mRNA_C-australica_Contig_10348.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10348.1.1 vs. uniprot
Match: A0A3D5S1R7_9BACT (Alanine racemase n=3 Tax=Bacteria TaxID=2 RepID=A0A3D5S1R7_9BACT) HSP 1 Score: 297 bits (760), Expect = 2.780e-97 Identity = 131/230 (56.96%), Postives = 183/230 (79.57%), Query Frame = 1 Query: 4 IKVDLGYHRTGINPDNPKLIHALAQSNNPEHQLVGLLGHAGHSYTNIDQKSATKIFKASMKAFAKVKAELGRTDLVISYGDTPTCSLLDDFPGVDEIRPGNFVFYDLMQYGFGSCSFEEIAVCMSCPVVAIHPKRKEIILYGGAVHFSKDFINVAGKRNYGLIVKLTPSGWEPSGHSYISKLSQEHGTISASKELLETVKVGDVLGVIPVHSCLTADINGFYYKLNGEKI 693 IK+D+G HRTG++P++ ++I L QS NP+HQLVGL+ HAGH+Y + + A +++ S+ F +VK LGR DL++SYGDTP+CSLLD+FPGVDEIR GNFVFYD+MQ F SC+ EEIAVCM+CPVVAIH +R E+++YGGAVHF+KDFI GKR++G +V LT SGW+ +++ +LSQEHG I AS E++ ++++GD++G++PVHSCLTAD+ G+Y L G+K+ Sbjct: 124 IKLDVGTHRTGVDPNDLEIIERLGQSQNPDHQLVGLMVHAGHTYQPMTKVKAEEVYNESLAYFRRVKEVLGREDLILSYGDTPSCSLLDEFPGVDEIRAGNFVFYDIMQEYFQSCTLEEIAVCMACPVVAIHAERNEVVVYGGAVHFAKDFIQPEGKRSFGTVVTLTESGWKTLPIAHVDRLSQEHGIIKASDEVINSLRIGDLVGILPVHSCLTADLQGYYVSLAGQKL 353
BLAST of mRNA_C-australica_Contig_10348.1.1 vs. uniprot
Match: A0A654E2L1_9BACT (Alanine racemase n=1 Tax=Marinoscillum sp. 108 TaxID=2653151 RepID=A0A654E2L1_9BACT) HSP 1 Score: 281 bits (718), Expect = 6.330e-91 Identity = 124/236 (52.54%), Postives = 174/236 (73.73%), Query Frame = 1 Query: 4 IKVDLGYHRTGINPDNPKLIHALAQSNNPEHQLVGLLGHAGHSYTNIDQKSATKIFKASMKAFAKVKAELGRTDLVISYGDTPTCSLLDDFPGVDEIRPGNFVFYDLMQYGFGSCSFEEIAVCMSCPVVAIHPKRKEIILYGGAVHFSKDFINVAGKRNYGLIVKLTPSGWEPSGHSYISKLSQEHGTISASKELLETVKVGDVLGVIPVHSCLTADINGFYYKLNGEKIMMRTKS 711 IK+D+G HRTG+ PDN I A+A+SN P H L GLL HAGH+Y + ++ A+KI+ S+ AF +V +GR DL+ SYGDTP+CSL+DDF V E+RPGNF FYD+MQ+ FGSC+ E+IAVCM+CPVV+IHP R E+++YGG VHFSKDFI V+ +R +G +V GWE + + + +LSQEHG I S + + +V++GD++G++PVHSC+ AD+ G+Y L G++I K+ Sbjct: 124 IKLDVGTHRTGVMPDNFTEIQAMAKSNQPHHVLKGLLAHAGHTYQPLTREEASKIYHQSLAAFDQVSRAIGRKDLIYSYGDTPSCSLVDDFSAVQELRPGNFAFYDVMQHHFGSCALEDIAVCMACPVVSIHPDRGEVVVYGGGVHFSKDFIQVSDRRVFGTVVSTDGMGWETTPLATVDRLSQEHGIIRGSSDFINSVRIGDLVGILPVHSCMAADLQGYYVSLAGQRIEKLNKA 359
BLAST of mRNA_C-australica_Contig_10348.1.1 vs. uniprot
