mRNA_C-australica_Contig_10337.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10337.1.1 vs. uniprot
Match: UPI001CBF7B40 (BamA/TamA family outer membrane protein n=1 Tax=Tateyamaria pelophila TaxID=328415 RepID=UPI001CBF7B40) HSP 1 Score: 376 bits (966), Expect = 1.300e-124 Identity = 193/278 (69.42%), Postives = 222/278 (79.86%), Query Frame = 1 Query: 1 DLLSAAQADYGRIIALLYDAGYFGPTINILVDGREAAGISPVSAPAQIGEIALNVDAGPRFTFGRIGISPRAGATEPTAGFAPGETARVSVLRNATAAHIEGWRQEGHAKARVAGQEITARHPDRAIDASVTLDPGPRLRLGNLSITGESAVREERIREIAGWPSGTVFDPDTLALVQKRLRRTGTFGSANLTEAEIANADGTLDVTATINDQLPRRYSFGAEFGTLDGLTLSGSWLHRNIFGGAERLLVEGEVAGIAGD---TGGTDYSLSAKLSRP 825 ++LSAAQA+Y R I LLYDAG+F P I+ILVDG+EAA ISPVSAP QI ++ + V G RFTFG +GI P++ EP GF G+TARVS +R ATAA IEGWRQ+GHAKARVA QEITARH + +DA VTLDPGPRLR GNL I G+S V E R++EIAGWPSG VFDPDTL VQ RLRRTGTF ++NLTEAE+AN DGTLDVTATINDQLPRRY+FGAE+GT +GLTL GSWLHRNIFG AERLL+EG GI + T G DY LSA+LSRP Sbjct: 63 EVLSAAQAEYRRTIGLLYDAGFFAPEISILVDGKEAALISPVSAPNQIKKVEIIVQPGNRFTFGTVGIGPKSQLAEPVEGFESGQTARVSAMRAATAAQIEGWRQDGHAKARVADQEITARHTNSTLDAIVTLDPGPRLRFGNLYIEGQSKVPEARLQEIAGWPSGDVFDPDTLRKVQTRLRRTGTFSTSNLTEAEVANPDGTLDVTATINDQLPRRYTFGAEYGTDEGLTLEGSWLHRNIFGNAERLLIEGSFGGIGSNNTSTSGLDYLLSARLSRP 340
BLAST of mRNA_C-australica_Contig_10337.1.1 vs. uniprot
Match: A0A1P8MW68_9RHOB (Omp85 domain-containing protein n=5 Tax=Tateyamaria TaxID=299261 RepID=A0A1P8MW68_9RHOB) HSP 1 Score: 373 bits (957), Expect = 2.400e-123 Identity = 184/275 (66.91%), Postives = 218/275 (79.27%), Query Frame = 1 Query: 1 DLLSAAQADYGRIIALLYDAGYFGPTINILVDGREAAGISPVSAPAQIGEIALNVDAGPRFTFGRIGISPRAGATEPTAGFAPGETARVSVLRNATAAHIEGWRQEGHAKARVAGQEITARHPDRAIDASVTLDPGPRLRLGNLSITGESAVREERIREIAGWPSGTVFDPDTLALVQKRLRRTGTFGSANLTEAEIANADGTLDVTATINDQLPRRYSFGAEFGTLDGLTLSGSWLHRNIFGGAERLLVEGEVAGIAGDTGGTDYSLSAKLSRP 825 D++SAAQADY R+I LLYD GYFGPTI+I VDGREAA +SPV+AP + + + VD G FTFG + +SP A TEP APGETA VS LR AT A IEGWRQ+GHAKA V+GQ+I A HP ++A + L+PGPRLRLG L+I G+S VRE+R+REIAGWPSG VFDPDTL LV+KR RRTGTF SA+LTEAE N DGTLDVTA I DQLPRRYSFGAE+GT DGL++S WLHRNIFGGAERL ++GE++G+ GDT G D+ L A+LSRP Sbjct: 59 DVISAAQADYARLIGLLYDKGYFGPTISITVDGREAASLSPVAAPRAVNTVVVTVDPGKVFTFGTVTVSPIATGTEPVFQVAPGETANVSALRTATEAGIEGWRQQGHAKAAVSGQQIIANHPAGQLNADIRLNPGPRLRLGRLNIEGKSNVREKRLREIAGWPSGEVFDPDTLDLVEKRFRRTGTFASASLTEAETPNPDGTLDVTAQITDQLPRRYSFGAEYGTTDGLSVSALWLHRNIFGGAERLQIDGEISGVGGDTEGVDFRLGAQLSRP 333
