mRNA_C-australica_Contig_1038.2.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_1038.2.1 vs. uniprot
Match: A0A835ZFH0_9STRA (Ribosomal protein S19-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFH0_9STRA) HSP 1 Score: 256 bits (655), Expect = 9.500e-86 Identity = 127/147 (86.39%), Postives = 141/147 (95.92%), Query Frame = 1
Query: 1 MTPEQIMEIKKKRTFKKFMFRGIDLEKLLDLSTADFMELVHARARRRMTRGLKRKPMALIKRLRKAKKAAGPMEKPRGIKTHLRNMIIVPEMIGSIVGIYNGKSFNGVEIKPEMVGMYLGEFSITYKPVRHGRPGIGSTASARFIPL 441
++ EQ+ME++KKRTFKKF FRG++LEKLLDLS +FME+VHARARRRMTRGLKRKPMALIKRLRKAKK A PME+P+GIKTHLRNM+IVPEMIGS+VGIYNGKSFNG+EIKPEMVGMYLGEFSITYKPVRHGRPGIGSTASARFIPL
Sbjct: 5 LSAEQMMEMRKKRTFKKFTFRGVELEKLLDLSNEEFMEMVHARARRRMTRGLKRKPMALIKRLRKAKKEAAPMERPKGIKTHLRNMLIVPEMIGSVVGIYNGKSFNGIEIKPEMVGMYLGEFSITYKPVRHGRPGIGSTASARFIPL 151
BLAST of mRNA_C-australica_Contig_1038.2.1 vs. uniprot
Match: A0A6H5K031_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K031_9PHAE) HSP 1 Score: 246 bits (627), Expect = 5.330e-81 Identity = 125/147 (85.03%), Postives = 136/147 (92.52%), Query Frame = 1
Query: 1 MTPEQIMEIKKKRTFKKFMFRGIDLEKLLDLSTADFMELVHARARRRMTRGLKRKPMALIKRLRKAKKAAGPMEKPRGIKTHLRNMIIVPEMIGSIVGIYNGKSFNGVEIKPEMVGMYLGEFSITYKPVRHGRPGIGSTASARFIPL 441
+T EQ+ E++KKRTF+KF FRG+DL+KLLDLS +FMELVHARARRRM+RGLKRKPMALIKRLRKAKK A P EKPRGIKTHLRNM+IVPEMIGSIVGIYNGKS NGVEIKPEMVG YLGEFSITYKPVRHGRPGIGST S+RFIPL
Sbjct: 38 LTSEQVAEMRKKRTFRKFTFRGVDLDKLLDLSMEEFMELVHARARRRMSRGLKRKPMALIKRLRKAKKNAAPGEKPRGIKTHLRNMLIVPEMIGSIVGIYNGKSMNGVEIKPEMVGHYLGEFSITYKPVRHGRPGIGSTNSSRFIPL 184
BLAST of mRNA_C-australica_Contig_1038.2.1 vs. uniprot
Match: A0A3S3NW43_9ACAR (40S ribosomal protein S15 n=3 Tax=Arachnida TaxID=6854 RepID=A0A3S3NW43_9ACAR) HSP 1 Score: 225 bits (574), Expect = 1.890e-73 Identity = 108/141 (76.60%), Postives = 131/141 (92.91%), Query Frame = 1
Query: 19 MEIKKKRTFKKFMFRGIDLEKLLDLSTADFMELVHARARRRMTRGLKRKPMALIKRLRKAKKAAGPMEKPRGIKTHLRNMIIVPEMIGSIVGIYNGKSFNGVEIKPEMVGMYLGEFSITYKPVRHGRPGIGSTASARFIPL 441
+E+KKKRTF+K+ +RG+DL++LLD+ST MEL HARARRR+TRGLKRKPMAL+K+LRKAKKAAGP+EKP +KTHLR+MII+PEM+GSIVG+YNGK+FN VEIKPEM+G YLGEFSITYKPV+HGRPGIG+T S+RFIPL
Sbjct: 8 LELKKKRTFRKYTYRGVDLDQLLDMSTKQLMELFHARARRRLTRGLKRKPMALLKKLRKAKKAAGPLEKPEVVKTHLRDMIILPEMVGSIVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPL 148
BLAST of mRNA_C-australica_Contig_1038.2.1 vs. uniprot
Match: A0A6P7T9Z9_OCTVU (40S ribosomal protein S15 n=4 Tax=Coleoidea TaxID=6606 RepID=A0A6P7T9Z9_OCTVU) HSP 1 Score: 225 bits (573), Expect = 2.960e-73 Identity = 112/142 (78.87%), Postives = 128/142 (90.14%), Query Frame = 1
Query: 16 IMEIKKKRTFKKFMFRGIDLEKLLDLSTADFMELVHARARRRMTRGLKRKPMALIKRLRKAKKAAGPMEKPRGIKTHLRNMIIVPEMIGSIVGIYNGKSFNGVEIKPEMVGMYLGEFSITYKPVRHGRPGIGSTASARFIPL 441
++E KKKRTF+K+ +RG+DL++LLD+S+ MEL H RARRR TRGLKRKPMALIKRLRKAKK AGP+EKP +KTHLRNMIIVPEMIGSIVGIYNGKSFN VEIKPEM+G YLGEFSITYKPV+HGRPGIG+T S+RFIPL
