mRNA_C-australica_Contig_10312.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10312.1.1 vs. uniprot
Match: UPI0003B68D97 (exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Oceanicaulis alexandrii TaxID=153233 RepID=UPI0003B68D97) HSP 1 Score: 288 bits (736), Expect = 6.610e-94 Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 1 Query: 1 MVVNAEARLAEILESDPEREAQWRAYQKLDDDPRITPVGRLLRVTSLDELPQLINVLKGDMSLVGPRPMTLDQQECYGQAMLDYQRVRPGLTGLWQVNGRNDTTFEERARLDSHYVQNWSLWRDVVILIRTVREVLFSSGR 423 MVVNAEARLAEILESDPEREAQWRAYQKLDDDPRITPVGRLLRVTSLDELPQLINVLKGDMSLVGPRPMTLDQQECYGQAMLDYQRVRPGLTGLWQVNGRNDTTFEERARLDSHYVQNWSLWRDVVIL+RTVREVLFSSGR Sbjct: 328 MVVNAEARLAEILESDPEREAQWRAYQKLDDDPRITPVGRLLRVTSLDELPQLINVLKGDMSLVGPRPMTLDQQECYGQAMLDYQRVRPGLTGLWQVNGRNDTTFEERARLDSHYVQNWSLWRDVVILVRTVREVLFSSGR 468
BLAST of mRNA_C-australica_Contig_10312.1.1 vs. uniprot
Match: A3UGW4_9PROT (UDP-galactose-lipid carrier transferase n=2 Tax=unclassified Oceanicaulis TaxID=2632123 RepID=A3UGW4_9PROT) HSP 1 Score: 251 bits (640), Expect = 1.890e-79 Identity = 120/141 (85.11%), Postives = 132/141 (93.62%), Query Frame = 1 Query: 1 MVVNAEARLAEILESDPEREAQWRAYQKLDDDPRITPVGRLLRVTSLDELPQLINVLKGDMSLVGPRPMTLDQQECYGQAMLDYQRVRPGLTGLWQVNGRNDTTFEERARLDSHYVQNWSLWRDVVILIRTVREVLFSSGR 423 MVV+AEA+L IL SDPEREAQWRAYQKLDDDPRIT VG+ LR++SLDELPQLINVLKGDMSLVGPRPMTLDQQE YG+A+L+YQRVRPGLTGLWQVNGRN+TTF+ERARLD +YV NWSLWRD VIL+RTVREVLFSSGR Sbjct: 328 MVVDAEAKLEAILASDPEREAQWRAYQKLDDDPRITAVGKFLRMSSLDELPQLINVLKGDMSLVGPRPMTLDQQEPYGEALLEYQRVRPGLTGLWQVNGRNETTFDERARLDRYYVHNWSLWRDAVILVRTVREVLFSSGR 468
BLAST of mRNA_C-australica_Contig_10312.1.1 vs. uniprot
Match: A0A4S2H3S2_9PROT (Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Marinicauda algicola TaxID=2029849 RepID=A0A4S2H3S2_9PROT) HSP 1 Score: 221 bits (563), Expect = 6.790e-68 Identity = 105/141 (74.47%), Postives = 120/141 (85.11%), Query Frame = 1 Query: 1 MVVNAEARLAEILESDPEREAQWRAYQKLDDDPRITPVGRLLRVTSLDELPQLINVLKGDMSLVGPRPMTLDQQECYGQAMLDYQRVRPGLTGLWQVNGRNDTTFEERARLDSHYVQNWSLWRDVVILIRTVREVLFSSGR 423 MV +AEARLA IL +DPER A+W YQKL +DPRITPVGR LR TSLDELPQLINVLKG+MSLVGPRPMT++Q++ YG + Y R+RPGLTG+WQVNGRN T+FEERARLD Y +NWSLWRD VIL RTVREVLFS+GR Sbjct: 329 MVTDAEARLARILANDPERAAEWETYQKLAEDPRITPVGRFLRRTSLDELPQLINVLKGEMSLVGPRPMTVEQKQAYGARLESYVRMRPGLTGMWQVNGRNSTSFEERARLDDWYARNWSLWRDAVILARTVREVLFSTGR 469
BLAST of mRNA_C-australica_Contig_10312.1.1 vs. uniprot
Match: A0A0P7V5U4_9PROT (Undecaprenyl-phosphate galactose phosphotransferase RfbP n=1 Tax=Oceanicaulis sp. HLUCCA04 TaxID=1666904 RepID=A0A0P7V5U4_9PROT) HSP 1 Score: 208 bits (529), Expect = 9.970e-63 Identity = 102/141 (72.34%), Postives = 115/141 (81.56%), Query Frame = 1 Query: 1 MVVNAEARLAEILESDPEREAQWRAYQKLDDDPRITPVGRLLRVTSLDELPQLINVLKGDMSLVGPRPMTLDQQECYGQAMLDYQRVRPGLTGLWQVNGRNDTTFEERARLDSHYVQNWSLWRDVVILIRTVREVLFSSGR 423 M V+AEARLA +L SDP AQW ++KLDDDPRIT VG+ LR SLDELPQLINVLKGDMSL+GPRPMTLDQQ YG A+ Y R+RPG+TGLWQVNGRN T+F ERARLD Y +NWSLWRD VILIRTVRE++ SGR Sbjct: 338 MSVDAEARLANVLASDPALAAQWATFKKLDDDPRITRVGQWLRKFSLDELPQLINVLKGDMSLIGPRPMTLDQQADYGPALSAYVRMRPGITGLWQVNGRNATSFAERARLDDWYARNWSLWRDGVILIRTVREIVIPSGR 478
