mRNA_C-australica_Contig_1038.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1038.1.1
Unique NamemRNA_C-australica_Contig_1038.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1038.1.1 vs. uniprot
Match: A0A6H5KDR8_9PHAE (Peptidase_M14 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KDR8_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 5.710e-74
Identity = 119/234 (50.85%), Postives = 167/234 (71.37%), Query Frame = 1
Query:  343 EVFTAQERYGVPSPGDCGQP----CQQWILHITNLDTLKSDQARPEVFLSGCLHGNERIGPTTVVEVAELLLQASVCYSNNEASECQEDKLLAGDPETVAWLAHLVETRNIYIMPTANAWGYYHDKREENGVDPNRDFPFNQAPSACMVTSAAR---AINELWREHIFQLSLTFHAGMEAIAYEWGSKNHPHRTEQGGALQDVSPDDDAQVEIGTALSEYAGSFQG----VKPY 1011
            +V++AQ R+G+ SPG C +     C+QW+LHI++ +T+ ++  RPEVF SGCLHG+E++GPT VVE+A+L++ A+VC++++ A EC +D L    PE+V WLA L  TR+  IMP AN+ GYY+  R ENG+DPNRDFP+ Q P  CM T  AR   ++NE+WREH FQL++TFH GM  +AYEWGS +HPHR ++ G   D+SPD +AQ E+   LS++AG F+      KPY
Sbjct:    3 QVYSAQYRFGLRSPGPCSEDGSIRCEQWVLHISDHNTMAAEPERPEVFFSGCLHGDEQVGPTAVVEMAKLMVYAAVCHADSSAKECDDDALRDA-PESVPWLARLALTRSTVIMPMANSIGYYNTDRWENGMDPNRDFPYGQMPQHCMTTITARQRESVNEVWREHAFQLAVTFHGGMVGMAYEWGSPDHPHRQDRKGNWLDISPDHEAQKELTAGLSQFAGGFKENGRTFKPY 235          
BLAST of mRNA_C-australica_Contig_1038.1.1 vs. uniprot
Match: A0A836CRP5_9STRA (Peptidase_M14 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRP5_9STRA)

HSP 1 Score: 250 bits (639), Expect = 6.430e-71
Identity = 129/269 (47.96%), Postives = 171/269 (63.57%), Query Frame = 1
Query:  283 SYNDIIDKLQLFSAKYPGKAEVFTAQERYGVPSPGDCGQ-PCQQWILHITNLDTLKSDQARPEVFLSGCLHGNERIGPTTVVEVAELLLQASVCY-SNNEASECQEDKLLAGDP--ETVAWLAHLVETRNIYIMPTANAWGYYHDKREENGVDPNRDFPFNQ----------------------------APSACMVTSAARAINELWREHIFQLSLTFHAGMEAIAYEWGSKNHPHRTEQGGALQDVSPDDDAQVEIGTALSEYAGSF 993
            +Y  I  +L+  +  YP   EV++AQ+RYG+ SPGDCG+ PCQQW+LHIT+L TL+ D  RPEVF SGCLHG+E +GP T++E A LLL+A+ C  S   A++C+ D  L+G+     V WL+ LV TR+++ MP  NA G+Y  +REE+G+DPNRDFP++Q                              + CM T  ARA+NE+WREH+FQL+LTFH GM AIAYEWG   HP +   GG   D SPDD AQ ++  A+S YAG F
Sbjct:   36 TYAGIEQELEAMAKAYPDYVEVYSAQDRYGIDSPGDCGEKPCQQWVLHITDLATLEEDVQRPEVFFSGCLHGDEVVGPPTLMETAWLLLRAAACARSGGGAADCR-DPTLSGEAGARRVRWLSRLVATRSLWAMPATNALGFYRGRREESGIDPNRDFPYHQDAEQCMQXXXXXXXXXXXXXXXXXXXXXXXALCMQTVTARAVNEVWREHMFQLALTFHGGMVAIAYEWGDLQHPKK---GG--HDASPDDTAQAKLTAAMSAYAGGF 298          
BLAST of mRNA_C-australica_Contig_1038.1.1 vs. uniprot
