mRNA_C-australica_Contig_1039.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1039.1.1
Unique NamemRNA_C-australica_Contig_1039.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1039.1.1 vs. uniprot
Match: D7FTX9_ECTSI (U3 small nucleolar ribonucleoprotein protein MPP10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTX9_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 2.190e-93
Identity = 168/293 (57.34%), Postives = 220/293 (75.09%), Query Frame = 1
Query:  172 RKLRASISEQEAELLAERPWHLQGTLHTYAGDRPENSLLEAVIDVDMATRAAPEVTEEHTKTLEEMIKDRIKEEKWDDVQPKHME--LLAKDREDLSMEKSKEGLGELYAAEYMKQTMGVEPDDPQAGLKEEMKGLFTKLCAKLDALSSFHYTPKPVIAEVKVKSNVPAIAIEEVLPVTLTDAQALAPEEAYGKKRGRAAEFLE---EMDQDERRRARGAKRTAKRKRRKHAEAEQKLVAKLKPGLGNKYAEKKMLDDLKAARNVVD--GEDVLDGKEFSTSAKFFSNLQDQV 1029
            R++++ IS+QE ELLAE+PW L+G +H++  DRP+NSLLEA +DV+ ATR AP  T EH  TL +MIK R  +  WDDV P+ ++   + K+   LS +KSKEGLGELY  E++K+TMGV  DDPQ GLK E+K LF+KLC KLDAL +FHYTPK  I E+KV+++V AIA+EEVLP ++ DA+ALAPEE Y KKRGR AEFLE   EM Q++R+R+R +K+  +RK R+ AEA QKLV+KL PGLGNKY + KM+ D++ A+NV    G +   G+EFSTSAKFFS LQ+ V
Sbjct:  296 RRMKSKISDQERELLAEKPWALRGEVHSH--DRPQNSLLEATVDVERATRVAPPPTAEHAMTLLDMIKKRCLDSNWDDVTPRDLQGPTVRKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKNELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAEAAQKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESV 586          
BLAST of mRNA_C-australica_Contig_1039.1.1 vs. uniprot
Match: A0A835YNW6_9STRA (Mpp10 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNW6_9STRA)

HSP 1 Score: 280 bits (715), Expect = 2.420e-89
Identity = 164/291 (56.36%), Postives = 209/291 (71.82%), Query Frame = 1
Query:  178 LRASISEQEAELLAERPWHLQGTLHTYAGDRPENSLLEAVIDVDMATRAAPEVTEEHTKTLEEMIKDRIKEEKWDDVQPKHMELLAKDRED---LSMEKSKEGLGELYAAEYMKQTMGVEPDDPQAGLKEEMKGLFTKLCAKLDALSSFHYTPKPVIAEVKVKSNVPAIAIEEVLPVTLTDAQALAPEEAYGKKRGRAAEFLE---EMDQDERRRARGAKRTAKRKRRKHAEAEQKLVAKLKPGLGNKYAEKKMLDDLKAARNVVDGE-DVLDGKEFSTSAKFFSNLQDQV 1029
            +R  I E EAELL ERPW L+G +   A DRPENSLLEA +DV+ ATR AP +T E T +LE++I+ RI E+K+DDV PK++EL AK RED   +SM+KS EGL  +Y  EY+KQ +GVE DDP   LKEE++  F +LC KLDAL +FH+ P+  + EV V ++VPAIA+EE LP  ++ A  LAPEE Y +KRGR A FLE   EMDQDER RAR AK+ ++ K RK  EAEQKLV++  PGLGN Y ++K+L D++ ARNV++G  D   GK+FSTS KFF  LQ QV
Sbjct:    1 MRGKIDELEAELLRERPWALRGEVA--AKDRPENSLLEAALDVERATRVAPAITVEATASLEDVIRQRILEDKFDDVAPKNIELSAKPREDAPEVSMDKSTEGLAAVYEKEYLKQALGVEEDDPSKDLKEELRRDFARLCGKLDALCNFHFRPRAHLPEVAVATDVPAIAMEEALPTGVSTADGLAPEEVYARKRGRRAVFLEGGAEMDQDERNRARLAKKRSRNKARKQTEAEQKLVSRANPGLGNPYEQRKLLADIRGARNVMEGAADARTGKDFSTSTKFFGALQKQV 289          
