mRNA_C-australica_Contig_10388.1.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: A0A222E2K8_9RHOB (Aspartyl/glutamyl-tRNA amidotransferase subunit A n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E2K8_9RHOB) HSP 1 Score: 527 bits (1357), Expect = 1.090e-185 Identity = 264/274 (96.35%), Postives = 269/274 (98.18%), Query Frame = 1
Query: 1 NIGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGLT 822
NI GYKPT GL+PRSAKS AGMVGTENF+TLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVS APAPATFRFAIPDAATLDTDGDAESARLFRESVARL++LGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQ+VDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIA GLT
Sbjct: 190 NIVGYKPTPGLVPRSAKSQAGMVGTENFLTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSAAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLETLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQTVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIASGLT 463
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: A0A2D4UTP9_9RHOB (Allophanate hydrolase n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A2D4UTP9_9RHOB) HSP 1 Score: 477 bits (1228), Expect = 2.300e-164 Identity = 234/273 (85.71%), Postives = 257/273 (94.14%), Query Frame = 1
Query: 1 NIGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGL 819
NI GYKPT GL+PR+ +S AGMVGTENF+TLTM DSVLL+NL FRH+P DPFSKPEA GFRVS APAPA+FRFAIPDAATLDTDGDAESARLFRE+VARL++LGGTAVEIDMTPYLTAAKMLY+GPFIAQRYANFGDRF+ +E ALCPPTREILSWGRKY+ARDV++AQY++AGYKQQ+RQLF+ VDL+VTPTTPSTYTIEALLADNI LNAKMGTYTNFVNLLDLP+ASIPAGFR DGIP+GTML GPSLGDDLVCRVGAALH ALGIAPGL
Sbjct: 309 NIVGYKPTPGLVPRAGRSMAGMVGTENFLTLTMEDSVLLSNLWFRHEPGDPFSKPEADGFRVSCAPAPASFRFAIPDAATLDTDGDAESARLFRENVARLEALGGTAVEIDMTPYLTAAKMLYEGPFIAQRYANFGDRFNGNEDALCPPTREILSWGRKYSARDVYKAQYVMAGYKQQIRQLFRDVDLLVTPTTPSTYTIEALLADNIALNAKMGTYTNFVNLLDLPAASIPAGFRKDGIPLGTMLIGPSLGDDLVCRVGAALHAALGIAPGL 581
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: UPI0013D10C1E (amidase family protein n=1 Tax=Pseudooceanicola aestuarii TaxID=2697319 RepID=UPI0013D10C1E) HSP 1 Score: 468 bits (1203), Expect = 2.770e-162 Identity = 228/273 (83.52%), Postives = 253/273 (92.67%), Query Frame = 1
Query: 1 NIGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGL 819
NI GYKPT GL+PR+ S AGMVGTENF+TLTMADSVLLTN+ +RHDPSDPFSKP A GFRV+T PAPA+FRFAIPDAATLDTDGDAE+A+LF +V RL++LGGTAVEIDMTPYLTAA+MLYDGPFIAQRYANFGDRFD DE+ALCP TREILSWGRKYTARDVF+AQY++AGYKQQ+RQLF+ VDL+VTPT+P+TYTI ALLADNI LNAKMGTYTNFVNLLDLP+AS+PAGFR DGI +GTML GPSLGDDLVCRVGAALHDALGIAPGL
