mRNA_C-australica_Contig_10388.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10388.1.1
Unique NamemRNA_C-australica_Contig_10388.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: A0A222E2K8_9RHOB (Aspartyl/glutamyl-tRNA amidotransferase subunit A n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E2K8_9RHOB)

HSP 1 Score: 527 bits (1357), Expect = 1.090e-185
Identity = 264/274 (96.35%), Postives = 269/274 (98.18%), Query Frame = 1
Query:    1 NIGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGLT 822
            NI GYKPT GL+PRSAKS AGMVGTENF+TLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVS APAPATFRFAIPDAATLDTDGDAESARLFRESVARL++LGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQ+VDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIA GLT
Sbjct:  190 NIVGYKPTPGLVPRSAKSQAGMVGTENFLTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSAAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLETLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQTVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIASGLT 463          
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: A0A2D4UTP9_9RHOB (Allophanate hydrolase n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A2D4UTP9_9RHOB)

HSP 1 Score: 477 bits (1228), Expect = 2.300e-164
Identity = 234/273 (85.71%), Postives = 257/273 (94.14%), Query Frame = 1
Query:    1 NIGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGL 819
            NI GYKPT GL+PR+ +S AGMVGTENF+TLTM DSVLL+NL FRH+P DPFSKPEA GFRVS APAPA+FRFAIPDAATLDTDGDAESARLFRE+VARL++LGGTAVEIDMTPYLTAAKMLY+GPFIAQRYANFGDRF+ +E ALCPPTREILSWGRKY+ARDV++AQY++AGYKQQ+RQLF+ VDL+VTPTTPSTYTIEALLADNI LNAKMGTYTNFVNLLDLP+ASIPAGFR DGIP+GTML GPSLGDDLVCRVGAALH ALGIAPGL
Sbjct:  309 NIVGYKPTPGLVPRAGRSMAGMVGTENFLTLTMEDSVLLSNLWFRHEPGDPFSKPEADGFRVSCAPAPASFRFAIPDAATLDTDGDAESARLFRENVARLEALGGTAVEIDMTPYLTAAKMLYEGPFIAQRYANFGDRFNGNEDALCPPTREILSWGRKYSARDVYKAQYVMAGYKQQIRQLFRDVDLLVTPTTPSTYTIEALLADNIALNAKMGTYTNFVNLLDLPAASIPAGFRKDGIPLGTMLIGPSLGDDLVCRVGAALHAALGIAPGL 581          
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: UPI0013D10C1E (amidase family protein n=1 Tax=Pseudooceanicola aestuarii TaxID=2697319 RepID=UPI0013D10C1E)

HSP 1 Score: 468 bits (1203), Expect = 2.770e-162
Identity = 228/273 (83.52%), Postives = 253/273 (92.67%), Query Frame = 1
Query:    1 NIGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGL 819
            NI GYKPT GL+PR+  S AGMVGTENF+TLTMADSVLLTN+ +RHDPSDPFSKP A GFRV+T PAPA+FRFAIPDAATLDTDGDAE+A+LF  +V RL++LGGTAVEIDMTPYLTAA+MLYDGPFIAQRYANFGDRFD DE+ALCP TREILSWGRKYTARDVF+AQY++AGYKQQ+RQLF+ VDL+VTPT+P+TYTI ALLADNI LNAKMGTYTNFVNLLDLP+AS+PAGFR DGI +GTML GPSLGDDLVCRVGAALHDALGIAPGL
Sbjct:  190 NIVGYKPTPGLVPRAGTSQAGMVGTENFLTLTMADSVLLTNMVYRHDPSDPFSKPGAAGFRVTTDPAPASFRFAIPDAATLDTDGDAEAAQLFAANVDRLRALGGTAVEIDMTPYLTAARMLYDGPFIAQRYANFGDRFDADETALCPATREILSWGRKYTARDVFKAQYVVAGYKQQIRQLFRDVDLLVTPTSPTTYTIAALLADNIALNAKMGTYTNFVNLLDLPAASVPAGFRSDGIALGTMLIGPSLGDDLVCRVGAALHDALGIAPGL 462          
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: A0A1I1YJ79_9RHOB (Allophanate hydrolase n=1 Tax=Roseivivax sediminis TaxID=936889 RepID=A0A1I1YJ79_9RHOB)

