mRNA_C-australica_Contig_10328.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10328.1.1 vs. uniprot
Match: X1TZZ0_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1TZZ0_9ZZZZ) HSP 1 Score: 164 bits (414), Expect = 8.350e-47 Identity = 72/135 (53.33%), Postives = 103/135 (76.30%), Query Frame = 1 Query: 181 PHYETIDPHNYNSQQHGDLYGNGVNAKLMAGYMGHYICFPYFGKPNSDFEAESGSGTHGEAFTVKYEVEKELNTES-AVVRASATLPLTKYSINRTITLLQGQSVVLVEEDIEILESFDRPYQWFQNVPFGKPFV 582 PHY+TIDP +YN +H LYG+ ++K+MAGYMGH++CFPY G NS+FE + G G HGEA VK+++++ + ++ A + SATLPL+ YS+ R++T+ GQSVV+VEE++E LE FDRPYQW Q++ FG PF+ Sbjct: 4 PHYKTIDPQDYNPVEHDPLYGSNNDSKVMAGYMGHFLCFPYVGGMNSNFEQQLGFGAHGEAAVVKWDIDQMVTDDNEAAILTSATLPLSSYSVKRSLTMHSGQSVVMVEEEVENLEGFDRPYQWVQHITFGNPFI 138
BLAST of mRNA_C-australica_Contig_10328.1.1 vs. uniprot
Match: A0A7V2HJ09_9BACT (Uncharacterized protein n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A7V2HJ09_9BACT) HSP 1 Score: 152 bits (384), Expect = 3.990e-41 Identity = 76/188 (40.43%), Postives = 115/188 (61.17%), Query Frame = 1 Query: 22 GQVALTKTSFKGREAYALQNDNIRITMLTGGGYIAELSLLSLDQKESINPLFTPHYETIDPHNYNSQQHGDLYGNGVNAKLMAGYMGHYICFPYFGKPNSDFEAESGSGTHGEAFTVKYE-VEKELNTESAVVRASATLPLTKYSINRTITLLQGQSVVLVEEDIEILESFDRPYQWFQNVPFGKPFV 582 G ++L + +F+GR+A+ L+N IR+++L+GGG+IAE LLS D K ++NP+ PHY TIDPH ++ +H +YG G LM+GYMGH +CFP +G P+ + EA +G G HGEA +++ V E + + A L T + + R +T+ G+ + V E + FDRP W Q+ FG PF Sbjct: 23 GGLSLREDAFQGRKAWVLENGLIRVSILSGGGHIAETRLLSADPKVALNPMRVPHYPTIDPHTFDPARHHAIYGAGPGRFLMSGYMGHLLCFPSYGPPSPE-EAAAGLGPHGEAPISEWKKVRVEHGGDRLTLHYGADLRRTLFRVERAVTIRTGKRTIHVRESVHNEAPFDRPVNWMQHATFGPPFA 209
BLAST of mRNA_C-australica_Contig_10328.1.1 vs. uniprot
Match: A0A3N5KWM6_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Acidobacteriales bacterium TaxID=2282142 RepID=A0A3N5KWM6_9BACT) HSP 1 Score: 130 bits (326), Expect = 2.090e-34 Identity = 74/186 (39.78%), Postives = 107/186 (57.53%), Query Frame = 1 Query: 31 ALTKTSFKGREAYALQNDNIRITMLTGGGYIAELSLLSLDQKESINPLFTPHYETIDPHNYNSQQHGDLYGNGVNAKLMAGYMGHYICFPYFGKPNSDFEAESGSGTHGEAFTVKYEVEK--ELNTESAVVRASATLPLTKYSINRTITLLQGQSVVLVEEDIEILESFDRPYQWFQNVPFGKPFV 582 ++ +F+GREAY L+ND IR++++ GGG+I E+ LS D +++INP++ P L AGYMG +CFP+FG P+ D EA G HGEA V+++ + +++ SA L T+Y + RT+TLL G+SVV VEE IE L +FDRP+ Q+ FG PFV Sbjct: 23 SMRSETFQGREAYVLENDKIRVSLIRGGGHIGEIRFLSDDPRKAINPMYIP--------------------------LKAGYMGQLLCFPWFGPPSPD-EARQGLRFHGEAGGVEWKQSQPPKVDDRGVSFSYSADLEKTQYRVERTVTLLTGESVVYVEEWIENLAAFDRPFNRNQHPTFGAPFV 181