Sbjct: 190 NIVGYKPTPGLVPRAGTSQAGMVGTENFLTLTMADSVLLTNMVYRHDPSDPFSKPGAAGFRVTTDPAPASFRFAIPDAATLDTDGDAEAAQLFAANVDRLRALGGTAVEIDMTPYLTAARMLYDGPFIAQRYANFGDRFDADETALCPATREILSWGRKYTARDVFKAQYVVAGYKQQIRQLFRDVDLLVTPTSPTTYTIAALLADNIALNAKMGTYTNFVNLLDLPAASVPAGFRSDGIALGTMLIGPSLGDDLVCRVGAALHDALGIAPGL 462
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: A0A1I1YJ79_9RHOB (Allophanate hydrolase n=1 Tax=Roseivivax sediminis TaxID=936889 RepID=A0A1I1YJ79_9RHOB) HSP 1 Score: 454 bits (1168), Expect = 5.730e-157 Identity = 223/273 (81.68%), Postives = 249/273 (91.21%), Query Frame = 1
Query: 1 NIGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGL 819
NI GYKPT GL+PR+ S AGMVGTENF+TLTM DSVLL+NL FR++P DPFSKPEA+GFRVS AP PA+FRFAIPDAA+LDTDGD ESARLFRE+V RL++LGG+AVEIDMTPYLTAAKMLYDG FIAQRYANF DRFD +E ALCPPTREILSWGRKY+ARDVF+AQY++AGY+QQ+RQLF+ V+L+VTPTTPSTY IE LLADNI LNAKMGTYTNFVNLLDLP+ASIPAGFR DGI +GTML GPSLGDDLVCRVGAALH A+GIAPGL
Sbjct: 190 NIVGYKPTPGLVPRAGLSMAGMVGTENFLTLTMEDSVLLSNLWFRYEPGDPFSKPEAEGFRVSCAPPPASFRFAIPDAASLDTDGDTESARLFRENVERLETLGGSAVEIDMTPYLTAAKMLYDGAFIAQRYANFADRFDGNEDALCPPTREILSWGRKYSARDVFKAQYVMAGYRQQIRQLFRDVELLVTPTTPSTYEIEELLADNIALNAKMGTYTNFVNLLDLPAASIPAGFRSDGIALGTMLIGPSLGDDLVCRVGAALHAAIGIAPGL 462
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: UPI001C07EFF5 (amidase family protein n=1 Tax=Citreicella sp. C3M06 TaxID=2841564 RepID=UPI001C07EFF5) HSP 1 Score: 453 bits (1166), Expect = 1.110e-156 Identity = 220/273 (80.59%), Postives = 246/273 (90.11%), Query Frame = 1
Query: 1 NIGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGL 819
NI GYKPT GL+PR+ S AGMVGTENF+TLTMADSVLLTNL F ++PSDPFSKP+A GFR++T PAP TFRFAIPD ATLDTDGD +S RLFRE+VARL +LGGTAV IDMTPYLTAA+MLYDGPFIAQRYANFGD+FD DE ALCP TREILSWGR YTARDVF+AQY+IAGYKQQ+R LF+ VDL+VTPT+PSTYTIEA+LADNI LNA+MGTYTNFVNLLDLP+ SIPAGFR DGIP+GTML GPSLGDDL+CR+G ALH ALGIAPG+
Sbjct: 191 NIVGYKPTPGLIPRARASLAGMVGTENFLTLTMADSVLLTNLWFAYEPSDPFSKPQADGFRITTNPAPDTFRFAIPDEATLDTDGDGDSERLFRENVARLCALGGTAVPIDMTPYLTAARMLYDGPFIAQRYANFGDKFDGDEDALCPATREILSWGRNYTARDVFKAQYVIAGYKQQIRALFKDVDLLVTPTSPSTYTIEAVLADNIALNARMGTYTNFVNLLDLPAVSIPAGFRKDGIPLGTMLIGPSLGDDLICRIGGALHAALGIAPGI 463
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: A0A3P3DIF1_9RHOB (Allophanate hydrolase n=1 Tax=Falsigemmobacter faecalis TaxID=2488730 RepID=A0A3P3DIF1_9RHOB) HSP 1 Score: 331 bits (848), Expect = 1.590e-108 Identity = 166/273 (60.81%), Postives = 207/273 (75.82%), Query Frame = 1
Query: 4 IGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGLT 822
I GYKPT GL+PR+ KS AGM G++N +TL++AD+V L N F DPSDP SKPEA+ FR++ AP PA FRFAIPD ++ DGDAE+ +LFR SV LKSLGG AVE+D++ YLT A+MLY+G FIAQR+ANF RFD+D SAL P T EILSWG K+TA +VF+ YI+ KQ R+L + VD +VTPTTP+TYTI L ADNIRLNA MG+YTNFVNLLDLP+ S+PAG R DG+ +GTML G +L D+ +CR G AL A+ + G+T