Match: A0A662Y4J9_9STRA (Peptidase_M14 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4J9_9STRA)

HSP 1 Score: 227 bits (579), Expect = 1.190e-64
Identity = 120/254 (47.24%), Postives = 157/254 (61.81%), Query Frame = 1
Query:  271 FEQLSYNDIIDKLQLFSAKYPGKAEVFTAQERYGVP-------SPGDCGQPCQQWILHITNLDTLKSDQARPEVFLSGCLHGNERIGPTTVVEVAELLLQASVCYSNNEASECQEDKLLAGDPETVAWLAHLVETRNIYIMPTANAWGYYHDKREENGVDPNRDFPFNQAPSACMVTSAARAINELWREHIFQLSLTFHAGMEAIAYEWGSKNHPHRTEQGGALQDVSPDDDAQVEIGTALSEYAGSFQGVKPY 1011
            ++  SY +I+D L    +KYP  AEVF+ Q++YG+P       + G   +PC+Q+++ ITN  +L  D  RPEVF SG LHGNER+GP  VV +AELLL                    A  P+  AW+  LV TR I IMPTANA GY H+ REE GVDPNRDFP+N   S CM + AARA+NELWR+H+FQL++TFHAG   ++YEWG +NH    +Q G+ +  SPDD  Q E+   +S + G FQ  K Y
Sbjct:   31 YKYRSYGEIVDYLLELESKYPEYAEVFSVQDKYGLPQRSELQCTRGSATEPCEQYVIKITNESSLP-DAQRPEVFFSGALHGNERVGPQAVVALAELLLTH------------------ATRPDGNAWIKRLVGTRTIVIMPTANAHGYDHNVREELGVDPNRDFPYNLGNSKCMESMAARALNELWRDHLFQLAITFHAGTRCVSYEWGGENH---VQQSGSSE-KSPDDRGQQELARIMSRFGGVFQEDKTY 261          
BLAST of mRNA_C-australica_Contig_1038.1.1 vs. uniprot
Match: A0A2R5GMQ1_9STRA (Carboxypeptidase D n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMQ1_9STRA)

HSP 1 Score: 229 bits (583), Expect = 2.010e-64
Identity = 122/247 (49.39%), Postives = 156/247 (63.16%), Query Frame = 1
Query:  280 LSYNDIIDKLQLFSAKYPGKAEVFTAQERYGVPSPGDCGQP--CQQWILHITNLDTLKSDQARPEVFLSGCLHGNERIGPTTVVEVAELLLQASVCYSNNEASECQEDKLLAGDPETVAWLAHLVETRNIYIMPTANAWGYYHDKREENGVDPNRDFPFNQAPSACMVTSAARAINELWREHIFQLSLTFHAGMEAIAYEWGSKNHPHRTEQGGALQDVSPDDDAQVEIGTALSEYAGSF-QGVKPY 1011
            L Y DI+D+L      YP   E++ AQ RY +PSPG CG    C+Q++L ITN  TL   + RPEVF SG LHGNER+GPTT++E A LLL++    SN                   AWL  LV TR+IYIMPT NA GYY + R EN +DPNRDFP ++ P +CM T AARA+NELWREH+FQL+LT+H GM+AIA+EWG+  +            +SPDD AQ+ +G+A+S  AG   +G  PY
Sbjct:   62 LDYGDIVDELHRLEKDYPDLVELYDAQARYNLPSPGRCGSHGNCKQYVLRITNEATLPEPE-RPEVFFSGELHGNERVGPTTLMEFARLLLESYTTCSN-------------------AWLQRLVNTRSIYIMPTTNALGYYRNTRTENTIDPNRDFPIDK-PHSCMETIAARAVNELWREHLFQLALTYHGGMQAIAFEWGTLTNRKFP--------ISPDDIAQLMLGSAMSAVAGDLHKGEGPY 279          
BLAST of mRNA_C-australica_Contig_1038.1.1 vs. uniprot
Match: A0A7S1UCR6_9STRA (Hypothetical protein (Fragment) n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCR6_9STRA)

HSP 1 Score: 230 bits (586), Expect = 3.140e-64
Identity = 118/260 (45.38%), Postives = 160/260 (61.54%), Query Frame = 1