BLAST of mRNA_C-australica_Contig_10312.1.1 vs. uniprot
Match: A0A4S2H8A8_9PROT (Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Marinicauda pacifica TaxID=1133559 RepID=A0A4S2H8A8_9PROT) HSP 1 Score: 206 bits (523), Expect = 6.360e-62 Identity = 96/141 (68.09%), Postives = 114/141 (80.85%), Query Frame = 1 Query: 1 MVVNAEARLAEILESDPEREAQWRAYQKLDDDPRITPVGRLLRVTSLDELPQLINVLKGDMSLVGPRPMTLDQQECYGQAMLDYQRVRPGLTGLWQVNGRNDTTFEERARLDSHYVQNWSLWRDVVILIRTVREVLFSSGR 423 M V+A+ RL EIL +DP +W YQKL DPRITPVGR+LR S DELPQLINV++G+MSLVGPRPMT+DQQ YG ++ Y RVRPGLTG+WQVNGRN T+F ERARLD Y +NWSLWRD+VIL+RTVREVLF +G+ Sbjct: 329 MAVDADRRLGEILSADPVAACEWNTYQKLTRDPRITPVGRVLRKISADELPQLINVVRGEMSLVGPRPMTIDQQAAYGASLESYVRVRPGLTGMWQVNGRNATSFTERARLDDWYARNWSLWRDIVILVRTVREVLFPNGQ 469
BLAST of mRNA_C-australica_Contig_10312.1.1 vs. uniprot
Match: A0A3T0EC37_9PROT (Undecaprenyl-phosphate galactose phosphotransferase, putative n=2 Tax=Glycocaulis alkaliphilus TaxID=1434191 RepID=A0A3T0EC37_9PROT) HSP 1 Score: 205 bits (522), Expect = 1.120e-61 Identity = 98/141 (69.50%), Postives = 114/141 (80.85%), Query Frame = 1 Query: 1 MVVNAEARLAEILESDPEREAQWRAYQKLDDDPRITPVGRLLRVTSLDELPQLINVLKGDMSLVGPRPMTLDQQECYGQAMLDYQRVRPGLTGLWQVNGRNDTTFEERARLDSHYVQNWSLWRDVVILIRTVREVLFSSGR 423 M V+AE +LA +L+ DPER AQW Y+KLD+DPRIT VG LR SLDELPQLINV +GDMSLVGPRPMTLDQQ YG ++ Y R+RPG+TGLWQVNGRN T+F ERARLD Y +NWSLWRD VIL+RTVRE++ SGR Sbjct: 339 MWVDAEDKLASVLDQDPERAAQWNTYKKLDNDPRITGVGHWLRKFSLDELPQLINVFRGDMSLVGPRPMTLDQQADYGLSLSAYVRMRPGITGLWQVNGRNATSFAERARLDDWYARNWSLWRDAVILVRTVREIVIPSGR 479
BLAST of mRNA_C-australica_Contig_10312.1.1 vs. uniprot
Match: A0A3D5ZXS1_9PROT (Bac_transf domain-containing protein n=3 Tax=Maricaulaceae TaxID=2800061 RepID=A0A3D5ZXS1_9PROT) HSP 1 Score: 206 bits (525), Expect = 1.350e-61 Identity = 99/141 (70.21%), Postives = 114/141 (80.85%), Query Frame = 1 Query: 1 MVVNAEARLAEILESDPEREAQWRAYQKLDDDPRITPVGRLLRVTSLDELPQLINVLKGDMSLVGPRPMTLDQQECYGQAMLDYQRVRPGLTGLWQVNGRNDTTFEERARLDSHYVQNWSLWRDVVILIRTVREVLFSSGR 423 M V+AE +LA +L DPER AQW ++KLDDDPRIT VG LR SLDELPQLINVLKGDMSLVGPRPMTLDQQ YG ++ Y R+RPG+TGLWQVNGRN T+F ERARLD Y +NWSLWRD VIL+RT+RE++ SGR Sbjct: 395 MWVDAEDKLASVLAQDPERAAQWETFKKLDDDPRITRVGHWLRKFSLDELPQLINVLKGDMSLVGPRPMTLDQQADYGPSLSAYVRMRPGITGLWQVNGRNATSFAERARLDDWYARNWSLWRDTVILVRTLREIVIPSGR 535
BLAST of mRNA_C-australica_Contig_10312.1.1 vs. uniprot
Match: A0A5M6ZRZ2_9PROT (Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Alkalicaulis satelles TaxID=2609175 RepID=A0A5M6ZRZ2_9PROT) HSP 1 Score: 202 bits (515), Expect = 1.290e-60 Identity = 98/140 (70.00%), Postives = 115/140 (82.14%), Query Frame = 1 Query: 1 MVVNAEARLAEILESDPEREAQWRAYQKLDDDPRITPVGRLLRVTSLDELPQLINVLKGDMSLVGPRPMTLDQQECYGQAMLDYQRVRPGLTGLWQVNGRNDTTFEERARLDSHYVQNWSLWRDVVILIRTVREVLFSSG 420 M ++AEARL ++ SDP A+W A+QKL DPRIT VGRL+R T++DELPQLINVL+G+MSLVGPRPMTL Q + YG + YQRVRPGLTGLWQ NGRN TTF ERARLD+ YV+NWSLWRD VILIRTVREV+F+ G Sbjct: 341 MQMDAEARLEALIASDPAVAAEWNAFQKLRRDPRITAVGRLIRKTNIDELPQLINVLRGEMSLVGPRPMTLGQMDEYGDYLTAYQRVRPGLTGLWQTNGRNATTFAERARLDAWYVRNWSLWRDFVILIRTVREVVFARG 480