BLAST of mRNA_C-australica_Contig_1039.1.1 vs. uniprot
Match: A0A6V1QZP6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QZP6_HETAK)

HSP 1 Score: 263 bits (671), Expect = 1.850e-80
Identity = 161/307 (52.44%), Postives = 216/307 (70.36%), Query Frame = 1
Query:  142 EGATSFQLQQRKLRASISEQEAELLAERPWHLQGTLHTYAGDRPENSLLEAVIDVDMATRAAPEVTEEHTKTLEEMIKDRIKEEKWDDVQPKHMELLAKDREDL---SMEKSKEGLGELYAAEYMKQTMGVEPDDPQAGLKEEMKGLFTKLCAKLDALSSFHYTPKPVIAEVKVKSNVPAIAIEEVLPVTLTDAQALAPEEAYGKKRGRAA--EFLEEMDQDERRRARGAKRTAKRKRRKHAEAEQKLVAKLKPGLGNKYAEKKMLDDLKAARNVVDGEDVL------DGK-EFSTSAKFFSNLQDQ 1026
            EG ++ Q  + K+   I E E E LAE+PW ++G   T A DRPENSLLEA +DV+ A RAAP +TEE T  LE++IK RI E+ +DDV P+    +   R +L   S EKSK GLGELY  EY+KQ MGVE +DP    KEEM  +F KLC KLD+LS+FH+TPKPVI +++VK NVPAIA+EEVLP  ++ A ALAPEE + K +GR    +  EEM+Q+ER+RAR  K+ A+RK R+  EA+++LVAKL PG+GN Y ++K+L+ LK+ +NVV+G+++       DG  +F TSAKFF+ LQ+Q
Sbjct:  164 EGQSTHQRHKEKIAEQIDELEQEALAEKPWIMKG--ETGAADRPENSLLEAHLDVERAFRAAPRLTEETTAALEDVIKKRILEDAFDDVVPRTAPKVDGGRAELPEVSTEKSKAGLGELYEKEYLKQVMGVEDEDPNKAEKEEMAKIFKKLCYKLDSLSNFHFTPKPVIPDLQVKVNVPAIALEEVLPAAVSAADALAPEEVHAKAKGRKGVLQAREEMEQEERKRARAGKKAARRKDRQRKEADKRLVAKLNPGMGNPYEKEKILESLKS-KNVVEGKNLQSSSGDPDGSSDFKTSAKFFAKLQEQ 467          
BLAST of mRNA_C-australica_Contig_1039.1.1 vs. uniprot
Match: G4YNZ1_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4YNZ1_PHYSP)

HSP 1 Score: 248 bits (633), Expect = 1.050e-76
Identity = 152/300 (50.67%), Postives = 207/300 (69.00%), Query Frame = 1
Query:  151 TSFQLQQRKLRASISEQEAELLAERPWHLQGTLHTYAGDRPENSLLEAVIDVDMATRAAPEVTEEHTKTLEEMIKDRIKEEKWDDVQPKHM--ELLAKDR-EDLSMEKSKEGLGELYAAEYMKQTMGVEPDDPQAGLKEEMKGLFTKLCAKLDALSSFHYTPKPVIAEVKVKSNVPAIAIEEVLPVTLTDAQALAPEEAYGKKRGRAAEFL---EEMDQDERRRARGAKRTAKRKRRKHAEAEQKLVAKLKPGLGNKYAEKKMLDDLKAARNVVDGEDVL-DGKEFSTSAKFFSNLQDQV 1029
            +S Q Q+ +L+  I E E E ++E+PW L+G + + A  RPENSLLEAV+D D   +AAP +TEE +  LEEMIK RI E+ +DDV  K    E   K++ E++SMEKSKEGLGE+Y  EYMK  MG E DD     +EE++ +F  LC KLDALS++H+TPKP + E++VK  VPAIA+EEV+P++++DA   APEE Y KKR R    L   EEM Q ER+  R AK+ A+RK ++  E +++LVAKL PGLGNKY +KKML+ +  A+N+  G+ +    K+FS S +FFS LQD+V
Sbjct:   36 SSHQRQRLRLQKEIKELEQEAISEKPWLLKGEVRSAA--RPENSLLEAVLDYDRPVKAAPVITEEVSIALEEMIKKRILEDDFDDVIRKFAGNEQDEKNKLEEVSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIEVMFKSLCWKLDALSNYHFTPKPAVKELQVKPAVPAIAMEEVVPISVSDANLKAPEEVYDKKRKRGEAVLQSKEEMTQSERKALRNAKKHARRKEKRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSSKQFSNSKEFFSRLQDEV 333          
BLAST of mRNA_C-australica_Contig_1039.1.1 vs. uniprot