BLAST of mRNA_C-australica_Contig_10328.1.1 vs. uniprot
Match: A0A2E5VNW7_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E5VNW7_9PLAN) HSP 1 Score: 130 bits (326), Expect = 1.630e-32 Identity = 69/178 (38.76%), Postives = 108/178 (60.67%), Query Frame = 1 Query: 49 FKGREAYALQNDNIRITMLTGGGYIAELSLLSLDQKESINPLFTPHYETIDPHNYNSQQHGDLYGNGVNAKLMAGYMGHYICFPYFGKPNSDFEAESGSGTHGEAFTVKYEVEKELNTESAVVRASATLPLTKYSINRTITLLQGQSVVLVEEDIEILESFDRPYQWFQNVPFGKPFV 582 F+ R+A+ L+ND +R+++L GGG+IAE+ +L ES++PL+ P + +IDP +++ +H +YG+ A L+AG MGH +CF ++G P S+ E +G HGE +K + + TE + L + +I RT+ LL Q V+ VEE E L S D+P+ W Q+ FG PFV Sbjct: 45 FQNRDAWKLENDRLRVSILEGGGHIAEI-VLKTAAGESVSPLWVPPWPSIDPSTFDADKHSTIYGSNSEASLLAGIMGHNLCFNFWGAP-SEAEFRAGMSFHGEVSILKAQKLTQTGTE---LTHRLDLARSGTTITRTLRLLPNQPVLYVEETAENLSSLDKPFGWVQHPTFGPPFV 217
BLAST of mRNA_C-australica_Contig_10328.1.1 vs. uniprot
Match: A0A7C5I6I4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Solibacter sp. TaxID=2068625 RepID=A0A7C5I6I4_9BACT) HSP 1 Score: 120 bits (301), Expect = 1.530e-31 Identity = 61/126 (48.41%), Postives = 82/126 (65.08%), Query Frame = 1 Query: 4 MVTAVCGQVALTKT-SFK-----GREAYALQNDNIRITMLTGGGYIAELSLLSLDQKESINPLFTPHYETIDPHNYNSQQHGDLYGNGVNAKLMAGYMGHYICFPYFGKPNSDFEAESGSGTHGEA 363 + TA G + +T SF+ GR A+ LQN +RI+ L GGG+I E+ LS D ++S+NP+ PHY+TIDPH Y+ +HG LYG V +LM+GYMG ++CFPYFG P+S E G HGEA Sbjct: 14 LFTAAAGTSLVAQTASFQEDKLHGRRAFVLQNGRMRISTLPGGGFIGEIRFLSPDPRKSVNPMRVPHYQTIDPHTYDVSRHGALYGTDVQRRLMSGYMGDFLCFPYFG-PSSKAEFALDLGQHGEA 138
BLAST of mRNA_C-australica_Contig_10328.1.1 vs. uniprot
Match: A0A7X4AMV1_9BACT (Uncharacterized protein n=1 Tax=Acidobacteriia bacterium TaxID=2081523 RepID=A0A7X4AMV1_9BACT) HSP 1 Score: 123 bits (309), Expect = 4.260e-30 Identity = 65/178 (36.52%), Postives = 104/178 (58.43%), Query Frame = 1 Query: 49 FKGREAYALQNDNIRITMLTGGGYIAELSLLSLDQKESINPLFTPHYETIDPHNYNSQQHGDLYGNGVNAKLMAGYMGHYICFPYFGKPNSDFEAESGSGTHGEAFTVKYEVEKELNTESAVVRASATLPLTKYSINRTITLLQGQSVVLVEEDIEILESFDRPYQWFQNVPFGKPFV 582 F+ R A+ ++ND +R+T+L GGG +AE+ +L D +S+NPL+ P + ++DP ++ +HG++YG A L+AG MGH +CF ++G P S+ E E G HGE + E+ ++ + + L + +I RT+ L GQ V+ VEE DRP+ W Q+ FG PF+ Sbjct: 39 FENRNAWRIENDRLRVTILEGGGQLAEI-VLKTDSGDSLNPLWIPPWPSLDPWEFDVSKHGEIYGTDSEAALLAGIMGHNLCFDFWGAP-SETEYEQGMAYHGEVSLLAAEM---ISHDERSLVHKLDLENSATAITRTMRLADGQPVLYVEETALNKLGLDRPFGWVQHPTFGPPFL 211