HSP 1 Score: 454 bits (1168), Expect = 5.730e-157
Identity = 223/273 (81.68%), Postives = 249/273 (91.21%), Query Frame = 1
Query:    1 NIGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGL 819
            NI GYKPT GL+PR+  S AGMVGTENF+TLTM DSVLL+NL FR++P DPFSKPEA+GFRVS AP PA+FRFAIPDAA+LDTDGD ESARLFRE+V RL++LGG+AVEIDMTPYLTAAKMLYDG FIAQRYANF DRFD +E ALCPPTREILSWGRKY+ARDVF+AQY++AGY+QQ+RQLF+ V+L+VTPTTPSTY IE LLADNI LNAKMGTYTNFVNLLDLP+ASIPAGFR DGI +GTML GPSLGDDLVCRVGAALH A+GIAPGL
Sbjct:  190 NIVGYKPTPGLVPRAGLSMAGMVGTENFLTLTMEDSVLLSNLWFRYEPGDPFSKPEAEGFRVSCAPPPASFRFAIPDAASLDTDGDTESARLFRENVERLETLGGSAVEIDMTPYLTAAKMLYDGAFIAQRYANFADRFDGNEDALCPPTREILSWGRKYSARDVFKAQYVMAGYRQQIRQLFRDVELLVTPTTPSTYEIEELLADNIALNAKMGTYTNFVNLLDLPAASIPAGFRSDGIALGTMLIGPSLGDDLVCRVGAALHAAIGIAPGL 462          
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: UPI001C07EFF5 (amidase family protein n=1 Tax=Citreicella sp. C3M06 TaxID=2841564 RepID=UPI001C07EFF5)

HSP 1 Score: 453 bits (1166), Expect = 1.110e-156
Identity = 220/273 (80.59%), Postives = 246/273 (90.11%), Query Frame = 1
Query:    1 NIGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGL 819
            NI GYKPT GL+PR+  S AGMVGTENF+TLTMADSVLLTNL F ++PSDPFSKP+A GFR++T PAP TFRFAIPD ATLDTDGD +S RLFRE+VARL +LGGTAV IDMTPYLTAA+MLYDGPFIAQRYANFGD+FD DE ALCP TREILSWGR YTARDVF+AQY+IAGYKQQ+R LF+ VDL+VTPT+PSTYTIEA+LADNI LNA+MGTYTNFVNLLDLP+ SIPAGFR DGIP+GTML GPSLGDDL+CR+G ALH ALGIAPG+
Sbjct:  191 NIVGYKPTPGLIPRARASLAGMVGTENFLTLTMADSVLLTNLWFAYEPSDPFSKPQADGFRITTNPAPDTFRFAIPDEATLDTDGDGDSERLFRENVARLCALGGTAVPIDMTPYLTAARMLYDGPFIAQRYANFGDKFDGDEDALCPATREILSWGRNYTARDVFKAQYVIAGYKQQIRALFKDVDLLVTPTSPSTYTIEAVLADNIALNARMGTYTNFVNLLDLPAVSIPAGFRKDGIPLGTMLIGPSLGDDLICRIGGALHAALGIAPGI 463          
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: A0A3P3DIF1_9RHOB (Allophanate hydrolase n=1 Tax=Falsigemmobacter faecalis TaxID=2488730 RepID=A0A3P3DIF1_9RHOB)

HSP 1 Score: 331 bits (848), Expect = 1.590e-108
Identity = 166/273 (60.81%), Postives = 207/273 (75.82%), Query Frame = 1
Query:    4 IGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGLT 822
            I GYKPT GL+PR+ KS AGM G++N +TL++AD+V L N  F  DPSDP SKPEA+ FR++ AP PA FRFAIPD  ++  DGDAE+ +LFR SV  LKSLGG AVE+D++ YLT A+MLY+G FIAQR+ANF  RFD+D SAL P T EILSWG K+TA +VF+  YI+   KQ  R+L + VD +VTPTTP+TYTI  L ADNIRLNA MG+YTNFVNLLDLP+ S+PAG R DG+ +GTML G +L D+ +CR G AL  A+ +  G+T
Sbjct:  190 IVGYKPTPGLVPRAGKSPAGMCGSDNMLTLSVADAVELHNAWFTWDPSDPNSKPEAEAFRITLAPIPAAFRFAIPDQQSIFFDGDAEAEKLFRHSVEVLKSLGGEAVEVDVSDYLTVARMLYEGVFIAQRHANFHQRFDQDPSALHPATAEILSWGAKWTATEVFKQMYIVNAAKQNFRKLLKEVDFLVTPTTPTTYTIARLEADNIRLNANMGSYTNFVNLLDLPAISVPAGRRPDGLSLGTMLIGGTLEDEKICRFGHALQSAMNLPVGIT 462          
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: UPI001D0AD3F0 (allophanate hydrolase n=1 Tax=Acidisoma cellulosilyticum TaxID=2802395 RepID=UPI001D0AD3F0)