BLAST of mRNA_C-australica_Contig_10337.1.1 vs. uniprot
Match: UPI001671F7F6 (BamA/TamA family outer membrane protein n=1 Tax=Tateyamaria omphalii TaxID=299262 RepID=UPI001671F7F6) HSP 1 Score: 372 bits (954), Expect = 6.800e-123 Identity = 184/275 (66.91%), Postives = 220/275 (80.00%), Query Frame = 1 Query: 1 DLLSAAQADYGRIIALLYDAGYFGPTINILVDGREAAGISPVSAPAQIGEIALNVDAGPRFTFGRIGISPRAGATEPTAGFAPGETARVSVLRNATAAHIEGWRQEGHAKARVAGQEITARHPDRAIDASVTLDPGPRLRLGNLSITGESAVREERIREIAGWPSGTVFDPDTLALVQKRLRRTGTFGSANLTEAEIANADGTLDVTATINDQLPRRYSFGAEFGTLDGLTLSGSWLHRNIFGGAERLLVEGEVAGIAGDTGGTDYSLSAKLSRP 825 D++SAAQADY R+IALLYD GYFGPTI+I VDG+EAAG+SP+SAP +G + L VD G F+FG + + P A + P+ GETA VS LR+AT+A IEGWR EGHAKA V+GQ+ITA HP ++A V LDPGPRLRLG L + G+SAVRE+RIREIAGWPSG VFDPDTL V+ RLRRTGTF SA LTEAE ANADGTLDVTA I D+LPRRYSFGAE+GT DG+++S WLHRNIFGGAERL ++GE++G+ GDT G D+ L A+LSRP Sbjct: 59 DVISAAQADYTRLIALLYDRGYFGPTISITVDGQEAAGLSPISAPQSVGTVILTVDPGKVFSFGTVTVRPLAPGSTPSPQVQTGETASVSALRDATSAGIEGWRHEGHAKASVSGQQITANHPAGQLNADVRLDPGPRLRLGRLGLEGDSAVREKRIREIAGWPSGEVFDPDTLDKVETRLRRTGTFASATLTEAETANADGTLDVTAQIADRLPRRYSFGAEYGTTDGVSVSALWLHRNIFGGAERLQIDGEISGVGGDTDGVDFRLGAQLSRP 333
BLAST of mRNA_C-australica_Contig_10337.1.1 vs. uniprot
Match: UPI000D55EEE5 (autotransporter assembly complex protein TamA n=1 Tax=Tateyamaria sp. Alg231-49 TaxID=1922219 RepID=UPI000D55EEE5) HSP 1 Score: 353 bits (905), Expect = 1.760e-115 Identity = 173/275 (62.91%), Postives = 212/275 (77.09%), Query Frame = 1 Query: 1 DLLSAAQADYGRIIALLYDAGYFGPTINILVDGREAAGISPVSAPAQIGEIALNVDAGPRFTFGRIGISPRAGATEPTAGFAPGETARVSVLRNATAAHIEGWRQEGHAKARVAGQEITARHPDRAIDASVTLDPGPRLRLGNLSITGESAVREERIREIAGWPSGTVFDPDTLALVQKRLRRTGTFGSANLTEAEIANADGTLDVTATINDQLPRRYSFGAEFGTLDGLTLSGSWLHRNIFGGAERLLVEGEVAGIAGDTGGTDYSLSAKLSRP 825 ++LSAAQADY R+I +LY+ GYF PTI+I VDGRE + +S V+AP I + + V+ G FTFG + I+P A +EP G PG+TARVS LR TAA