQINITVSDAASTRLDMEARGLAKLGRASVHCYNTEDEIEQFCTAVDRLK 390          
BLAST of mRNA_C-australica_Contig_10399.1.1 vs. uniprot
Match: A0A848LXD0_9DELT (Aminotransferase class V-fold PLP-dependent enzyme n=3 Tax=Pyxidicoccus TaxID=224458 RepID=A0A848LXD0_9DELT)

HSP 1 Score: 341 bits (875), Expect = 6.790e-114
Identity = 166/256 (64.84%), Postives = 199/256 (77.73%), Query Frame = 1
Query:    4 GAVSIPALEELIDDRGKLISVTHIPTNGGLVNPAAEIGRVARQAGIPFLLDSCQTVGQMPVDVQEIGCDILTATGRKYLRGPRGTGFLYVSGAMLDSLEPPMIDHHAADWVAADRYQLRPDARRFENWENNVAGLLGLGAAIDYTLELGQQAIWERIRDLAGELRASLSSLDGVTVQDLGHEKCGIVTFDIAGADHMALKTALRAENINITVSDRSSTRLDMEERGFENLVRASVHCYNTSEEVSRFCAAIDRLRS 771
            G +SI ALE ++D R +LISVTHIPTNGGLVNPAA IGRVAR+AG+PFLLD+CQTVGQ+PVDV+ +GCD+L+ATGRK+LR PRGTGFLYV  A+L+ LEPPM+DHHAA W + + Y LRPDARRFENWENN+A  LGLG A+DY L  G  AIWER+R LA  LRA L+ L GVTV+D+G  KCGIVTF + G    AL+  L A+ IN++V+ R STRLDME RG   +VRASVH YNT EE+ R   A+ R  S
Sbjct:  139 GQLSISALESMMDSRVRLISVTHIPTNGGLVNPAAAIGRVARRAGVPFLLDACQTVGQLPVDVEALGCDLLSATGRKFLRAPRGTGFLYVRKALLERLEPPMLDHHAAPWTSVEGYTLRPDARRFENWENNIAAKLGLGVAVDYALGWGLDAIWERVRGLAERLRARLADLPGVTVRDVGEVKCGIVTFTVEGQSPDALRQQLLAQGINVSVTRRPSTRLDMEARGLGEMVRASVHYYNTEEELERLVDAVVRTSS 394          
BLAST of mRNA_C-australica_Contig_10399.1.1 vs. uniprot
Match: A9G8X4_SORC5 (Probable class-V aminotransferase n=6 Tax=Sorangium cellulosum TaxID=56 RepID=A9G8X4_SORC5)

HSP 1 Score: 337 bits (864), Expect = 2.770e-112
Identity = 164/252 (65.08%), Postives = 200/252 (79.37%), Query Frame = 1
Query:    1 RGAVSIPALEELIDDRGKLISVTHIPTNGGLVNPAAEIGRVARQAGIPFLLDSCQTVGQMPVDVQEIGCDILTATGRKYLRGPRGTGFLYVSGAMLDSLEPPMIDHHAADWVAADRYQLRPDARRFENWENNVAGLLGLGAAIDYTLELGQQAIWERIRDLAGELRASLSSLDGVTVQDLGHEKCGIVTFDIAGADHMALKTALRAENINITVSDRSSTRLDMEERGFENLVRASVHCYNTSEEVSRFCAAI 756
            RGAVS+PAL+ L+D+R KLI++TH+PTNGGLVNPA EIGR AR AG+PFLLD+CQ+VGQ+P+DV+ IGCD+L+ATGRKYLRGPRGTGFLYV  A+LD LEPP +D HAA W A DRY+LRPDARRFENWE+ VAG LGLGAA +Y L LG  AI +R+  LA  LRA LS + GVTV+DLG ++CGIVTF  AG D  A+K  L A+ I+++VS  + T LD E+RG  +LVRASVH YN   E+ RF AA+
Sbjct:  136 RGAVSLPALDRLLDERVKLIAITHVPTNGGLVNPAEEIGRRARSAGVPFLLDACQSVGQLPIDVEAIGCDLLSATGRKYLRGPRGTGFLYVRRALLDRLEPPFLDLHAARWTAPDRYELRPDARRFENWESYVAGRLGLGAAAEYALRLGLPAIRDRVGALAERLRARLSEIPGVTVRDLGEQRCGIVTFTRAGEDATAIKERLAAQAIHVSVSTAAGTLLDFEDRGIPDLVRASVHYYNDESEIDRFVAAL 387          
BLAST of mRNA_C-australica_Contig_10399.1.1 vs. uniprot
Match: A0A537LWG9_9BACT (Aminotransferase class V-fold PLP-dependent enzyme n=1 Tax=Terrabacteria group bacterium ANGP1 TaxID=2569760 RepID=A0A537LWG9_9BACT)

