mRNA_C-australica_Contig_1031.5.5 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_1031.5.5 vs. uniprot
Match: D7G5T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5T0_ECTSI) HSP 1 Score: 524 bits (1349), Expect = 8.330e-162 Identity = 332/820 (40.49%), Postives = 446/820 (54.39%), Query Frame = 3 Query: 2100 YRYAHLGLFLIWTLLAVLDRFYWNVWPRQSFPGVCNGGCGNDFIGDCGDKDGFCLKPGPGGAKAFDAIARASARIVITSTNLMFFTMCHGTWNALASTKLLRPWLYNIREDNLWLHKVAGIFMGFWTVLHVWSLFLPSLLDGYTNFVYGGPFEWPANVPLGRSQVDVVNKAANWGVDDIWRIVWMTLIFCVFIPVSRSLWALRKNYTLAMWLHILAGIGFFIDSARRRTHPHVWVLNLPLVLWYLVDKLVTRFWYRVNNNCEVTRIRLGEDYMLLLWAEHRSKKRVSDIFWLKTHDSRNCNAHMFEFSHPFTCGSVHHN---------TLTDGHVVEVPTTYDPHWEGQRYQLVTIDEQTGMEELPPDLVESARSNGGPATMSTLCTPVSGGADLGELVGCETDGEGGMTSF-FGEKSDIR----AFLNTPREGRVRSGSFRYSKKLQKVSNLEGTGLKL-PDLECTSPK---MPPYSSKVGSKGQAFTVSG-MPHLQPAATATTHDGSSGSDVKASKSTAPGNNDRLPNRELHKSTIEPLLPRGKEAQQGNNGRSSSHRALQKSTSERLRRQSTADYTQARMGPGGKTALQAQKEENDWTTFAIIKIYQKEDDEK--TCMGALNA----RKPETQRIAELEGDSVAKDIENILTGVDRRVKLNLRVMGPYHTSPYGRLEELPNLPPLMIIATGAGAGLILDTVGLIRARNITLRNKVTMLFSCNSLPLLQFVANTVLAQMTPNLVVRMALSQNEELTFEEATHDMTSKELMFGRLSMQECMKEVEPGTEVYFCGSGALNRLIGGLCGKMSLPFVGSAVQ 4484
YRY LG++L + VLDRFYWNVWPRQ+ +C GCG DF + D G CLK GP AK FD IAR SAR +I++TNLMF TMCHGTWN L+ ++LRP+LY R DN WLH + G MG WT+LHV+SL LPS+ G+ N GGP E P V L S VD+ NK ANWG DDIWRI+WMTLIFCV P+SRS WAL+KN+TLAMWLHI G+G+F D+ RRRTHPHVW+LN P+ LWY+ DK+ RV++ E TRI L EDYMLLLW E K R+ DIFWLK DS E +HPFT S H T +EVPT HW+G R+ L + RSN ++ + SG + G + G ++SF FG+ + +R A +T V SF + + G+ PD++ S + P S+ S + T+SG +P + TT+DGS VK+++ P++ + K T + G N R E +RR ST ++ + R + L+ E W+ AI+K+ ++ +CMG R PET IA+LE R L LR GPY S YGRL E P+LPPL+I+ATGAGA L+LD +G +RA NI V++ +S SL LLQFV NT+LA+ +P + ++ AL+++E+L ++ + EL+ GRL +++ + EV TEVYFCG G +N L+ C + + +VGS+VQ
Sbjct: 116 YRYVGLGVWLFISTFMVLDRFYWNVWPRQT---ICTDGCGGDFFCEMDDDPG-CLKDGPWSAKTFDVIARISARFIISTTNLMFITMCHGTWNYLSEVQVLRPFLYAWRTDNFWLHSIGGWTMGIWTMLHVYSLLLPSIFHGFKNVAVGGPVELPLQVSLAVSNVDLDNKLANWGYDDIWRIIWMTLIFCVLTPLSRSAWALKKNFTLAMWLHIGVGVGYFFDNWRRRTHPHVWILNTPVFLWYIADKVWCCTRGRVDDRAETTRISLDEDYMLLLWHEEHPK-RICDIFWLKHRDSDGT-----EMAHPFTTCSSHDTPNKQATASGTAAVKTTIEVPTDTSVHWKGHRFLLASS--------------SGRRSNATDPNRRSVRSFFSG-----KSFGAQGS-FGRVSSFRFGQSNPMREARLASSHTGSSQDVDVDSFFEEDEKDEPGETTMIGVDANPDIDEVSIMVGGLKPKGSRSYSLPRLGTISGGVPEVS-----TTNDGSG---VKSAR----------PDKPVKKETGSDVG--------GPNRR------------EVIRRLSTKNFIEYRKAEAEEGRLET-VEAGSWSKMAIVKVNRRTSKASKCSCMGLTFILSIFRDPETSSIADLEA-------------AQRNAPLQLRTYGPYR-SEYGRLAEFPHLPPLLIVATGAGAALVLDFIGYVRANNIVPLRPVSVCYSSASLALLQFVTNTLLAERSPGIHIQTALTRHEDLEIVDSANG-PEPELVMGRLDIKKIIGEVSQETEVYFCGGGGINALLRETCTRRGIKYVGSSVQ 851
BLAST of mRNA_C-australica_Contig_1031.5.5 vs. uniprot
Match: D8LCP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP9_ECTSI) HSP 1 Score: 416 bits (1069), Expect = 4.740e-125 Identity = 286/763 (37.48%), Postives = 386/763 (50.59%), Query Frame = 3 Query: 2244 DKDGFCLKPGPGGAKAFDAIARASARIVITSTNLMFFTMCHGTWNALASTKLLRPWLYNIREDNLWLHKVAGIFMGFWTVLHVWSLFLPSLLDGYTNFVYGGPFEWPANVPLGRSQVDVVNKAANWGVDDIWRIVWMTLIFCVFIPVSRSLWALRKNYTLAMWLHILAGIGFFIDSARRRTHPHVWVLNLPLVLWYLVDKLVTRFWYRVNNNCEVTRIRLGEDYMLLLWAEHRSKKRVSDIFWLKTHDSRNCNAHMFEFSHPFTCGSVHHN-----TLTD----GHVVEVPTTYDPHWEGQRYQLVTIDEQTGMEELPPDLVESARSNGGPATMSTLCTPVSGGADLGELVGCETDGEGGMTSFFGEKSDIRAFLNTPREGRVRSGSFRYSKKLQKVSNLEGTGLKLPDLECTSPKMPPYSSKVGSKGQAFTVSGMPHLQPAATATTHDGSSGSDVKASKSTAPGNNDRLPNRELHKSTIEPLLPRGKEAQQGNNGRSSSHRALQKSTSERLRRQSTADYTQARMGPGGKTALQAQKEENDWTTFAIIKIYQKEDDEK--TCMGALNA----RKPETQRIAELEGDSVAKDIENILTGVDRRVKLNLRVMGPYHTSPYGRLEELPNLPPLMIIATGAGAGLILDTVGLIRARNITLRNKVTMLFSCNSLPLLQFVANTVLAQMTPNLVVRMALSQNEELTF-EEATHDMTSKELMFGRLSMQECMKEVEPGTEVYFCGSGALNRLIGGLCGKMSLPFVGSAVQ 4484
D D CLK GP AKAFDAIARASAR +I++TNLMF TMCHGTWN L+ ++LRP+LY R DN WLH + G MG WT+LHV+SL LPSL G+ N GGP E P V L S VDV NK ANWG DDIWRI WMTLIFCV IP+SRS WAL+KN+TLAMWLH+ GIG+F D+ RRRTHPHVW+LN P+ LWY+ DK+ W T S E +HPFT S H TL+D ++EVPT HW+G R+ L + +++ + V S S ++ T + S D+ + + E T+ G D+R ++ +VS + G GLK P +S+ S T+ G P + TT+DG+ G N P++ + + T G + N +K+ +RL + +Y +A G +QA W+ AI+K+ ++ K +CMG R PET IA+LE R LR GPY S YGRL E P+LPPL+I+ATGAGA L+LD +G +RA NI V++ +S SL LLQFV NT+LA+ +P + ++ AL+++E+L +EA+ EL+ GRL ++ + EV TEVYFCG G +N L+ C + + +VGS+VQ