Sbjct: 10 LIEKKKKRTFRKYTYRGVDLDQLLDMSSEQLMELFHCRARRRFTRGLKRKPMALIKRLRKAKKKAGPLEKPEVVKTHLRNMIIVPEMIGSIVGIYNGKSFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPL 151
BLAST of mRNA_C-australica_Contig_1038.2.1 vs. uniprot
Match: B8BXM5_THAPS (RS15B, ribosomal protein 15B 40S small ribosomal subunit n=20 Tax=Bacillariophyta TaxID=2836 RepID=B8BXM5_THAPS) HSP 1 Score: 220 bits (561), Expect = 1.690e-71 Identity = 113/147 (76.87%), Postives = 127/147 (86.39%), Query Frame = 1
Query: 1 MTPEQIMEIKKKRTFKKFMFRGIDLEKLLDLSTADFMELVHARARRRMTRGLKRKPMALIKRLRKAKKAAGPMEKPRGIKTHLRNMIIVPEMIGSIVGIYNGKSFNGVEIKPEMVGMYLGEFSITYKPVRHGRPGIGSTASARFIPL 441
M E + E++KKRTFKKF FRGI+L+ LLDL+ + M+LV ARARRRM+RGLKRKPMALIKRLR+AKK A P EKPRGIKTHLRNMIIVPEMIGSIVGIYNGK F GVE+KPEMVGMYLGEF+ITYKPVRHGRPG+ + RFIPL
Sbjct: 1 MDAETVSELRKKRTFKKFTFRGIELDALLDLTNDELMDLVTARARRRMSRGLKRKPMALIKRLRQAKKEAEPGEKPRGIKTHLRNMIIVPEMIGSIVGIYNGKMFCGVEMKPEMVGMYLGEFAITYKPVRHGRPGVSAAHQTRFIPL 147
BLAST of mRNA_C-australica_Contig_1038.2.1 vs. uniprot
Match: A0A1Y1XXF2_9FUNG (Ribosomal protein S19 n=5 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XXF2_9FUNG) HSP 1 Score: 220 bits (561), Expect = 1.930e-71 Identity = 107/141 (75.89%), Postives = 126/141 (89.36%), Query Frame = 1
Query: 19 MEIKKKRTFKKFMFRGIDLEKLLDLSTADFMELVHARARRRMTRGLKRKPMALIKRLRKAKKAAGPMEKPRGIKTHLRNMIIVPEMIGSIVGIYNGKSFNGVEIKPEMVGMYLGEFSITYKPVRHGRPGIGSTASARFIPL 441
+EIKKKRTF+K+ +RG+DL++LLDLS+ FMELVH RARR+ RGLKRKPM LIK+LRKAKK A P EKP +KTHLRNMIIVPEMIGS+VG+YNGK+FN VEIKPEM+G YLGEFSITYKPV+HGRPGIG+T S+RF+PL
Sbjct: 10 VEIKKKRTFRKYSYRGVDLDQLLDLSSEQFMELVHCRARRKFNRGLKRKPMGLIKKLRKAKKEAAPNEKPETVKTHLRNMIIVPEMIGSVVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATNSSRFVPL 150
BLAST of mRNA_C-australica_Contig_1038.2.1 vs. uniprot
Match: A0A7D9HQD6_PARCT (40S ribosomal protein S15 n=4 Tax=Alcyonacea TaxID=40677 RepID=A0A7D9HQD6_PARCT) HSP 1 Score: 220 bits (561), Expect = 3.620e-71 Identity = 105/141 (74.47%), Postives = 129/141 (91.49%), Query Frame = 1
Query: 19 MEIKKKRTFKKFMFRGIDLEKLLDLSTADFMELVHARARRRMTRGLKRKPMALIKRLRKAKKAAGPMEKPRGIKTHLRNMIIVPEMIGSIVGIYNGKSFNGVEIKPEMVGMYLGEFSITYKPVRHGRPGIGSTASARFIPL 441
+++KKKRTF+KF +RG+DL++LLDL + + MELVHARARRR +RGLKRKP+ALIK+LRKAKK A PMEKP +KTHLRNMI+VPEMIGS++G+YNGK+FN +EIKPEM+G YLGEFSITYKPV+HGRPGIG+T S+RFIPL
Sbjct: 29 VQVKKKRTFRKFTYRGVDLDQLLDLQSDNLMELVHARARRRFSRGLKRKPLALIKKLRKAKKEAPPMEKPEVVKTHLRNMIVVPEMIGSVIGVYNGKTFNQIEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPL 169
BLAST of mRNA_C-australica_Contig_1038.2.1 vs. uniprot
Match: A0A0L0HJM2_SPIPD (40S ribosomal protein S15 n=3 Tax=Spizellomycetales TaxID=34478 RepID=A0A0L0HJM2_SPIPD) HSP 1 Score: 219 bits (559), Expect = 4.020e-71 Identity = 110/144 (76.39%), Postives = 126/144 (87.50%), Query Frame = 1
Query: 10 EQIMEIKKKRTFKKFMFRGIDLEKLLDLSTADFMELVHARARRRMTRGLKRKPMALIKRLRKAKKAAGPMEKPRGIKTHLRNMIIVPEMIGSIVGIYNGKSFNGVEIKPEMVGMYLGEFSITYKPVRHGRPGIGSTASARFIPL 441
