mRNA_C-australica_Contig_10324.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10324.1.1 vs. uniprot
Match: A0A222E1I4_9RHOB (Acetophenone carboxylase delta subunit n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E1I4_9RHOB) HSP 1 Score: 543 bits (1400), Expect = 1.710e-190 Identity = 271/275 (98.55%), Postives = 272/275 (98.91%), Query Frame = 1 Query: 1 SELPVQVGSIPLVCRAVAKAFEGRVYAEDVFLCNDPVCGGTHLNDVALLRPIFEGDELFCWTVIRAHWLDIGGVAMADLRRAQTDVYGEGLRLAPIKIIEKGQNRQDILDLLFDNFRFQKQQRSDMLSMKAACTVAEKRMRALLSRYGLETFKNCVEELYDRNEQKARKAIMQLQDGVYHGSAFMSAREGDHNYEIKTELKVFGDQLKISLSAPPQLRDVRNSPFGATQAAVYHSAAISLRLKPPFNDGIFRTIEIDYGPL*TIGNAQVPPAAVL 825 +ELPVQVGSIPLVCRAVAKAFEGRVYAEDVFLCNDPVCGGTHLNDVALLRPIFEGDELFCWTVIRAHWLDIGGVAMADLRRAQTDVYGEGLRLAPIKIIEKGQNRQDILDLLFDNFRFQKQQRSDMLSM AACTVAEKRMRALLSRYGLETFKNCVEELYDRNEQKARKAIMQLQDGVYHGSAFMSAREGDHNYEIKTELKVFGDQLKISLSAPPQLRDVRNSPFGATQAAVYHSAAISLRLKPPFNDGIFRTIEIDYGPL TI NAQVPPAAVL Sbjct: 64 AELPVQVGSIPLVCRAVAKAFEGRVYAEDVFLCNDPVCGGTHLNDVALLRPIFEGDELFCWTVIRAHWLDIGGVAMADLRRAQTDVYGEGLRLAPIKIIEKGQNRQDILDLLFDNFRFQKQQRSDMLSMMAACTVAEKRMRALLSRYGLETFKNCVEELYDRNEQKARKAIMQLQDGVYHGSAFMSAREGDHNYEIKTELKVFGDQLKISLSAPPQLRDVRNSPFGATQAAVYHSAAISLRLKPPFNDGIFRTIEIDYGPLGTIVNAQVPPAAVL 338
BLAST of mRNA_C-australica_Contig_10324.1.1 vs. uniprot
Match: A0A2E9Y6U4_9PROT (Hydantoinase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9Y6U4_9PROT) HSP 1 Score: 325 bits (833), Expect = 1.820e-104 Identity = 157/275 (57.09%), Postives = 203/275 (73.82%), Query Frame = 1 Query: 1 SELPVQVGSIPLVCRAVAKAFEGRVYAEDVFLCNDPVCGGTHLNDVALLRPIFEGDELFCWTVIRAHWLDIGGVAMADLRRAQTDVYGEGLRLAPIKIIEKGQNRQDILDLLFDNFRFQKQQRSDMLSMKAACTVAEKRMRALLSRYGLETFKNCVEELYDRNEQKARKAIMQLQDGVYHGSAFMSAREGDHNYEIKTELKVFGDQLKISLSAPPQLRDVRNSPFGATQAAVYHSAAISLRLKPPFNDGIFRTIEIDYGPL*TIGNAQVPPAAVL 825 +ELPV VGSIP VCRAVAKA+EG + D FLCNDP GG HLNDVALLRP+F +EL W VIRAHWLD+GG + DLRRAQ+D YGEG+R+ P+KII G+ D++ L F+N RF +QQ SDML+M AA +A +R+ A+ +YG+ + +E LYD E++ RKAI L DG G +++SAR+GD + +I E+ V GD++ I+LS+P QLR+VRNSPFGAT AAV H+ I+L L+PPFNDG++R ++IDYGP TI NAQVPPA L Sbjct: 90 AELPVHVGSIPFVCRAVAKAYEGDITPGDTFLCNDPAFGGLHLNDVALLRPVFVDNELLFWAVIRAHWLDLGGPSPVDLRRAQSDSYGEGIRIPPLKIIAAGEPCDDVMRLYFNNIRFPEQQHSDMLAMIAAAEIAGRRLAAMSEKYGINVTRAGIEALYDMTERRVRKAITDLPDGSQQGESWLSARKGDDHKKIAAEVTVTGDRMAITLSSPEQLREVRNSPFGATHAAVGHAVTIALGLQPPFNDGLYRALDIDYGPFGTITNAQVPPAPTL 364
BLAST of mRNA_C-australica_Contig_10324.1.1 vs. uniprot