Query:  241 AAGAASASHR-FEQLSYNDIIDKLQLFSAKYPGKAEVFTAQERYGVPSPGDCGQ-PCQQWILHITNLDTLKSDQARPEVFLSGCLHGNERIGPTTVVEVAELLLQASVCYSNNEASECQEDKLLAGDPETVAWLAHLVETRNIYIMPTANAWGYYHDKREENGVDPNRDFPFNQAPS-ACMVTSAARAINELWREHIFQLSLTFHAGMEAIAYEWGSKNHPHRTEQGGALQDVSPDDDAQVEIGTALSEYAGSFQGVKPY 1011
            AAGAA A  R F+ LSY +I ++L+  +AKYP  A + TAQERYGV + G+CG  PC+Q+IL ++ +         PE F+SG +HGNER+GP   +E +ELL+  + C       +C +           AWL   + TR +Y+MP  NA GYY + REENGVDPNRDFP++      CM +  AR++NE++R+HIFQLSLTFH+G E+I YEWGS NH       G+  D SPDD AQ ++    S++AG F     Y
Sbjct:   24 AAGAAHAKARHFKNLSYPEIRERLRTLAAKYPQYATLTTAQERYGVGTAGECGDGPCEQFILRLSGVSEEDQPPEMPEGFVSGEVHGNERVGPVAALEASELLVYTAACVDTGAHEDCNKIVEYGLTARERAWLHRTIHTRALYVMPMTNALGYYLNTREENGVDPNRDFPYDYPEGHRCMRSITARSLNEIFRDHIFQLSLTFHSGTESIGYEWGSNNH-------GSGHDTSPDDVAQAQLAAGESDFAGGFSHTFKY 276          
BLAST of mRNA_C-australica_Contig_1038.1.1 vs. uniprot
Match: A0A7S3UYK6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3UYK6_9STRA)

HSP 1 Score: 216 bits (549), Expect = 6.770e-64
Identity = 117/232 (50.43%), Postives = 150/232 (64.66%), Query Frame = 1
Query:  325 KYPGKAEVFTAQERYGVPSPGDCG-QPCQQWILHITNLDTLKSDQA--------RPEVFLSGCLHGNERIGPTTVVEVAELLLQASVCYSNNEASECQEDKLLAGDPETVAWLAHLVETRNIYIMPTANAWGYYHDKREENGVDPNRDFPFNQAPS-ACMVTSAARAINELWREHIFQLSLTFHAGMEAIAYEWGS-KNHPHRTEQGGALQDVSPDDDAQVEIGTALSEYAG 987
            +YP   EV  AQ RYG+ SPG+CG  PC+QWI+ ITN  TL   ++        RPEVF SG LHGNER+GP+T+V   +LLL++   YS  E            +P    WL +LV+TR+IYIMP  NA GYY ++REE+ +DPNRDFP + + S  CM T  ARA+NELWREH+FQL++TFH GM AIAYEWG+     HR ++       SPDD AQ  +G+ALS +AG
Sbjct:    1 EYPHLVEVTDAQSRYGIKSPGECGANPCKQWIVRITNEKTLSKSESSTKDNESQRPEVFFSGELHGNERVGPSTLVVFMKLLLES---YSRKE------------NPNP--WLKYLVDTRSIYIMPMTNALGYYQNRREEHNIDPNRDFPIDLSQSNLCMRTITARAVNELWREHLFQLAITFHGGMRAIAYEWGTVTERTHREKK-------SPDDVAQSALGSALSAFAG 208          
BLAST of mRNA_C-australica_Contig_1038.1.1 vs. uniprot
Match: A0A7S2RZJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RZJ4_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.990e-63
Identity = 123/276 (44.57%), Postives = 170/276 (61.59%), Query Frame = 1
Query:  235 RSAAGAASASHRFEQLSYNDIIDKLQLFSAKYPGKAEVFTAQERYGVPSPG---DC-----GQPCQQWILHITNLDTLKSDQARPEVFLSGCLHGNERIGPTTVVEVAELLLQASVCYSNNEASECQEDKLLAGD--PETVAWLAHLVETRNIYIMPTANAWGYYHDKREENGVDPNRDFPFN-QAPSACMVTSAARAINELWREHIFQLSLTFHAGMEAIAYEWGSKNHPHRTEQGGALQDVSPDDDAQVEIGTALSEYAGSFQGVKPYQVQSQN 1029