E E+KKKRTF+KF FRG+DL++LLDLS+ MELVHARARRR RGLKRKPM LIK+LRKAKK A P EKP +KTHLR+MIIVPEMIGS+VG+YNGK+FN VEIKPEM+G YLGEFSITYKPV+HGRPGIG+T S+RFIPL
Sbjct: 8 ESAAELKKKRTFRKFTFRGVDLDQLLDLSSEQLMELVHARARRRFQRGLKRKPMGLIKKLRKAKKEATPGEKPEVVKTHLRDMIIVPEMIGSVVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPL 151
BLAST of mRNA_C-australica_Contig_1038.2.1 vs. uniprot
Match: A0A2R5H003_9STRA (30S ribosomal protein S19, chloroplastic n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H003_9STRA) HSP 1 Score: 219 bits (558), Expect = 8.210e-71 Identity = 110/147 (74.83%), Postives = 128/147 (87.07%), Query Frame = 1
Query: 1 MTPEQIMEIKKKRTFKKFMFRGIDLEKLLDLSTADFMELVHARARRRMTRGLKRKPMALIKRLRKAKKAAGPMEKPRGIKTHLRNMIIVPEMIGSIVGIYNGKSFNGVEIKPEMVGMYLGEFSITYKPVRHGRPGIGSTASARFIPL 441
+T E+ E+KKKRTFKKF +RGIDL+KLLDL+ + M++V ARARRR RGLKRKPMALIK+LRKAKK GPMEKP +KTHLRNMIIVPEMIGS+VG+YNGK+F VEIKPEM+G YLGEFSITYKP+ HGRPGIG+T S+RFIPL
Sbjct: 17 LTLEEQAELKKKRTFKKFSYRGIDLDKLLDLTHEELMKMVKARARRRFNRGLKRKPMALIKKLRKAKKETGPMEKPEIVKTHLRNMIIVPEMIGSMVGVYNGKTFTTVEIKPEMIGHYLGEFSITYKPITHGRPGIGATNSSRFIPL 163
BLAST of mRNA_C-australica_Contig_1038.2.1 vs. uniprot
Match: A0A443SLK7_9ACAR (40S ribosomal protein S15 n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SLK7_9ACAR) HSP 1 Score: 218 bits (556), Expect = 1.040e-70 Identity = 104/141 (73.76%), Postives = 129/141 (91.49%), Query Frame = 1
Query: 19 MEIKKKRTFKKFMFRGIDLEKLLDLSTADFMELVHARARRRMTRGLKRKPMALIKRLRKAKKAAGPMEKPRGIKTHLRNMIIVPEMIGSIVGIYNGKSFNGVEIKPEMVGMYLGEFSITYKPVRHGRPGIGSTASARFIPL 441
+E+KKKRTF+K+ +RG+DL++LLD++T EL HARARRR+ RGLKRKPMAL+K+LRKAKKAAGP+EKP +KTHLR+MII+PEM+GS+VG+YNGK+FN VEIKPEM+G YLGEFSITYKPV+HGRPGIG+T S+RFIPL
Sbjct: 8 LELKKKRTFRKYTYRGVDLDQLLDMNTKQLTELFHARARRRLNRGLKRKPMALMKKLRKAKKAAGPLEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPL 148 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1038.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1038.2.1 >prot_C-australica_Contig_1038.2.1 ID=prot_C-australica_Contig_1038.2.1|Name=mRNA_C-australica_Contig_1038.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=148bp MTPEQIMEIKKKRTFKKFMFRGIDLEKLLDLSTADFMELVHARARRRMTRback to top mRNA from alignment at C-australica_Contig_1038:4076..5619+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1038.2.1 ID=mRNA_C-australica_Contig_1038.2.1|Name=mRNA_C-australica_Contig_1038.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1544bp|location=Sequence derived from alignment at C-australica_Contig_1038:4076..5619+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1038:4076..5619+ >mRNA_C-australica_Contig_1038.2.1 ID=mRNA_C-australica_Contig_1038.2.1|Name=mRNA_C-australica_Contig_1038.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=444bp|location=Sequence derived from alignment at C-australica_Contig_1038:4076..5619+ (Chrysoparadoxa australica CS_1217)back to top |