HSP 1 Score: 330 bits (847), Expect = 1.080e-109
Identity = 161/255 (63.14%), Postives = 194/255 (76.08%), Query Frame = 1
Query:    4 GAVSIPALEELIDDRGKLISVTHIPTNGGLVNPAAEIGRVARQAGIPFLLDSCQTVGQMPVDVQEIGCDILTATGRKYLRGPRGTGFLYVSGAMLDSLEPPMIDHHAADWVAADRYQLRPDARRFENWENNVAGLLGLGAAIDYTLELGQQAIWERIRDLAGELRASLSSLDGVTVQDLGHEKCGIVTFDIAGADHMALKTALRAENINITVSDRSSTRLDMEERGFENLVRASVHCYNTSEEVSRFCAAIDRLR 768
            G +SI AL   IDDR KLI++TH+PTNGGLVNPAA +GRVAR AGIP+LLD+CQ+VGQMP+DV+ IGC +L+ATGRKYLRGPR TGFLYV  A+L  LEPP++D HAA WVAADRY++RPDARRFENWE N AG + LG A+DY L +G + I +R+  LAG LR  L++  GV V DLG E+CGIVTF +AG +  A++  LR + INI+ S R STRLDME RG   L RASVH YNT EEV RF  A+   R
Sbjct:  137 GQISIDALRGAIDDRVKLIALTHVPTNGGLVNPAAAVGRVARDAGIPYLLDACQSVGQMPMDVEAIGCGLLSATGRKYLRGPRATGFLYVRRALLGRLEPPLLDIHAATWVAADRYEMRPDARRFENWETNAAGKIALGVAVDYALGVGLEPIRDRVYLLAGSLRERLNATPGVRVHDLGAERCGIVTFTVAGVEAEAVRERLRRQRINISASSRGSTRLDMEARGLSTLARASVHYYNTEEEVDRFVRAVASFR 391          
BLAST of mRNA_C-australica_Contig_10399.1.1 vs. uniprot
Match: A0A150RUG8_SORCE (Aminotransferase class V n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150RUG8_SORCE)

HSP 1 Score: 327 bits (838), Expect = 2.410e-108
Identity = 161/251 (64.14%), Postives = 195/251 (77.69%), Query Frame = 1
Query:    4 GAVSIPALEELIDDRGKLISVTHIPTNGGLVNPAAEIGRVARQAGIPFLLDSCQTVGQMPVDVQEIGCDILTATGRKYLRGPRGTGFLYVSGAMLDSLEPPMIDHHAADWVAADRYQLRPDARRFENWENNVAGLLGLGAAIDYTLELGQQAIWERIRDLAGELRASLSSLDGVTVQDLGHEKCGIVTFDIAGADHMALKTALRAENINITVSDRSSTRLDMEERGFENLVRASVHCYNTSEEVSRFCAAI 756
            GAVS+  L+ L+D+R KLI++TH+PTNGGLVNPA  IGR AR AG+PFLLD+CQ+VGQMPVDV+ IGCD+L+ATGRKYLRGPRGTGFLYV  A+L+ LEPP +D HAA W A DRY++RPDARRFE WE  +AG LGLGAAIDY L LG  AI +R+  LA  LRA L+ L GVTV+D+G E+CGIVTF  AG D  A+K  L A+ I+++VS  + T LD E RG  +LVRASVHCYN   E+ RF AA+
Sbjct:  137 GAVSLSELDRLLDERVKLIAITHVPTNGGLVNPAEAIGRRARAAGVPFLLDACQSVGQMPVDVEAIGCDMLSATGRKYLRGPRGTGFLYVRRALLERLEPPFLDLHAARWTAPDRYEVRPDARRFETWEGYIAGRLGLGAAIDYALGLGLPAIRDRVVALAERLRARLAELPGVTVRDVGAERCGIVTFTRAGEDAAAIKARLGAQAIHVSVSTAAGTLLDFEARGIPDLVRASVHCYNDESEIDRFVAAL 387          
BLAST of mRNA_C-australica_Contig_10399.1.1 vs. uniprot
Match: A0A3M1VTL8_9BACT (Aminotransferase class V-fold PLP-dependent enzyme n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M1VTL8_9BACT)

