mRNA_C-australica_Contig_10317.2.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10317.2.1 vs. uniprot
Match: A0A2E8MZ05_9RICK (Uncharacterized protein n=3 Tax=Bacteria TaxID=2 RepID=A0A2E8MZ05_9RICK) HSP 1 Score: 294 bits (753), Expect = 1.510e-95 Identity = 152/277 (54.87%), Postives = 196/277 (70.76%), Query Frame = 1 Query: 1 YTWNAIDTFGTVGITYLLEVFYENITYYATSKLNGVPPIDSITFTLEEGNAFFHDYYYSEFFGVDPEGKGDAYWLKAWKNSNYLDQPDEMFLFFDASFAESNVDGIPFIFPIRTIANPFDQDINGNLLPSFWPADTFQVVDD--KVTIFKTEGVLNSNTNVIEIPVE---KKETKGGIRSIPLDGNPYSLQNNK-IIKAADSIFLELNSISPEAWFFLVRGQQETARPEGFGALFATPPANLPTNIF-PDQEANVVGFFNVASVSKLGRKLTKDAIR 810 Y + DTFG VG +Y L V Y+ Y +++ L IDSI FT E+ N F +Y+YS+FFG DP G+GD YWLKAWKN YL++P E+F F+DASF+E N DGIPFIFP+R +ANP++QDINGN P FWPADTF++ D KVT+F +EG + IE ++ K GG+ SIPLDGNPYSL + ++K DS++LEL+++S +AWFFL R QQET RPEGFGALFATPPANLPTNI D + VVGFF++++VS LG+K T + R Sbjct: 90 YIYTPTDTFGVVGNSYFLTVTYDGHDYTSSTVLPRGTAIDSINFTYEK-NVFEGEYFYSQFFGRDPIGEGDTYWLKAWKNGQYLNRPSELFYFYDASFSEGNGDGIPFIFPLRVLANPYEQDINGNAFPYFWPADTFKINPDNNKVTLFDSEGEVKDGK--IEFTLDETRKNPASGGLSSIPLDGNPYSLVGDTMVVKGMDSLYLELHTVSNDAWFFLYRLQQETDRPEGFGALFATPPANLPTNITCDDPDIPVVGFFDISNVSSLGQKFTPEVTR 363
BLAST of mRNA_C-australica_Contig_10317.2.1 vs. uniprot
Match: UPI0012BD680B (DUF4249 domain-containing protein n=1 Tax=Fulvivirga kasyanovii TaxID=396812 RepID=UPI0012BD680B) HSP 1 Score: 150 bits (380), Expect = 2.540e-40 Identity = 100/271 (36.90%), Postives = 138/271 (50.92%), Query Frame = 1 Query: 1 YTWN---AIDTFGTVGITYLLEV-FYENITYYATSKLNGVPPIDSITFTLEEGNAFFHDYYYSEFFGVDPEGKGDAYWLKAWKNSNYLDQPDEMFLFFDASFAE-SNVDGIPFIFPIRTIANPFDQDINGNLLPSFWPADTFQVVDDKVTIFKTEGVLNSNTNVIEIPVEKKETKGGIRSIPLDGNPYSLQNNKIIKAADSIFLELNSISPEAWFFLVRGQQETARPEGFGALFATPPANLPTNIFPDQEA--NVVGFFNVASVSKLGRKL 792 Y W+ A +FGT+G Y L V + +Y + + +N +DSITFT EE AFF + Y +E + DP+G+GD+YW++ +KN L +P E+ L FDA+F E S+ DGI FI PIR NP DQD + L +PY L DS+++E++SIS EA++FL +T RP GFG LFA P AN+PTNI+ + +VVGFFNVA+VS G+KL Sbjct: 91 YVWSPSGADPSFGTIGNEYTLNVQLQDGDSYQSVTTMNRTAQVDSITFTYEEETAFFPESYIAEVWARDPQGEGDSYWIRTYKNGVLLTKPQEINLAFDAAFTEGSSFDGITFIEPIRQGINPLDQDEDDEFL----------------------------------------------------SPYEL--------GDSVYVEIHSISNEAFYFLTEVAIQTDRPGGFGELFAQPLANVPTNIYATENGVKDVVGFFNVAAVSGKGKKL 301
BLAST of mRNA_C-australica_Contig_10317.2.1 vs. uniprot