HSP 1 Score: 270 bits (691), Expect = 7.630e-85
Identity = 136/274 (49.64%), Postives = 178/274 (64.96%), Query Frame = 1
Query:    1 NIGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGLT 822
            N  G KPT GL+P    S AGM  + N MT+T+AD V+ T +   +D  DP S+PEA+ F +  +  P  FRF +P  AT    GDAE+ RLF ES+ARL+ +GG AVE+D  P+  AAKMLY+  FIA+RYAN    FD  E  + P TREI+ WGR Y+  DVF AQ  +A ++Q +R + + +D+IVTPTTP+T+T+E +LADNIR NA +GTYTNFVNLLD+ + ++P GFR DG P+G    G +L D L      A H ALG   G T
Sbjct:  187 NTVGIKPTPGLIPLGGGSRAGMSASHNVMTMTVADGVIATRVMIGYDAEDPLSRPEAEDFHLKLSALPRAFRFGVPSKATRIFAGDAEAERLFDESIARLERMGGKAVELDFAPFYAAAKMLYEDAFIARRYANLQSFFDAHEDQIYPATREIIGWGRSYSGADVFVAQQTLARHRQVIRHMTKGLDIIVTPTTPTTFTVEEMLADNIRRNAMLGTYTNFVNLLDMCAVTVPMGFRADGQPLGISFVGRALEDSLASSFAHAFHAALGGKLGAT 460          
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: UPI001D0A5603 (amidase family protein n=1 Tax=Acidisoma silvae TaxID=2802396 RepID=UPI001D0A5603)

HSP 1 Score: 256 bits (653), Expect = 3.800e-79
Identity = 132/274 (48.18%), Postives = 171/274 (62.41%), Query Frame = 1
Query:    1 NIGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGLT 822
            N  G KPT GL+     S AGM  + N MTLT+AD V+ T +   +D  DP S+ EA  F +     P  FRF +P  AT    GDAE+ RLF E++ARL+ LGG  VE+D  P+  AAKMLY+  FIA+RYAN    FD  E  + P TR+I+ WGR Y+  DVF AQ  +A + + +RQ+   +D++VTPTTP+T+TIE +LADNIR NA +GTYTNFVNLLD+ + ++P GFR DG P+G    G +L D        A H ALG   G T
Sbjct:  187 NTVGIKPTPGLIALGGGSRAGMSASHNVMTLTVADGVIATRVMIGYDLDDPLSRAEADTFHLKLTALPDVFRFGVPSKATRIFAGDAEAERLFDEAIARLERLGGQPVELDFAPFYAAAKMLYEDAFIARRYANLQSFFDAHEDQIYPATRDIIGWGRGYSGADVFVAQQTLARHARTIRQMTADLDILVTPTTPTTFTIEQMLADNIRNNAMLGTYTNFVNLLDMCAVTVPMGFRGDGQPLGISFVGQALQDSAAASFAQAFHTALGGKLGAT 460          
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: A0A7W9L1P0_9HYPH (Allophanate hydrolase n=1 Tax=Prosthecomicrobium pneumaticum TaxID=81895 RepID=A0A7W9L1P0_9HYPH)

HSP 1 Score: 248 bits (633), Expect = 3.460e-76
Identity = 131/273 (47.99%), Postives = 176/273 (64.47%), Query Frame = 1
Query:    4 IGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGLT 822
            I G+KPT GL+P    S AGM  +   +TLT+ D+V   N   RHDP DP S PEA+GF ++  PAP  FRFA+P   +    GDA +  LF  ++ARL+++GGTAV  D  P   AA+MLY+  FIA+RYAN  + F        P +REIL+ G +Y+  DVF AQY +AGY++   ++F+  D++VTPTTP+T+TI AL   NI  NA MG+YTNFVNL++  + S+P GFR DG+  G ML GPS  D+ +  +GAA H ALG+  G T
Sbjct:  190 IVGHKPTNGLIPFGI-SKAGMGASHTVLTLTVEDNVAALNTLVRHDPDDPLSLPEAEGFTLTVPPAPERFRFAVPSRESRLFAGDAAAEALFDAAIARLEAMGGTAVPFDYAPLHAAARMLYEDAFIARRYANLEETFRRCGDRFHPASREILASGARYSGADVFIAQYRLAGYRKYAMRIFEDADVMVTPTTPTTFTIAALEEKNIGRNAIMGSYTNFVNLMEFCALSVPNGFRPDGLAQGLMLIGPSFADNRLLGLGAAYHRALGLPMGAT 461          
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: UPI00135A56E7 (amidase family protein n=2 Tax=Geminicoccus TaxID=489140 RepID=UPI00135A56E7)