HSP 1 Score: 325 bits (834), Expect = 1.000e-107
Identity = 153/251 (60.96%), Postives = 191/251 (76.10%), Query Frame = 1
Query:    4 GAVSIPALEELIDDRGKLISVTHIPTNGGLVNPAAEIGRVARQAGIPFLLDSCQTVGQMPVDVQEIGCDILTATGRKYLRGPRGTGFLYVSGAMLDSLEPPMIDHHAADWVAADRYQLRPDARRFENWENNVAGLLGLGAAIDYTLELGQQAIWERIRDLAGELRASLSSLDGVTVQDLGHEKCGIVTFDIAGADHMALKTALRAENINITVSDRSSTRLDMEERGFENLVRASVHCYNTSEEVSRFCAAI 756
            G +S+ AL + ID+R KLI++TH+PTNGGLVNPAA +GRVAR+AGI +LLD+CQ++GQMP+DV  IGCDIL+ATGRK+LRGPRGTGFLYV   +L  LEPP +D HAA W A DRY++RPDARRFE+WE N AG +GLG AIDY L  G +AIW R+ DLA  LR  L  + GVT++DLG   CGIV+F + G D   ++  L    IN++VS +SSTRLDME RG  +LVRASVH YN+  E+ RFCA +
Sbjct:  137 GQISVTALRQAIDERVKLIAITHVPTNGGLVNPAAAVGRVAREAGILYLLDACQSIGQMPIDVNAIGCDILSATGRKFLRGPRGTGFLYVRREVLHRLEPPFLDLHAAQWTARDRYEIRPDARRFESWEANYAGHIGLGVAIDYALGWGLEAIWARVTDLAATLRRQLEDIPGVTIRDLGTTLCGIVSFTVDGRDAETIRKQLARHRINVSVSQQSSTRLDMEARGLSDLVRASVHYYNSENEIERFCATL 387          
BLAST of mRNA_C-australica_Contig_10399.1.1 vs. uniprot
Match: UPI001A967BC7 (aminotransferase class V-fold PLP-dependent enzyme n=1 Tax=Arenibaculum pallidiluteum TaxID=2812559 RepID=UPI001A967BC7)

HSP 1 Score: 325 bits (832), Expect = 2.010e-107
Identity = 161/251 (64.14%), Postives = 193/251 (76.89%), Query Frame = 1
Query:    4 GAVSIPALEELIDDRGKLISVTHIPTNGGLVNPAAEIGRVARQAGIPFLLDSCQTVGQMPVDVQEIGCDILTATGRKYLRGPRGTGFLYVSGAMLDSLEPPMIDHHAADWVAADRYQLRPDARRFENWENNVAGLLGLGAAIDYTLELGQQAIWERIRDLAGELRASLSSLDGVTVQDLGHEKCGIVTFDIAGADHMALKTALRAENINITVSDRSSTRLDMEERGFENLVRASVHCYNTSEEVSRFCAAI 756
            GA+S+ AL  +ID+R KLI+VTH+PTNGGLVNPAAEIG VAR AGIP+LLD+CQ+VGQMPVDV+ IGCD+L+ATGRKYLRGPRGTGFLYV   +++ LEPP +D HAA W A DRY++RPDARRFENWE+ V G +GLG A DY L  G   I  R+ +LA  LRA L++L GV V DLG  +CGIV F  AG    A+K  LRA  IN++V+   STRLDME RG E+LVRASVH YNT EE+ RFC A+
Sbjct:  137 GALSVEALSGMIDERVKLIAVTHVPTNGGLVNPAAEIGAVARAAGIPYLLDACQSVGQMPVDVEAIGCDMLSATGRKYLRGPRGTGFLYVRRGLIERLEPPFLDLHAASWTAPDRYEIRPDARRFENWESFVGGRIGLGVAADYALSWGLDRIAARVGELAEGLRARLAALPGVRVADLGVRRCGIVAFAPAGEAPEAVKERLRARGINVSVTRVGSTRLDMEARGIESLVRASVHYYNTEEELDRFCRAL 387          
BLAST of mRNA_C-australica_Contig_10399.1.1 vs. uniprot
Match: D6TJM2_9CHLR (Aminotransferase class V n=4 Tax=Ktedonobacter TaxID=363276 RepID=D6TJM2_9CHLR)