Match: A0A3D9L2G0_MARFU (D-serine deaminase-like pyridoxal phosphate-dependent protein n=2 Tax=Marinoscillum furvescens TaxID=1026 RepID=A0A3D9L2G0_MARFU) HSP 1 Score: 269 bits (688), Expect = 3.140e-86 Identity = 124/236 (52.54%), Postives = 176/236 (74.58%), Query Frame = 1 Query: 4 IKVDLGYHRTGINPDNPKLIHALAQSNNPEHQLVGLLGHAGHSYTNIDQKSATKIFKASMKAFAKVKAELGRTDLVISYGDTPTCSLLDDFPGVDEIRPGNFVFYDLMQYGFGSCSFEEIAVCMSCPVVAIHPKRKEIILYGGAVHFSKDFINVAGKRNYGLIVKLTPSGWEPSGHSYISKLSQEHGTISASKELLETVKVGDVLGVIPVHSCLTADINGFYYKLNGEKIMMRTKS 711 IKVD+G HRTGI+ + +LI+ LA S NP+H+L G+L HAGH+Y +D +A +F +++ +VK +G+ +L+ISYGDTP+CSLLD+FPG+DE+RPGNFVFYD+MQ+ FGSC+ EIAVCM CPVVAIHP+R E+++YGG VHF+K+ I+ G+ +G +V L+ W+ + + +LSQEHG I AS+E ++ +K+GD++G++PVHSCLTADI Y L+G I KS Sbjct: 138 IKVDVGTHRTGISSTDVELINHLATSANPKHRLKGILAHAGHTYKPLDAHAARVMFDHAIEQLMEVKQAIGQEELIISYGDTPSCSLLDEFPGIDELRPGNFVFYDVMQHYFGSCTLAEIAVCMVCPVVAIHPERCEVVVYGGGVHFAKESISELGENVFGKVVALSGRSWDSFPLARVDRLSQEHGIIKASEEFVQALKIGDLVGILPVHSCLTADIQPHYQALDGTIIEKWNKS 373
BLAST of mRNA_C-australica_Contig_10348.1.1 vs. uniprot
Match: A0A239ERV8_9BACT (D-serine deaminase, pyridoxal phosphate-dependent n=1 Tax=Ekhidna lutea TaxID=447679 RepID=A0A239ERV8_9BACT) HSP 1 Score: 244 bits (623), Expect = 1.380e-76 Identity = 121/240 (50.42%), Postives = 163/240 (67.92%), Query Frame = 1 Query: 4 IKVDLGYHRTGINPDNPKLIHALAQSNNPEHQLVGLLGHAGHSYTNIDQKSATKIFKASMKAFAKVKAELGRTDLVISYGDTPTCSLLDDFPGVDEIRPGNFVFYDLMQYGFGSCSFEEIAVCMSCPVVAIHPKRKEIILYGGAVHFSKDFI---NVAGKRN--YGLIVKLTPSGWEPSGHSYISKLSQEHGTISASKELLETVKVGDVLGVIPVHSCLTADINGFYYKLNGEKIMMRTK 708 IK+D+G HRTGI+P N LI L + + + +G L HAGH+Y D +S IF S+K +++K + G +ISYGDTP+CS++DDF DE+RPGNFVFYD MQ+ GSCS +EIA+C++ PVVAIH +R E+++YGGAVH SK+ I N+ GK + YG +V L+ GWE + + +LSQEHG I S E + VKVGDV+G++PVHSCLTAD+ G Y GE+I TK Sbjct: 124 IKIDVGTHRTGIDPRNGSLIERLVKGASGKSAFIGFLAHAGHTYGCRDFESIKWIFDGSVKVLSELKNKFGG---IISYGDTPSCSIMDDFSFADELRPGNFVFYDFMQHRIGSCSIDEIALCLASPVVAIHKERNEVVVYGGAVHLSKEMIKEKNIFGKEHSCYGKMVTLSGDGWETTVLGNVERLSQEHGIIKLSDEEIARVKVGDVIGILPVHSCLTADLQGHYLSTKGERIEKMTK 360
BLAST of mRNA_C-australica_Contig_10348.1.1 vs. uniprot