Sbjct: 2 DDDPGCLKAGPWSAKAFDAIARASARFIISTTNLMFITMCHGTWNFLSEVQVLRPFLYAWRTDNFWLHSIGGWTMGIWTMLHVYSLLLPSLFHGFKNVAVGGPVELPFQVSLAVSNVDVDNKLANWGYDDIWRIFWMTLIFCVLIPLSRSAWALKKNFTLAMWLHMGVGIGYFFDNWRRRTHPHVWILNTPVFLWYIADKV-----------------------------------------WCSTRGSDGT-----EMAHPFTTCSSHDTPNKPATLSDTTAVNTMIEVPTDTSVHWKGHRFLLASGGQRSVTTDPKHRNVPSFFSG---RSLGTHGSSGSKDIDVDSIFDDDEKEEPEETTMIGV--DVRPDID-------------------EVSVIVG-GLK------------PTASRSLSLPLPGTIYG-PETE---VGTTNDGN-------------GFNPARPDKLVREKT-------GADVGGAN----------RKAVIKRLNTTAFKEYRKADAEKGQLATIQA----GSWSKMAIVKVNRRTSKAKKCSCMGLTFILRIFRDPETSSIADLEA-------------AQRNPTFELRTYGPYR-SEYGRLVEFPHLPPLLIVATGAGAALVLDFIGYVRANNIVPLRPVSVYYSSASLALLQFVTNTLLAERSPGIHIQTALTRHEDLQIVDEASGP--EPELVMGRLDIKNIIGEVSQETEVYFCGGGGINALLRETCARRGIKYVGSSVQ 627
BLAST of mRNA_C-australica_Contig_1031.5.5 vs. uniprot
Match: D7G5S8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S8_ECTSI) HSP 1 Score: 223 bits (569), Expect = 2.470e-60 Identity = 132/363 (36.36%), Postives = 164/363 (45.18%), Query Frame = 3 Query: 2100 YRYAHLGLFLIWTLLAVLDRFYWNVWPRQSFPGVCNGGCGNDFIGDCGDKDGFCLKPGPGGAKAFDAIARASARIVITSTNLMFFTMCHGTWNALASTKLLRPWLYNIREDNLWLHKVAGIFMGFWTVLHVWSLFLPSLLDGYTNFVYGGPFEWPANVPLGRSQVDVVNKAANWGVDDIWRIVWMTLIFCVFIPVSRSLWALRKNYTLAMWLHILAGIGFFIDSARRRTHPHVWVLNLPLVLWYLVDKLVTRFWYRVNNNCEVTRIRLGEDYMLLLWAEHRSKKRVSDIFWLKTHDSRNCNAHMF-EFSHPFTCGSVHHNTLTDGHV----------------VEVPTTYDPHWEGQRYQLVT 3137
YRY LG++L + VLDRFYWNVWPRQS +C GCG DF D D V L S VDV NK ANWG DD+WR++WMTLIFCV P+SRS+WAL+KN++LAMWLHI G+G+F D+ RRRTHPHVW+LN P+VLWY+ DK+ RVN+ E TRI+L EDYMLLLW E + K + DIFWLK D + + E +HPFT S H + GH +EVP D +W+G R+ L +
Sbjct: 2 YRYVGLGVWLFISTFMVLDRFYWNVWPRQS---ICTDGCGGDFFCDMDD------------------------------------------------------------------------------------------------------------VGLMASNVDVQNKLANWGYDDVWRLIWMTLIFCVLTPLSRSVWALKKNFSLAMWLHIGVGMGYFFDNWRRRTHPHVWILNTPVVLWYIADKIWCCTEGRVNHRAETTRIKLDEDYMLLLWNEDQPKS-ICDIFWLKHSDRDSKGSRRTGEVAHPFTTCSSHDTAV--GHTSPEAGISTVGSPGRPNIEVPLETDVNWKGHRFLLTS 250
BLAST of mRNA_C-australica_Contig_1031.5.5 vs. uniprot