Match: A0A0P1AQ31_PLAHL (U3 small nucleolar ribonucleoprotein protein MPP10 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQ31_PLAHL)

HSP 1 Score: 251 bits (640), Expect = 7.630e-75
Identity = 151/300 (50.33%), Postives = 206/300 (68.67%), Query Frame = 1
Query:  151 TSFQLQQRKLRASISEQEAELLAERPWHLQGTLHTYAGDRPENSLLEAVIDVDMATRAAPEVTEEHTKTLEEMIKDRIKEEKWDDVQPK---HMELLAKDREDLSMEKSKEGLGELYAAEYMKQTMGVEPDDPQAGLKEEMKGLFTKLCAKLDALSSFHYTPKPVIAEVKVKSNVPAIAIEEVLPVTLTDAQALAPEEAYGKKRGRAAEFL---EEMDQDERRRARGAKRTAKRKRRKHAEAEQKLVAKLKPGLGNKYAEKKMLDDLKAARNVVDGEDVL-DGKEFSTSAKFFSNLQDQV 1029
            +S Q Q+++L   I E E E ++E+PW L+G + + A  RPENSLLEAV+D D   +AAP +TEE +  LEEMIK RI EE ++DV  K   + E      ED+SMEKSKEGLGE+Y  EYMK  MG EPDD     +EE++ +F  LC KLDALS++++TPKP + E++VK  VPAIA+EE++P++++DA   APEE Y KKR R    L   EEM Q ER+  R AK+ A+RK ++  E +++LVAKL PGLGNKYA+KKML+ +  A+N+  G+ +    K+FS S  FF+ LQD+V
Sbjct:  294 SSHQRQRKRLEKEIQELEQEAISEKPWLLKGEVRSAA--RPENSLLEAVLDYDRPVKAAPVITEEVSIALEEMIKKRILEEDYNDVIRKFAGNEEDRKNALEDVSMEKSKEGLGEIYEKEYMKTAMGFEPDDESKQDQEEIEVMFKSLCWKLDALSNYYFTPKPAVKELQVKPAVPAIAMEEIVPISVSDANLKAPEEVYAKKRKRGEAVLQSKEEMTQTERKALRNAKKHARRKEKRQREFDERLVAKLNPGLGNKYAKKKMLESIAGAKNITTGKQIEGSSKQFSNSKDFFTRLQDEV 591          
BLAST of mRNA_C-australica_Contig_1039.1.1 vs. uniprot
Match: A0A2D4C329_PYTIN (U3 small nucleolar ribonucleoprotein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C329_PYTIN)

HSP 1 Score: 241 bits (615), Expect = 2.020e-74
Identity = 145/300 (48.33%), Postives = 209/300 (69.67%), Query Frame = 1
Query:  151 TSFQLQQRKLRASISEQEAELLAERPWHLQGTLHTYAGDRPENSLLEAVIDVDMATRAAPEVTEEHTKTLEEMIKDRIKEEKWDDVQPK---HMELLAKDREDLSMEKSKEGLGELYAAEYMKQTMGVEPDDPQAGLKEEMKGLFTKLCAKLDALSSFHYTPKPVIAEVKVKSNVPAIAIEEVLPVTLTDAQALAPEEAYGKKRGRAAEFL---EEMDQDERRRARGAKRTAKRKRRKHAEAEQKLVAKLKPGLGNKYAEKKMLDDLKAARNVVDGEDVLDG-KEFSTSAKFFSNLQDQV 1029
            +S + Q+++L+  I++ E E L+++PW L+G + +  G RPENSLLEAV+D D   + AP +TEE +  LE+MIK RI E+ +DDV  K   + E   K   D+SMEKSKEGLGE+Y  EY+K  MG E DD     +EE+  +F  LC KLDALS++ +TPKP++ E++VK +VPAIA+EEV+P++++DA   APEE Y KKR R    L   EEM Q+ER   R AK+ ++RK ++  EA+++LVAKL PGLGNKY +KKML+ + +A+N+  G+++    K+FS S +FFS LQ++V
Sbjct:    2 SSHERQRQRLQKEIAQLEEEALSDKPWLLKGEVKS--GARPENSLLEAVLDYDRPVKVAPVITEEVSVALEDMIKKRILEDDFDDVIRKFAPNEEDEKKKLVDVSMEKSKEGLGEIYEKEYLKTAMGFEADDESKQDQEEIDVMFRSLCWKLDALSNYQFTPKPMVKELQVKPSVPAIAMEEVVPISVSDANLRAPEEIYDKKRKRGEAVLQSKEEMTQEERNALRLAKKRSRRKEKRQQEADERLVAKLNPGLGNKYEKKKMLESIASAKNITKGKEIEGSTKQFSNSKEFFSRLQEEV 299          
BLAST of mRNA_C-australica_Contig_1039.1.1 vs. uniprot
Match: A0A3M6VNB8_9STRA (U3 small nucleolar ribonucleoprotein protein MPP10 n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VNB8_9STRA)

