mRNA_C-australica_Contig_10351.1.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_10351.1.1 vs. uniprot
Match: A0A7X4EY85_9PROT (TonB-dependent receptor plug domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7X4EY85_9PROT) HSP 1 Score: 224 bits (572), Expect = 1.450e-64 Identity = 119/212 (56.13%), Postives = 142/212 (66.98%), Query Frame = 1
Query: 22 LAITTPGVIFGGAQAQDAGVVQEDEESVQGV------VYVTARKREENLQDVPVAISAFGEAQLEEQAITELGDLLDASPGMVYNERDGNRSTGFPGVRGVKTFTSPAASQQRISSFIDGMPMVGPQATIPFVDIQGAEVYRGPQSAVFGRSVFAGAVNYTTRKPSLDIMEGGFNAQYGEDGRQAASAWITAPLIEDKLGVLLSGSADKYDG 639
L T G AQ AG ES Q V VTARKREE+L DVPVAISAF EA L + I E+GD+LD + GMVYNERDGNRST +PGVRG+K F ++ R+S+F+D MP+VGPQA+I FVD+ G EVYRGPQSAVFGRSVFAGA+NY R+PSLD G N Q G+DGR S W + P++ED +G +S S D YDG
Sbjct: 172 LLATVVSFFIGMGAAQQAGAQDSTGESGQAQARVLEEVVVTARKREESLIDVPVAISAFTEAALVDAGIDEMGDVLDNTAGMVYNERDGNRSTAYPGVRGIKNFVGGGSA--RVSTFVDSMPVVGPQASIQFVDVAGVEVYRGPQSAVFGRSVFAGALNYILRQPSLDEQAGAINGQLGQDGRSLLSGWYSTPIVEDTVGFYVSASKDSYDG 381
BLAST of mRNA_C-australica_Contig_10351.1.1 vs. uniprot
Match: A0A381UWK2_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381UWK2_9ZZZZ) HSP 1 Score: 146 bits (368), Expect = 7.660e-37 Identity = 83/194 (42.78%), Postives = 115/194 (59.28%), Query Frame = 1
Query: 58 AQAQDAGVVQEDEESVQGVVYVTARKREENLQDVPVAISAFGEAQLEEQAITELGDLLDASPGMVYNERDGNRSTGFPGVRGVKTFTSPAASQQRISSFIDGMPMVGPQATIPFVDIQGAEVYRGPQSAVFGRSVFAGAVNYTTRKPSLDIMEGGFNAQYGEDGRQAASAWITAPLIEDKLGVLLSGSADKYDG 639
A AQ +++E + VTARKREENLQ++PV+IS G ++E I E D + +PG+ + + +G+R+ P VRG+++ + A ++Q++ SFIDGMP+VG Q T+ F DIQ EV+RGPQSA FGRS FAGA+NY TR P + EG N R + + P I D G L S D Y G
Sbjct: 22 AMAQQGAILEE--------IVVTARKREENLQEIPVSISVLGAGLIQEAGIIEPRDFFELTPGLDF-DTNGDRNNATPAVRGIQS-KATATTRQKVMSFIDGMPLVGAQGTMKFSDIQRVEVFRGPQSAAFGRSTFAGAINYVTRDPGAEF-EGSLNIGSSSLARDNITLGLGGP-INDTFGYTLDVSLDSYQG 203
BLAST of mRNA_C-australica_Contig_10351.1.1 vs. uniprot
Match: A0A6L8BE88_9PROT (TonB-dependent receptor n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6L8BE88_9PROT) HSP 1 Score: 145 bits (367), Expect = 1.050e-36 Identity = 77/175 (44.00%), Postives = 110/175 (62.86%), Query Frame = 1
Query: 115 VYVTARKREENLQDVPVAISAFGEAQLEEQAITELGDLLDASPGMVYNERDGNRSTGFPGVRGVKTFTSPAASQQRISSFIDGMPMVGPQATIPFVDIQGAEVYRGPQSAVFGRSVFAGAVNYTTRKPSLDIMEGGFNAQYGEDGRQAASAWITAPLIEDKLGVLLSGSADKYDG 639
+ VTARKREENLQ+VPV+IS ++ ++E I E D + +PG+ + + +G+R+ P VRG++ + A ++Q++ SFIDG+P+VG Q T+ F I+ EV+RGPQSA FGRS FAGA+NY TR P D+ EG + GR + P I D G L + D+YDG