Match: A0A6L8EMH5_9GAMM (Hydantoinase B/oxoprolinase family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8EMH5_9GAMM) HSP 1 Score: 210 bits (534), Expect = 2.390e-60 Identity = 105/270 (38.89%), Postives = 161/270 (59.63%), Query Frame = 1 Query: 4 ELPVQVGSIPLVCRAVAKAFEGRVYAEDVFLCNDPVCGGTHLNDVALLRPIFEGDELFCWTVIRAHWLDIGGVAMADLRRAQTDVYGEGLRLAPIKIIEKGQNRQDILDLLFDNFRFQKQQRSDMLSMKAACTVAEKRMRALLSRYGLETFKNCVEELYDRNEQKARKAIMQLQDGVYHGSAFMS-AREGDHNYEIKTELKVFGDQLKISLSAPPQLRDVRNSPFGATQAAVYHSAAISLRLKPPFNDGIFRTIEIDYGPL*TIGNAQVP 810 ++P +GS+ L RAVA+ F G + D++L NDP G+HL D+ + +P+F DEL W V + H +D+GG +++ EGLR+ PI+++++G+ R D+L+++ NFR +K Q DM + A T+ E+R+ ALL RYG K+CVE+L D E R I L DGVYH S G + ++ E+KV D+L I LS+PPQL NS T + VY + +++PPFN+G++R +++D+GP TI NA+ P Sbjct: 60 DIPTHLGSMVLATRAVARFFAGEINPGDIYLHNDPTYDGSHLPDMCMYKPLFFEDELVFWVVSKGHMVDVGGPVPGSYNPDAKEIFAEGLRVPPIRLVDRGEMRHDVLNMILTNFRSRKFQSGDMNAQLGAITLGEQRLTALLERYGKAVIKDCVEQLLDAAEVHMRARIRTLPDGVYHSSVVAEDTGHGRGHQTLEAEIKVLEDELGIRLSSPPQLDFFTNSYRSNTLSGVYAGLLMWAQVQPPFNEGLYRPVKVDFGPKGTILNAEEP 329
BLAST of mRNA_C-australica_Contig_10324.1.1 vs. uniprot
Match: A0A7W6NLK5_9HYPH (N-methylhydantoinase B n=5 Tax=Hyphomicrobiales TaxID=356 RepID=A0A7W6NLK5_9HYPH) HSP 1 Score: 205 bits (522), Expect = 1.330e-58 Identity = 104/270 (38.52%), Postives = 157/270 (58.15%), Query Frame = 1 Query: 4 ELPVQVGSIPLVCRAVAKAFEGRVYAEDVFLCNDPVCGGTHLNDVALLRPIFEGDELFCWTVIRAHWLDIGGVAMADLRRAQTDVYGEGLRLAPIKIIEKGQNRQDILDLLFDNFRFQKQQRSDMLSMKAACTVAEKRMRALLSRYGLETFKNCVEELYDRNEQKARKAIMQLQDGVYHGSAFMS-AREGDHNYEIKTELKVFGDQLKISLSAPPQLRDVRNSPFGATQAAVYHSAAISLRLKPPFNDGIFRTIEIDYGPL*TIGNAQVP 810 ++P+ +GS+ +AVAK FEG ++ D+ L NDP GG+H D + +P+F EL WTV + H DIGG A ++Y E LR+ P+KI +KG R D+L+ ++ N R ++ Q D ++ AC V E+ + ALL +YG ET C++EL D E+ R + + DG Y GSA + A G ++EIK + + GD I++S+PPQ+ NS G + + VY + L PP+N+G++R + ID+GP TI NAQ P Sbjct: 64 DIPIHLGSLIPAMKAVAKFFEGDIHEGDLILHNDPAFGGSHAIDTCMYKPVFYKGELVYWTVCKGHLTDIGGPVPAGYNPNAKEIYAECLRIPPVKIWDKGVPRNDVLNFIYTNMRARRDQEGDFNALIGACQVGERNLIALLDKYGKETVDACIDELLDMAEKHMRDMMRTVPDGTYEGSAILEDAGHGFGDFEIKATVTITGDNCHIAISSPPQIPYFINSYEGNSHSGVYLGLMMFAALPPPYNEGLYRCVSIDFGPKGTICNAQEP 333
BLAST of mRNA_C-australica_Contig_10324.1.1 vs. uniprot
