mRNA_C-australica_Contig_10321.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10321.1.1 vs. uniprot
Match: UPI001391C8C4 (transposase n=2 Tax=Cyclobacterium TaxID=68288 RepID=UPI001391C8C4) HSP 1 Score: 161 bits (407), Expect = 9.660e-48 Identity = 72/130 (55.38%), Postives = 104/130 (80.00%), Query Frame = 1 Query: 1 FLIWTTQESVVMKKVGTIMIPQVNDGFRSL*SSYAQSINKQENRSGSLFRQKTKGKIIDE-NRFYPTNCFHYIHQNPIRAGLTAKMEDWKYSSFQEYTDPSRNKICDKKLAYKLLEINEEVFYEESYKII 387 FLI T ++S+V +VG++M+P +N+GFR L SSYAQ+INKQE RSGSLFRQKTK K++++ + YP CFHYIHQNP+R+GL K+EDW++SSF +Y +CD++ A +LL+I++E+FY+ESY++I Sbjct: 57 FLINTIKDSIVEMQVGSLMVPALNNGFRQLLSSYAQAINKQEGRSGSLFRQKTKAKLLEDGDEHYPLICFHYIHQNPLRSGLVGKLEDWEFSSFTDYLGMRNGSLCDQQTAIELLDISKELFYQESYRVI 186
BLAST of mRNA_C-australica_Contig_10321.1.1 vs. uniprot
Match: L8JGS3_9BACT (Putative transposase n=1 Tax=Fulvivirga imtechensis AK7 TaxID=1237149 RepID=L8JGS3_9BACT) HSP 1 Score: 150 bits (378), Expect = 2.470e-43 Identity = 70/130 (53.85%), Postives = 94/130 (72.31%), Query Frame = 1 Query: 1 FLIWTTQESVVMKKVGTIMIPQVNDGFRSL*SSYAQSINKQENRSGSLFRQKTKGKIIDENRF-YPTNCFHYIHQNPIRAGLTAKMEDWKYSSFQEYTDPSRNKICDKKLAYKLLEINEEVFYEESYKII 387 FL++TT +S+ MKK G I + + DGFR L SSY Q+INKQENR+GSLFRQKTK K + YP CFHYIHQNP+ AGL +ME+W +SSFQ+Y +CDK+LA+ L+ ++ + FYE+SY++I Sbjct: 57 FLVYTTDKSIKMKKTGGIEMTALADGFRQLLSSYTQAINKQENRTGSLFRQKTKAKCLTNGGTNYPFVCFHYIHQNPMTAGLVDRMEEWPFSSFQDYCATRNGTLCDKELAFDLINLSRQSFYEQSYQVI 186
BLAST of mRNA_C-australica_Contig_10321.1.1 vs. uniprot
Match: A0A239EZ61_9BACT (REP element-mobilizing transposase RayT n=1 Tax=Ekhidna lutea TaxID=447679 RepID=A0A239EZ61_9BACT) HSP 1 Score: 138 bits (347), Expect = 7.210e-39 Identity = 64/120 (53.33%), Postives = 91/120 (75.83%), Query Frame = 1 Query: 1 FLIWTTQESVVMKKVGTIMIPQVNDGFRSL*SSYAQSINKQENRSGSLFRQKTKGKIIDENRFYPTNCFHYIHQNPIRAGLTAKMEDWKYSSFQEYTDPSRNKICDKKLAYKLLEINEEV 360 FLI TT+ S KVG + + +N+GFR L SSY Q+ NKQ NR+GSLFRQ+TK K++DE++ YP CF+YIHQNP+ AGL +KMEDW++SSF++YT + +CDK LA +LL+++ ++ Sbjct: 57 FLISTTEASTREIKVGALNVTALNNGFRMLLSSYVQAFNKQINRTGSLFRQRTKSKLLDESKNYPFICFNYIHQNPMVAGLVSKMEDWEFSSFRDYTGIRKGTLCDKTLAAQLLDLDLQI 176
BLAST of mRNA_C-australica_Contig_10321.1.1 vs. uniprot
Match: I4APK1_BERLS (Y1_Tnp domain-containing protein n=1 Tax=Bernardetia litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Fx l1 / Sio-4) TaxID=880071 RepID=I4APK1_BERLS) HSP 1 Score: 131 bits (330), Expect = 4.490e-36 Identity = 65/132 (49.24%), Postives = 89/132 (67.42%), Query Frame = 1 Query: 1 FLIWTTQESVVMKKVGTIMIPQVNDGFRSL*SSYAQSINKQENRSGSLFRQKTKGKIIDENRF--YPTNCFHYIHQNPIRAGLTAKMEDWKYSSFQEYTDPSRNKICDKKLAYKLLEINEEVFYEESYKIID 390 FL+ T S +G + + ++++GFR L S YA N + RSGSLFRQKTKGK ++++ YP CFHYIHQNP++A L KMEDW++SSF++Y + K+ AY L++INEE FYEESY+IID Sbjct: 57 FLVNTNDYSTEEIMLGKLTLTRLSNGFRLLTSQYATYFNHKYKRSGSLFRQKTKGKNLEDSEQGNYPFTCFHYIHQNPMKAKLCQKMEDWEFSSFKDYLGVRTGSLITKQTAYDLIDINEEYFYEESYQIID 188