Sbjct: 37 IVVTARKREENLQEVPVSISVISDSLIDEAGIIEPRDFFEMTPGVDF-DTNGDRNNATPAVRGIQA-KATATTRQKVMSFIDGLPLVGAQGTMQFTGIERVEVFRGPQSAAFGRSTFAGAINYVTRDPG-DVFEGDLRVSTSDLGRNYVQLELGGP-INDTFGYTLDVNVDEYDG 207
BLAST of mRNA_C-australica_Contig_10351.1.1 vs. uniprot
Match: A0A6L8BFH4_9PROT (TonB-dependent receptor n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6L8BFH4_9PROT) HSP 1 Score: 138 bits (348), Expect = 3.840e-34 Identity = 82/207 (39.61%), Postives = 121/207 (58.45%), Query Frame = 1
Query: 16 PALAITTPGVIFGGAQAQDAGVVQEDEESVQGVVYVTARKREENLQDVPVAISAFGEAQLEEQAITELGDLLDASPGMVYNERDGNRSTGFPGVRGVKTFTSPAASQQRISSFIDGMPMVGPQATIPFVDIQGAEVYRGPQSAVFGRSVFAGAVNYTTRKPSLDIMEGGFNAQYGEDGRQAASAWITAPLIEDKLGVLLSGSADKYD 636
P +A+ I A QDAG V E+ + VTARKREENLQ+VPV+IS ++E + D+ +A PG+ Y+E +R + P +RGV++ ++ + +Q+I+SFIDG+P+VG Q T+ + EV+RGPQSA FGR+ F GA+NY TR P D EG + + GR + + P I D +G L+ + D+YD
Sbjct: 8 PLIALFATLFILSPAYGQDAGFVLEE-------IVVTARKREENLQEVPVSISVLSADIIQEAGLINPRDIFEAVPGLDYDENH-DRVSSTPAIRGVQS-SATSVLRQKITSFIDGLPIVGSQGTLQLTGVDRVEVFRGPQSAAFGRATFGGAINYVTRDPG-DEFEGDIRIETSDLGRNSLEILLGGP-ITDIVGYTLNVNLDEYD 203
BLAST of mRNA_C-australica_Contig_10351.1.1 vs. uniprot
Match: A0A661GDP2_9GAMM (Plug domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661GDP2_9GAMM) HSP 1 Score: 137 bits (345), Expect = 1.020e-33 Identity = 82/196 (41.84%), Postives = 119/196 (60.71%), Query Frame = 1
Query: 55 GAQAQDAG-VVQEDEESVQGVVYVTARKREENLQDVPVAISAFGEAQLEEQAITELGDLLDASPGMVYNERDGNRSTGFPGVRGVKTFTSPAASQQRISSFIDGMPMVGPQATIPFVDIQGAEVYRGPQSAVFGRSVFAGAVNYTTRKPSLDIMEGGFNAQYGEDGRQAASAWITAPLIEDKLGVLLSGSADKYDG 639
G AQ+A V E++E V + VT RKREE L+DVPVAI+AF + + E IT L L +A+PG+ ++ G+R++ P +RGV++ ++ Q+++SF+DG+PM G A++ F I EVYRGPQSA FGR+ FAGA+NYTT + + E A+ I+ PL DKLG L+ AD++ G
Sbjct: 66 GVSAQEANEAVLEEDELVLEEIIVTGRKREEALRDVPVAITAFSQDFMIESGITNLQKLYEATPGLTFDTAHGDRNSSQPAIRGVQS-NRVLSTLQKVTSFVDGIPMAGQVASLTFAGIDQVEVYRGPQSAAFGRATFAGAINYTT-SDATEQFEAKIQARASTLDDNELGISISGPL-GDKLGYRLTFIADEFTG 258
BLAST of mRNA_C-australica_Contig_10351.1.1 vs. uniprot
Match: A0A6L8B9B7_9PROT (TonB-dependent receptor n=3 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6L8B9B7_9PROT) HSP 1 Score: 134 bits (337), Expect = 1.230e-32 Identity = 76/183 (41.53%), Postives = 109/183 (59.56%), Query Frame = 1
Query: 82 VQEDEESVQGV---VYVTARKREENLQDVPVAISAFGEAQLEEQAITELGDLLDASPGMVYNERDGNRSTGFPGVRGVKTFTSPAASQQRISSFIDGMPMVGPQATIPFVDIQGAEVYRGPQSAVFGRSVFAGAVNYTTRKPSLDIMEGGFNAQYGEDGRQAASAWITAPLIEDKLGVLLSGS 621