HSP 1 Score: 248 bits (634), Expect = 9.260e-74
Identity = 150/300 (50.00%), Postives = 207/300 (69.00%), Query Frame = 1
Query:  151 TSFQLQQRKLRASISEQEAELLAERPWHLQGTLHTYAGDRPENSLLEAVIDVDMATRAAPEVTEEHTKTLEEMIKDRIKEEKWDDVQPK---HMELLAKDREDLSMEKSKEGLGELYAAEYMKQTMGVEPDDPQAGLKEEMKGLFTKLCAKLDALSSFHYTPKPVIAEVKVKSNVPAIAIEEVLPVTLTDAQALAPEEAYGKKRGRAAEFL---EEMDQDERRRARGAKRTAKRKRRKHAEAEQKLVAKLKPGLGNKYAEKKMLDDLKAARNVVDGEDVL-DGKEFSTSAKFFSNLQDQV 1029
            +S Q ++++L+  I E E E ++E+PW L+G + + A  RPENSLLEAV+D D   +AAP +TEE +  LEEM+K RI E+ +DDV  K   + E   K  E++SMEKSKEGLGE+Y  EYMK  MG E DD     +EE+  +F  LC KLDALS++H+TPKP + E++VK  VPAIA+EEV+P++++DA   APEE Y KKR R    L   EEM Q+ER+  R AK+ A+RK ++  E +++LVAKL PGLGNKY +KKML+ +  A+N+  G+ +    K+FS S +FFS LQD+V
Sbjct:  311 SSHQRRRQRLQKEIKELEREAISEKPWVLKGEVRSAA--RPENSLLEAVLDYDRPVKAAPVITEEVSIALEEMVKKRILEDDFDDVIRKFAGNEEDQKKKIEEVSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIDVMFKSLCWKLDALSNYHFTPKPAVKELQVKPAVPAIAMEEVVPISVSDANLKAPEEVYEKKRKRGEAVLQSKEEMTQNERKALRNAKKHARRKEKRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSSKQFSNSKEFFSRLQDEV 608          
BLAST of mRNA_C-australica_Contig_1039.1.1 vs. uniprot
Match: W2QWN2_PHYPN (U3 small nucleolar ribonucleoprotein protein MPP10 n=23 Tax=Phytophthora TaxID=4783 RepID=W2QWN2_PHYPN)

HSP 1 Score: 247 bits (630), Expect = 2.330e-73
Identity = 149/300 (49.67%), Postives = 206/300 (68.67%), Query Frame = 1
Query:  151 TSFQLQQRKLRASISEQEAELLAERPWHLQGTLHTYAGDRPENSLLEAVIDVDMATRAAPEVTEEHTKTLEEMIKDRIKEEKWDDVQPK---HMELLAKDREDLSMEKSKEGLGELYAAEYMKQTMGVEPDDPQAGLKEEMKGLFTKLCAKLDALSSFHYTPKPVIAEVKVKSNVPAIAIEEVLPVTLTDAQALAPEEAYGKKRGRAAEFL---EEMDQDERRRARGAKRTAKRKRRKHAEAEQKLVAKLKPGLGNKYAEKKMLDDLKAARNVVDGEDVL-DGKEFSTSAKFFSNLQDQV 1029
            +S Q Q+++L+  I + E E ++E+PW L+G + + A  RPENSLLEAV+D D   +AAP +TEE +  LEEMIK RI E+ +DDV  K   + E      E++SMEKSKEGLGE+Y  EYMK  MG E DD     +EE++ +F  LC KLDALS++H+TPKP + E++VK  VPAIA+EEV+P++++DA   APEE Y KKR R    L   EEM Q ER+  R AK+ A+RK ++  E +++LVAKL PGLGNKY +KKML+ +  A+N+  G+ +    K+FS S +FF+ LQD+V
Sbjct:  291 SSHQRQRQRLQKEIKDLEQEAISEKPWLLKGEVRSAA--RPENSLLEAVLDYDRPVKAAPVITEEVSIALEEMIKKRILEDDYDDVIRKFAGNEEDQKNKLEEVSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIEVMFKSLCWKLDALSNYHFTPKPAVKELQVKPAVPAIAMEEVVPISVSDANLKAPEEVYEKKRKRGEAVLQSKEEMTQTERKALRNAKKHARRKEKRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSSKQFSNSKEFFTRLQDEV 588          
BLAST of mRNA_C-australica_Contig_1039.1.1 vs. uniprot
Match: A0A662YH72_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YH72_9STRA)

HSP 1 Score: 243 bits (621), Expect = 7.110e-73
