mRNA_C-australica_Contig_1030.7.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_1030.7.1 vs. uniprot
Match: A0A183I835_9BILA (DUF3523 domain-containing protein n=1 Tax=Onchocerca flexuosa TaxID=387005 RepID=A0A183I835_9BILA) HSP 1 Score: 72.8 bits (177), Expect = 3.090e-12 Identity = 55/166 (33.13%), Postives = 92/166 (55.42%), Query Frame = 3 Query: 207 FDSSAFDKAVEILNKLG---TGAEATATARGMLKYEQQSQEELKGRMDEIKNWAKEIDQAIRGQKSQQRQLTDAKRKEQEQIVAHYRDQLARSREDDFRGAVAEAKEADRKLQDELANKAEAHRRGTLEYEAELREKVDLEAVKARTDGQIRAARQNRDIRLEQVR 695 FDSSA ++A + +L EA AR + +Y +Q + E + E++ + +Q ++ +++ LT+ R + A ++DQLAR R+++ A + K Q+E K EA R+ T+E+E L+ K DLE V+A T + +AAR+NRD+ LEQ+R Sbjct: 6 FDSSALERAADAARQLERSRNAKEAFEIAR-LQEYTKQKEYEAAAKQAELQMQSLRTEQIRVAEEERRKTLTEETR--HARARAEHQDQLARKRQEEELATKARMQAESLKKQEESVRKQEAMRKATVEHELALKHKYDLEKVQAETHARAKAARENRDVNLEQLR 168
BLAST of mRNA_C-australica_Contig_1030.7.1 vs. uniprot
Match: A0A2H1CPS3_FASHE (DUF3523 domain-containing protein n=1 Tax=Fasciola hepatica TaxID=6192 RepID=A0A2H1CPS3_FASHE) HSP 1 Score: 73.6 bits (179), Expect = 1.450e-11 Identity = 54/164 (32.93%), Postives = 94/164 (57.32%), Query Frame = 3 Query: 207 FDSSAFDKAVEILNKLGTGAEATATARGMLKYEQQSQEELKGRMDEIKNWAKEID-QAIRGQKSQQRQLTDAKRKEQEQIVAHYRDQLARSREDDFRGAVAEAKEADRKLQDELANKAEAHRRGTLEYEAELREKVDLEAVKARTDGQIRAARQNRDIRLEQVR 695 FDS+A ++A + +L + A K+EQ Q E + ++ E + ++I Q R Q+ ++R+ + + + Q+Q A Y+D LAR R++D A ++E + + EA RRGT+EYEAELR K +++ ++AR G+ + R+NR++RLE+ R Sbjct: 47 FDSAALERAAKAARELESSKHAKEAFELSQKHEQTLQVEYQAKLKEYELAMEQIKIQQFRAQQEERRKTLEQEAQLQKQR-ADYQDMLARKRQEDQVALQARSQEENIRKXXXXXXXXEAMRRGTIEYEAELRHKNEMKQIEARLRGEAQVERENRELRLERAR 209
BLAST of mRNA_C-australica_Contig_1030.7.1 vs. uniprot
Match: A0A4E0RN40_FASHE (ATPase family AAA domain-containing protein 3-B n=3 Tax=Fasciolidae TaxID=27843 RepID=A0A4E0RN40_FASHE) HSP 1 Score: 73.6 bits (179), Expect = 1.880e-11 Identity = 54/164 (32.93%), Postives = 94/164 (57.32%), Query Frame = 3 Query: 207 FDSSAFDKAVEILNKLGTGAEATATARGMLKYEQQSQEELKGRMDEIKNWAKEID-QAIRGQKSQQRQLTDAKRKEQEQIVAHYRDQLARSREDDFRGAVAEAKEADRKLQDELANKAEAHRRGTLEYEAELREKVDLEAVKARTDGQIRAARQNRDIRLEQVR 695 FDS+A ++A + +L + A K+EQ Q E + ++ E + ++I Q R Q+ ++R+ + + + Q+Q A Y+D LAR R++D A ++E + + EA RRGT+EYEAELR K +++ ++AR G+ + R+NR++RLE+ R Sbjct: 47 FDSAALERAAKAARELESSKHAKEAFELSQKHEQTLQVEYQAKLKEYELAMEQIKIQQFRAQQEERRKTLEQEAQLQKQR-ADYQDMLARKRQEDQVALQARSQEENIRKXXXXXXXXEAMRRGTIEYEAELRHKNEMKQIEARLRGEAQVERENRELRLERAR 209