            +S +       +++ L   +I+ +L   +  YP  A + ++Q+ +G+P  G   DC     G+ C+ W L I+  D    D   PEVFLSGC+HGNER+GPT V+E A LLL+++ C  N   + C+   L   D   +   W+A LV+TR I I+PTANA GYY + REENGVDPNRDFPF  + PS CM T A R INE++++H+FQLSLTFHAGME +AYEWGS ++       G L  +SPD  AQ EI ++ S+Y GS++    YQV + N
Sbjct:   56 QSKSNKVDQKKKYQLLDSEEIVSRLHWLADNYPKFATLESSQDSFGLPVAGTEQDCPFEKDGKGCKNWFLTISGSD---EDNNLPEVFLSGCVHGNERVGPTAVMETATLLLESAACELNYSEA-CRASLLTESDISDKERLWMARLVQTRRIVIVPTANALGYYQNVREENGVDPNRDFPFEVEDPSKCMQTIAGRTINEIYKKHMFQLSLTFHAGMEVVAYEWGSPSY-------GKL--LSPDHIAQAEIASSYSQYGGSWKQSSNYQVGTMN 318          
BLAST of mRNA_C-australica_Contig_1038.1.1 vs. uniprot
Match: A0A8K1CNK4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNK4_PYTOL)

HSP 1 Score: 221 bits (564), Expect = 9.940e-63
Identity = 115/260 (44.23%), Postives = 151/260 (58.08%), Query Frame = 1
Query:  253 ASASHRFEQLSYNDIIDKLQLFSAKYPGKAEVFTAQERYGVPSPGD-------CGQPCQQWILHITNLDTLKSDQARPEVFLSGCLHGNERIGPTTVVEVAELLLQASVCYSNNEASECQEDKLLAGDPETVAWLAHLVETRNIYIMPTANAWGYYHDKREENGVDPNRDFPFNQAPSACMVTSAARAINELWREHIFQLSLTFHAGMEAIAYEWGSKNHPHRTEQGGALQDVSPDDDAQVEIGTALSEYAGSFQGVKPY 1011
            A A   F   +Y+ I+D +     KYP   EVFTAQERYG+P   +         +PC+ +++ ITN  TL  D  RPEVF SG LHG+ER+GP + + +AELL+                    AG  +  AW+  LV TR I IMPT NA+GY  + REE  VDPNRDFP+++  SAC  + AARA+NE+WR H+FQLS+T+H GM  ++YEWGS NH   +   G+   +SPDD  Q  IG  LS + G FQ    Y
Sbjct:   22 ADAQTAFAYRTYSQIVDAMLALQTKYPQYVEVFTAQERYGLPERSELKCTRNGASEPCKHYVIKITNESTLP-DAQRPEVFFSGALHGDERVGPQSAIALAELLVDH------------------AGRADGNAWIKRLVNTRTIVIMPTTNAYGYDKNTREERSVDPNRDFPYSKTGSACFQSMAARAVNEVWRNHLFQLSITWHGGMRVVSYEWGSYNHALNSNGEGSQ--ISPDDRGQFFIGKGLSRFGGKFQEDSTY 260          
BLAST of mRNA_C-australica_Contig_1038.1.1 vs. uniprot
Match: A0A225V2V5_9STRA (Peptidase_M14 domain-containing protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V2V5_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.070e-62
Identity = 116/265 (43.77%), Postives = 155/265 (58.49%), Query Frame = 1
Query:  238 SAAGAASASHRFEQLSYNDIIDKLQLFSAKYPGKAEVFTAQERYGVPSPGD--CGQ-----PCQQWILHITNLDTLKSDQARPEVFLSGCLHGNERIGPTTVVEVAELLLQASVCYSNNEASECQEDKLLAGDPETVAWLAHLVETRNIYIMPTANAWGYYHDKREENGVDPNRDFPFNQAPSACMVTSAARAINELWREHIFQLSLTFHAGMEAIAYEWGSKNHPHRTEQGGALQDVSPDDDAQVEIGTALSEYAGSFQGVKPY 1011
            S A AA  ++ +++ SY +I+D L      +P  AEVF  Q++Y +P P +  C +     PC Q+++ IT   TL  D  RPE+  SG LHGNER+GP  VV +AELLL  +     N                  +WL HLV+TR I I+PT NA+GY H+ R E GVDPNRDFP+N     CMVT AARA+NELWR+H+FQL +TFHAG E I YEWG+ NH   + +     D SPDD +Q ++   +S + G F+    Y