Identity = 148/297 (49.83%), Postives = 205/297 (69.02%), Query Frame = 1
Query:  151 TSFQLQQRKLRASISEQEAELLAERPWHLQGTLHTYAGDRPENSLLEAVIDVDMATRAAPEVTEEHTKTLEEMIKDRIKEEKWDDVQPKHM--ELLAKDR-EDLSMEKSKEGLGELYAAEYMKQTMGVEPDDPQAGLKEEMKGLFTKLCAKLDALSSFHYTPKPVIAEVKVKSNVPAIAIEEVLPVTLTDAQALAPEEAYGKKRGRAAEFL---EEMDQDERRRARGAKRTAKRKRRKHAEAEQKLVAKLKPGLGNKYAEKKMLDDLKAARNVVDGEDVL-DGKEFSTSAKFFSNLQ 1020
            +S Q Q+ +L+  I E E E + ++PW L+G + +  G RPENSLLEAV+D D   +AAP +TEE +  LEE+IK RI EE +DDV  K    E   K++ E++SMEKSKEGLGE+Y  EYMK  MG E DD     +EE++ +F  LC KLDALS++H+TPKP++ E++VK  VPAIA+EEV+P++++DA   APEE Y KKR R    L   EEM Q ER+  R AK+ ++RK ++  E ++KLVAKL PGLGNKY +KKML+ +  A+N+  G+++    K+FS S +FF+ LQ
Sbjct:  221 SSHQRQRLRLQKEIKELEEEAIGDKPWLLKGEVRS--GARPENSLLEAVLDYDRPVKAAPVITEEVSVALEELIKKRILEEDFDDVIRKFAGNEQDEKNKLEEVSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIEVMFKSLCWKLDALSNYHFTPKPIVKELQVKPAVPAIAMEEVVPISVSDANLKAPEEVYEKKRKRGEAVLQSKEEMTQGERKALRNAKKHSRRKEKRQREFDEKLVAKLNPGLGNKYEKKKMLESIAGAKNITKGKEIEGSSKQFSNSKEFFTRLQ 515          
BLAST of mRNA_C-australica_Contig_1039.1.1 vs. uniprot
Match: H3GM34_PHYRM (U3 small nucleolar ribonucleoprotein protein MPP10 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GM34_PHYRM)

HSP 1 Score: 245 bits (625), Expect = 1.220e-72
Identity = 150/300 (50.00%), Postives = 204/300 (68.00%), Query Frame = 1
Query:  151 TSFQLQQRKLRASISEQEAELLAERPWHLQGTLHTYAGDRPENSLLEAVIDVDMATRAAPEVTEEHTKTLEEMIKDRIKEEKWDDVQPK---HMELLAKDREDLSMEKSKEGLGELYAAEYMKQTMGVEPDDPQAGLKEEMKGLFTKLCAKLDALSSFHYTPKPVIAEVKVKSNVPAIAIEEVLPVTLTDAQALAPEEAYGKKRGRAAEFL---EEMDQDERRRARGAKRTAKRKRRKHAEAEQKLVAKLKPGLGNKYAEKKMLDDLKAARNVVDGEDVL-DGKEFSTSAKFFSNLQDQV 1029
            +S Q ++++L+  I + E E + E+PW L+G + + A  RPENSLLEAV+D D   +AAP +TEE +  LEEMIK RI E+ +DDV  K   + E      E++SMEKSKEGLGE+Y  EYMK  MG E DD     +EE++ +F  LC KLDALS++H+TPKP + E+KVK  VPAIA+EEV+P++++DA   APEE Y KKR R    L   EEM Q ER+  R AK+ A+RK  +  E +++LVAKL PGLGNKY +KKML+ +  A+N+  G+ +    K+FS S +FFS LQD+V
Sbjct:  287 SSHQRRRQRLQKEIKQFEDEAINEKPWLLKGEVRSAA--RPENSLLEAVLDYDRPVKAAPVITEEVSIALEEMIKKRILEDDFDDVIRKFAGNEEDQKNKLEEVSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIEVMFKSLCWKLDALSNYHFTPKPAVKELKVKPAVPAIAMEEVVPISVSDANLKAPEEVYEKKRKRGEAVLQSKEEMTQTERKALRNAKKHARRKENRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSSKQFSNSKEFFSRLQDEV 584          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1039.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTX9_ECTSI2.190e-9357.34U3 small nucleolar ribonucleoprotein protein MPP10... [more]
