mRNA_C-australica_Contig_1030.1.9 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: A0A3Q3E9C3_9LABR (RING finger protein 145-like n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3E9C3_9LABR) HSP 1 Score: 68.6 bits (166), Expect = 3.910e-8 Identity = 57/191 (29.84%), Postives = 88/191 (46.07%), Query Frame = 2 Query: 1445 MLDSL----TMRYYGIGRPQQFGPTGIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLG-WGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMPEAPEAPGPSVGEAEA 2002
ML SL TM Y + + F I +D +++ V V ++ ++ L V+ S G W + S + +H W A W++F L + + S R TE L + N+ VC +C +E+ SS + T C H+FH CL +W+Y CPMC + + P P AP P+ G+A A
Sbjct: 417 MLTSLQVTGTMLIYSLFMVELFRSDPIESLDEVIYWVNAVSRVLEFMVALCVVAYGTWESLFGEWSWMGASVIIIHSYFNV----WLRAQSGWRSFLLRQEAAKKINSLPRATERELQRHND---VCAICFQEM--SSAVITYCG---HFFHGNCLRKWLYVQETCPMCH-QTVRPN-PSAPSPASGDAPA 593
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: A0A667YZK4_9TELE (Zmp:0000000662 n=3 Tax=Euacanthomorphacea TaxID=123369 RepID=A0A667YZK4_9TELE) HSP 1 Score: 67.8 bits (164), Expect = 5.910e-8 Identity = 56/191 (29.32%), Postives = 85/191 (44.50%), Query Frame = 2 Query: 1445 MLDSL----TMRYYGIGRPQQFGPTGIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLG-WGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMPEAPEAPGPSVGEAEA 2002
ML SL TM Y + + F I +D +++ V V ++ ++ L V+ S G W + S + +H W A W++F L + + S R T E L + N+ VC +C +E+ SS + T C H+FH CL +W+Y CPMC + P PGPS G +A
Sbjct: 415 MLTSLQVTGTMLIYSLFMVELFRSDPIDSLDEVIYWVNAVSRVLEFVVALCVVAYGTWESLFGEWSWMGASVIIIHSYFNV----WLRAQSGWRSFLLRQEAAKKINSLPRATAEQLQQHND---VCSICFQEM--SSAVITYCG---HFFHGNCLRKWLYVQETCPMCHQAV----RPSPPGPSQGSGDA 589
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: UPI001BD34D1B (RING finger protein 145 n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD34D1B) HSP 1 Score: 67.8 bits (164), Expect = 6.660e-8 Identity = 57/191 (29.84%), Postives = 88/191 (46.07%), Query Frame = 2 Query: 1445 MLDSL----TMRYYGIGRPQQFGPTGIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLG-WGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMPEAPEAPGPSVGEAEA 2002
ML SL TM Y + + F I +D +++ V V ++ ++ L V+ S G W + S + +H W A W++F L + + S R TE+ L + N+ VC +C +E+T S + T C H+FH CL +W+Y CPMC + + P P P P+ GEA A
Sbjct: 415 MLTSLQVTGTMLIYSLFMVELFRSDPIESLDEVIYWVNAVSRVLEFVVALCVVAYGTWESLFGEWSWMGASVIIIHSYFNV----WLRAQSGWRSFLLRQEAAKKINSLPRATEQQLQQHND---VCSICFQEMT--SAVITYCG---HFFHGNCLRKWLYVQETCPMCH-QTVRPN-PSGPSPASGEAPA 591
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: UPI00117640D6 (LOW QUALITY PROTEIN: RING finger protein 145-like n=1 Tax=Myripristis murdjan TaxID=586833 RepID=UPI00117640D6) HSP 1 Score: 67.8 bits (164), Expect = 7.010e-8 Identity = 56/191 (29.32%), Postives = 85/191 (44.50%), Query Frame = 2 Query: 1445 MLDSL----TMRYYGIGRPQQFGPTGIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLG-WGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMPEAPEAPGPSVGEAEA 2002
ML SL TM Y + + F I +D +++ V V ++ ++ L V+ S G W + S + +H W A W++F L + + S R T E L + N+ VC +C +E+ SS + T C H+FH CL +W+Y CPMC + P PGPS G +A
Sbjct: 415 MLTSLQVTGTMLIYSLFMVELFRSDPIDSLDEVIYWVNAVSRVLEFVVALCVVAYGTWESLFGEWSWMGASVIIIHSYFNV----WLRAQSGWRSFLLRQEAAKKINSLPRATAEQLQQHND---VCSICFQEM--SSAVITYCG---HFFHGNCLRKWLYVQETCPMCHQAV----RPSPPGPSQGSGDA 589