V +DE+ V + VTARKREE+L DVPV+ S F +E+ I L DL + PG+ ++E + +R P +RG++ A ++ +++SF+DG+P++G +I F Q EVYRGPQSA FGRS F GAVNY T P D EG N Y + G + AS + P++ D LG L++ S
Sbjct: 23 VAQDEDEVAPTLEEIVVTARKREESLMDVPVSTSVFSNTLIEDAGIETLYDLYEMVPGLHFDEEE-DRLAALPSIRGIQA-NDVAPNRTKVTSFVDGIPVLGSAGSIGFFGFQQVEVYRGPQSAAFGRSTFGGAVNYVTANPG-DTFEGNVNLNYNDFGTRTASVSVGGPIL-DNLGFLVNYS 201
BLAST of mRNA_C-australica_Contig_10351.1.1 vs. uniprot
Match: A0A6N9FGZ6_9GAMM (TonB-dependent receptor n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A6N9FGZ6_9GAMM) HSP 1 Score: 132 bits (331), Expect = 7.270e-32 Identity = 75/179 (41.90%), Postives = 111/179 (62.01%), Query Frame = 1
Query: 115 VYVTARKREENLQDVPVAISAFGEAQLEEQAITELGDLLDASPGMVYNERDGNRSTGFPGVRGVKTFTSPAA--SQQRISSFIDGMPMVGPQATIPFVDIQGAEVYRGPQSAVFGRSVFAGAVNYTTRKPSLDIMEGGFNAQYGEDGRQAASAWITA--PLIEDKLGVLLSGSADKYDG 639
+ VTARKR+E++QD+P++++AFG QL EQ IT++ D+L PG+ + GNR+ P +R + P++ S Q S+F+DG+ + G + DI+ EV +GPQSA FGR+ F GA+N+ +R P D G N G++GR A AW++A PL+ED+L V SG YDG
Sbjct: 39 IVVTARKRDESIQDIPLSVTAFGSEQLREQQITDVEDMLQFVPGVHMSNHTGNRNN--PAIR-FRAIDPPSSVRSTQTSSAFVDGVYLPGTSQWLSMNDIERVEVVKGPQSAFFGRATFGGAINFISRTPG-DEFNGDINLIVGDNGR--ADAWVSAEGPLVEDRLYVRASGRFYTYDG 211
BLAST of mRNA_C-australica_Contig_10351.1.1 vs. uniprot
Match: A0A2G2JFN0_9GAMM (Plug domain-containing protein n=1 Tax=Oceanobacter sp. TaxID=2030817 RepID=A0A2G2JFN0_9GAMM) HSP 1 Score: 128 bits (321), Expect = 1.590e-30 Identity = 83/208 (39.90%), Postives = 114/208 (54.81%), Query Frame = 1
Query: 25 AITTPGVIFGG-AQAQDAG--VVQEDEESVQGVVYVTARKREENLQDVPVAISAFGEAQLEEQAITELGDLLDASPGMVYNERDGNRSTGFPGVRGVKTFTSPAASQQRISSFIDGMPMVGPQATIPFVDIQGAEVYRGPQSAVFGRSVFAGAVNYTTRKPSLDIMEGGFNAQYGEDGRQAASAWITAPLIEDKLGVLLSGSADKYDG 639
A++ P +I+ A AQ +G +D S V+ VTARKREE L +VPV+ISA QL++ IT+L +L PG V N DG+R P +RGV + T A+ + +++SFIDG+P++G Q F + EV RGPQSA FGRS F GA+NY T PS D E D AS ++ P+I D + + Y G
Sbjct: 22 ALSVPQIIWAPVAHAQTSGEQTATDDSASDGNVIVVTARKREETLTEVPVSISAVNSEQLDQAGITDLTELFATMPG-VENNSDGSRIASKPTIRGVGS-TENASIRAKVTSFIDGVPLIGSQGIGSFAGLAQVEVLRGPQSAAFGRSTFGGAINYVTADPS-DSPEMKIRLGVATDDSYHASVLVSGPIIGDFVKAQATLETQAYGG 226
BLAST of mRNA_C-australica_Contig_10351.1.1 vs. uniprot
Match: A0A6L8BHH4_9PROT (TonB-dependent receptor plug domain-containing protein (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6L8BHH4_9PROT) HSP 1 Score: 125 bits (313), Expect = 3.380e-30 Identity = 76/188 (40.43%), Postives = 108/188 (57.45%), Query Frame = 1