Match: A0A1F3IQV3_9BACT (Alanine racemase n=1 Tax=Bacteroidetes bacterium GWF2_33_16 TaxID=1797341 RepID=A0A1F3IQV3_9BACT) HSP 1 Score: 238 bits (606), Expect = 6.350e-74 Identity = 120/235 (51.06%), Postives = 164/235 (69.79%), Query Frame = 1 Query: 4 IKVDLGYHRTGINPDNPKLI-HALAQSNNPEH-QLVGLLGHAGHSYTNIDQKSATKIFKASMKAFAKVKAELGRT--DLVISYGDTPTCSLLDDFPGVDEIRPGNFVFYDLMQYGFGSCSFEEIAVCMSCPVVAIHPKRKEIILYGGAVHFSKDFINVAGKRNYGLIVKLTPSGWEPS-GHSYISKLSQEHGTISASKELLETVKVGDVLGVIPVHSCLTADINGFYYKLNGEKI 693 IK+D GY+RTGI DN LI L ++ N E G L HAGH+Y +K IF S++ +K T +L++SYGDTP+CSL+ DF G++EIRPGNFVFYD MQ+ GSC F++IAVCM+CPVVAIH +R EII++GGAVHFSK+FI + + +G IV L +GW + ++Y++KLSQEHGTI A+++ + T+K+GD++GVIPVHSCLTA++ Y + E I Sbjct: 127 IKIDTGYNRTGIISDNLDLIDQILNETKNSELLNFAGFLTHAGHTYHAKSKKEINHIFNTSIEQLNVLKQRYKNTYPELILSYGDTPSCSLVGDFMGINEIRPGNFVFYDYMQFKLGSCDFDQIAVCMACPVVAIHKERNEIIIHGGAVHFSKEFIENSENKIFGQIVLLDKNGWHKADNNAYLTKLSQEHGTIKATQDFINTIKIGDLIGVIPVHSCLTANLMKGYLTTDNEWI 361
BLAST of mRNA_C-australica_Contig_10348.1.1 vs. uniprot
Match: UPI0012BD5647 (alanine racemase n=1 Tax=Xanthovirga aplysinae TaxID=2529853 RepID=UPI0012BD5647) HSP 1 Score: 235 bits (600), Expect = 4.410e-73 Identity = 121/240 (50.42%), Postives = 156/240 (65.00%), Query Frame = 1 Query: 4 IKVDLGYHRTGINPDNPKLIHALAQSNNPEHQLV--GLLGHAGHSYTNIDQKSATKIFKASMKAFAKVKA--ELGRTDLVISYGDTPTCSLLDDFPGVDEIRPGNFVFYDLMQYGFGSCSFEEIAVCMSCPVVAIHPKRKEIILYGGAVHFSKDFI--NVAGKRNYGLIVKLTPSGWE-PSGHSYISKLSQEHGTISASKELLETVKVGDVLGVIPVHSCLTADINGFYYKLNGEKIMMR 702 +K+D+GYHRTGI P++ KLI + + + G LGHAGHSY K K+ S+ ++KA E +L+IS GDTPTCS +D+F GVDEIRPGNF FYDL Q+ GSC +IAV M+CP+VA H R EII+YGG VHFSKD + GK YG V L + W+ P SY+SK+SQEHGTI ASKE + +VGD++GVIP+HSC+TAD Y GE+I+M+ Sbjct: 123 LKIDVGYHRTGILPNDRKLIDDTLKESKESKNITFSGFLGHAGHSYAAKGDKQIEKVHLQSLSIKKELKAQYESEYPNLMISLGDTPTCSRMDNFQGVDEIRPGNFAFYDLAQWSIGSCDINQIAVAMACPIVAKHSDRNEIIIYGGGVHFSKDRVYNEALGKDFYGFAVPLENNHWKLPDQKSYLSKISQEHGTIKASKEFFNSHEVGDIIGVIPIHSCMTADCMKSYLSTKGERILMK 362
BLAST of mRNA_C-australica_Contig_10348.1.1 vs. uniprot
Match: A0A1F3E737_9BACT (Alanine racemase n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1F3E737_9BACT) HSP 1 Score: 229 bits (584), Expect = 1.380e-70 Identity = 106/234 (45.30%), Postives = 160/234 (68.38%), Query Frame = 1 Query: 4 IKVDLGYHRTGINPDNPKLIHALAQSNNPEH-QLVGLLGHAGHSYTNIDQKSATKIFKASMKAFAKVKAEL--GRTDLVISYGDTPTCSLLDDFPGVDEIRPGNFVFYDLMQYGFGSCSFEEIAVCMSCPVVAIHPKRKEIILYGGAVHFSKDFINVAGKRNYGLIVKLTPSGWE-PSGHSYISKLSQEHGTISASKELLETVKVGDVLGVIPVHSCLTADINGFYYKLNGEKI 693 IK+D GYHRTG+ DN ++I + + E Q G L H+G++Y ++ +I+ + + +K + DL++S