Match: A0A833HC39_9HYPH (Hydantoinase B/oxoprolinase family protein n=1 Tax=Rhizobiaceae bacterium TaxID=1913961 RepID=A0A833HC39_9HYPH) HSP 1 Score: 203 bits (516), Expect = 1.350e-57 Identity = 103/270 (38.15%), Postives = 158/270 (58.52%), Query Frame = 1 Query: 4 ELPVQVGSIPLVCRAVAKAFEGRVYAEDVFLCNDPVCGGTHLNDVALLRPIFEGDELFCWTVIRAHWLDIGGVAMADLRRAQTDVYGEGLRLAPIKIIEKGQNRQDILDLLFDNFRFQKQQRSDMLSMKAACTVAEKRMRALLSRYGLETFKNCVEELYDRNEQKARKAIMQLQDGVYHGSAFMS-AREGDHNYEIKTELKVFGDQLKISLSAPPQLRDVRNSPFGATQAAVYHSAAISLRLKPPFNDGIFRTIEIDYGPL*TIGNAQVP 810 ++P+ +GS+ +AVAK FEG ++ D+FL NDP GG+H D + +P+F L WTV + H DIGG A A ++Y E LR+ PIKI ++G+ R DIL+++F N R ++ Q D ++ AC V E+ + A+L +YG ET C++EL D ++ R I + DG Y G A + A G ++EIK + + D I++S+PPQ+ NS G + + VY + L PP+N+G++R + +D+GP TI NAQ P Sbjct: 81 DIPIHLGSLIPAMKAVAKFFEGDIHEGDLFLHNDPAFGGSHAIDTCMYKPVFYKGRLVYWTVCKGHLTDIGGPVPAGYNPAAKEIYAECLRIPPIKIWDRGKPRNDILNMIFTNMRARRDQEGDFNALIGACQVGERNLIAMLDKYGKETVDACIDELLDMADRHMRDLIRTVPDGTYEGVAVLEDAGHGFGDFEIKATVTIRKDTCHIAISSPPQIPYFINSYEGNSHSGVYLGLMMFAALPPPYNEGLYRCVSVDFGPKGTICNAQEP 350
BLAST of mRNA_C-australica_Contig_10324.1.1 vs. uniprot
Match: A0A4T1ZWQ5_9RHOB (Hydantoinase B/oxoprolinase family protein n=1 Tax=Paracoccus aeridis TaxID=1966466 RepID=A0A4T1ZWQ5_9RHOB) HSP 1 Score: 195 bits (495), Expect = 1.070e-54 Identity = 95/270 (35.19%), Postives = 157/270 (58.15%), Query Frame = 1 Query: 4 ELPVQVGSIPLVCRAVAKAFEGRVYAEDVFLCNDPVCGGTHLNDVALLRPIFEGDELFCWTVIRAHWLDIGGVAMADLRRAQTDVYGEGLRLAPIKIIEKGQNRQDILDLLFDNFRFQKQQRSDMLSMKAACTVAEKRMRALLSRYGLETFKNCVEELYDRNEQKARKAIMQLQDGVYHGSAFMS-AREGDHNYEIKTELKVFGDQLKISLSAPPQLRDVRNSPFGATQAAVYHSAAISLRLKPPFNDGIFRTIEIDYGPL*TIGNAQVP 810 ++P+ +GS+ ++VA+ FEG ++ D+ L NDP GG+HL D + P+F EL WTV + H DIGG A T++Y EGLR+ P+KI ++G+ R D+L+++ N R ++ Q D ++ AC V + + L+ +YG +T +C++ L D E RK I ++ DG Y G+A + A G +++I + + GD I +S+PPQ+ NS G + + VY + +L PP+N+G++R + D GP+ T+ NA+ P Sbjct: 61 DIPIHLGSLIPAMKSVARYFEGEIHDGDLILHNDPSYGGSHLIDTCMYMPVFHEGELVFWTVCKGHLTDIGGPVPAGYNPNATEIYAEGLRIPPLKIWDRGKPRHDVLNMILMNMRARRDQEGDFNALIGACQVGARNLTNLMKKYGKQTVLDCIDALLDMAEAHMRKLIAEVPDGTYSGTAVLEDAGHGFGDFDITATVTITGDNCHIEVSSPPQIPYFINSYEGNSHSGVYLGLMMFAQLPPPYNEGLYRCVTTDMGPMGTLCNARSP 330
BLAST of mRNA_C-australica_Contig_10324.1.1 vs. uniprot
Match: A0A1H5LBS7_9HYPH (N-methylhydantoinase B n=3 Tax=unclassified Hyphomicrobiales TaxID=41292 RepID=A0A1H5LBS7_9HYPH) HSP 1 Score: 196 bits (498), Expect = 1.100e-54 Identity = 96/270 (35.56%), Postives = 157/270 (58.15%), Query Frame = 1 Query: 4 ELPVQVGSIPLVCRAVAKAFEGRVYAEDVFLCNDPVCGGTHLNDVALLRPIFEGDELFCWTVIRAHWLDIGGVAMADLRRAQTDVYGEGLRLAPIKIIEKGQNRQDILDLLFDNFRFQKQQRSDMLSMKAACTVAEKRMRALLSRYGLETFKNCVEELYDRNEQKARKAIMQLQDGVYHGSAFMS-AREGDHNYEIKTELKVFGDQLKISLSAPPQLRDVRNSPFGATQAAVYHSAAISLRLKPPFNDGIFRTIEIDYGPL*TIGNAQVP 