Sbjct:   18 SYASAAPTTY-YKERSYGEIVDYLLELETNFPDYAEVFNVQDKYDLPRPKELQCNRNNKTVPCDQYVIKITEEATLP-DPERPELIFSGVLHGNERVGPQVVVALAELLLSHASRDDGN------------------SWLQHLVKTRTIVIIPTPNAYGYNHNVRRELGVDPNRDFPYNLDDDQCMVTMAARALNELWRDHLFQLGITFHAGRECITYEWGAHNHVKESNE----SDKSPDDRSQQQLTRIMSRFGGQFEDSGEY 258          
BLAST of mRNA_C-australica_Contig_1038.1.1 vs. uniprot
Match: V9E1K7_PHYPR (Peptidase_M14 domain-containing protein n=1 Tax=Phytophthora parasitica P1569 TaxID=1317065 RepID=V9E1K7_PHYPR)

HSP 1 Score: 215 bits (547), Expect = 1.720e-62
Identity = 118/262 (45.04%), Postives = 159/262 (60.69%), Query Frame = 1
Query:  250 AASASHRFEQLSYNDIIDKLQLFSAKYPGKAEVFTAQERYGVPSPG--DCGQ-----PCQQWILHITNLDTLKSDQARPEVFLSGCLHGNERIGPTTVVEVAELLLQASVCYSNNEASECQEDKLLAGDPETVAWLAHLVETRNIYIMPTANAWGYYHDKREENGVDPNRDFPFNQAPSA-CMVTSAARAINELWREHIFQLSLTFHAGMEAIAYEWGSKNHPHRTEQGGALQDVSPDDDAQVEIGTALSEYAGSFQGVKPY 1011
            A++A   F + SY +I++ L     KY   AEVF+ Q++Y +P     DC +     PC+Q+++ IT+  TL  D  RPE+  SG +HGNER+GP  VV +AELLL     ++N             G+P    WL HLV+TR I I+PTANA+GY H+ REE  VDPNRDFP+N      CMVT+AARA+NELWR+H+FQL +TFHAGME I YEWG KNH   +       + SPDD +Q ++   +S + G F+    Y
Sbjct:   23 ASAAVTTFAERSYGEIVEFLLELETKYEEYAEVFSVQDKYDLPKHKEVDCNRNHKTVPCEQYVIKITDEATLP-DPERPELIFSGAVHGNERVGPQVVVALAELLLS----HANRTD----------GNP----WLQHLVKTRTIVIVPTANAYGYNHNVREELDVDPNRDFPYNLGDDEECMVTTAARALNELWRDHLFQLGITFHAGMECITYEWGGKNHVKES----GKSEKSPDDRSQQQLSRIMSRFGGKFEESGQY 261          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1038.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDR8_9PHAE5.710e-7450.85Peptidase_M14 domain-containing protein n=2 Tax=Ec... [more]
A0A836CRP5_9STRA6.430e-7147.96Peptidase_M14 domain-containing protein n=1 Tax=Tr... [more]
A0A662Y4J9_9STRA1.190e-6447.24Peptidase_M14 domain-containing protein n=2 Tax=No... [more]
A0A2R5GMQ1_9STRA2.010e-6449.39Carboxypeptidase D n=1 Tax=Hondaea fermentalgiana ... [more]
A0A7S1UCR6_9STRA3.140e-6445.38Hypothetical protein (Fragment) n=4 Tax=Phaeomonas... [more]
A0A7S3UYK6_9STRA6.770e-6450.43Hypothetical protein (Fragment) n=1 Tax=Aplanochyt... [more]
A0A7S2RZJ4_9STRA1.990e-6344.57Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A8K1CNK4_PYTOL9.940e-6344.23Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A225V2V5_9STRA1.070e-6243.77Peptidase_M14 domain-containing protein (Fragment)... [more]