HSP 1 Score: 325 bits (832), Expect = 2.440e-107
Identity = 153/257 (59.53%), Postives = 190/257 (73.93%), Query Frame = 1
Query:    4 GAVSIPALEELIDDRGKLISVTHIPTNGGLVNPAAEIGRVARQAGIPFLLDSCQTVGQMPVDVQEIGCDILTATGRKYLRGPRGTGFLYVSGAMLDSLEPPMIDHHAADWVAADRYQLRPDARRFENWENNVAGLLGLGAAIDYTLELGQQAIWERIRDLAGELRASLSSLDGVTVQDLGHEKCGIVTFDIAGADHMALKTALRAENINITVSDRSSTRLDMEERGFENLVRASVHCYNTSEEVSRFCAAIDRLRSA 774
            G V + AL+ ++D+R KLISVTH+PTNGGLVNP   IG++ARQ  IPFL+D+CQ+VGQMP+DV++IGCD+L+ATGRKYLRGPRGTGFLYV  A L+ LEPPM+D HAA W   D Y++RPDARRFENWE NVAG +GLG A+DY L  G + IW  ++ LA +LR  LS + GV V D G  +CGIVTF I G     +K  L  E IN+++SD +ST LDME R    +VRAS+H YNT EE+ RFC  IDR+  A
Sbjct:  139 GQVDVKALQSMLDERVKLISVTHVPTNGGLVNPVQAIGKLARQHAIPFLVDACQSVGQMPIDVEQIGCDMLSATGRKYLRGPRGTGFLYVRRAFLEQLEPPMLDLHAATWTTQDSYEMRPDARRFENWEGNVAGRIGLGVAVDYALNWGLENIWRHLKALAYQLRTQLSPIPGVIVHDRGVNQCGIVTFTIEGITPEEIKRQLTTEKINVSISDYNSTLLDMESRHLNKMVRASLHYYNTEEEIERFCKHIDRMAEA 395          
BLAST of mRNA_C-australica_Contig_10399.1.1 vs. uniprot
Match: UPI0016890DFC (aminotransferase class V-fold PLP-dependent enzyme n=1 Tax=Leptolyngbya sp. FACHB-261 TaxID=2692806 RepID=UPI0016890DFC)

HSP 1 Score: 323 bits (829), Expect = 5.740e-107
Identity = 153/255 (60.00%), Postives = 192/255 (75.29%), Query Frame = 1
Query:    1 RGAVSIPALEELIDDRGKLISVTHIPTNGGLVNPAAEIGRVARQAGIPFLLDSCQTVGQMPVDVQEIGCDILTATGRKYLRGPRGTGFLYVSGAMLDSLEPPMIDHHAADWVAADRYQLRPDARRFENWENNVAGLLGLGAAIDYTLELGQQAIWERIRDLAGELRASLSSLDGVTVQDLGHEKCGIVTFDIAGADHMALKTALRAENINITVSDRSSTRLDMEERGFENLVRASVHCYNTSEEVSRFCAAIDRL 765
            +G +S+ AL  ++D+R KLI++TH+PTNGGLVNPAA +G +AR+AG+ +LLD+CQ +GQ+P+DV  IGCD L+ATGRKYLRGPRGTG LYV   +++ LEPP +D HAA+WVA++RY+LRPDARRFENWE N AG +GLG AIDY L  G    W+RI  LA  LRA L+ L GVTVQDLG E+CGIVTF  A     A+K AL A NIN++VS    TRLDM+ RG  NLVRASVH YN+  EV +FC  +  +
Sbjct:  136 QGQLSVEALRNMLDERVKLIAITHVPTNGGLVNPAAAVGAIAREAGVFYLLDACQALGQLPIDVNAIGCDFLSATGRKYLRGPRGTGLLYVRRDLIEQLEPPFLDLHAAEWVASERYELRPDARRFENWETNYAGKIGLGVAIDYALAWGLDNTWQRIATLAESLRAQLTELPGVTVQDLGQERCGIVTFTAASLSPEAIKQALTAYNINVSVSPLVYTRLDMQARGLNNLVRASVHYYNSEAEVQQFCETLAEI 390          
BLAST of mRNA_C-australica_Contig_10399.1.1 vs. uniprot
Match: A0A2E4XT07_9PROT (Aminotransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XT07_9PROT)