Match: A0A2V3IFJ1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFJ1_9FLOR) HSP 1 Score: 192 bits (488), Expect = 8.500e-48 Identity = 118/322 (36.65%), Postives = 174/322 (54.04%), Query Frame = 3 Query: 2103 RYAHLGL-FLIW------TLLAVLDRFYWNVWPRQSFPGVCNGGCGNDFIGDCGDKDGFCLKPGPGGAKAFDAIARASARIVITSTNLMFFTMCHGTWNALASTKLLRPWL--YNIREDNLWLHKVAGIFMGFWTVLHVWSLFLPSLLDGYTNFVYGGPFEWPANVPLGRSQVDVVNKAANWGV--DDIWRIVWMTLIFCVFIPVSRSLWALRKNYTLAMWLHILAGIGFFIDSARRRTHPHVWVLNLPLVLWYLVDKLVTRFWYRVNNNCEVTRIRLGEDYMLLLWAEHRSKKRVSDIFWLKTHDSRNCNAHMFEFSHPFT 3035
RYA L L+W TLLAV+DRF WNVWPRQ + + G G+DF DG LKPGP K +DA+AR S R I + NL+ FTM + N +A + + R + + E N LHK GI + WT+LHVWS+ P ++ G+ V G FEW + + D+ N+ G+ DD++RIV MT++ + +P+S W L + L + LH + + +FID RR THPH W+LN P + ++VD ++ +W R + + R L EDYMLL E ++ + V ++L+ + + E +H FT
Sbjct: 35 RYAPLNYELLVWVCFGTFTLLAVVDRFVWNVWPRQMYT-IGTGSAGSDFT------DG--LKPGPWAVKFYDAVARISGRYSIVALNLLLFTMMKTSMNFVAESWIARHVVDFTDSVEGNRRLHKWNGIAIAVWTLLHVWSILFPCIVHGWNAEVILGSFEWILSERGPKGFKDINNETKTMGLQGDDVFRIVEMTILLAILLPLSVR-W-LHTRWHLGIHLHNIINVLYFIDIVRRHTHPHSWILNTPFFVAWIVDSVIGSYWRR--SKPLMHRQHLSEDYMLLFSDERKTLETVGPKYYLRL-----VRSSLLERAHVFT 338
BLAST of mRNA_C-australica_Contig_1031.5.5 vs. uniprot
Match: A0A448YYA3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYA3_9STRA) HSP 1 Score: 192 bits (487), Expect = 1.970e-46 Identity = 121/333 (36.34%), Postives = 166/333 (49.85%), Query Frame = 3 Query: 2121 LFLIWTLLAVLDRFYWNVWPRQSFPGVCNGGCGNDFIGDCGDKDGFCLKPGPGGAKAFDAIARASARIVITSTNLMFFTMCHGTWNALASTKLLRPWL--YNIREDNLWLHKVAGIFMGFWTVLHVWSLFLPSLLDGYTNFVYGGPFEWPANV--PLGRSQVDVVNKAANWGVDDIWRIVWMTLIFCVFIPVSRSLWALRKNYTLAMWLHILAGIGFFIDSARRRTHPHVWVLNLPLVLWYLVDKLVTRFWYRVNNNC---EVTRIRLGEDYMLLLWAEHRSKKRVSDI----------FWLKTHDSRNCNAHMFEFSHPFTCGSVHHNTLTD 3068
+F I T LA++DRF N WPRQ F + G G D + KPGP A+D IAR S R I + NL+ T + + +K + + NI + NL LHK GI + T +HVWS+ P + GYT V G FEWP + P G D VNK +DD+WR+V MT++FC+ +P+S ++ R + + M LH L + +F+D RR THPH WVLN P+ ++ DK FW +N EV R LGE+YM+L W +K D ++L+ DS FE +H FTC NT D
Sbjct: 43 VFGITTTLAIIDRFTTNFWPRQMFS-IGQGSAGTDRL--------VGFKPGPWSVVAYDVIARISGRFSICAYNLLLITRLRCLEHCILCSKWVNRMIDCSNIIKANLRLHKWNGIALCVLTFIHVWSILFPCVFHGYTAKVIRGTFEWPLSERPPPGFKDADAVNKQMGLEIDDVWRMVEMTVMFCILLPLSVRWFSTRWH--IGMPLHRLINVLYFVDIVRRHTHPHSWVLNTPIFCAWVFDK----FWMWYSNRRKGPEVHRTYLGENYMVLYWKHCETKLGSYDALDTHPILSPDYFLRLDDSS-----FFESAHVFTCFENRTNTSID 355
BLAST of mRNA_C-australica_Contig_1031.5.5 vs. uniprot