Match: A0A7Y4VM04_9BACT (DUF4249 domain-containing protein n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7Y4VM04_9BACT) HSP 1 Score: 139 bits (349), Expect = 9.880e-36 Identity = 93/270 (34.44%), Postives = 131/270 (48.52%), Query Frame = 1 Query: 1 YTWNAI--DTFGTVGITYLLEVFYENITYYATSKLNGVPPIDSITFTLEEGNAFFHDYYYSEFFGVDPEGKGDAYWLKAWKNSNYLDQPDEMFLFFDASF-AESNVDGIPFIFPIRTIANPFDQDINGNLLPSFWPADTFQVVDDKVTIFKTEGVLNSNTNVIEIPVEKKETKGGIRSIPLDGNPYSLQNNKIIKAADSIFLELNSISPEAWFFLVRGQQETARPEGFGALFATPPANLPTNIFPDQEAN---VVGFFNVASVSKLGRKL 792 Y W + +TFGT+G TY L + E TY ATSK+ P +DSIT E + D+Y ++FF D GKGDAYW++A+KN L++P ++ + +DA F A + DGI FI PIR NP D D N + + P D S+++E+N+I+PEA+ +L + +T RP GF LFA P AN+PTNI + + N +GFFNV +VS G+KL Sbjct: 92 YVWTPVANETFGTIGNTYELSIVAEGQTYKATSKMGRAPVVDSITLKKNEPDQINPDFYRAQFFANDFPGKGDAYWIRAYKNKALLNKPADINVAYDAGFSAGGSFDGITFIPPIRGRINPNDTDANDKAVTPYVPGD------------------------------------------------------------SVYVEINAITPEAFTYLQQVSIQTNRPGGFSELFARPIANVPTNIV-NVDVNGKQAIGFFNVGAVSGKGQKL 300
BLAST of mRNA_C-australica_Contig_10317.2.1 vs. uniprot
Match: UPI0012BB7910 (DUF4249 domain-containing protein n=1 Tax=Fulvivirga lutimaris TaxID=1819566 RepID=UPI0012BB7910) HSP 1 Score: 130 bits (326), Expect = 2.120e-32 Identity = 94/272 (34.56%), Postives = 128/272 (47.06%), Query Frame = 1 Query: 1 YTW---NAIDTFGTVGITYLLEVFYENITYYATSKLNGVPPIDSITFTL-EEGNAFFHDYYYSEFFGVDPEGKGDAYWLKAWKNSNYLDQPDEMFLFFDASF-AESNVDGIPFIFPIRTIANPFDQDINGNLLPSFWPADTFQVVDDKVTIFKTEGVLNSNTNVIEIPVEKKETKGGIRSIPLDGNPYSLQNNKIIKAADSIFLELNSISPEAWFFLVRGQQETARPEGFGALFATPPANLPTNIF---PDQEANVVGFFNVASVSKLGRKL 792 YTW N + TVG +Y L + Y A+S L+ VP IDS+ FT EE N F + YY EF D G+GD YW+KA+KN +L+ P ++ + +DA F A N+DG FI PI+ P LN + + IE PY + DS+++E++SI+ EA++FL Q +T R GF +FA P N+ TNI PD V+GFFNV+SVS GRKL Sbjct: 88 YTWDPTNVAEKIETVGTSYQLRIELNGKVYTASSTLHRVPTIDSLKFTFKEEQNVFQPEGYYGEFVATDFRGQGDTYWIKAYKNGIFLNNPFDLNIAYDAGFNAGGNIDGFVFIQPIQDAVTP----------------------------------LNDDLDAIE--------------------PYII--------GDSLYVEIHSITNEAFYFLQEVQIQTQRDGGFDEIFAEPLENVSTNIVDQTPDLNNKVIGFFNVSSVSGRGRKL 297
BLAST of mRNA_C-australica_Contig_10317.2.1 vs. uniprot