GDTP+CS++++ G+DEIRPGNF+FYDL+QY GSC F+++AVCM+CPVVAIH +R E+++YGG VHFSK+ + A +N+G +V L SGW+ P Y+SKLSQEHGTI A+ + + ++K+GD++G+IPVHSC+TA++ Y E I Sbjct: 127 IKIDTGYHRTGLLSDNYQVIDTILEKVCHEKLQFKGFLTHSGNTYQAKTREEIIQIYNNTTEQLTHLKNKFIPSYPDLILSAGDTPSCSIIENLKGIDEIRPGNFIFYDLIQYQLGSCHFDQVAVCMACPVVAIHKERNEVVIYGGGVHFSKESLETAENKNFGQVVLLNDSGWKKPETDCYLSKLSQEHGTIKATDDFINSIKIGDLVGIIPVHSCMTANLMRGYLSTENELI 360
BLAST of mRNA_C-australica_Contig_10348.1.1 vs. uniprot
Match: A0A1F3C8E0_9BACT (Alanine racemase n=1 Tax=Bacteroidetes bacterium GWA2_31_9b TaxID=1797315 RepID=A0A1F3C8E0_9BACT) HSP 1 Score: 226 bits (577), Expect = 1.560e-69 Identity = 111/234 (47.44%), Postives = 161/234 (68.80%), Query Frame = 1 Query: 4 IKVDLGYHRTGINPDNPKLIHALAQSNNPEH-QLVGLLGHAGHSYTNIDQKSATKIFKASMKAFAKVKAEL--GRTDLVISYGDTPTCSLLDDFPGVDEIRPGNFVFYDLMQYGFGSCSFEEIAVCMSCPVVAIHPKRKEIILYGGAVHFSKDFINVAGKRNYGLIVKLTPSGWE-PSGHSYISKLSQEHGTISASKELLETVKVGDVLGVIPVHSCLTADINGFYYKLNGEKI 693 IK+D GYHRTG+ +N +I + + N E Q G L H+G++Y ++ +I S F ++K + +L++SYGDTP+CS++D+F G+DEIRPGNFVFYDLMQ SC+ ++IAVCM+CPVVAIH R EII+YGG VHFSK++I + +G +V LT GW P + Y+SKLSQEHGTISA+ E + ++++GD++GVIP+HSC+TA++ Y + E++ Sbjct: 127 IKIDTGYHRTGLLSENYSVIDDIMEKANHEKLQFKGFLTHSGNTYQAKTKEEIIQISINSTNQFIQLKNKYISKYPELILSYGDTPSCSIVDNFEGIDEIRPGNFVFYDLMQLELESCNIDKIAVCMACPVVAIHKDRNEIIVYGGGVHFSKEYILKDQTKVFGQVVHLTQIGWSNPEKNCYLSKLSQEHGTISATDEFINSIQIGDLIGVIPIHSCMTANLMKEYISTDNEEV 360
BLAST of mRNA_C-australica_Contig_10348.1.1 vs. uniprot
Match: A0A1X7IPE3_9BACT (D-serine deaminase, pyridoxal phosphate-dependent n=1 Tax=Marivirga sericea TaxID=1028 RepID=A0A1X7IPE3_9BACT) HSP 1 Score: 226 bits (575), Expect = 2.700e-69 Identity = 111/237 (46.84%), Postives = 158/237 (66.67%), Query Frame = 1 Query: 4 IKVDLGYHRTGINPDNPKLIHALAQS--NNPEHQLVGLLGHAGHSYTNIDQKSATKIFKASMKAFAKVKAELGRT--DLVISYGDTPTCSLLDDFPGVDEIRPGNFVFYDLMQYGFGSCSFEEIAVCMSCPVVAIHPKRKEIILYGGAVHFSKDFINVAGKRNYGLIVKLTPSGW-EPSGHSYISKLSQEHGTISASKELLETVKVGDVLGVIPVHSCLTADINGFYYKLNGEKIMM 699 +K+D GYHRTG++ +N + I + Q+ +NP + G L HAGH+Y +K KI + + ++K DL+IS GDTPTCS+ ++F +DE+RPGNFVFYD+MQ GSC +E+IAV M+CPVVA HP R E+I+YGGA+HFSKD I G+ YGLI + GW +P ++ KLSQEHGT+ + +++K+GD+L ++P+HSCLTA++ YY L+GE I M Sbjct: 124 LKIDAGYHRTGLDAENFEKIEPILQALKSNPLITIKGFLQHAGHTYRAKGKKEINKIHAHTSEKMIRLKNHFQNQYPDLIISNGDTPTCSVSENFEHIDEMRPGNFVFYDVMQAEIGSCGYEDIAVAMACPVVAKHPDRNEVIIYGGAIHFSKDQIQKDGQTIYGLIAEPERKGWGQPKEGWFVKKLSQEHGTLHVPDQDFDSIKIGDLLYILPIHSCLTANLMSKYYTLDGEGIEM 360