I+GWR GHAKA V+ Q+ITARHPD+ + A+VT+DPGPRLR G L + ESAVRE+RIREI GW SG VFDPD + V+ R+RRTGTF + LTEAE NADGTLDVTAT++DQLPRRYSFGAEF TLDG+++S WLHRNIFGGAERL ++GE++G G TGG DY L+A LSRP Sbjct: 62 EVLSAAQADYSRLIGVLYEKGYFAPTISIQVDGREVSSLSAVAAPPTIPRVVITVEPGAVFTFGNVTITPEAPTSEPVLGLMPGDTARVSTLRAGTAAQIDGWRHAGHAKAAVSDQKITARHPDKTLSAAVTIDPGPRLRFGELILQSESAVREKRIREIMGWESGEVFDPDHIDDVRTRMRRTGTFAAVTLTEAEEPNADGTLDVTATVSDQLPRRYSFGAEFSTLDGVSVSALWLHRNIFGGAERLQIDGEISGAGGQTGGEDYRLTALLSRP 336
BLAST of mRNA_C-australica_Contig_10337.1.1 vs. uniprot
Match: UPI001CD60E6F (autotransporter assembly complex protein TamA n=1 Tax=Cognatishimia sp. MH4019 TaxID=2854030 RepID=UPI001CD60E6F) HSP 1 Score: 319 bits (818), Expect = 2.750e-102 Identity = 168/275 (61.09%), Postives = 195/275 (70.91%), Query Frame = 1 Query: 1 DLLSAAQADYGRIIALLYDAGYFGPTINILVDGREAAGISPVSAPAQIGEIALNVDAGPRFTFGRIGISPRAGATEPTAGFAPGETARVSVLRNATAAHIEGWRQEGHAKARVAGQEITARHPDRAIDASVTLDPGPRLRLGNLSITGESAVREERIREIAGWPSGTVFDPDTLALVQKRLRRTGTFGSANLTEAEIANADGTLDVTATINDQLPRRYSFGAEFGTLDGLTLSGSWLHRNIFGGAERLLVEGEVAGIAGDTGGTDYSLSAKLSRP 825 ++L+ AQADY R++ +LY+AG FGP I I +DGREAA I P++APA+I + V GP F G+ ISP A TE FA G+TA VS L++ AA IEGWRQ GHAKA V Q+ITARH DRA+D V LDPGPRLR G L I+ ESAVR +RIREIAG P+G VFDPD +A Q RLRRTGTF A LTEAE AN DGTLD+ A I DQ PRR SFGAE +LDGL +S SWLHRN FGGAER + E EV GI G DY L A+LSRP Sbjct: 70 EVLANAQADYARLVTVLYEAGRFGPAITISLDGREAASIPPIAAPARINRAVITVTPGPVFALGQTRISPLARRTELPESFASGQTASVSALQDGVAAAIEGWRQIGHAKAAVDQQQITARHSDRALDVDVRLDPGPRLRFGRLDISSESAVRPDRIREIAGLPTGDVFDPDAVAKSQTRLRRTGTFRVAALTEAETANPDGTLDIEAQITDQPPRRLSFGAEISSLDGLGVSASWLHRNFFGGAERFVAEAEVGGIGAGEEGPDYRLFARLSRP 344
BLAST of mRNA_C-australica_Contig_10337.1.1 vs. uniprot
Match: UPI001F009513 (BamA/TamA family outer membrane protein n=1 Tax=Nereida sp. MMG025 TaxID=2909981 RepID=UPI001F009513) HSP 1 Score: 310 bits (794), Expect = 1.160e-98 Identity = 152/275 (55.27%), Postives = 194/275 (70.55%), Query Frame = 1 Query: 1 DLLSAAQADYGRIIALLYDAGYFGPTINILVDGREAAGISPVSAPAQIGEIALNVDAGPRFTFGRIGISPRAGATEPTAGFAPGETARVSVLRNATAAHIEGWRQEGHAKARVAGQEITARHPDRAIDASVTLDPGPRLRLGNLSITGESAVREERIREIAGWPSGTVFDPDTLALVQKRLRRTGTFGSANLTEAEIANADGTLDVTATINDQLPRRYSFGAEFGTLDGLTLSGSWLHRNIFGGAERLLVEGEVAGIAGDTGGTDYSLSAKLSRP 