BLAST of mRNA_C-australica_Contig_10321.1.1 vs. uniprot
Match: UPI0019BC2BC8 (Transposase n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=UPI0019BC2BC8) HSP 1 Score: 129 bits (323), Expect = 4.980e-35 Identity = 62/131 (47.33%), Postives = 90/131 (68.70%), Query Frame = 1 Query: 1 FLIWTTQESVVMKKVGTIMIPQVNDGFRSL*SSYAQSINKQENRSGSLFRQKTKGKIIDE-NRFYPTNCFHYIHQNPIRAGLTAKMEDWKYSSFQEYTDPSRNKICDKKLAYKLLEINEEVFYEESYKIID 390 FLI Q ++ K+VG I +++G R+L +YA++INKQ +GSLF+Q TK K I E ++ Y CFHY HQNP++A L KMEDW YSSF++YT +C++ LA++LL+IN + Y++SY+IID Sbjct: 57 FLIHVDQRTIQTKRVGLIEKNILSEGIRNLLQTYAKAINKQNQSTGSLFQQNTKAKCISEGSKLYGEICFHYNHQNPMKARLVKKMEDWDYSSFKDYTRLRNGTLCNQALAFQLLDINPKTLYQDSYRIID 187
BLAST of mRNA_C-australica_Contig_10321.1.1 vs. uniprot
Match: A0A2M7NLY9_9BACT (Transposase n=1 Tax=Flexibacter sp. CG_4_10_14_3_um_filter_32_15 TaxID=1975530 RepID=A0A2M7NLY9_9BACT) HSP 1 Score: 128 bits (322), Expect = 7.660e-35 Identity = 66/132 (50.00%), Postives = 92/132 (69.70%), Query Frame = 1 Query: 1 FLIWTTQESVVMKKVGTIMIPQVNDGFRSL*SSYAQSINKQENRSGSLFRQKTKGKIIDE-NRFYPTNCFHYIHQNPIRAGLTAKMEDWKYSSFQEYTDPSRNKICDKKLAYKLLEINE--EVFYEESYKII 387 F I T+ES + K+G I I ++ +GFR L S YA N++ RSGSLFRQKTK K ++ N+ YP CF+Y+HQNPI+AGL KMEDW++SSF++Y KI +K+ A+ L++I+E E+FYE+SY I Sbjct: 57 FTINATEESSELMKLGGININKLTNGFRLLNSLYANQFNEKYKRSGSLFRQKTKAKSLEHSNKDYPFICFNYVHQNPIKAGLCEKMEDWEFSSFRDYWGVRNGKIINKEFAFDLIDISEDKELFYEDSYSNI 188
BLAST of mRNA_C-australica_Contig_10321.1.1 vs. uniprot
Match: A0A7U4E658_RUNSL (Y1_Tnp domain-containing protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) TaxID=761193 RepID=A0A7U4E658_RUNSL) HSP 1 Score: 128 bits (321), Expect = 1.030e-34 Identity = 64/130 (49.23%), Postives = 87/130 (66.92%), Query Frame = 1 Query: 1 FLIWTTQESVVMKKVGTIMIPQVNDGFRSL*SSYAQSINKQENRSGSLFRQKTKGKIID-ENRFYPTNCFHYIHQNPIRAGLTAKMEDWKYSSFQEYTDPSRNKICDKKLAYKLLEINEEVFYEESYKII 387 FLI T+ S V K+G + + DGFR L SSY Q+INKQE+R+GSLFRQK K K ++ + YP CFHYIHQNP++A L +EDW YSSF +Y + +CD+ LA +LL+ N+E F +S+ +I Sbjct: 57 FLINATKNSAVKIKIGHNEMSLLADGFRKLLSSYCQAINKQEDRTGSLFRQKPKAKNVEISDIHYPFQCFHYIHQNPLKASLIKSLEDWPYSSFCDYAALRQGTLCDQTLAMQLLDFNKESFISDSHAMI 186
BLAST of mRNA_C-australica_Contig_10321.1.1 vs. uniprot
Match: UPI00191D40FC (transposase n=1 Tax=Marivirga atlantica TaxID=1548457 RepID=UPI00191D40FC) HSP 1 Score: 125 bits (314), Expect = 1.080e-33 Identity = 62/129 (48.06%), Postives = 94/129 (72.87%), Query Frame = 1 Query: 1 FLIWTTQESVVMKKVGTIMIPQVNDGFRSL*SSYAQSINKQENRSGSLFRQKTKGKIIDENRFYPTNCFHYIHQNPIRAGLTAKMEDWKYSSFQEYTDPSRNKICDKKLAYKLLEINEEVFYEESYKII 387 FL+ TT ESV KK+G++ ++ +G R L +SYA+ N++ +RSGSLFRQ TK K+I E+ Y CF+YIHQNP+ A L KMEDW++SSF++Y + + + +K++A +L+ I++E+ Y+ESYKII Sbjct: 57 FLLNTTMESVATKKIGSLESTELQNGVRLLLTSYAKIYNEKYDRSGSLFRQNTKYKMI-ESEEYAFICFNYIHQNPMSAQLCQKMEDWEFSSFRDYINQRKGTLVNKQMARELIGIDDEIVYKESYKII 184