V9E1K7_PHYPR1.720e-6245.04Peptidase_M14 domain-containing protein n=1 Tax=Ph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1038contigC-australica_Contig_1038:1783..4046 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FNB3
PFAMsPeptidase_M14
Model size1404
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons8
Evalue2.33e-79
EggNOG OGs28MYZ@1|root,2QUHR@2759|Eukaryota
DescriptionZinc carboxypeptidase
Cds size891
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1038.1.1prot_C-australica_Contig_1038.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1038 2119..3869 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586774.2552962-UTR-C-australica_Contig_1038:1782..21181682586774.2552962-UTR-C-australica_Contig_1038:1782..2118Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1038 1783..2118 -
1682586774.3419096-UTR-C-australica_Contig_1038:3869..40461682586774.3419096-UTR-C-australica_Contig_1038:3869..4046Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1038 3870..4046 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586774.2698371-CDS-C-australica_Contig_1038:2118..22351682586774.2698371-CDS-C-australica_Contig_1038:2118..2235Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1038 2119..2235 -
1682586774.277392-CDS-C-australica_Contig_1038:2303..23571682586774.277392-CDS-C-australica_Contig_1038:2303..2357Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1038 2304..2357 -
1682586774.2854493-CDS-C-australica_Contig_1038:2452..25581682586774.2854493-CDS-C-australica_Contig_1038:2452..2558Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1038 2453..2558 -
1682586774.2939665-CDS-C-australica_Contig_1038:2755..27901682586774.2939665-CDS-C-australica_Contig_1038:2755..2790Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1038 2756..2790 -
1682586774.3027172-CDS-C-australica_Contig_1038:2956..30201682586774.3027172-CDS-C-australica_Contig_1038:2956..3020Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1038 2957..3020 -
1682586774.311528-CDS-C-australica_Contig_1038:3204..33471682586774.311528-CDS-C-australica_Contig_1038:3204..3347Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1038 3205..3347 -
1682586774.3203957-CDS-C-australica_Contig_1038:3423..35251682586774.3203957-CDS-C-australica_Contig_1038:3423..3525Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1038 3424..3525 -