HSP 1 Score: 323 bits (827), Expect = 1.350e-106
Identity = 160/251 (63.75%), Postives = 192/251 (76.49%), Query Frame = 1
Query:    4 GAVSIPALEELIDDRGKLISVTHIPTNGGLVNPAAEIGRVARQAGIPFLLDSCQTVGQMPVDVQEIGCDILTATGRKYLRGPRGTGFLYVSGAMLDSLEPPMIDHHAADWVAADRYQLRPDARRFENWENNVAGLLGLGAAIDYTLELGQQAIWERIRDLAGELRASLSSLDGVTVQDLGHEKCGIVTFDIAGADHMALKTALRAENINITVSDRSSTRLDMEERGFENLVRASVHCYNTSEEVSRFCAAI 756
            G V   ALE++ID+R KLIS+THIPTNGGLVNPAAEIGR+A   GI +LLD+CQ+VGQ+PV+V EIGCDIL+ATGRKYLRGPRGTGFLYV   +L++LEPPMID  AA WVA DRY+LRPDARRFENWENN A  LGLG A+DY L+LG + IW+RI DL+  LRA LS +DGV ++D+G  + GIVTF + G D MA+K AL  + IN++VS  +ST LD   R    +VRASVH YN   EV R   AI
Sbjct:  137 GDVDTRALEDMIDERVKLISITHIPTNGGLVNPAAEIGRIANAHGITYLLDACQSVGQLPVNVGEIGCDILSATGRKYLRGPRGTGFLYVRKGLLETLEPPMIDLFAAKWVAPDRYELRPDARRFENWENNYAARLGLGVAVDYALDLGLETIWQRILDLSSNLRARLSEVDGVELRDIGTVQGGIVTFTLDGVDSMAIKEALSGQGINVSVSHPASTLLDATRRNLPPVVRASVHYYNAETEVERLAEAI 387          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10399.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X2FTZ1_9PROT5.830e-12468.24Aminotransferase class V-fold PLP-dependent enzyme... [more]
A0A848LXD0_9DELT6.790e-11464.84Aminotransferase class V-fold PLP-dependent enzyme... [more]
A9G8X4_SORC52.770e-11265.08Probable class-V aminotransferase n=6 Tax=Sorangiu... [more]
A0A537LWG9_9BACT1.080e-10963.14Aminotransferase class V-fold PLP-dependent enzyme... [more]
A0A150RUG8_SORCE2.410e-10864.14Aminotransferase class V n=1 Tax=Sorangium cellulo... [more]
A0A3M1VTL8_9BACT1.000e-10760.96Aminotransferase class V-fold PLP-dependent enzyme... [more]
UPI001A967BC72.010e-10764.14aminotransferase class V-fold PLP-dependent enzyme... [more]
D6TJM2_9CHLR2.440e-10759.53Aminotransferase class V n=4 Tax=Ktedonobacter Tax... [more]
UPI0016890DFC5.740e-10760.00aminotransferase class V-fold PLP-dependent enzyme... [more]
A0A2E4XT07_9PROT1.350e-10663.75Aminotransferase n=1 Tax=Rhodospirillaceae bacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10399contigC-australica_Contig_10399:46..822 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog448385.sce8911
PFAMsAminotran_5
Model size777
Max annot lvl28221|Deltaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.54e-113
EggNOG OGsCOG0520@1|root,COG0520@2|Bacteria,1MUPD@1224|Proteobacteria,42PJT@68525|delta/epsilon subdivisions,2WKPW@28221|Deltaproteobacteria,2YXCR@29|Myxococcales
DescriptionCatalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
Cds size777
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586776.2809348-CDS-C-australica_Contig_10399:45..8221682586776.2809348-CDS-C-australica_Contig_10399:45..822Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10399 46..822 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10399.1.1prot_C-australica_Contig_10399.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10399 46..822 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10399.1.1