Match: A0A1W2GEE0_9BACT (Uncharacterized protein n=1 Tax=Reichenbachiella faecimaris TaxID=692418 RepID=A0A1W2GEE0_9BACT) HSP 1 Score: 128 bits (321), Expect = 1.390e-31 Identity = 95/269 (35.32%), Postives = 128/269 (47.58%), Query Frame = 1 Query: 1 YTWNAI-DTFGTVGITYLLEVFYENITYYATSKLNGVPPIDSITFTLEEGNAF--FHDYYYSEFFGVDPEGKGDAYWLKAWKNSNYLDQPDEMFLFFDASFAESN-VDGIPFIFPIRTIANPFDQDINGNLLPSFWPADTFQVVDDKVTIFKTEGVLNSNTNVIEIPVEKKETKGGIRSIPLDGNPYSLQNNKIIKAADSIFLELNSISPEAWFFLVRGQQETARPEGFGALFATPPANLPTNIFPD-QEANVVGFFNVASVSKLGRKL 792 Y W+ + D FG +G TY L V T+ ATS N VP +DSITF E F YY +E + D G+GD YW+K +KN +L++P E+ L +DA F +S DG PFI PIR+ NP D D N + +PY+ DS+++EL++I+ A FL Q +T R GFGALFATP +N+PTNI + + VVGFF+V+SV G KL Sbjct: 91 YVWSPMTDGFGIIGNTYELTVVSRGDTFKATSMKNRVPKVDSITFEYNEDKIFGTVETYYSAELWVTDLIGEGDIYWIKTFKNEEFLNKPSEISLAWDAGFNKSAPFDGDPFIPPIRSSINPEDYDDNDEFI----------------------------------------------------SPYA--------DGDSVYVELHAITESARNFLSEVQIQTNREGGFGALFATPLSNVPTNIKNETSDRLVVGFFSVSSVETNGNKL 299
BLAST of mRNA_C-australica_Contig_10317.2.1 vs. uniprot
Match: UPI001F165148 (DUF4249 domain-containing protein n=1 Tax=Fulvivirga sp. W9P-11 TaxID=2904246 RepID=UPI001F165148) HSP 1 Score: 126 bits (317), Expect = 4.310e-31 Identity = 88/269 (32.71%), Postives = 131/269 (48.70%), Query Frame = 1 Query: 1 YTWNAIDTFGT--VGITYLLEVFYENITYYATSKLNGVPPIDSITFTL-EEGNAFFHDYYYSEFFGVDPEGKGDAYWLKAWKNSNYLDQPDEMFLFFDASFAESN-VDGIPFIFPIRTIANPFDQDINGNLLPSFWPADTFQVVDDKVTIFKTEGVLNSNTNVIEIPVEKKETKGGIRSIPLDGNPYSLQNNKIIKAADSIFLELNSISPEAWFFLVRGQQETARPEGFGALFATPPANLPTNI-FPDQEANVVGFFNVASVSKLGRKL 792 Y W+ + + VG +Y L V Y T+ A S++N VPPIDSI +T EE NAF + YY++FF DP G GD+YW+K +KN YL++P ++ + +DA F+ +DG+ FI PI+ A P ++D D ++ PY DS+++E+++IS +A+ FL + R GF +FA P N+P NI + VVGFFN+ASVS +G+KL Sbjct: 90 YIWDPATSESSFEVGRSYQLTVVYNGDTFEAGSQMNRVPPIDSIVYTYYEERNAFQPEGYYAQFFARDPVGTGDSYWIKTYKNGQYLNRPFDLNIAYDAGFSSGGEIDGLVFIQPIQDAATPLNED-----------EDAYE-------------------------------------------PYI--------PGDSVYVEIHAISNDAFTFLEEVGIQIQRDGGFDEIFAEPLENVPCNINCTTSDTQVVGFFNMASVSAMGKKL 296
BLAST of mRNA_C-australica_Contig_10317.2.1 vs. uniprot
Match: A0A1M6NY89_9BACT (Uncharacterized protein n=2 Tax=Reichenbachiella TaxID=156993 RepID=A0A1M6NY89_9BACT) HSP 1 Score: 124 bits (310), Expect = 5.390e-30 Identity = 92/269 (34.20%), Postives = 129/269 (47.96%), Query Frame = 1 Query: 1 YTWNAIDTFGTVGITYLLEVFYENITYYATSKLNGVPPIDSITFTLEEGNAFFHD--YYYSEFFGVDPEGKGDAYWLKAWKNSNYLDQPDEMFLFFDASFAESNVDGIPFIFPIRTIANPFDQDINGNLLPSFWPADTFQVVDDKVTIFKTEGVLNSNTNVIEIPVEKKETKGGIRSIPLDGNPYSLQNNKIIKAADSIFLELNSISPEAWFFLVRGQQETARPEGFGALFATPPANLPTNIFPDQEANV---VGFFNVASVSKLGRKL 