Sbjct: 190 IVGYKPTPGLVPRAGKSPAGMCGSDNMLTLSVADAVELHNAWFTWDPSDPNSKPEAEAFRITLAPIPAAFRFAIPDQQSIFFDGDAEAEKLFRHSVEVLKSLGGEAVEVDVSDYLTVARMLYEGVFIAQRHANFHQRFDQDPSALHPATAEILSWGAKWTATEVFKQMYIVNAAKQNFRKLLKEVDFLVTPTTPTTYTIARLEADNIRLNANMGSYTNFVNLLDLPAISVPAGRRPDGLSLGTMLIGGTLEDEKICRFGHALQSAMNLPVGIT 462
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: UPI001D0AD3F0 (allophanate hydrolase n=1 Tax=Acidisoma cellulosilyticum TaxID=2802395 RepID=UPI001D0AD3F0) HSP 1 Score: 270 bits (691), Expect = 7.630e-85 Identity = 136/274 (49.64%), Postives = 178/274 (64.96%), Query Frame = 1
Query: 1 NIGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGLT 822
N G KPT GL+P S AGM + N MT+T+AD V+ T + +D DP S+PEA+ F + + P FRF +P AT GDAE+ RLF ES+ARL+ +GG AVE+D P+ AAKMLY+ FIA+RYAN FD E + P TREI+ WGR Y+ DVF AQ +A ++Q +R + + +D+IVTPTTP+T+T+E +LADNIR NA +GTYTNFVNLLD+ + ++P GFR DG P+G G +L D L A H ALG G T
Sbjct: 187 NTVGIKPTPGLIPLGGGSRAGMSASHNVMTMTVADGVIATRVMIGYDAEDPLSRPEAEDFHLKLSALPRAFRFGVPSKATRIFAGDAEAERLFDESIARLERMGGKAVELDFAPFYAAAKMLYEDAFIARRYANLQSFFDAHEDQIYPATREIIGWGRSYSGADVFVAQQTLARHRQVIRHMTKGLDIIVTPTTPTTFTVEEMLADNIRRNAMLGTYTNFVNLLDMCAVTVPMGFRADGQPLGISFVGRALEDSLASSFAHAFHAALGGKLGAT 460
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: UPI001D0A5603 (amidase family protein n=1 Tax=Acidisoma silvae TaxID=2802396 RepID=UPI001D0A5603) HSP 1 Score: 256 bits (653), Expect = 3.800e-79 Identity = 132/274 (48.18%), Postives = 171/274 (62.41%), Query Frame = 1
Query: 1 NIGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGLT 822
N G KPT GL+ S AGM + N MTLT+AD V+ T + +D DP S+ EA F + P FRF +P AT GDAE+ RLF E++ARL+ LGG VE+D P+ AAKMLY+ FIA+RYAN FD E + P TR+I+ WGR Y+ DVF AQ +A + + +RQ+ +D++VTPTTP+T+TIE +LADNIR NA +GTYTNFVNLLD+ + ++P GFR DG P+G G +L D A H ALG G T
Sbjct: 187 NTVGIKPTPGLIALGGGSRAGMSASHNVMTLTVADGVIATRVMIGYDLDDPLSRAEADTFHLKLTALPDVFRFGVPSKATRIFAGDAEAERLFDEAIARLERLGGQPVELDFAPFYAAAKMLYEDAFIARRYANLQSFFDAHEDQIYPATRDIIGWGRGYSGADVFVAQQTLARHARTIRQMTADLDILVTPTTPTTFTIEQMLADNIRNNAMLGTYTNFVNLLDMCAVTVPMGFRGDGQPLGISFVGQALQDSAAASFAQAFHTALGGKLGAT 460
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: A0A7W9L1P0_9HYPH (Allophanate hydrolase n=1 Tax=Prosthecomicrobium pneumaticum TaxID=81895 RepID=A0A7W9L1P0_9HYPH) HSP 1 Score: 248 bits (633), Expect = 3.460e-76 Identity = 131/273 (47.99%), Postives = 176/273 (64.47%), Query Frame = 1
Query: 4 IGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGLT 822