Query: 79 VVQEDEESVQGVVYVTARKREENLQDVPVAISAFGEAQLEEQAITELGDLLDASPGMVYNER-DGNRSTGFPGVRGVKTFTSPAASQQRISSFIDGMPMVGPQATIPFVDIQGAEVYRGPQSAVFGRSVFAGAVNYTTRKPSLDIMEGGFNAQYGEDGRQAASAWITAPLIEDKLGVLLSGSADKYDG 639
V QE E + VTARKREENLQ+VP AIS F L + I DL +PG+ Y+ D N +T P +RGV + A +Q++++F+DGMP++G Q ++PF I EV RGPQSA FGRS F GA+N+TT P D + G+D A ++ P+++ LG L++ + + DG
Sbjct: 23 VSQEGTEFQLEEIVVTARKREENLQEVPGAISVFTGEGLRQAGILSARDLYAYTPGLNYDTGFDQNAAT--PAIRGVVS-NEIATYRQKVTTFLDGMPILGQQGSVPFHTIDQVEVLRGPQSAAFGRSTFGGAINFTTVDPG-DTFAADISVDLGQDSLFNLGAIVSGPIVDGVLGGLIAYESKQRDG 206
BLAST of mRNA_C-australica_Contig_10351.1.1 vs. uniprot
Match: A0A4U0ZDW4_9ALTE (Uncharacterized protein n=1 Tax=Alteromonas portus TaxID=2565549 RepID=A0A4U0ZDW4_9ALTE) HSP 1 Score: 126 bits (317), Expect = 5.480e-30 Identity = 69/176 (39.20%), Postives = 104/176 (59.09%), Query Frame = 1
Query: 115 VYVTARKREENLQDVPVAISAFGEAQLEEQAITELGDLLDASPGMVYNERDGNRSTGFPGVRGVKTFTSPAASQQRISSFIDGMPMVGPQATIPFVDIQGAEVYRGPQSAVFGRSVFAGAVNYTTRKP-SLDIMEGGFNAQYGEDGRQAASAWITAPLIEDKLGVLLSGSADKYDG 639
+ V ARKR E +DVPV++SA +L E +T++ + PG V N DG+R P +RGV + T ++ + ++++FIDG+P+VG Q F +Q EV RGPQS+ FGRS F GA+NY TR P +L +E A G D + S + PL+ED+L + ++ ++ Y G
Sbjct: 54 ILVFARKRGEQEKDVPVSMSAMSSNELAEAGVTDITSMFQLMPG-VENNADGSRIANKPAIRGVGS-TENSSIRAKVTTFIDGIPIVGAQGISSFAGLQQVEVLRGPQSSAFGRSTFGGAINYVTRDPDTLGELEFDVRANIGTDNTRDISLSLITPLVEDRLAMAVTLESNNYGG 227 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10351.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10351.1.1 >prot_C-australica_Contig_10351.1.1 ID=prot_C-australica_Contig_10351.1.1|Name=mRNA_C-australica_Contig_10351.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=213bp MGAVLPALAITTPGVIFGGAQAQDAGVVQEDEESVQGVVYVTARKREENLback to top mRNA from alignment at C-australica_Contig_10351:59..697- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10351.1.1 ID=mRNA_C-australica_Contig_10351.1.1|Name=mRNA_C-australica_Contig_10351.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=639bp|location=Sequence derived from alignment at C-australica_Contig_10351:59..697- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10351:59..697- >mRNA_C-australica_Contig_10351.1.1 ID=mRNA_C-australica_Contig_10351.1.1|Name=mRNA_C-australica_Contig_10351.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=639bp|location=Sequence derived from alignment at C-australica_Contig_10351:59..697- (Chrysoparadoxa australica CS_1217)back to top |