Match: A0A6U9ZH54_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9ZH54_9STRA) HSP 1 Score: 187 bits (476), Expect = 5.240e-46 Identity = 118/313 (37.70%), Postives = 163/313 (52.08%), Query Frame = 3 Query: 2121 LFLIWTLLAVLDRFYWNVWPRQSFPGVCNGGCGNDFIGDCGDKDGFCLKPGPGGAKAFDAIARASARIVITSTNLMFFTMCHGTWNALASTKLLRPWL--YNIREDNLWLHKVAGIFMGFWTVLHVWSLFLPSLLDGYTNFVYGGPFEWPANV--PLGRSQVDVVNKAANWGVDDIWRIVWMTLIFCVFIPVSRSLWALRKNYTLAMWLHILAGIGFFIDSARRRTHPHVWVLNLPLVLWYLVDKLVTRFWYRVNNNC-EVTRIRLGEDYMLLLWAEHRS--KKRVSDIFWLKTHDSRNCNAHMFEFSHPFTC 3038
+F+ T+LA++DRF N WPRQ F + +G G+D I K GP A+D IAR S R I + NL+ T + L +K + L NI + NL LHK I + T +HVWS+ LP + Y V G FEWP + P G D + K + +DD+WR+V MTL+ CVF+P+S W L +Y + M LH L + +F+D RR THPH WVLN P+ ++ DK FWY + EV R+ LGE+Y++L W S VS ++L+ DS E +H FTC
Sbjct: 87 IFVSTTILAIIDRFTTNFWPRQMFT-IGSGSAGSDQI--------VGFKSGPWSVVAYDVIARISGRFSICAFNLLLVTRLRCLEHILLCSKWINKVLDCTNIIKVNLRLHKWNAIVLCILTFVHVWSILLPCITHNYKAKVNPGYFEWPLSERKPPGFKDADPLTKTMSLQIDDVWRLVEMTLLMCVFVPLSVR-W-LSTHYHIGMPLHRLITVLYFVDIVRRHTHPHSWVLNTPIFCAWVFDKFW--FWYSNRHQSPEVHRVFLGENYIVLYWKHKDSITNSVVSPDYFLRLRDSS-----FLEGAHVFTC 381
BLAST of mRNA_C-australica_Contig_1031.5.5 vs. uniprot
Match: D7G5S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S9_ECTSI) HSP 1 Score: 160 bits (405), Expect = 6.270e-41 Identity = 98/202 (48.51%), Postives = 126/202 (62.38%), Query Frame = 3 Query: 3891 TCMG---ALNA-RKPETQRIAELEGDSVAKDIENILTGVDRRVKLNLRVMGPYHTSPYGRLEELPNLPPLMIIATGAGAGLILDTVGLIRARNITLRNKVTMLFSCNSLPLLQFVANTVLAQMTPNLVVRMALSQNEELTFEEATHDMTSKELMFGRLSMQECMKEVEPGTEVYFCGSGALNRLIGGLCGKMSLPFVGSAVQ 4484
TC+G LN R PET IA++E + D+E I LRV GPY S YGRLEE PNLPPL+IIATGAGAGL+LD VG +RA+ IT + V + +S SL LLQFV NT+LA+ TP + V AL+++EEL T+ EL+ GRL ++ ++ V TEVYFCG G +N L+ C K + +VGSAVQ
Sbjct: 19 TCIGLTWVLNIFRTPETASIADVEETN---DLETI----------PLRVYGPYR-SEYGRLEEFPNLPPLLIIATGAGAGLVLDFVGFVRAKKITPKRPVKVCYSSASLALLQFVTNTLLAERTPGIQVETALTRHEELEMFNTTNQ-PKPELVIGRLDVKSIIRGVSEDTEVYFCGGGGINTLLREACAKRGMKYVGSAVQ 205
BLAST of mRNA_C-australica_Contig_1031.5.5 vs. uniprot