A0A835YNW6_9STRA2.420e-8956.36Mpp10 protein-domain-containing protein n=1 Tax=Tr... [more]
A0A6V1QZP6_HETAK1.850e-8052.44Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
G4YNZ1_PHYSP1.050e-7650.67Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A0P1AQ31_PLAHL7.630e-7550.33U3 small nucleolar ribonucleoprotein protein MPP10... [more]
A0A2D4C329_PYTIN2.020e-7448.33U3 small nucleolar ribonucleoprotein, putative n=1... [more]
A0A3M6VNB8_9STRA9.260e-7450.00U3 small nucleolar ribonucleoprotein protein MPP10... [more]
W2QWN2_PHYPN2.330e-7349.67U3 small nucleolar ribonucleoprotein protein MPP10... [more]
A0A662YH72_9STRA7.110e-7349.83Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
H3GM34_PHYRM1.220e-7250.00U3 small nucleolar ribonucleoprotein protein MPP10... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1039contigC-australica_Contig_1039:702..2599 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FTX9
Preferred nameMPHOSPH10
PFAMsMpp10
Model size1029
Max annot lvl2759|Eukaryota
KEGG koko:K14559
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005732,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009892,GO:0009987,GO:0010467,GO:0010563,GO:0010921,GO:0010923,GO:0016070,GO:0016072,GO:0019220,GO:0019222,GO:0022613,GO:0030490,GO:0030532,GO:0030684,GO:0030686,GO:0031323,GO:0031324,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0034457,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0035303,GO:0035305,GO:0042254,GO:0042274,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0045936,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051174,GO:0051336,GO:0051346,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0120114,GO:1901360,GO:1990904
Exons7
Evalue3.6e-94
EggNOG OGsCOG5384@1|root,KOG2600@2759|Eukaryota
Descriptionmaturation of SSU-rRNA
Cds size1029
COG categoryJ
BRITEko00000,ko00001,ko01009,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1039.1.1prot_C-australica_Contig_1039.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1039 702..2599 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586775.263163-CDS-C-australica_Contig_1039:701..8751682586775.263163-CDS-C-australica_Contig_1039:701..875Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1039 702..875 -
1682586775.2767398-CDS-C-australica_Contig_1039:940..10211682586775.2767398-CDS-C-australica_Contig_1039:940..1021Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1039 941..1021 -
1682586775.2870202-CDS-C-australica_Contig_1039:1236..13651682586775.2870202-CDS-C-australica_Contig_1039:1236..1365Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1039 1237..1365 -
