mRNA_C-australica_Contig_10347.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_10347.1.1 vs. uniprot
Match: A0A222E5E9_9RHOB (Uroporphyrinogen-III C-methyltransferase n=7 Tax=Rhodobacterales TaxID=204455 RepID=A0A222E5E9_9RHOB) HSP 1 Score: 293 bits (751), Expect = 4.380e-99 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1 Query: 1 MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSHVRPGADLIGVGKRAGRLSPKQHHVSQLLVEYAQEGGRIVRLKSGDSGLFGRLEEEQVALRAAGIEYEIIPGIPSAVAAAAACGIPLTRRLTARRVQFVTGHDATGE 453
MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSHVRPGADLIGVGKRAGRLSPKQHHVSQLLVEYAQEGGRIVRLKSGDSGLFGRLEEEQVALRAAGIEYEIIPGIPSAVAAAAACGIPLTRRLTARRVQFVTGHDATGE
Sbjct: 1 MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSHVRPGADLIGVGKRAGRLSPKQHHVSQLLVEYAQEGGRIVRLKSGDSGLFGRLEEEQVALRAAGIEYEIIPGIPSAVAAAAACGIPLTRRLTARRVQFVTGHDATGE 151
BLAST of mRNA_C-australica_Contig_10347.1.1 vs. uniprot
Match: A0A238K1Y2_9RHOB (Uroporphyrinogen-III C-methyltransferase n=6 Tax=Rhodobacterales TaxID=204455 RepID=A0A238K1Y2_9RHOB) HSP 1 Score: 271 bits (692), Expect = 4.180e-90 Identity = 138/151 (91.39%), Postives = 143/151 (94.70%), Query Frame = 1 Query: 1 MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSHVRPGADLIGVGKRAGRLSPKQHHVSQLLVEYAQEGGRIVRLKSGDSGLFGRLEEEQVALRAAGIEYEIIPGIPSAVAAAAACGIPLTRRLTARRVQFVTGHDATGE 453
MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPIL+H RPGADLIGVGKRAGR SPKQHHVS LLV+YA+EGGRIVRLKSGD GLFGRLEEE VALR A I YEIIPG+PSAVAAAAACGIPLTRRLTARRVQFVTGHDA+GE
Sbjct: 1 MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILTHARPGADLIGVGKRAGRPSPKQHHVSHLLVDYAREGGRIVRLKSGDGGLFGRLEEELVALREASIPYEIIPGVPSAVAAAAACGIPLTRRLTARRVQFVTGHDASGE 151
BLAST of mRNA_C-australica_Contig_10347.1.1 vs. uniprot
Match: A0A1X7BR40_9RHOB (Uroporphyrinogen-III C-methyltransferase n=1 Tax=Roseovarius aestuarii TaxID=475083 RepID=A0A1X7BR40_9RHOB) HSP 1 Score: 269 bits (687), Expect = 2.040e-89 Identity = 137/150 (91.33%), Postives = 144/150 (96.00%), Query Frame = 1 Query: 1 MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSHVRPGADLIGVGKRAGRLSPKQHHVSQLLVEYAQEGGRIVRLKSGDSGLFGRLEEEQVALRAAGIEYEIIPGIPSAVAAAAACGIPLTRRLTARRVQFVTGHDATG 450
MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPIL+H RPGADL+GVGKRAGR SP+Q HVS+LLV+YAQEGGRIVRLKSGDSGLFGRLEEE VALR AGIEYEIIPG+PSAVAAAAACGIPLTRRLTARRVQFVTGH+A G
Sbjct: 1 MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILTHARPGADLVGVGKRAGRPSPRQDHVSRLLVDYAQEGGRIVRLKSGDSGLFGRLEEELVALRDAGIEYEIIPGVPSAVAAAAACGIPLTRRLTARRVQFVTGHNADG 150
BLAST of mRNA_C-australica_Contig_10347.1.1 vs. uniprot
Match: X6L5P3_9RHOB (Uroporphyrinogen-III C-methyltransferase n=1 Tax=Rhodobacteraceae bacterium PD-2 TaxID=1169855 RepID=X6L5P3_9RHOB) HSP 1 Score: 269 bits (687), Expect = 2.750e-89 Identity = 136/150 (90.67%), Postives = 143/150 (95.33%), Query Frame = 1 Query: 1 MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSHVRPGADLIGVGKRAGRLSPKQHHVSQLLVEYAQEGGRIVRLKSGDSGLFGRLEEEQVALRAAGIEYEIIPGIPSAVAAAAACGIPLTRRLTARRVQFVTGHDATG 450
M+GFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSH RPGADL+GVGKRAGR SPKQ HVS+LLV+YA EGGRIVRLKSGDSGLFGRLEEE VALRAAGI YEIIPG+PSA+ AAAACGIPLTRRLTARRVQFVTGHDA+G