BLAST of mRNA_C-australica_Contig_10348.1.1 vs. uniprot
Match: E4TRX2_MARTH (Alanine racemase domain protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) TaxID=643867 RepID=E4TRX2_MARTH) HSP 1 Score: 224 bits (572), Expect = 7.640e-69 Identity = 112/237 (47.26%), Postives = 153/237 (64.56%), Query Frame = 1 Query: 4 IKVDLGYHRTGINPDNPKLIHALAQSNNPEHQLV--GLLGHAGHSYTNIDQKSATKIFKASMKAFAKVKAELGRT--DLVISYGDTPTCSLLDDFPGVDEIRPGNFVFYDLMQYGFGSCSFEEIAVCMSCPVVAIHPKRKEIILYGGAVHFSKDFINVAGKRNYGLIVKLTPSGW-EPSGHSYISKLSQEHGTISASKELLETVKVGDVLGVIPVHSCLTADINGFYYKLNGEKIMM 699 +K+D GYHRTG++ +N I A+ ++ H + G L HAGH+Y ++ +I + K +K + DL+IS GDTPTCS+ DDF +DE+RPGNFVFYD+MQ GSC +E++AV M+CPVVA H R E+I+YGGAVHFSKD I GK YGLI +GW P ++ KLSQEHGTI E + +K+GD+L ++P+HSCLTA++ YY L+G +I M Sbjct: 124 LKIDAGYHRTGLDAENFAEIEAILKALESNHLITIKGFLQHAGHTYQAKGKQEIDEIHAYTSKQMINLKEHFNQQYPDLMISNGDTPTCSVSDDFEHLDEMRPGNFVFYDIMQAEIGSCQYEDVAVAMTCPVVAKHADRNEVIVYGGAVHFSKDRIEKDGKNIYGLIADKKENGWGNPIAGWFVKKLSQEHGTIHVPDEAFDQIKIGDLLYILPIHSCLTANLMSKYYTLDGHEIEM 360 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10348.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10348.1.1 >prot_C-australica_Contig_10348.1.1 ID=prot_C-australica_Contig_10348.1.1|Name=mRNA_C-australica_Contig_10348.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=238bp IIKVDLGYHRTGINPDNPKLIHALAQSNNPEHQLVGLLGHAGHSYTNIDQback to top mRNA from alignment at C-australica_Contig_10348:5..718+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10348.1.1 ID=mRNA_C-australica_Contig_10348.1.1|Name=mRNA_C-australica_Contig_10348.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=714bp|location=Sequence derived from alignment at C-australica_Contig_10348:5..718+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10348:5..718+ >mRNA_C-australica_Contig_10348.1.1 ID=mRNA_C-australica_Contig_10348.1.1|Name=mRNA_C-australica_Contig_10348.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=714bp|location=Sequence derived from alignment at C-australica_Contig_10348:5..718+ (Chrysoparadoxa australica CS_1217)back to top |