1682586775.298513-CDS-C-australica_Contig_1039:1458..15451682586775.298513-CDS-C-australica_Contig_1039:1458..1545Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1039 1459..1545 -
1682586775.3096564-CDS-C-australica_Contig_1039:1688..17961682586775.3096564-CDS-C-australica_Contig_1039:1688..1796Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1039 1689..1796 -
1682586775.3260171-CDS-C-australica_Contig_1039:1955..21471682586775.3260171-CDS-C-australica_Contig_1039:1955..2147Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1039 1956..2147 -
1682586775.3397555-CDS-C-australica_Contig_1039:2341..25991682586775.3397555-CDS-C-australica_Contig_1039:2341..2599Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1039 2342..2599 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1039.1.1

>prot_C-australica_Contig_1039.1.1 ID=prot_C-australica_Contig_1039.1.1|Name=mRNA_C-australica_Contig_1039.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=343bp
KDSDYSDEEELEQQEVEDDGDEVMYGDMWEEEDAIDKEGSEEEEDEDEGA
TSFQLQQRKLRASISEQEAELLAERPWHLQGTLHTYAGDRPENSLLEAVI
DVDMATRAAPEVTEEHTKTLEEMIKDRIKEEKWDDVQPKHMELLAKDRED
LSMEKSKEGLGELYAAEYMKQTMGVEPDDPQAGLKEEMKGLFTKLCAKLD
ALSSFHYTPKPVIAEVKVKSNVPAIAIEEVLPVTLTDAQALAPEEAYGKK
RGRAAEFLEEMDQDERRRARGAKRTAKRKRRKHAEAEQKLVAKLKPGLGN
KYAEKKMLDDLKAARNVVDGEDVLDGKEFSTSAKFFSNLQDQV
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mRNA from alignment at C-australica_Contig_1039:702..2599-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1039.1.1 ID=mRNA_C-australica_Contig_1039.1.1|Name=mRNA_C-australica_Contig_1039.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1898bp|location=Sequence derived from alignment at C-australica_Contig_1039:702..2599- (Chrysoparadoxa australica CS_1217)
AAGGACAGTGATTATAGTGATGAGGAGGAGTTAGAGCAACAGGAGGTGGA AGATGATGGGGATGAGGTCATGTATGGTGATATGTGGGAAGAGGAAGATG CAATCGATAAGGAAGGCAGCGAAGAGGAAGAAGATGAGGATGAGGGTGCT ACTTCATTTCAGCTACAGCAGCGTAAGCTCCGGGCTAGTATATCAGAGCA GGAAGCTGAGTTATTAGCTGAGAGGCCATGGCATTTGCAAGGTACACTAC ACACATATGTGCTTGTTTTCTATTTGCCTTTTTTGCATAGCAACAACCCA TAGGCTACGCCTAACTCTATTTTGCTTTCTTCATCACATGGCAAGCATGA TTCTCTTTCCCCATTAGATGAGTGCGCAGTAGTATTTCCTAACCCATACT CTCTACCTTCCCCCCACTTGTATTTTTAATACATATGATAGGTGAGGCTA AGGCAGGGGATAGGCCTGAAAACTCTTTATTAGAGGCCGTGATAGATGTG GATATGGCAACTCGAGCTGCACCTGAGGTCACCGAGGAGCATACAAAAAC ACTGGAAGAGATGATCAAAGACAGGATCAAGGAGGAGAAGTGGGATGATG TGCAACCAAAGCATATGGAGCTACTTGCTAAGGATAGAGAGGATGTTGGT GGTAAGCAGTCATGTTGTGTTATGTTATGTTATGTCATGGCAGCTTCCAT AGTTGGCAATTCCTCTATTGGCTCATGTTTACTTACGCATCCCATGTAAC CCCTCACTCACACATGTATGCATTCCTACTCTCCCACCTCAGATGATTTT CAGTTGAGTATGGAAAAGAGCAAGGAAGGTCTAGGTGAGCTGTATGCTGC