810 ++P+ +GS+ +AVAK FEG ++ D+ L NDP GG+H D + +P+F EL WTV + H DIGG A D+Y E LR+ P+KI +KG+ R D+L+++F N R ++ Q D ++ AC V E+ + A++++YG CV EL D ++ R I + DG Y G+A + A G +++I + + GD+ I++ +PPQ+ NS G + + VY + +L PP+N+G++R + +D+GP T+ NA+ P Sbjct: 119 DIPIHLGSLIPAMKAVAKYFEGDIHEGDLILHNDPAYGGSHAIDTCMYKPVFHEGELKYWTVCKGHLTDIGGPVPAGYNPNAKDIYAECLRIPPVKIWDKGKPRHDVLNMIFTNMRARRDQEGDFNALIGACQVGERNLLAMVAKYGARQVDTCVGELLDMADRHMRSLIRAVPDGTYEGTAVLEDAGHGFGDFDITATVTIKGDRCHIAIKSPPQIPYFINSYEGNSHSGVYLGLMMFAQLPPPYNEGLYRCVSLDFGPKGTLCNAREP 388
BLAST of mRNA_C-australica_Contig_10324.1.1 vs. uniprot
Match: A0A021X223_9HYPH (Hydantoin utilization protein B n=37 Tax=Proteobacteria TaxID=1224 RepID=A0A021X223_9HYPH) HSP 1 Score: 194 bits (493), Expect = 2.240e-54 Identity = 98/270 (36.30%), Postives = 154/270 (57.04%), Query Frame = 1 Query: 4 ELPVQVGSIPLVCRAVAKAFEGRVYAEDVFLCNDPVCGGTHLNDVALLRPIFEGDELFCWTVIRAHWLDIGGVAMADLRRAQTDVYGEGLRLAPIKIIEKGQNRQDILDLLFDNFRFQKQQRSDMLSMKAACTVAEKRMRALLSRYGLETFKNCVEELYDRNEQKARKAIMQLQDGVYHGSAFMS-AREGDHNYEIKTELKVFGDQLKISLSAPPQLRDVRNSPFGATQAAVYHSAAISLRLKPPFNDGIFRTIEIDYGPL*TIGNAQVP 810 ++P+ +GS+ +AVA F ++ D+FL NDP GG+H D + +P+F EL WTV + H DIGG A T++Y E LR+ P+KI ++G R D+L+++ N R ++ Q D ++ AC V E+ + A+L +YG E CV+ L D ++ R I + DG Y GSA + A G ++EIK + V GD I++++PPQ+ NS G + + VY + L PP+N+G++R + +D+GP T+ NAQ P Sbjct: 64 DIPIHLGSLIPAMKAVAAFFGDDIHEGDLFLHNDPAFGGSHAIDTCMYKPVFYKGELVYWTVCKGHLTDIGGPVPAGYNPNATEIYAECLRIPPVKIWDRGTPRHDVLNMILTNMRARRDQEGDFRALIGACQVGERNLIAMLDKYGKEQVDACVDTLLDMADRHMRALISTVPDGTYEGSAILEDAGHGFGDFEIKATVTVTGDSCHIAIASPPQIPYFINSYEGNSHSGVYLGLMMFAALPPPYNEGLYRCVSLDFGPKGTLCNAQEP 333
BLAST of mRNA_C-australica_Contig_10324.1.1 vs. uniprot
Match: A0A257ESE0_9RHOB (Hydantoinase (Fragment) n=26 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A257ESE0_9RHOB) HSP 1 Score: 192 bits (489), Expect = 4.140e-54 Identity = 95/270 (35.19%), Postives = 154/270 (57.04%), Query Frame = 1 Query: 4 ELPVQVGSIPLVCRAVAKAFEGRVYAEDVFLCNDPVCGGTHLNDVALLRPIFEGDELFCWTVIRAHWLDIGGVAMADLRRAQTDVYGEGLRLAPIKIIEKGQNRQDILDLLFDNFRFQKQQRSDMLSMKAACTVAEKRMRALLSRYGLETFKNCVEELYDRNEQKARKAIMQLQDGVYHGSAFMS-AREGDHNYEIKTELKVFGDQLKISLSAPPQLRDVRNSPFGATQAAVYHSAAISLRLKPPFNDGIFRTIEIDYGPL*TIGNAQVP 810 ++P+ +GS+ ++VAK F+G + D+ L NDP GG+H+ D + P+F EL WTV + H DIGG A T++Y EGLR+ PIKI +KG+ R D+++++ N R ++ Q D ++ AC V + ++ L+ +YG + C+ EL D E R I ++ DG Y G+A + A G ++EI + + GD I++ +PPQ+ NS G + + VY + +L PP+N+G++R + D GPL T+ NA+ P Sbjct: 61 DIPIHLGSLIPAMKSVAKYFDGEINDGDLMLHNDPSYGGSHIIDTCMYMPVFYEGELVFWTVCKGHLTDIGGPVPAGYNPNATEIYAEGLRIPPIKIWDKGKPRHDVMNMILSNMRARRDQEGDFNALIGACQVGARNLKRLMDKYGKVLVQECIAELLDMAEHHMRSLIAEVPDGTYTGTAILEDAGHGYGDFEITATVTIKGDGCHIAIQSPPQIPYFINSYEGNSHSGVYLGLMMFAQLPPPYNEGLYRCVSTDMGPLGTLCNAKSP 330