BLAST of mRNA_C-australica_Contig_10321.1.1 vs. uniprot
Match: A0A1X7IJ02_9BACT (Putative transposase n=1 Tax=Marivirga sericea TaxID=1028 RepID=A0A1X7IJ02_9BACT) HSP 1 Score: 124 bits (311), Expect = 3.220e-33 Identity = 60/133 (45.11%), Postives = 91/133 (68.42%), Query Frame = 1 Query: 1 FLIWTTQESVVMKKVGTIMIPQVNDGFRSL*SSYAQSINKQENRSGSLFRQKTKGKIIDENRF-YPTNCFHYIHQNPIRAGLTAKMEDWKYSSFQEYTDPSRNKICDKKLAYKLLEINEEVFYEESYKIIDFK 396 FLI+T Q+S+ ++G + + + FR + SS++ N + R+GSLFRQKTK K+++ + YP CF+YIHQNP++AGL KMEDWKYSSFQ+Y +C+ +LA KL++I+++ FY SY +I+ K Sbjct: 57 FLIYTNQKSIESIQLGLLESQVLKNSFRLINSSFSIEFNNKYTRTGSLFRQKTKFKLLENKKDNYPFICFNYIHQNPLKAGLVKKMEDWKYSSFQDYLGIREGTLCNFELAEKLIDIHKDDFYNTSYSVINEK 189
BLAST of mRNA_C-australica_Contig_10321.1.1 vs. uniprot
Match: A0A150Y3U5_9BACT (Transposase n=2 Tax=Roseivirga seohaensis TaxID=1914963 RepID=A0A150Y3U5_9BACT) HSP 1 Score: 123 bits (308), Expect = 9.130e-33 Identity = 58/129 (44.96%), Postives = 89/129 (68.99%), Query Frame = 1 Query: 1 FLIWTTQESVVMKKVGTIMIPQVNDGFRSL*SSYAQSINKQENRSGSLFRQKTKGKI-IDENRFYPTNCFHYIHQNPIRAGLTAKMEDWKYSSFQEYTDPSRNKICDKKLAYKLLEINEEVFYEESYKI 384 FL+ T++S + K G I + ++++ FR L S YA NK+ +RSGSLFRQKTK K+ +D N+ + CF Y HQNP +AGL KMEDW++SSF++Y+ +C+K++A+ L+ +NE+ F E+SY + Sbjct: 57 FLLNVTEKSTELVKQGNIEVTRLSNSFRLLLSQYALGFNKKHDRSGSLFRQKTKSKLMVDSNQAFI--CFQYTHQNPWKAGLVGKMEDWEFSSFRDYSLMRNGSLCNKEIAFNLINVNEKTFVEDSYGV 183 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10321.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10321.1.1 >prot_C-australica_Contig_10321.1.1 ID=prot_C-australica_Contig_10321.1.1|Name=mRNA_C-australica_Contig_10321.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=52bp MEDWKYSSFQEYTDPSRNKICDKKLAYKLLEINEEVFYEESYKIIDFKGFback to top mRNA from alignment at C-australica_Contig_10321:6..413+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10321.1.1 ID=mRNA_C-australica_Contig_10321.1.1|Name=mRNA_C-australica_Contig_10321.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=408bp|location=Sequence derived from alignment at C-australica_Contig_10321:6..413+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10321:6..413+ >mRNA_C-australica_Contig_10321.1.1 ID=mRNA_C-australica_Contig_10321.1.1|Name=mRNA_C-australica_Contig_10321.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=156bp|location=Sequence derived from alignment at C-australica_Contig_10321:6..413+ (Chrysoparadoxa australica CS_1217)back to top |