825 D+L AAQADY R+IA LYD GY+ P I I +DGREAA SPVS P+Q+G + + + GPRF+FG+ ISPRA T GF+ GE A+++++R+A A ++ WR GHAKA VA Q+I ARHP + +D V LDPGP+LR G L +T +SAVR +R+ +IAG P+G F PD L V RLRRTGTF L+EA+ ANADGTLD+ D+LPRR+ FGAE + +GL LSG WLHRN+ GGAERL +E +V GI G +GG DY L A+ SRP Sbjct: 73 DILGAAQADYARLIAALYDEGYYAPVIAITLDGREAATFSPVSPPSQVGTVTITITTGPRFSFGQAQISPRANDDPLTQGFSSGEPAKLTIIRDAVGAEVDHWRDAGHAKADVASQQIAARHPQQELDVRVVLDPGPQLRFGTLVLTNDSAVRTDRLIDIAGLPTGQRFSPDELDRVAARLRRTGTFDVVALSEADSANADGTLDIELQTTDRLPRRFGFGAEISSQEGLELSGFWLHRNLLGGAERLRIEADVGGIGGQSGGEDYELGARFSRP 347
BLAST of mRNA_C-australica_Contig_10337.1.1 vs. uniprot
Match: A0A196QT55_9RHOB (Uncharacterized protein n=6 Tax=Sulfitobacter geojensis TaxID=1342299 RepID=A0A196QT55_9RHOB) HSP 1 Score: 308 bits (788), Expect = 6.730e-98 Identity = 148/275 (53.82%), Postives = 201/275 (73.09%), Query Frame = 1 Query: 1 DLLSAAQADYGRIIALLYDAGYFGPTINILVDGREAAGISPVSAPAQIGEIALNVDAGPRFTFGRIGISPRAGATEPTAGFAPGETARVSVLRNATAAHIEGWRQEGHAKARVAGQEITARHPDRAIDASVTLDPGPRLRLGNLSITGESAVREERIREIAGWPSGTVFDPDTLALVQKRLRRTGTFGSANLTEAEIANADGTLDVTATINDQLPRRYSFGAEFGTLDGLTLSGSWLHRNIFGGAERLLVEGEVAGIAGDTGGTDYSLSAKLSRP 825 ++++AAQADYGR++A+LYD GYFGP I I +DG +AA I V AP QI + ++VD GP+F FG +SP A +TE GFA G+TA +SVL++A AA ++GWR +GHAKA +A Q+++ARH DR ++A++ L PGP+LR G+L ++G AVR +RI +IAG P+G V+ PD L L RLRRTG F + L EA+ TL +TA + + LPRR+ +GAE G+L+GLTLS WLHRN+ GGAERL + GE++GI GD+GG DYSLSA+ RP Sbjct: 62 EVVAAAQADYGRLLAVLYDQGYFGPAITITLDGTDAAAIPAVQAPRQISQAVISVDTGPQFRFGTAKMSPVAASTEIPEGFASGQTASLSVLKDAVAAGVDGWRAQGHAKAALAAQDLSARHTDRTVNATLRLAPGPKLRFGDLQVSGNKAVRRKRIIDIAGLPAGEVYSPDELRLAANRLRRTGAFNAVALIEADKIGPYDTLPITAQVTESLPRRFGYGAELGSLEGLTLSAFWLHRNLLGGAERLRIAGEISGIGGDSGGEDYSLSARFERP 336
BLAST of mRNA_C-australica_Contig_10337.1.1 vs. uniprot