BLAST of mRNA_C-australica_Contig_10328.1.1 vs. uniprot
Match: A0A2E5FKU0_9BACT (Uncharacterized protein n=1 Tax=Bryobacterales bacterium TaxID=2026791 RepID=A0A2E5FKU0_9BACT) HSP 1 Score: 122 bits (305), Expect = 7.620e-30 Identity = 72/179 (40.22%), Postives = 103/179 (57.54%), Query Frame = 1 Query: 46 SFKGREAYALQNDNIRITMLTGGGYIAELSLLSLDQKESINPLFTPHYETIDPHNYNSQQHGDLYGNGVNAKLMAGYMGHYICFPYFGKPNSDFEAESGSGTHGEAFTVKYEVEKELNTESAVVRASATLPLTKYSINRTITLLQGQSVVLVEEDIEILESFDRPYQWFQNVPFGKPFV 582 S R LQN+ I +T+L GGG+IAEL L S ++NPL+ P ++TIDP +YN +H + YG+G A+L++G +GH +CF YFG P SD EA SG HGEA V ++ E+ + + A+A LP + I R + L ++V E E L DR W ++V G PF+ Sbjct: 2 SLNHRLTVQLQNEEIYLTLLPGGGHIAELVLKS----NAVNPLWLPPWKTIDPVDYNPTEHTE-YGHGPEAQLLSGIVGHNLCFDYFGPP-SDEEASSGLTVHGEASIVNWKTEQ----QPGKLIATAELPQAEMRIERVLKLAPKAQGIVVTETAENLRGIDRAVGWTEHVTLGPPFL 170
BLAST of mRNA_C-australica_Contig_10328.1.1 vs. uniprot
Match: UPI0012BADBF4 (hypothetical protein n=1 Tax=Bryobacter aggregatus TaxID=360054 RepID=UPI0012BADBF4) HSP 1 Score: 118 bits (295), Expect = 8.030e-29 Identity = 70/179 (39.11%), Postives = 104/179 (58.10%), Query Frame = 1 Query: 46 SFKGREAYALQNDNIRITMLTGGGYIAELSLLSLDQKESINPLFTPHYETIDPHNYNSQQHGDLYGNGVNAKLMAGYMGHYICFPYFGKPNSDFEAESGSGTHGEAFTVKYEVEKELNTESAVVRASATLPLTKYSINRTITLLQGQSVVLVEEDIEILESFDRPYQWFQNVPFGKPFV 582 +++GR+AY L+ND +R+T+L GG+IAEL L + +NPL+TP + TI+P Y+ +QH + YG+ +KL++G MGH C FG P+ + EA +G HGEA V Y+ + A LPL++ + R I L +G V +VE + L FDR W ++V G PFV Sbjct: 5 AYRGRKAYRLENDQLRLTVLAEGGHIAEL----LHRSSGVNPLWTPPWPTIEPSAYSPEQHPE-YGSDAESKLLSGIMGHNWCVDLFGPPSKE-EAAAGYTVHGEASVVAYDKD-----------FKAHLPLSQLDVQRQIAL-EGNRVAIVET-VRNLLPFDRSIAWQEHVTLGPPFV 164
BLAST of mRNA_C-australica_Contig_10328.1.1 vs. uniprot
Match: A0A7V9SJH2_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V9SJH2_9BACT) HSP 1 Score: 118 bits (295), Expect = 1.780e-28 Identity = 69/179 (38.55%), Postives = 106/179 (59.22%), Query Frame = 1 Query: 46 SFKGREAYALQNDNIRITMLTGGGYIAELSLLSLDQKESINPLFTPHYETIDPHNYNSQQHGDLYGNGVNAKLMAGYMGHYICFPYFGKPNSDFEAESGSGTHGEAFTVKYEVEKELNTESAVVRASATLPLTKYSINRTITLLQGQSVVLVEEDIEILESFDRPYQWFQNVPFGKPFV 