HSP 1 Score: 232 bits (591), Expect = 6.020e-70
Identity = 125/274 (45.62%), Postives = 167/274 (60.95%), Query Frame = 1
Query:    1 NIGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGLT 822
            N+ G KPT GL+P    S AGM  +   +TLT+ D+V       +H   DP S PEA  F +   P P +FRFA+P   +    GD  +  LF  ++ARL+ +GGTAVE D  P   AAK+LY+  FIA+RYAN    +++      P TREILSWG +Y+  DVF AQY +A Y++   +LF+ VD++VTPTTP+T+TI  L   NI  NA MGTYTNFVNL++  + ++P G R DG+P G M   PS  D+ +   GAA H ALG+  G T
Sbjct:  189 NLVGLKPTNGLVPLGI-SAAGMGASHTVLTLTVEDNVHAIRQLIQHVEDDPLSLPEAASFDLKIDPLPESFRFAVPSKGSRLFFGDQAAEALFDAAIARLEGMGGTAVEFDYAPLHAAAKLLYEDAFIARRYANLRPVWEKCGDRFHPATREILSWGTRYSGADVFVAQYKLAAYRKIAMKLFEDVDVMVTPTTPTTFTIAELEEKNIERNAIMGTYTNFVNLMEFCALAVPNGLRPDGLPQGLMFIAPSFQDNRILGFGAAYHRALGLTMGAT 461          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A222E2K8_9RHOB1.090e-18596.35Aspartyl/glutamyl-tRNA amidotransferase subunit A ... [more]
A0A2D4UTP9_9RHOB2.300e-16485.71Allophanate hydrolase n=2 Tax=Rhodobacterales TaxI... [more]
UPI0013D10C1E2.770e-16283.52amidase family protein n=1 Tax=Pseudooceanicola ae... [more]
A0A1I1YJ79_9RHOB5.730e-15781.68Allophanate hydrolase n=1 Tax=Roseivivax sediminis... [more]
UPI001C07EFF51.110e-15680.59amidase family protein n=1 Tax=Citreicella sp. C3M... [more]
A0A3P3DIF1_9RHOB1.590e-10860.81Allophanate hydrolase n=1 Tax=Falsigemmobacter fae... [more]
UPI001D0AD3F07.630e-8549.64allophanate hydrolase n=1 Tax=Acidisoma cellulosil... [more]
UPI001D0A56033.800e-7948.18amidase family protein n=1 Tax=Acidisoma silvae Ta... [more]
A0A7W9L1P0_9HYPH3.460e-7647.99Allophanate hydrolase n=1 Tax=Prosthecomicrobium p... [more]
UPI00135A56E76.020e-7045.62amidase family protein n=2 Tax=Geminicoccus TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10388contigC-australica_Contig_10388:3..824 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1089551.KE386572_gene2331
PFAMsAmidase
Model size822
Max annot lvl1224|Proteobacteria
KEGG rclassRC02756
KEGG koko:K01457
KEGG ReactionR00005
KEGG Pathwayko00220,ko00791,ko01100,ko01120,map00220,map00791,map01100,map01120
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.97e-71
EggNOG OGsCOG0154@1|root,COG0154@2|Bacteria,1MUVQ@1224|Proteobacteria
EC3.5.1.54
DescriptionAllows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
Cds size822
COG categoryJ
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586775.2132218-CDS-C-australica_Contig_10388:2..8241682586775.2132218-CDS-C-australica_Contig_10388:2..824Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10388 3..824 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10388.1.1prot_C-australica_Contig_10388.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10388 3..824 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10388.1.1