TGAGTATATGAAGCAAACAATGGGTGTTGAGCCAGATGATCCGCAAGCTG GATTGAAAGAGGTACGTCAAGTAGTAGGTCTATTGCCAGCTGTGCACAAG TTGTGATTGCTTAGGCTGAAAGGGAACGACCTTCCGAGTAGTTGTTTCTC AGTGGATACCTAGCTCCCTCTCATCTTTTGACTTGTCAACTCAACTCTTC CTAGGAGATGAAGGGCCTCTTTACCAAGCTCTGTGCAAAGCTTGATGCCC TGAGCAGCTTCCATTACACGCCAAAGCCCGTCATAGCAGAGGTAACACTA TCATCACCATCTTACATCCCCTGAGACCGAACTCTGTGAAGAGCACCAAG CACTTCTTTGTTGTTAATTGGTTTTTGGTTGCAGGTCAAGGTCAAGTCAA ATGTCCCAGCCATAGCTATTGAAGAGGTGCTGCCTGTAACTCTAACTGAT GCCCAAGCATTAGCCCCAGAGGAAGCATACGGAAAGAAGAGAGGAAGGGC AGCAGAGTTCCTGGTAAGATGCACCTGTTTTTTATCTCATATCTCTCTCA AAAATATCTCATATATATCAGGGGTCTCTACACCAATAGCACCACCCGCA CCTTTACCCAGTAACCCCCTACATTTTGAGTTATGAAAAGGCGGCTCTAT ATGGTTCATTGCATAACATTGGCCTCGTTTCTTTTCCTCTTGTGCTCAAA TGCTCAAATGCTCAAATACCAGGAGAAGGAAGAAATGGATCAGGACGAAA GGAGACGGGCAAGAGGGGCTAAAAGGACTGCAAAGAGAAAGAGAAGGAAG CATGCTGAGGTACAGGTCCCAAGCCTCATGACAACTTCCACAGCTGCCAT CCTAACTAAAATATCTCTTCCCAGGCAGAGCAAAAGTTGGTTGCAAAGCT TAAGCCTGGGTTGGGCAACAAGTATGCTGAAAAGAAGATGCTGGACGATC TTAAAGCAGCTCGGAATGTGGTGGATGGAGAGGACGTGTTGGATGGCAAG GAGTTCTCTACTAGTGCCAAGTTCTTCAGCAACCTCCAAGATCAGGTT
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Coding sequence (CDS) from alignment at C-australica_Contig_1039:702..2599-

>mRNA_C-australica_Contig_1039.1.1 ID=mRNA_C-australica_Contig_1039.1.1|Name=mRNA_C-australica_Contig_1039.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1029bp|location=Sequence derived from alignment at C-australica_Contig_1039:702..2599- (Chrysoparadoxa australica CS_1217)
AAGGACAGTGATTATAGTGATGAGGAGGAGTTAGAGCAACAGGAGGTGGA
AGATGATGGGGATGAGGTCATGTATGGTGATATGTGGGAAGAGGAAGATG
CAATCGATAAGGAAGGCAGCGAAGAGGAAGAAGATGAGGATGAGGGTGCT
ACTTCATTTCAGCTACAGCAGCGTAAGCTCCGGGCTAGTATATCAGAGCA
GGAAGCTGAGTTATTAGCTGAGAGGCCATGGCATTTGCAAGGTACACTAC
ACACATATGCAGGGGATAGGCCTGAAAACTCTTTATTAGAGGCCGTGATA
GATGTGGATATGGCAACTCGAGCTGCACCTGAGGTCACCGAGGAGCATAC
AAAAACACTGGAAGAGATGATCAAAGACAGGATCAAGGAGGAGAAGTGGG
ATGATGTGCAACCAAAGCATATGGAGCTACTTGCTAAGGATAGAGAGGAT
TTGAGTATGGAAAAGAGCAAGGAAGGTCTAGGTGAGCTGTATGCTGCTGA
GTATATGAAGCAAACAATGGGTGTTGAGCCAGATGATCCGCAAGCTGGAT
TGAAAGAGGAGATGAAGGGCCTCTTTACCAAGCTCTGTGCAAAGCTTGAT
GCCCTGAGCAGCTTCCATTACACGCCAAAGCCCGTCATAGCAGAGGTCAA
GGTCAAGTCAAATGTCCCAGCCATAGCTATTGAAGAGGTGCTGCCTGTAA
CTCTAACTGATGCCCAAGCATTAGCCCCAGAGGAAGCATACGGAAAGAAG
AGAGGAAGGGCAGCAGAGTTCCTGGAAGAAATGGATCAGGACGAAAGGAG
ACGGGCAAGAGGGGCTAAAAGGACTGCAAAGAGAAAGAGAAGGAAGCATG
CTGAGGCAGAGCAAAAGTTGGTTGCAAAGCTTAAGCCTGGGTTGGGCAAC
AAGTATGCTGAAAAGAAGATGCTGGACGATCTTAAAGCAGCTCGGAATGT
GGTGGATGGAGAGGACGTGTTGGATGGCAAGGAGTTCTCTACTAGTGCCA
AGTTCTTCAGCAACCTCCAAGATCAGGTT
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