>prot_C-australica_Contig_10399.1.1 ID=prot_C-australica_Contig_10399.1.1|Name=mRNA_C-australica_Contig_10399.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=259bp
RGAVSIPALEELIDDRGKLISVTHIPTNGGLVNPAAEIGRVARQAGIPFL
LDSCQTVGQMPVDVQEIGCDILTATGRKYLRGPRGTGFLYVSGAMLDSLE
PPMIDHHAADWVAADRYQLRPDARRFENWENNVAGLLGLGAAIDYTLELG
QQAIWERIRDLAGELRASLSSLDGVTVQDLGHEKCGIVTFDIAGADHMAL
KTALRAENINITVSDRSSTRLDMEERGFENLVRASVHCYNTSEEVSRFCA
AIDRLRSA*
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mRNA from alignment at C-australica_Contig_10399:46..822-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10399.1.1 ID=mRNA_C-australica_Contig_10399.1.1|Name=mRNA_C-australica_Contig_10399.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=777bp|location=Sequence derived from alignment at C-australica_Contig_10399:46..822- (Chrysoparadoxa australica CS_1217)
CGCGGCGCGGTCTCCATCCCGGCGCTGGAGGAACTCATCGACGACCGGGG TAAGCTGATCTCGGTTACCCATATCCCGACCAATGGCGGGCTGGTGAACC CGGCGGCGGAAATCGGCCGCGTTGCCAGGCAGGCCGGCATCCCCTTCCTG CTCGACAGCTGCCAGACCGTCGGCCAGATGCCGGTCGACGTGCAGGAGAT CGGTTGCGACATCCTTACCGCGACGGGCCGGAAATATCTCCGGGGGCCGC GCGGCACGGGCTTCCTCTATGTTTCCGGGGCCATGCTCGACAGCCTCGAG CCGCCGATGATCGACCATCACGCGGCGGACTGGGTGGCGGCGGACCGTTA CCAGCTTCGCCCCGACGCCCGCCGGTTCGAGAACTGGGAGAACAATGTCG CCGGTCTGCTCGGCCTTGGTGCCGCTATCGACTACACGCTCGAACTCGGC CAGCAGGCGATCTGGGAGCGCATCCGCGATCTCGCCGGGGAACTCAGGGC GAGCCTGTCCTCGCTCGACGGCGTCACGGTGCAGGATCTCGGCCACGAGA AATGCGGCATCGTCACCTTCGATATTGCCGGTGCGGACCATATGGCGCTG AAGACGGCGCTGAGGGCGGAGAATATCAACATCACCGTCTCCGACCGATC CTCGACCCGGCTGGACATGGAGGAACGCGGCTTCGAGAACCTCGTGCGGG CCTCGGTGCATTGCTACAACACGTCGGAAGAGGTCAGCCGGTTCTGTGCC GCTATCGACCGGCTGAGAAGCGCCTGA
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Coding sequence (CDS) from alignment at C-australica_Contig_10399:46..822-

>mRNA_C-australica_Contig_10399.1.1 ID=mRNA_C-australica_Contig_10399.1.1|Name=mRNA_C-australica_Contig_10399.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=777bp|location=Sequence derived from alignment at C-australica_Contig_10399:46..822- (Chrysoparadoxa australica CS_1217)
CGCGGCGCGGTCTCCATCCCGGCGCTGGAGGAACTCATCGACGACCGGGG
TAAGCTGATCTCGGTTACCCATATCCCGACCAATGGCGGGCTGGTGAACC
CGGCGGCGGAAATCGGCCGCGTTGCCAGGCAGGCCGGCATCCCCTTCCTG
CTCGACAGCTGCCAGACCGTCGGCCAGATGCCGGTCGACGTGCAGGAGAT
CGGTTGCGACATCCTTACCGCGACGGGCCGGAAATATCTCCGGGGGCCGC
GCGGCACGGGCTTCCTCTATGTTTCCGGGGCCATGCTCGACAGCCTCGAG
CCGCCGATGATCGACCATCACGCGGCGGACTGGGTGGCGGCGGACCGTTA
CCAGCTTCGCCCCGACGCCCGCCGGTTCGAGAACTGGGAGAACAATGTCG
CCGGTCTGCTCGGCCTTGGTGCCGCTATCGACTACACGCTCGAACTCGGC
CAGCAGGCGATCTGGGAGCGCATCCGCGATCTCGCCGGGGAACTCAGGGC
GAGCCTGTCCTCGCTCGACGGCGTCACGGTGCAGGATCTCGGCCACGAGA
AATGCGGCATCGTCACCTTCGATATTGCCGGTGCGGACCATATGGCGCTG
AAGACGGCGCTGAGGGCGGAGAATATCAACATCACCGTCTCCGACCGATC
CTCGACCCGGCTGGACATGGAGGAACGCGGCTTCGAGAACCTCGTGCGGG
CCTCGGTGCATTGCTACAACACGTCGGAAGAGGTCAGCCGGTTCTGTGCC
GCTATCGACCGGCTGAGAAGCGCCTGA
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