I G+KPT GL+P S AGM + +TLT+ D+V N RHDP DP S PEA+GF ++ PAP FRFA+P + GDA + LF ++ARL+++GGTAV D P AA+MLY+ FIA+RYAN + F P +REIL+ G +Y+ DVF AQY +AGY++ ++F+ D++VTPTTP+T+TI AL NI NA MG+YTNFVNL++ + S+P GFR DG+ G ML GPS D+ + +GAA H ALG+ G T
Sbjct: 190 IVGHKPTNGLIPFGI-SKAGMGASHTVLTLTVEDNVAALNTLVRHDPDDPLSLPEAEGFTLTVPPAPERFRFAVPSRESRLFAGDAAAEALFDAAIARLEAMGGTAVPFDYAPLHAAARMLYEDAFIARRYANLEETFRRCGDRFHPASREILASGARYSGADVFIAQYRLAGYRKYAMRIFEDADVMVTPTTPTTFTIAALEEKNIGRNAIMGSYTNFVNLMEFCALSVPNGFRPDGLAQGLMLIGPSFADNRLLGLGAAYHRALGLPMGAT 461
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Match: UPI00135A56E7 (amidase family protein n=2 Tax=Geminicoccus TaxID=489140 RepID=UPI00135A56E7) HSP 1 Score: 232 bits (591), Expect = 6.020e-70 Identity = 125/274 (45.62%), Postives = 167/274 (60.95%), Query Frame = 1
Query: 1 NIGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDPFSKPEAQGFRVSTAPAPATFRFAIPDAATLDTDGDAESARLFRESVARLKSLGGTAVEIDMTPYLTAAKMLYDGPFIAQRYANFGDRFDEDESALCPPTREILSWGRKYTARDVFRAQYIIAGYKQQVRQLFQSVDLIVTPTTPSTYTIEALLADNIRLNAKMGTYTNFVNLLDLPSASIPAGFRHDGIPMGTMLTGPSLGDDLVCRVGAALHDALGIAPGLT 822
N+ G KPT GL+P S AGM + +TLT+ D+V +H DP S PEA F + P P +FRFA+P + GD + LF ++ARL+ +GGTAVE D P AAK+LY+ FIA+RYAN +++ P TREILSWG +Y+ DVF AQY +A Y++ +LF+ VD++VTPTTP+T+TI L NI NA MGTYTNFVNL++ + ++P G R DG+P G M PS D+ + GAA H ALG+ G T
Sbjct: 189 NLVGLKPTNGLVPLGI-SAAGMGASHTVLTLTVEDNVHAIRQLIQHVEDDPLSLPEAASFDLKIDPLPESFRFAVPSKGSRLFFGDQAAEALFDAAIARLEGMGGTAVEFDYAPLHAAAKLLYEDAFIARRYANLRPVWEKCGDRFHPATREILSWGTRYSGADVFVAQYKLAAYRKIAMKLFEDVDVMVTPTTPTTFTIAELEEKNIERNAIMGTYTNFVNLMEFCALAVPNGLRPDGLPQGLMFIAPSFQDNRILGFGAAYHRALGLTMGAT 461 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10388.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10388.1.1 >prot_C-australica_Contig_10388.1.1 ID=prot_C-australica_Contig_10388.1.1|Name=mRNA_C-australica_Contig_10388.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=274bp NIGGYKPTTGLLPRSAKSHAGMVGTENFMTLTMADSVLLTNLGFRHDPSDback to top mRNA from alignment at C-australica_Contig_10388:3..824+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10388.1.1 ID=mRNA_C-australica_Contig_10388.1.1|Name=mRNA_C-australica_Contig_10388.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=822bp|location=Sequence derived from alignment at C-australica_Contig_10388:3..824+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10388:3..824+ >mRNA_C-australica_Contig_10388.1.1 ID=mRNA_C-australica_Contig_10388.1.1|Name=mRNA_C-australica_Contig_10388.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=822bp|location=Sequence derived from alignment at C-australica_Contig_10388:3..824+ (Chrysoparadoxa australica CS_1217)back to top |