1682586774.3300216-CDS-C-australica_Contig_1038:3599..38691682586774.3300216-CDS-C-australica_Contig_1038:3599..3869Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1038 3600..3869 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1038.1.1

>prot_C-australica_Contig_1038.1.1 ID=prot_C-australica_Contig_1038.1.1|Name=mRNA_C-australica_Contig_1038.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=297bp
MAVLLSSFVTALVLMLMLSRSAAGAASASHRFEQLSYNDIIDKLQLFSAK
YPGKAEVFTAQERYGVPSPGDCGQPCQQWILHITNLDTLKSDQARPEVFL
SGCLHGNERIGPTTVVEVAELLLQASVCYSNNEASECQEDKLLAGDPETV
AWLAHLVETRNIYIMPTANAWGYYHDKREENGVDPNRDFPFNQAPSACMV
TSAARAINELWREHIFQLSLTFHAGMEAIAYEWGSKNHPHRTEQGGALQD
VSPDDDAQVEIGTALSEYAGSFQGVKPYQVQSQNFHSQDQHHQPLS*
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mRNA from alignment at C-australica_Contig_1038:1783..4046-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1038.1.1 ID=mRNA_C-australica_Contig_1038.1.1|Name=mRNA_C-australica_Contig_1038.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2264bp|location=Sequence derived from alignment at C-australica_Contig_1038:1783..4046- (Chrysoparadoxa australica CS_1217)
CTTCGAAGCAGCAGAGAGTGTTAGGAGGGGAAGGGAAAAAGGGAACAACT GACAACGCCTCCGGATGAGAGGAGAGCCCCAAACAACCCTGTAGCCTAGC CTGCTAGCCTGCCTCCTGCCTACAATTTACTCTGAGCGCAATGAGGCTTA TCCCAGCATTACATAGATAGCACCACGATGGCTGTCCTCCTCAGCTCCTT TGTTACTGCTCTCGTCTTGATGCTGATGTTGAGCAGAAGCGCGGCGGGAG CAGCCTCTGCCTCTCACAGATTCGAGCAGCTATCCTACAATGACATCATC GACAAGCTGCAGCTGTTCAGTGCTAAATATCCTGGCAAGGCTGAAGTCTT TACCGCTCAAGAGCGTTATGGGGTACCTTCACCTGGTGATTGTGGCCAGC CATGTCAGCAGTGGATCCTACACATTACTAACCTGGACACTCTTAAGGTA GGCTTGGCCCTAGCTTACCTTGAATCTTTATCTCTTACTGAAACTGAAAA AAACAAACTGAAAAAAAATAGAGTGACCAAGCGCGGCCCGAGGTGTTCTT GAGCGGCTGCTTGCATGGAAACGAACGAATCGGACCTACCACCGTGGTAG AGGTGGCCGAACTTCTACTTCAGGTAGAGTAGAAGAGGGGGAAGAATATG AAATGCCCGCAACACGCTGCTTCACCCTGATATTCCTCATCCATGCCAGG CCTCAGTATGCTACAGCAACAATGAAGCCTCTGAGTGCCAGGAGGACAAG CTCTTGGCAGGGGATCCAGAGACAGTGGCTTGGCTGGCGCACCTAGTGGA GACGCGAAACATTTATATTATGCCCACGGCCAATGCATGGGGGTAAGTGG GTTGCCTGAGGGCCTGGTCAATTTCACCATGAAATGGAGCAAGGCAGTGC ATCAGTGCAGTGTGGTGTTGATTGTCTAGAGAAGATGAAAGCTGCCACCT CTGTGCTTCTCATGCTGATTCATTCAGGGGAAAGAAAGCTTTTTGTTCTG ACAGTGAGCCCAAACTAAACCTGCAGCTATTACCATGATAAGCGAGAGGA GAACGGTGTAGATCCTAACAGGGACTTCCCTTTTAACCAGGTAAGATCTA GGCCATGAGTTGTAAACCCTGACCATATGCTTGACTCTCACACCTTGATC CTTGATCCCTGGTCCCCTGGCATCACCAACCTGTCTACCCCATGGCATAC CCTTGACCTTGAGCCTCTGCATGCTGCTGTTCCGGTGGCCTTCTCTTTCT