Match: A0A1I2A7W4_9RHOB (Autotransporter secretion outer membrane protein TamA n=2 Tax=Sulfitobacter brevis TaxID=74348 RepID=A0A1I2A7W4_9RHOB) HSP 1 Score: 303 bits (775), Expect = 9.160e-96 Identity = 153/275 (55.64%), Postives = 190/275 (69.09%), Query Frame = 1 Query: 1 DLLSAAQADYGRIIALLYDAGYFGPTINILVDGREAAGISPVSAPAQIGEIALNVDAGPRFTFGRIGISPRAGATEPTAGFAPGETARVSVLRNATAAHIEGWRQEGHAKARVAGQEITARHPDRAIDASVTLDPGPRLRLGNLSITGESAVREERIREIAGWPSGTVFDPDTLALVQKRLRRTGTFGSANLTEAEIANADGTLDVTATINDQLPRRYSFGAEFGTLDGLTLSGSWLHRNIFGGAERLLVEGEVAGIAGDTGGTDYSLSAKLSRP 825 ++++AAQADY R++A+LYD GYFGP INI +DG EAA + PV P Q+ + + GP+F FG I+P A TE GFA G+TA + VL+N +A I GWR++GHAKA + QE+TARH + + A +TL PGP+LR G L +TG SAVR ERI EIAG P GTVFDP L L Q RLRRTG F + L EAE D TL +TA + + LPRR GAE T +GLTLS WLHRN+ GGAERL +E EV+GI GDTGGTDY L+A+ RP Sbjct: 79 EIVAAAQADYARLLAILYDKGYFGPVINITLDGVEAASLPPVQPPLQVSRAVITITPGPQFRFGTARIAPVAPGTELPEGFASGKTASLGVLKNTVSAGITGWREQGHAKAELDRQELTARHKEAILSADLTLAPGPQLRFGPLGVTGNSAVRTERIVEIAGLPQGTVFDPKQLKLAQARLRRTGAFNAVALIEAERIGPDLTLPITAQVTETLPRRIGAGAELSTTEGLTLSTYWLHRNLLGGAERLRLEAEVSGIGGDTGGTDYRLAARFDRP 353
BLAST of mRNA_C-australica_Contig_10337.1.1 vs. uniprot
Match: A0A7W6MC49_9RHOB (Translocation and assembly module TamA n=2 Tax=Sulfitobacter noctilucicola TaxID=1342301 RepID=A0A7W6MC49_9RHOB) HSP 1 Score: 301 bits (771), Expect = 2.810e-95 Identity = 148/275 (53.82%), Postives = 193/275 (70.18%), Query Frame = 1 Query: 1 DLLSAAQADYGRIIALLYDAGYFGPTINILVDGREAAGISPVSAPAQIGEIALNVDAGPRFTFGRIGISPRAGATEPTAGFAPGETARVSVLRNATAAHIEGWRQEGHAKARVAGQEITARHPDRAIDASVTLDPGPRLRLGNLSITGESAVREERIREIAGWPSGTVFDPDTLALVQKRLRRTGTFGSANLTEAEIANADGTLDVTATINDQLPRRYSFGAEFGTLDGLTLSGSWLHRNIFGGAERLLVEGEVAGIAGDTGGTDYSLSAKLSRP 825 ++++AAQADYGR++A+LYD GYFGP I I +DG +AA I PV P I + +N+ GP+F FG I+P A TE FA G+TA +SVL++A + I+GWR +G+AKA ++ Q +TARH D+ I+A + L PGP+LR G L I+G VRE+RIR+IAG P G VF P+ L L RLRRTG F S L EAE D TL +TA I + PRR+ FGAE G+L+GLTLS W+HRN+ GGAERL +EGE+ GI G++GG DYSLSA+ RP Sbjct: 69 EVVAAAQADYGRLLAVLYDQGYFGPVITITLDGTDAAAIPPVQPPRSINQAVINISTGPKFRFGTAKIAPVAPGTEIPEEFAGGQTASLSVLKDAVSEGIDGWRAQGYAKAALSSQTLTARHADQIINADLVLAPGPKLRFGRLQISGNEDVREDRIRDIAGLPEGEVFSPEELRLAATRLRRTGAFSSVALLEAEQIGPDATLPITAQITENAPRRFGFGAELGSLEGLTLSAFWMHRNLLGGAERLRIEGEIKGIGGNSGGEDYSLSARFERP 343
BLAST of mRNA_C-australica_Contig_10337.1.1 vs. uniprot