BLAST of mRNA_C-australica_Contig_10312.1.1 vs. uniprot
Match: A0A550KKM5_9PROT (Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=2 Tax=Glycocaulis profundi TaxID=2518983 RepID=A0A550KKM5_9PROT) HSP 1 Score: 202 bits (514), Expect = 3.340e-60 Identity = 94/141 (66.67%), Postives = 117/141 (82.98%), Query Frame = 1 Query: 1 MVVNAEARLAEILESDPEREAQWRAYQKLDDDPRITPVGRLLRVTSLDELPQLINVLKGDMSLVGPRPMTLDQQECYGQAMLDYQRVRPGLTGLWQVNGRNDTTFEERARLDSHYVQNWSLWRDVVILIRTVREVLFSSGR 423 M V+A+ARL +LE+DP + A+W AYQKL DDPRITPVGR++R +LDELPQL+NVL+G+MSLVGPRPM +Q+ YG+A+ Y+R+RPG+TG+WQVNGRN TTF ERARLD+ Y +NWSLWRD VIL RTV EV+ SGR Sbjct: 369 MAVDADARLRALLEADPAKAAEWNAYQKLTDDPRITPVGRIIRRLNLDELPQLVNVLRGEMSLVGPRPMMPEQRPVYGEAIHAYERMRPGITGMWQVNGRNATTFAERARLDAWYARNWSLWRDAVILARTVLEVVRPSGR 509
BLAST of mRNA_C-australica_Contig_10312.1.1 vs. uniprot
Match: A0A059E528_9PROT (Bac_transf domain-containing protein n=3 Tax=Hyphomonas TaxID=85 RepID=A0A059E528_9PROT) HSP 1 Score: 201 bits (510), Expect = 7.170e-60 Identity = 89/140 (63.57%), Postives = 117/140 (83.57%), Query Frame = 1 Query: 1 MVVNAEARLAEILESDPEREAQWRAYQKLDDDPRITPVGRLLRVTSLDELPQLINVLKGDMSLVGPRPMTLDQQECYGQAMLDYQRVRPGLTGLWQVNGRNDTTFEERARLDSHYVQNWSLWRDVVILIRTVREVLFSSG 420 M++NAE RL++++ SDP+ A+W AYQKL DPRIT +G+++R +LDELPQLIN+L+GDMSLVGPRPMT+ Q E YG ++ Y+R+RPG+TG+WQ NGRN TTF ERAR+D+ YV+NWSLWRD +IL+RT REVLF+ G Sbjct: 341 MIMNAEERLSQMIASDPKVAAEWNAYQKLQKDPRITRIGKIIRKANLDELPQLINILRGDMSLVGPRPMTIPQIEEYGPSIAAYKRMRPGITGIWQTNGRNSTTFAERARMDAWYVRNWSLWRDFIILVRTFREVLFARG 480 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10312.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10312.1.1 >prot_C-australica_Contig_10312.1.1 ID=prot_C-australica_Contig_10312.1.1|Name=mRNA_C-australica_Contig_10312.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=142bp MVVNAEARLAEILESDPEREAQWRAYQKLDDDPRITPVGRLLRVTSLDELback to top mRNA from alignment at C-australica_Contig_10312:1..426+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10312.1.1 ID=mRNA_C-australica_Contig_10312.1.1|Name=mRNA_C-australica_Contig_10312.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=426bp|location=Sequence derived from alignment at C-australica_Contig_10312:1..426+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10312:1..426+ >mRNA_C-australica_Contig_10312.1.1 ID=mRNA_C-australica_Contig_10312.1.1|Name=mRNA_C-australica_Contig_10312.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=426bp|location=Sequence derived from alignment at C-australica_Contig_10312:1..426+ (Chrysoparadoxa australica CS_1217)back to top |