BLAST of mRNA_C-australica_Contig_10324.1.1 vs. uniprot
Match: A0A6G6WQ29_9HYPH (Hydantoinase B/oxoprolinase family protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A6G6WQ29_9HYPH) HSP 1 Score: 188 bits (478), Expect = 3.410e-52 Identity = 93/270 (34.44%), Postives = 153/270 (56.67%), Query Frame = 1 Query: 4 ELPVQVGSIPLVCRAVAKAFEGRVYAEDVFLCNDPVCGGTHLNDVALLRPIFEGDELFCWTVIRAHWLDIGGVAMADLRRAQTDVYGEGLRLAPIKIIEKGQNRQDILDLLFDNFRFQKQQRSDMLSMKAACTVAEKRMRALLSRYGLETFKNCVEELYDRNEQKARKAIMQLQDGVYHGSAFMS-AREGDHNYEIKTELKVFGDQLKISLSAPPQLRDVRNSPFGATQAAVYHSAAISLRLKPPFNDGIFRTIEIDYGPL*TIGNAQVP 810 ++P+ +GS+ +AVAK F ++ D+ L NDP GG+H D + +P+F +L WTV + H DIGG A ++Y E LR+ P+KI +KG+ R D+++++ N R ++ Q D ++ AC V E+ + A++ +YG +T C+ EL D ++ R I + DG Y G+A + A G ++EI +K+ GD I++ +PPQ+ NS G + + VY + L PP+N+G++R + ID+GP T+ NA P Sbjct: 64 DIPIHLGSLIPAMKAVAKFFGDDIHEGDLILHNDPAFGGSHAIDTCMYKPVFYKGKLAYWTVCKGHLTDIGGPVPAGYNPNAKEIYAECLRIPPVKIWDKGKPRHDVINMILTNMRARRDQEGDFNALIGACQVGERNLLAMVDKYGAQTVDTCINELLDMADRHMRSLIKTVPDGTYSGTAILEDAGHGLGDFEITATVKIKGDTCHIAIKSPPQVPYFINSYEGNSHSGVYLGLMMFAALPPPYNEGLYRCVSIDFGPKGTLCNAAEP 333 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10324.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10324.1.1 >prot_C-australica_Contig_10324.1.1 ID=prot_C-australica_Contig_10324.1.1|Name=mRNA_C-australica_Contig_10324.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=187bp MADLRRAQTDVYGEGLRLAPIKIIEKGQNRQDILDLLFDNFRFQKQQRSDback to top mRNA from alignment at C-australica_Contig_10324:2..826- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10324.1.1 ID=mRNA_C-australica_Contig_10324.1.1|Name=mRNA_C-australica_Contig_10324.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=825bp|location=Sequence derived from alignment at C-australica_Contig_10324:2..826- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10324:2..826- >mRNA_C-australica_Contig_10324.1.1 ID=mRNA_C-australica_Contig_10324.1.1|Name=mRNA_C-australica_Contig_10324.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=561bp|location=Sequence derived from alignment at C-australica_Contig_10324:2..826- (Chrysoparadoxa australica CS_1217)back to top |