BLAST of mRNA_C-australica_Contig_1030.7.1 vs. uniprot
Match: A0A0N5AA81_9BILA (Uncharacterized protein n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A0N5AA81_9BILA) HSP 1 Score: 72.8 bits (177), Expect = 3.640e-11 Identity = 69/251 (27.49%), Postives = 118/251 (47.01%), Query Frame = 3 Query: 6 LVPGS*YRRPGCFSF*PHPVFVNMGLLS---RFQKERPQGIPGDDG--------EGETNHLATPAIKDDPGVYKNVPGFDSSAFD---KAVEILNKLGTGAEATATARGMLKYEQQSQEELKGRMDEIKNWAKEIDQAIRGQKSQQRQLTDAKRKEQ-------EQIVAHYRDQLARSREDDFRGAVAEAKEADRKLQDELANKAEAHRRGTLEYEAELREKVDLEAVKARTDGQIRAARQNRDIRLEQVR 695 + P Y CF+ + ++ +G +S K + IP D G +G+ N + K + + FDSSA + KA + L K EA +R +EL R E K+++ I+ K Q ++ + +R++ ++ A Y+DQLAR R+++ A +E + Q+E K E+ R+ T+E+E L++K DLE ++ T + +AAR+NRD+ LEQ+R Sbjct: 80 IAPDKDYLLARCFTLTLYLLYAGLGKMSWLFGMNKGQQPMIPPDFGAQSGSNGDQGDRNDGKSKDKKSEEVGRRMAYSFDSSALERAAKAAKELEKFPNAKEALELSR---------LQELT-RQKEYDVQKKQLEAQIQSMKGDQMRVAEEERRKSLVEESKHARMRADYQDQLARKRQEEELATKARMQEEMLRKQEESVKKQESLRKATIEHELALKQKYDLEKIEVETKAKAKAARENRDVNLEQLR 320
BLAST of mRNA_C-australica_Contig_1030.7.1 vs. uniprot
Match: A0A044QNY6_ONCVO (AAA domain-containing protein n=9 Tax=Onchocercidae TaxID=6296 RepID=A0A044QNY6_ONCVO) HSP 1 Score: 70.9 bits (172), Expect = 1.570e-10 Identity = 54/166 (32.53%), Postives = 91/166 (54.82%), Query Frame = 3 Query: 207 FDSSAFDKAVEILNKLG---TGAEATATARGMLKYEQQSQEELKGRMDEIKNWAKEIDQAIRGQKSQQRQLTDAKRKEQEQIVAHYRDQLARSREDDFRGAVAEAKEADRKLQDELANKAEAHRRGTLEYEAELREKVDLEAVKARTDGQIRAARQNRDIRLEQVR 695 FDSSA ++A + +L EA AR + +Y +Q + E + E++ + +Q ++ +++ L + R + A ++DQLAR R+++ A + K Q+E K EA R+ T+E+E L+ K DLE V+A T + +AAR+NRD+ LEQ+R Sbjct: 54 FDSSALERAADAARQLERSRNAKEAFEIAR-LQEYTKQKEYEAAAKQAELQMQSLRTEQIRVAEEERRKTLVEETR--HARARAEHQDQLARKRQEEELATKARMQAESLKKQEESVRKQEAMRKATVEHELALKHKYDLEKVQAETHARAKAARENRDVNLEQLR 216
BLAST of mRNA_C-australica_Contig_1030.7.1 vs. uniprot
Match: A0A0R3Q672_9BILA (DUF3523 domain-containing protein n=1 Tax=Brugia timori TaxID=42155 RepID=A0A0R3Q672_9BILA) HSP 1 Score: 69.7 bits (169), Expect = 1.940e-10 Identity = 55/170 (32.35%), Postives = 90/170 (52.94%), Query Frame = 3 Query: 207 FDSSAFDKAVEILNKLGTGAEATATARGMLKYEQQSQEELKGRMDEIKNWAKEIDQAIRGQKSQQRQLTDAKRKE-------QEQIVAHYRDQLARSREDDFRGAVAEAKEADRKLQDELANKAEAHRRGTLEYEAELREKVDLEAVKARTDGQIRAARQNRDIRLEQVR 