>prot_C-australica_Contig_10388.1.1 ID=prot_C-australica_Contig_10388.1.1|Name=mRNA_C-australica_Contig_10388.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=274bp
NIGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSD
PFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARL
KSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPT
REILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTI
EALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPS
LGDDLVCRVGAALHDALGIAPGLT
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mRNA from alignment at C-australica_Contig_10388:3..824+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10388.1.1 ID=mRNA_C-australica_Contig_10388.1.1|Name=mRNA_C-australica_Contig_10388.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=822bp|location=Sequence derived from alignment at C-australica_Contig_10388:3..824+ (Chrysoparadoxa australica CS_1217)
AACATCGGCGGTTACAAACCCACGACGGGTCTGCTGCCCCGCTCGGCCAA ATCGCATGCCGGGATGGTCGGAACTGAAAACTTTATGACGCTGACCATGG CAGACAGCGTGCTGCTGACAAACCTTGGGTTTCGGCACGATCCGTCGGAC CCGTTCTCAAAGCCCGAGGCACAGGGTTTTCGCGTCAGCACCGCCCCCGC GCCCGCAACTTTCCGTTTCGCAATCCCAGATGCCGCGACGCTGGACACCG ATGGCGACGCCGAGTCCGCGCGGCTGTTCCGTGAAAGCGTTGCCCGACTG AAATCGCTGGGCGGAACTGCGGTCGAGATCGACATGACGCCGTACCTAAC CGCTGCGAAAATGCTGTATGATGGGCCGTTCATCGCGCAACGGTACGCCA ATTTCGGCGACCGGTTCGACGAGGACGAAAGCGCCCTTTGCCCGCCCACG CGCGAGATCCTGTCATGGGGTCGCAAGTATACCGCCCGCGACGTTTTCCG CGCCCAGTACATCATTGCGGGCTACAAGCAGCAGGTGCGGCAATTGTTTC AATCGGTTGATCTGATCGTCACGCCCACGACGCCGTCAACCTACACAATC GAGGCGCTGCTGGCGGACAACATCCGCCTGAACGCAAAGATGGGCACCTA CACCAATTTCGTGAACCTGCTGGATCTGCCCTCTGCCTCGATCCCAGCCG GGTTTCGACACGACGGCATTCCTATGGGCACAATGCTGACAGGCCCGTCG CTGGGCGACGATCTGGTGTGCCGTGTGGGTGCGGCGCTGCATGACGCGCT GGGGATCGCGCCCGGTTTGACC
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Coding sequence (CDS) from alignment at C-australica_Contig_10388:3..824+

>mRNA_C-australica_Contig_10388.1.1 ID=mRNA_C-australica_Contig_10388.1.1|Name=mRNA_C-australica_Contig_10388.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=822bp|location=Sequence derived from alignment at C-australica_Contig_10388:3..824+ (Chrysoparadoxa australica CS_1217)
AACATCGGCGGTTACAAACCCACGACGGGTCTGCTGCCCCGCTCGGCCAA
ATCGCATGCCGGGATGGTCGGAACTGAAAACTTTATGACGCTGACCATGG
CAGACAGCGTGCTGCTGACAAACCTTGGGTTTCGGCACGATCCGTCGGAC
CCGTTCTCAAAGCCCGAGGCACAGGGTTTTCGCGTCAGCACCGCCCCCGC
GCCCGCAACTTTCCGTTTCGCAATCCCAGATGCCGCGACGCTGGACACCG
ATGGCGACGCCGAGTCCGCGCGGCTGTTCCGTGAAAGCGTTGCCCGACTG
AAATCGCTGGGCGGAACTGCGGTCGAGATCGACATGACGCCGTACCTAAC
CGCTGCGAAAATGCTGTATGATGGGCCGTTCATCGCGCAACGGTACGCCA
ATTTCGGCGACCGGTTCGACGAGGACGAAAGCGCCCTTTGCCCGCCCACG
CGCGAGATCCTGTCATGGGGTCGCAAGTATACCGCCCGCGACGTTTTCCG
CGCCCAGTACATCATTGCGGGCTACAAGCAGCAGGTGCGGCAATTGTTTC
AATCGGTTGATCTGATCGTCACGCCCACGACGCCGTCAACCTACACAATC
GAGGCGCTGCTGGCGGACAACATCCGCCTGAACGCAAAGATGGGCACCTA
CACCAATTTCGTGAACCTGCTGGATCTGCCCTCTGCCTCGATCCCAGCCG
GGTTTCGACACGACGGCATTCCTATGGGCACAATGCTGACAGGCCCGTCG
CTGGGCGACGATCTGGTGTGCCGTGTGGGTGCGGCGCTGCATGACGCGCT
GGGGATCGCGCCCGGTTTGACC
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