Sbjct: 1 MTGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSHARPGADLVGVGKRAGRPSPKQDHVSRLLVDYASEGGRIVRLKSGDSGLFGRLEEELVALRAAGIPYEIIPGVPSAIGAAAACGIPLTRRLTARRVQFVTGHDASG 150
BLAST of mRNA_C-australica_Contig_10347.1.1 vs. uniprot
Match: A0A1X6ZMA0_9RHOB (Uroporphyrinogen-III C-methyltransferase n=1 Tax=Roseivivax jejudonensis TaxID=1529041 RepID=A0A1X6ZMA0_9RHOB) HSP 1 Score: 266 bits (679), Expect = 3.360e-88 Identity = 135/150 (90.00%), Postives = 141/150 (94.00%), Query Frame = 1 Query: 1 MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSHVRPGADLIGVGKRAGRLSPKQHHVSQLLVEYAQEGGRIVRLKSGDSGLFGRLEEEQVALRAAGIEYEIIPGIPSAVAAAAACGIPLTRRLTARRVQFVTGHDATG 450
MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSH RPGADL+GVGKRAGR SP+QHHVS+LLV+YA EGGRIVRLKSGD GLFGRLEEE VALR AGI YEI+PG+PSAVAAAAA GIPLTRRLTARRVQFVTGHDA G
Sbjct: 1 MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSHARPGADLVGVGKRAGRPSPRQHHVSRLLVDYAAEGGRIVRLKSGDGGLFGRLEEELVALREAGIGYEIVPGVPSAVAAAAAAGIPLTRRLTARRVQFVTGHDAAG 150
BLAST of mRNA_C-australica_Contig_10347.1.1 vs. uniprot
Match: UPI001D0AC44B (uroporphyrinogen-III C-methyltransferase n=1 Tax=Roseobacter sp. H9 TaxID=2763262 RepID=UPI001D0AC44B) HSP 1 Score: 265 bits (678), Expect = 4.770e-88 Identity = 133/151 (88.08%), Postives = 142/151 (94.04%), Query Frame = 1 Query: 1 MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSHVRPGADLIGVGKRAGRLSPKQHHVSQLLVEYAQEGGRIVRLKSGDSGLFGRLEEEQVALRAAGIEYEIIPGIPSAVAAAAACGIPLTRRLTARRVQFVTGHDATGE 453
MSGFVSFVGSGPGDP+LLTLKAVDRLKRADAVLFDDLSSGPIL H R GADL+GVGKRAG SP+QHHVS+LLV+YAQ GGRIVRLKSGDSGLFGRLEEE VALR AGI+YEIIPG+PSA+AAAAACGIPLTRRLTARRVQFVTGHDA G+
Sbjct: 1 MSGFVSFVGSGPGDPDLLTLKAVDRLKRADAVLFDDLSSGPILKHARQGADLVGVGKRAGHPSPRQHHVSRLLVDYAQAGGRIVRLKSGDSGLFGRLEEELVALREAGIDYEIIPGVPSAIAAAAACGIPLTRRLTARRVQFVTGHDANGD 151
BLAST of mRNA_C-australica_Contig_10347.1.1 vs. uniprot
Match: A0A8J8B9A2_9RHOB (Uroporphyrinogen-III C-methyltransferase n=1 Tax=Aestuariicoccus sp. KMU-90 TaxID=2827239 RepID=A0A8J8B9A2_9RHOB) HSP 1 Score: 265 bits (677), Expect = 6.780e-88 Identity = 135/151 (89.40%), Postives = 143/151 (94.70%), Query Frame = 1 Query: 1 MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSHVRPGADLIGVGKRAGRLSPKQHHVSQLLVEYAQEGGRIVRLKSGDSGLFGRLEEEQVALRAAGIEYEIIPGIPSAVAAAAACGIPLTRRLTARRVQFVTGHDATGE 453
MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPIL+H RPGADL+GVGKRAGR SP+Q HVS+LLVEYAQ GGRIVRLKSGDSGLFGRLEEE VALRAAGI YEI+PG+PSAVAAAAA GIPLTRRLTARRVQFVTGHD +G+
Sbjct: 1 MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILAHARPGADLVGVGKRAGRPSPRQDHVSRLLVEYAQGGGRIVRLKSGDSGLFGRLEEELVALRAAGIPYEIVPGVPSAVAAAAAAGIPLTRRLTARRVQFVTGHDISGQ 151
BLAST of mRNA_C-australica_Contig_10347.1.1 vs. uniprot
Match: Q161R2_ROSDO (Uroporphyrinogen-III C-methyltransferase n=3 Tax=Roseobacter TaxID=2433 RepID=Q161R2_ROSDO) HSP 1 Score: 265 bits (677), Expect = 6.780e-88 Identity = 135/151 (89.40%), Postives = 142/151 (94.04%), Query Frame = 1 Query: 1 MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSHVRPGADLIGVGKRAGRLSPKQHHVSQLLVEYAQEGGRIVRLKSGDSGLFGRLEEEQVALRAAGIEYEIIPGIPSAVAAAAACGIPLTRRLTARRVQFVTGHDATGE 453
MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPIL+H R GADL+ VGKRAGR SP Q HVS+LLVEYA+ GGRIVRLKSGDSGLFGRLEEE VALRAAGIEYEIIPG+PSAVAAAAACGIPLTRR TARRVQFVTGHDA+G+
Sbjct: 1 MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILTHARQGADLVSVGKRAGRPSPNQQHVSRLLVEYAEAGGRIVRLKSGDSGLFGRLEEELVALRAAGIEYEIIPGVPSAVAAAAACGIPLTRRFTARRVQFVTGHDASGD 151
BLAST of mRNA_C-australica_Contig_10347.1.1 vs. uniprot
Match: Q28N74_JANSC (Uroporphyrinogen-III C-methyltransferase n=1 Tax=Jannaschia sp. (strain CCS1) TaxID=290400 RepID=Q28N74_JANSC) HSP 1 Score: 264 bits (675), Expect = 1.410e-87 Identity = 136/151 (90.07%), Postives = 143/151 (94.70%), Query Frame = 1 Query: 1 MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSHVRPGADLIGVGKRAGRLSPKQHHVSQLLVEYAQEGGRIVRLKSGDSGLFGRLEEEQVALRAAGIEYEIIPGIPSAVAAAAACGIPLTRRLTARRVQFVTGHDATGE 453
MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSH R GADL+GVGKRAGR SPKQ+HVS+LLV+YAQ G RIVRLKSGDSGLFGRLEEE VALRAAGI YEIIPG+PSA+AAAAA GIPLTRRLTARRVQFVTGHDA+GE
Sbjct: 1 MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSHARSGADLVGVGKRAGRPSPKQNHVSRLLVDYAQTGQRIVRLKSGDSGLFGRLEEELVALRAAGIPYEIIPGVPSAIAAAAAAGIPLTRRLTARRVQFVTGHDASGE 151
BLAST of mRNA_C-australica_Contig_10347.1.1 vs. uniprot
Match: UPI001CD5FC13 (uroporphyrinogen-III C-methyltransferase n=1 Tax=Hasllibacter sp. MH4015 TaxID=2854029 RepID=UPI001CD5FC13) HSP 1 Score: 263 bits (671), Expect = 5.920e-87 Identity = 133/151 (88.08%), Postives = 143/151 (94.70%), Query Frame = 1 Query: 1 MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSHVRPGADLIGVGKRAGRLSPKQHHVSQLLVEYAQEGGRIVRLKSGDSGLFGRLEEEQVALRAAGIEYEIIPGIPSAVAAAAACGIPLTRRLTARRVQFVTGHDATGE 453
MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSH R GADL+GVGKRAGR SP+Q HVS+LLV+YA++GGR+VRLKSGDSGLFGRLEEE VALR AGI YEIIPG+PSA+AAAAA GIPLTRRLTARRVQFVTGHDA+GE
Sbjct: 1 MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSHARSGADLVGVGKRAGRPSPQQRHVSRLLVDYARQGGRVVRLKSGDSGLFGRLEEELVALREAGIPYEIIPGVPSAIAAAAAAGIPLTRRLTARRVQFVTGHDASGE 151 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10347.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10347.1.1 >prot_C-australica_Contig_10347.1.1 ID=prot_C-australica_Contig_10347.1.1|Name=mRNA_C-australica_Contig_10347.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=151bp MSGFVSFVGSGPGDPELLTLKAVDRLKRADAVLFDDLSSGPILSHVRPGAback to top mRNA from alignment at C-australica_Contig_10347:373..825+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10347.1.1 ID=mRNA_C-australica_Contig_10347.1.1|Name=mRNA_C-australica_Contig_10347.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=453bp|location=Sequence derived from alignment at C-australica_Contig_10347:373..825+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10347:373..825+ >mRNA_C-australica_Contig_10347.1.1 ID=mRNA_C-australica_Contig_10347.1.1|Name=mRNA_C-australica_Contig_10347.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=453bp|location=Sequence derived from alignment at C-australica_Contig_10347:373..825+ (Chrysoparadoxa australica CS_1217)back to top |