695 FDSSA ++A + +L A E Q+E + AK+ + I+ Q+S+Q ++ + +R++ + A ++D LAR R+++ A + + K Q+E K EA R+ T+E+E L+ K DLE V+A T+ + +AARQNRDI LEQ+R Sbjct: 49 FDSSALERAADAARQLEMSRNAKEAFEMARLQEFTKQKEYEAA-------AKQAEAQIQAQRSEQIRVAEEERRKTLVEETKHARARAEHQDHLARKRQEEELTMKARMQAENLKKQEESVRKQEAIRKATIEHELALKHKYDLEKVEAETNARAKAARQNRDINLEQLR 211
BLAST of mRNA_C-australica_Contig_1030.7.1 vs. uniprot
Match: A0A6P6XTQ9_DERPT (ATPase family AAA domain-containing protein 3-like n=1 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6XTQ9_DERPT) HSP 1 Score: 70.1 bits (170), Expect = 3.230e-10 Identity = 59/170 (34.71%), Postives = 88/170 (51.76%), Query Frame = 3 Query: 207 FDSSAFDKAVEILNKLGTGAEATATARGMLKYEQQSQEELKGRMDEIKNWAKEIDQAI-------RGQKSQQRQLTDAKRKEQEQIVAHYRDQLARSREDDFRGAVAEAKEADRKLQDELANKAEAHRRGTLEYEAELREKVDLEAVKARTDGQIRAARQNRDIRLEQVR 695 FDSSA ++A + +L E + A L QQ + K + +++ KE +QA+ + Q+ + R+ A+ +Q Q+ A Y DQLAR A + + K Q+E K EA R+ TLE E ELR D + ++A GQ +A RQNRDIRLEQ++ Sbjct: 65 FDSSALERAAKAAKEL----EQSRYAEAALDLAQQQE---KTKQLDLQKTIKEYEQAMASAQIEAKKQEQEHRRRMLAEESKQAQLKAQYEDQLARKXXXXXXXXQRAANDENLKRQEESVVKQEAIRKATLEKEMELRASADAKRIEAEIRGQAQAERQNRDIRLEQLK 227
BLAST of mRNA_C-australica_Contig_1030.7.1 vs. uniprot
Match: A0A504Y568_FASGI (ATPase family AAA domain-containing protein 3-B n=1 Tax=Fasciola gigantica TaxID=46835 RepID=A0A504Y568_FASGI) HSP 1 Score: 69.7 bits (169), Expect = 3.840e-10 Identity = 52/164 (31.71%), Postives = 93/164 (56.71%), Query Frame = 3 Query: 207 FDSSAFDKAVEILNKLGTGAEATATARGMLKYEQQSQEELKGRMDEIKNWAKEID-QAIRGQKSQQRQLTDAKRKEQEQIVAHYRDQLARSREDDFRGAVAEAKEADRKLQDELANKAEAHRRGTLEYEAELREKVDLEAVKARTDGQIRAARQNRDIRLEQVR 695 FDS+A ++A + +L + A K+E Q E + ++ E + +++ Q R Q+ ++R+ + + + Q+Q A Y+D LAR R++D A ++E + + EA RRGT+EYEAELR K +++ ++AR G+ + R+NR++RLE+ R Sbjct: 47 FDSAALERAAKAARELESSKHAKEAFELSQKHELTLQVEYQAKLKEYELAMEQMKIQQFRAQQEERRKTLEQEAQLQKQR-ADYQDMLARKRQEDQVALQARSQEENIRKXXXXXXXXEAMRRGTIEYEAELRHKNEMKQIEARLRGEAQVERENRELRLERAR 209
BLAST of mRNA_C-australica_Contig_1030.7.1 vs. uniprot