GCTCAGGCCCCTTCAGCTTGCATGGTCACATCAGCTGCAAGGTGAGGATT GAAGGGATGAAGGCAAAGGATTGCTGCGAGCTCCATCATTGTCCCAGCCT GCTTACGTTTGTGATACCACTGGGACATGCGTAGATCTTTTTTAACGGAA GGCTCAACCGCGTGACAGCAAACGTTGTCTTGACTTCCTCAACCTGATCC CAAACCCAAAGCCTCTACCCTTCTTCACCTCATGCAAGGGCCATCAATGA GCTATGGCGAGAGCACATTTTCCAGCTCTCACTGACATTCCATGCTGGGA TGGAGGCCATTGCCTATGAATGGGGTAGCAAAAACCACCCGCACGTAAGT GGAATATGAAGGGGAGGCCGCAACCTTTTTCCTGCTCACCGACAGCTGCT TGGAGGTTACTGATTTTTTTGCGCCCTTGTCCACATCAGCGTACTGAGCA GGGTGGGGCACTGCAGGACGTCTCACCTGATGATGATGCTCAGGTCTTTT GGCTTGTCCTGCCCTGATTTAGCCCGACCTAACCCAGCATAACCCATCCT CTCCACAATAGGTAGAGATTGGTACAGCATTGAGTGAATACGCTGGGAGC TTTCAGGGTGTGAAGCCCTATCAGGTTCAGAGTCAGAATTTTCACTCACA GGACCAGCACCACCAACCTCTCTCATGAACATATTCACAGATGCCTTTTT TCCCCACTCCTGGTTAGGTCATAACCTGTGTAACCCTTATGCTAGCTGTC ACTTGAGCATCAACTCGCAACATCCTAGCTTGAACACTTCACTCACTCTC CCACTGGTGCACTGCAAATACACAGTAACCACAGCACAAACGAAGCACCA CTATGGTCTTATGCTCTTGTGCTCAATCTCACTTGCGCACACACTCACTG TCATGAGCTGAGCAAATCCTGTAGCTTGGCTTGGCTTGGCTAAGCTAGAC ATAGTCGAGGGCTGGTCACATAGTCAAGCAGTCAAGCAGTTAAGCTCAAG TGCTTGTCTTTCCC
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Coding sequence (CDS) from alignment at C-australica_Contig_1038:1783..4046-

>mRNA_C-australica_Contig_1038.1.1 ID=mRNA_C-australica_Contig_1038.1.1|Name=mRNA_C-australica_Contig_1038.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=891bp|location=Sequence derived from alignment at C-australica_Contig_1038:1783..4046- (Chrysoparadoxa australica CS_1217)
ATGGCTGTCCTCCTCAGCTCCTTTGTTACTGCTCTCGTCTTGATGCTGAT
GTTGAGCAGAAGCGCGGCGGGAGCAGCCTCTGCCTCTCACAGATTCGAGC
AGCTATCCTACAATGACATCATCGACAAGCTGCAGCTGTTCAGTGCTAAA
TATCCTGGCAAGGCTGAAGTCTTTACCGCTCAAGAGCGTTATGGGGTACC
TTCACCTGGTGATTGTGGCCAGCCATGTCAGCAGTGGATCCTACACATTA
CTAACCTGGACACTCTTAAGAGTGACCAAGCGCGGCCCGAGGTGTTCTTG
AGCGGCTGCTTGCATGGAAACGAACGAATCGGACCTACCACCGTGGTAGA
GGTGGCCGAACTTCTACTTCAGGCCTCAGTATGCTACAGCAACAATGAAG
CCTCTGAGTGCCAGGAGGACAAGCTCTTGGCAGGGGATCCAGAGACAGTG
GCTTGGCTGGCGCACCTAGTGGAGACGCGAAACATTTATATTATGCCCAC
GGCCAATGCATGGGGCTATTACCATGATAAGCGAGAGGAGAACGGTGTAG
ATCCTAACAGGGACTTCCCTTTTAACCAGGCCCCTTCAGCTTGCATGGTC
ACATCAGCTGCAAGGGCCATCAATGAGCTATGGCGAGAGCACATTTTCCA
GCTCTCACTGACATTCCATGCTGGGATGGAGGCCATTGCCTATGAATGGG
GTAGCAAAAACCACCCGCACCGTACTGAGCAGGGTGGGGCACTGCAGGAC
GTCTCACCTGATGATGATGCTCAGGTAGAGATTGGTACAGCATTGAGTGA
ATACGCTGGGAGCTTTCAGGGTGTGAAGCCCTATCAGGTTCAGAGTCAGA
ATTTTCACTCACAGGACCAGCACCACCAACCTCTCTCATGA
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