Match: UPI00168A99DB (autotransporter assembly complex protein TamA n=1 Tax=Sulfitobacter aestuariivivens TaxID=2766981 RepID=UPI00168A99DB) HSP 1 Score: 300 bits (768), Expect = 5.960e-95 Identity = 152/275 (55.27%), Postives = 196/275 (71.27%), Query Frame = 1 Query: 1 DLLSAAQADYGRIIALLYDAGYFGPTINILVDGREAAGISPVSAPAQIGEIALNVDAGPRFTFGRIGISPRAGATEPTAGFAPGETARVSVLRNATAAHIEGWRQEGHAKARVAGQEITARHPDRAIDASVTLDPGPRLRLGNLSITGESAVREERIREIAGWPSGTVFDPDTLALVQKRLRRTGTFGSANLTEAEIANADGTLDVTATINDQLPRRYSFGAEFGTLDGLTLSGSWLHRNIFGGAERLLVEGEVAGIAGDTGGTDYSLSAKLSRP 825 +L++AAQADY R++A+LYD GY+GP + I +DG +AA I PVS PA+I +N+D+GP+F FG I P A TE GFAPG+ A + VL+ AA I GWR +GHAKA +AGQ++TARH DR I A + L PGPRLR G L +TG VR +RI EIAG P+G VF P+ L L Q+RLRRTG F S L EA+ A D TL +TA +++ PRR+ FGAE +L+GLTLS WLHRN+ GGAERL +E EV+GI G++GG DY+L+A+ RP Sbjct: 59 ELVAAAQADYARLLAVLYDNGYYGPVVRITLDGIDAARIPPVSPPAKIDLAVINIDSGPQFRFGSTRIDPVARGTELPEGFAPGQIAELGVLKQTVAAGITGWRDQGHAKAELAGQDVTARHTDRTIIAELQLAPGPRLRFGALRVTGNQNVRTQRIIEIAGLPTGEVFSPEELRLAQRRLRRTGAFESVALIEADQATGD-TLPITAQMSEATPRRFGFGAELSSLEGLTLSTFWLHRNLLGGAERLRLEAEVSGIGGNSGGEDYTLAARFDRP 332 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10337.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10337.1.1 >prot_C-australica_Contig_10337.1.1 ID=prot_C-australica_Contig_10337.1.1|Name=mRNA_C-australica_Contig_10337.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=275bp DLLSAAQADYGRIIALLYDAGYFGPTINILVDGREAAGISPVSAPAQIGEback to top mRNA from alignment at C-australica_Contig_10337:1..825- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10337.1.1 ID=mRNA_C-australica_Contig_10337.1.1|Name=mRNA_C-australica_Contig_10337.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=825bp|location=Sequence derived from alignment at C-australica_Contig_10337:1..825- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10337:1..825- >mRNA_C-australica_Contig_10337.1.1 ID=mRNA_C-australica_Contig_10337.1.1|Name=mRNA_C-australica_Contig_10337.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=825bp|location=Sequence derived from alignment at C-australica_Contig_10337:1..825- (Chrysoparadoxa australica CS_1217)back to top |