Match: A0A1P6C0U4_BRUMA (BMA-ATAD-3, isoform a n=8 Tax=Onchocercidae TaxID=6296 RepID=A0A1P6C0U4_BRUMA) HSP 1 Score: 69.7 bits (169), Expect = 3.890e-10 Identity = 55/170 (32.35%), Postives = 90/170 (52.94%), Query Frame = 3 Query: 207 FDSSAFDKAVEILNKLGTGAEATATARGMLKYEQQSQEELKGRMDEIKNWAKEIDQAIRGQKSQQRQLTDAKRKE-------QEQIVAHYRDQLARSREDDFRGAVAEAKEADRKLQDELANKAEAHRRGTLEYEAELREKVDLEAVKARTDGQIRAARQNRDIRLEQVR 695 FDSSA ++A + +L A E Q+E + AK+ + I+ Q+S+Q ++ + +R++ + A ++D LAR R+++ A + + K Q+E K EA R+ T+E+E L+ K DLE V+A T+ + +AARQNRDI LEQ+R Sbjct: 49 FDSSALERAADAARQLEMSRNAKEAFEMARLQEFTKQKEYEAA-------AKQAEAQIQAQRSEQIRVAEEERRKTLVEETKHARARAEHQDHLARKRQEEELTMKARMQAENLKKQEESVRKQEAIRKATIEHELALKHKYDLEKVEAETNARAKAARQNRDINLEQLR 211
BLAST of mRNA_C-australica_Contig_1030.7.1 vs. uniprot
Match: A0A1Y3BSU6_EURMA (ATPase family AAA domain-containing protein 3-B-like protein n=2 Tax=Pyroglyphidae TaxID=6952 RepID=A0A1Y3BSU6_EURMA) HSP 1 Score: 69.7 bits (169), Expect = 3.900e-10 Identity = 56/167 (33.53%), Postives = 82/167 (49.10%), Query Frame = 3 Query: 195 NVPGFDSSAFDKAVEILNKLGTGAEATATARGMLKYEQQSQEELKGRMDEIKNWAKEIDQAIRGQKSQQRQLTDAKRKEQEQIVAHYRDQLARSREDDFRGAVAEAKEADRKLQDELANKAEAHRRGTLEYEAELREKVDLEAVKARTDGQIRAARQNRDIRLEQVR 695 N FDSSA ++A + +L A A + E Q EL+ M E + + Q+ + R+ A+ +Q Q+ A Y DQLAR A + + + Q+E K E+ R+ TLE E ELR D + ++A GQ +A RQNRDIRLEQ++ Sbjct: 63 NTYQFDSSALERAAKAAKELEQSRYAEAALDLARQQETTKQLELQKTMKEYEQAMANAQIEAKKQEQEHRRRMLAEESKQAQLKAQYEDQLARXXXXXXXXXQRAANDENLRRQEESVAKQESIRKATLEKEMELRAAADAKRIEAEIRGQAQAERQNRDIRLEQLK 229 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1030.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1030.7.1 >prot_C-australica_Contig_1030.7.1 ID=prot_C-australica_Contig_1030.7.1|Name=mRNA_C-australica_Contig_1030.7.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=208bp MGLLSRFQKERPQGIPGDDGEGETNHLATPAIKDDPGVYKNVPGFDSSAFback to top mRNA from alignment at C-australica_Contig_1030:10886..12167+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1030.7.1 ID=mRNA_C-australica_Contig_1030.7.1|Name=mRNA_C-australica_Contig_1030.7.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1282bp|location=Sequence derived from alignment at C-australica_Contig_1030:10886..12167+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1030:10886..12167+ >mRNA_C-australica_Contig_1030.7.1 ID=mRNA_C-australica_Contig_1030.7.1|Name=mRNA_C-australica_Contig_1030.7.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=624bp|location=Sequence derived from alignment at C-australica_Contig_1030:10886..12167+ (Chrysoparadoxa australica CS_1217)back to top |