Match: A0A7S1AZW1_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AZW1_NOCSC) HSP 1 Score: 170 bits (430), Expect = 6.110e-40 Identity = 111/341 (32.55%), Postives = 165/341 (48.39%), Query Frame = 3 Query: 2136 TLLAVLDRFYWNVWPRQSFPGVCNGGCGNDFIGDCGDKDGFCLKPGPGGAKAFDAIARASARIVITSTNLMFFTMCHGTWNALASTKLLRPWLYNIREDN----LWLHKVAGIFMGFWTVLHVWSLFLPSLLDGYTNFVYGGPFEWPANVPLGRSQV---DVVNKAANWGV--DDIWRIVWMTLIFCVFIPVSRSLWALRKNYTLAMWLHILAGIGFFIDSARRRTHPHVWVLNLPLVLWYLVDKLVTRFWYRVNNNCEVTRIRLGEDYMLLLWAEHRSKKRVSDIFWLKTHDSRNCNAHMFEFSHPFTCGSVHHNTLTDGHVVEVP--TTYDPHWEGQRY 3125
T + + DR NVWPR+SF V G +G D LK GP +D +AR S R + TS N++ +TM H T L + R L + +++ WLH V G GF + HV+S+ P L GY+ +V G +PL ++ DV N+ G+ DD+WR++ MTL F + P S L LR NY + + LH I +FID ARR +HPH WVLN+P+ ++ D V W+RV+ R R+ ++++ +W+ S +F L+++ + C E HP C + + VP + DP W GQ Y
Sbjct: 115 TAVWIFDRLVTNVWPRESFTQV---GWLVTLLGGGTSSDRVPLKLGPWTVPLYDVVARISGRFLTTSLNILMWTMMHTTHRVLQESWFARCGLVDFAQESDESRRWLHNVNGYLSGFLVLFHVYSILFPVFLHGYSAYVTPGSLA----LPLSERRIEGTDVDNEGKLMGLQGDDVWRLIEMTLFFVILFPWSLRL--LRCNYRVGIQLHRWVFILYFIDIARRHSHPHNWVLNVPVFFLWVADVAVGN-WWRVHKYA-ARRQRVSSEHVVCMWSSDTSLDTSGPLFLLRSNSHKCC-----EPRHPMRC-------FQNRGLATVPPDSICDPTWHGQVY 432
BLAST of mRNA_C-australica_Contig_1031.5.5 vs. uniprot
Match: A0A6U5HDT5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5HDT5_9STRA) HSP 1 Score: 147 bits (372), Expect = 4.130e-33 Identity = 92/320 (28.75%), Postives = 149/320 (46.56%), Query Frame = 3 Query: 2100 YRYAHLGLFLIWTLLAVLDRFYWNVWPRQSFPGVCNGGCGNDFIGDCGDKDGFCLKPGPGGAKAFDAIARASARIVITSTNLMFFTMCHGTWNALASTKLLRPWLYNIREDNLWLHKVAGIFMGFWTVLHVWSLFLPSLLDGYTNFVYGGPFEWPANV--PLGRSQVDVVNKAANWGVDDIWRIVWMTLIF--CVFIPVSRSLWALRKNYTLAMWLHILAGIGFFIDSARRRTHPHVWVLNLPLVLWYLVDKLVTRFWYRVNNNCEVTRIRLGEDYMLLLW----AEHRSKKRVSDIFWLKTHDSRNCNAHMFEFSHPFT 3035
Y A +FL T L V+DR N WPRQSF + G D F K GP + +D AR S R + + N +FFTM ++ + S L R ++ L +HK GI + T++HVWS+ P + Y + G F +P + P G VD K +DD++R++ ++++ +F V + + NY L + +H + +F+D RR THPH WVLN+P+ +++D + +R ++ + +G +Y+ + W A + K + DI + +N E HPFT
Sbjct: 7 YEAAFWMVFLSTTALFVMDRLTTNFWPRQSFSNTFSTG-----------SDNFEFKDGPWTVRTYDIFARVSGRFTMIALNALFFTMMKTSYQYI-SENLDRYIDFSDDTAPLRIHKWIGISLCVVTIIHVWSILFPVFISNYGFKIVPGSFTFPLSEKKPNGFKDVDAAKKMVMMQIDDLYRLIMISILLGPLIFYSVKK----ISTNYRLGIRIHQFVMLMYFVDIVRRHTHPHSWVLNVPVFFLWVLDYCYGVY-FRGATMVKIETVEIGSNYIAIFWKNPCAVFQKKSGIGDIIHILPSYGKNFIDDTAERKHPFT 309