792 YT+ A FG VG ++L V E T+ ATS++N VP IDS+TFT + + F + +Y EF+ DP G+GD YW+KA+KN+ +L QP E+ L +DA+F N DG PFI PIR N F D + E +PY+ DS+++E+ SIS EA+ +L T P GFGALFA P +N NI E++ +GFF+V++V G+KL Sbjct: 92 YTYPA--GFGQVGDDFVLTVSGEGETFTATSRMNRVPVIDSVTFTYDTFSGFGEEEEFYLGEFWSTDPVGEGDTYWIKAYKNTEFLSQPSEINLAYDAAFGSGNGDGTPFIQPIRQAVNSFGDD--------------------------------------DAEFE---------------SPYA--------DGDSLYVEIYSISNEAFEYLQILISNTNIPGGFGALFAGPLSNTYGNIQNTDESSTEEALGFFSVSAVEANGKKL 297
BLAST of mRNA_C-australica_Contig_10317.2.1 vs. uniprot
Match: UPI0019235AF5 (DUF4249 domain-containing protein n=1 Tax=Fulvivirga sediminis TaxID=2803949 RepID=UPI0019235AF5) HSP 1 Score: 119 bits (298), Expect = 2.610e-28 Identity = 84/270 (31.11%), Postives = 130/270 (48.15%), Query Frame = 1 Query: 1 YTWN-AIDTFG-TVGITYLLEVFYENITYYATSKLNGVPPIDSITFTL-EEGNAFFHDYYYSEFFGVDPEGKGDAYWLKAWKNSNYLDQPDEMFLFFDASFAESN-VDGIPFIFPIRTIANPFDQDINGNLLPSFWPADTFQVVDDKVTIFKTEGVLNSNTNVIEIPVEKKETKGGIRSIPLDGNPYSLQNNKIIKAADSIFLELNSISPEAWFFLVRGQQETARPEGFGALFATPPANLPTNIF--PDQEANVVGFFNVASVSKLGRKL 792 Y W+ A D+ +G +Y L + YE + A S+L VP +DS+ +T EE NAF + YY++F+ DPEG GDAYW+K +KN YL++P ++ + +DA F+ + +DG+ FI PI+ A P + D D ++ PY DS+++E+ SI+ EA+ FL + R GF +FA P N+P NI +++ VVGFFN+++VS G +L Sbjct: 90 YQWDPAADSAAFEIGRSYHLSITYEGNAFEADSELKRVPALDSVVYTFYEERNAFQPEGYYAQFYARDPEGTGDAYWIKTYKNGQYLNRPSDLNIAYDAGFSSTTTIDGVIFIEPIQNKATPLNDD-----------EDAYE-------------------------------------------PYVY--------GDSVYIEIYSITTEAFSFLDAVATQIERDGGFSEIFAEPLENVPCNISCTSNEKEQVVGFFNMSAVSYKGERL 297
BLAST of mRNA_C-australica_Contig_10317.2.1 vs. uniprot
Match: UPI001F48FA63 (DUF4249 domain-containing protein n=1 Tax=Fulvivirga sp. SW1-E11 TaxID=2904247 RepID=UPI001F48FA63) HSP 1 Score: 115 bits (289), Expect = 5.290e-27 Identity = 82/257 (31.91%), Postives = 122/257 (47.47%), Query Frame = 1 Query: 34 VGITYLLEVFYENITYYATSKLNGVPPIDSITFTL-EEGNAFFHDYYYSEFFGVDPEGKGDAYWLKAWKNSNYLDQPDEMFLFFDASFAESN-VDGIPFIFPIRTIANPFDQDINGNLLPSFWPADTFQVVDDKVTIFKTEGVLNSNTNVIEIPVEKKETKGGIRSIPLDGNPYSLQNNKIIKAADSIFLELNSISPEAWFFLVRGQQETARPEGFGALFATPPANLPTNIF--PDQEANVVGFFNVASVSKLGRKL 792 +G +Y L V Y T+ A S+L VP +DSI +T EE NAF + YY++F+ DPEG GD+YW+K +KN