582 +++GR A +++ND +R+T+L GG++AE+ LD+ +NPL+TP + +I+P Y++ H YG GV+A+L++G MGH +C FG P+++ EA +G HGEA TV YE+ + + + A LPL I R + L GQ+V E IE DR W Q+V G PF+ Sbjct: 6 TYRGRRASSIENDRLRVTVLFEGGHVAEV----LDKGSGMNPLWTPPWPSIEPSTYDAALH-TAYGEGVDARLLSGIMGHNLCADIFGGPSAE-EAAAGLPVHGEASTVLYEI----SADEGELTMQADLPLAGLRIERRLRL-HGQAVSF-RESIENRGGIDRAIGWTQHVTLGPPFL 172
BLAST of mRNA_C-australica_Contig_10328.1.1 vs. uniprot
Match: I3ZB49_TERRK (Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) TaxID=926566 RepID=I3ZB49_TERRK) HSP 1 Score: 117 bits (292), Expect = 5.020e-28 Identity = 65/183 (35.52%), Postives = 103/183 (56.28%), Query Frame = 1 Query: 34 LTKTSFKGREAYALQNDNIRITMLTGGGYIAELSLLSLDQKESINPLFTPHYETIDPHNYNSQQHGDLYGNGVNAKLMAGYMGHYICFPYFGKPNSDFEAESGSGTHGEAFTVKYEVEKELNTESAVVRASATLPLTKYSINRTITLLQGQSVVLVEEDIEILESFDRPYQWFQNVPFGKPFV 582 + KT++ R+A++++ND++R+T+ GG+IAE+ + +NPL+TPH+ T +P + Q +L+GNGV A L+ G +GH C FG P S EA +G HGEA + YE+ ++ NT + +PL + RTITL VL+ E + + +RP W Q+V PF+ Sbjct: 1 MPKTTYLNRKAFSIENDDLRVTVTVEGGHIAEV----FSKAAGVNPLWTPHWTTSEPSEFGPAQE-ELFGNGVEATLLCGILGHNTCLDLFGGP-SPAEAAAGMTAHGEASILPYEITEDGNT----LHCRLPMPLAELDFERTITLHGAD--VLIHEKVINRTAMERPLAWTQHVTLSPPFL 171 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10328.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10328.1.1 >prot_C-australica_Contig_10328.1.1 ID=prot_C-australica_Contig_10328.1.1|Name=mRNA_C-australica_Contig_10328.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=193bp MVTAVCGQVALTKTSFKGREAYALQNDNIRITMLTGGGYIAELSLLSLDQback to top mRNA from alignment at C-australica_Contig_10328:244..825+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10328.1.1 ID=mRNA_C-australica_Contig_10328.1.1|Name=mRNA_C-australica_Contig_10328.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=582bp|location=Sequence derived from alignment at C-australica_Contig_10328:244..825+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10328:244..825+ >mRNA_C-australica_Contig_10328.1.1 ID=mRNA_C-australica_Contig_10328.1.1|Name=mRNA_C-australica_Contig_10328.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=579bp|location=Sequence derived from alignment at C-australica_Contig_10328:244..825+ (Chrysoparadoxa australica CS_1217)back to top |