BLAST of mRNA_C-australica_Contig_1031.5.5 vs. uniprot
Match: A0A3M6UED7_POCDA (NAD_binding_6 domain-containing protein (Fragment) n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UED7_POCDA) HSP 1 Score: 129 bits (325), Expect = 1.020e-26 Identity = 87/258 (33.72%), Postives = 140/258 (54.26%), Query Frame = 3 Query: 2313 SARIVITSTNLMFFTMCHGTWNALASTKLLRPWLYNIREDNLWLHKVAGIFM-GFWTVLHVWSLFLPSLLDGYTNFVYGGPFE---------------WPANVPLGRSQVDVVNKAANWGVDDIWRIVWMTLIFCVFIPVSRSLWALRKNYTLAMWLHILAGIGFFIDSARRRTHPHVWVLNLPLVLWYLVDKLVTRFWYRVNNNCEVTRIRLGEDYMLL-LWAEHRSKKRVSDIFWLKTHDSRNCNAHMFEFSHPFT 3035
+AR++ITS NLMF+TM N ++ + IRE + +H AGIF+ ++ HV +F+P L+DG T Y P W G + D +K + D+I+R V M ++FC F P+SRS +A +++Y+LAM LHI AGI + ID+ R+ TH V NLP+++ + VD+LV+ ++YR ++ V + +G+DY++L + + K V D+++L H + + SHPFT
Sbjct: 212 TARLIITSQNLMFYTMMWCLPNFISEVTPNWITVDGIREVHSRMHTFAGIFLIAVPSLAHVLVIFVPPLIDG-TELKYYPPSTFNYSTSPDHLNWTKPWDPAAVEGWTFND--HKGVHLTSDEIYRFVLMIVLFCFFFPLSRSNYANQRSYSLAMALHIFAGIWYAIDNIRKITHGLAHVTNLPILIIWCVDRLVSIYFYRRHDGHIVEKEVIGKDYVILYVKLDKDVKYTVGDVYYL-LHQPKGSTGIAPQRSHPFT 465 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1031.5.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1031.5.5 >prot_C-australica_Contig_1031.5.5 ID=prot_C-australica_Contig_1031.5.5|Name=mRNA_C-australica_Contig_1031.5.5|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=823bp MEEKKEEDTATLGGAESFKISPRLYPYYRYAHLGLFLIWTLLAVLDRFYWback to top mRNA from alignment at C-australica_Contig_1031:6125..16549- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1031.5.5 ID=mRNA_C-australica_Contig_1031.5.5|Name=mRNA_C-australica_Contig_1031.5.5|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=10425bp|location=Sequence derived from alignment at C-australica_Contig_1031:6125..16549- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1031:6125..16549- >mRNA_C-australica_Contig_1031.5.5 ID=mRNA_C-australica_Contig_1031.5.5|Name=mRNA_C-australica_Contig_1031.5.5|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=2469bp|location=Sequence derived from alignment at C-australica_Contig_1031:6125..16549- (Chrysoparadoxa australica CS_1217)back to top |