YL +P ++ + +DA+F+ + VDG+ FI PI+ A P + D D ++ PY DS+++E+ SI+ EA+ FL + R GF +FA P N+P NI +E VVGFFN ++V+ G +L Sbjct: 103 IGRSYHLSVTYNGNTFEADSELKRVPALDSIVYTYYEERNAFQPEGYYAQFYARDPEGTGDSYWIKTYKNGLYLSRPSDLNIAYDAAFSSTAPVDGVIFIEPIQNGATPLNDD-----------EDAYE-------------------------------------------PYVF--------GDSVYIEIYSITNEAFRFLDAVSTQIERDGGFAEIFAEPLENVPCNISCTSSEEEQVVGFFNASAVAYRGERL 297
BLAST of mRNA_C-australica_Contig_10317.2.1 vs. uniprot
Match: UPI00035ED13A (DUF4249 domain-containing protein n=1 Tax=Flexithrix dorotheae TaxID=70993 RepID=UPI00035ED13A) HSP 1 Score: 115 bits (288), Expect = 8.150e-27 Identity = 66/190 (34.74%), Postives = 101/190 (53.16%), Query Frame = 1 Query: 1 YTW--NAIDTFGTVGITYLLEVFYENITYYATSKLNGVPPIDSITFTLEEGNAFFHDYYYSEFFGVDPEGKGDAYWLKAWKNSNYLDQPDEMFLFFDASF-AESNVDGIPFIFPIRTIANPFDQDINGNLLPSFWPADTFQVVDDKVTIFKTEGVLNSNTNVIEIPVEKKETKGGIRSIPLDGNPYSLQN 561 Y W N D+ G + + Y L V ++ TY A S + VPPIDSI E + F + YY++ F DP G GD+YW++ +KN +L++P E+ L +D F A SN+DGI FI PIR NPFD+D NG+ L + D KV + N ++I +++ G + + P+ +++N Sbjct: 93 YVWESNGTDSIGILDMEYTLNVIFDGETYQAKSLVKRVPPIDSIFVEFREEDLGFPEGYYAQVFAKDPVGNGDSYWIRTYKNGEFLNKPVEINLSYDGGFSAGSNIDGITFITPIREGINPFDEDENGDFLAPYAIGDHI-----KVEVLSITNEAFDYMNEVKIQIDRPGGIGELFASPIFNVTSNIEN 277 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10317.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10317.2.1 >prot_C-australica_Contig_10317.2.1 ID=prot_C-australica_Contig_10317.2.1|Name=mRNA_C-australica_Contig_10317.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=275bp YTWNAIDTFGTVGITYLLEVFYENITYYATSKLNGVPPIDSITFTLEEGNback to top mRNA from alignment at C-australica_Contig_10317:1..825+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10317.2.1 ID=mRNA_C-australica_Contig_10317.2.1|Name=mRNA_C-australica_Contig_10317.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=825bp|location=Sequence derived from alignment at C-australica_Contig_10317:1..825+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10317:1..825+ >mRNA_C-australica_Contig_10317.2.1 ID=mRNA_C-australica_Contig_10317.2.1|Name=mRNA_C-australica_Contig_10317.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=825bp|location=Sequence derived from alignment at C-australica_Contig_10317:1..825+ (Chrysoparadoxa australica CS_1217)back to top |