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: A0A3B1KGV3_ASTMX (RING finger protein 145-like n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1KGV3_ASTMX) HSP 1 Score: 67.0 bits (162), Expect = 1.080e-7 Identity = 52/179 (29.05%), Postives = 81/179 (45.25%), Query Frame = 2 Query: 1445 MLDSL----TMRYYGIGRPQQFGPTGIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLG-WGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMPEAP 1966
ML SL T+ Y + + + T + G+D +M+ V GV ++ + L V+ S G W + S + +H W A W++F L + R S R + +L E G+VC +C +++T S + T C H+FH CL +W+Y CPMC I AP
Sbjct: 413 MLTSLQVTGTLLIYCLFMVEVWRSTALPGLDEVMYYVNGVCRVLEFAVALCVVAYGAWESLWGEWSWMGASVIIIHSYCNV----WLRAQAGWKSFLLRQEAARKINSLPRANAQ---QLQEHGDVCAICFQDMT--SAVITYCG---HFFHGNCLRKWLYVQETCPMCHTSIKPTSAP 579
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: A0A8C5H9X1_9TELE (RING finger protein 145-like n=3 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5H9X1_9TELE) HSP 1 Score: 66.6 bits (161), Expect = 1.510e-7 Identity = 54/191 (28.27%), Postives = 87/191 (45.55%), Query Frame = 2 Query: 1445 MLDSL----TMRYYGIGRPQQFGPTGIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLG-WGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMPEAPEAPGPSVGEAEA 2002
ML SL TM Y + + F I +D +++ V V ++ ++ L V+ S G W + S + +H W A W++F L + + S R T + L +LN+ VC +C +E+ SS + T C H+FHA CL +W+Y CPMC + E ++ + GE+ A
Sbjct: 415 MLTSLQVTGTMLIYSLFMVELFRSDPIESLDEVIYWVNAVSRVLEFVVALCVVAYGTWESLFGEWSWMGASVIIIHSYFNV----WLRAQSGWKSFLLRREAAKKINSLPRATPQQLQQLND---VCSICFQEM--SSAVITYCG---HFFHANCLRKWLYVQETCPMCHQTVQHAEPTQSQAGATGESPA 593
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: UPI00148F54A5 (RING finger protein 145 n=2 Tax=Eupercaria TaxID=1489922 RepID=UPI00148F54A5) HSP 1 Score: 66.2 bits (160), Expect = 1.980e-7 Identity = 55/191 (28.80%), Postives = 87/191 (45.55%), Query Frame = 2 Query: 1445 MLDSL----TMRYYGIGRPQQFGPTGIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLG-WGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMPEAPEAPGPSVGEAEA 2002
ML SL TM Y + + F I +D +++ V V ++ ++ L V+ S G W + S + +H W A W++F L + + S R TE+ L + N+ VC +C +E+ SS + T C H+FH CL +W+Y CPMC + P +PGP+ +A A
Sbjct: 415 MLTSLQVTGTMLIYSLFMVELFRSDPIESLDEVIYWVNAVSRVLEFVVALCVVAYGTWESLFGEWSWMGASVIIIHSYFNV----WLRAQSGWRSFLLRQEAAKKINSLPRATEQQLRQHND---VCSICFQEM--SSAVITYCG---HFFHGNCLRKWLYVQETCPMCHQTV----RPTSPGPASEDAPA 589
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: A0A673CHB6_9TELE (RING finger protein 145-like n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673CHB6_9TELE) HSP 1 Score: 65.9 bits (159), Expect = 2.230e-7 Identity = 56/189 (29.63%), Postives = 84/189 (44.44%), Query Frame = 2 Query: 1445 MLDSL----TMRYYGIGRPQQFGPTGIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLG-WGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILM-----PEAPEAPGP 1981
ML SL TM Y + + F I +D +++ V V ++ ++ L V+ S G W + S + +H W A W++F L + + S R T E L + N+ VC +C +E+ SS + T C H+FH CL +W+Y CPMC + PEAP AP P
Sbjct: 420 MLTSLQVTGTMLIYSLFMVELFRSDPIESLDEVIYWVNAVSRVLEFVVALCVVAYGTWESLFGEWSWMGASVIIIHSYFNV----WLRAQSGWRSFLLRQEAAKKINSLPRATTEQLQQHND---VCSICFQEM--SSAVITYCG---HFFHGNCLRKWLYVQETCPMCHQTVRPTPAPGPEAPGAPSP 596
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: UPI001C09FD4F (RING finger protein 145 isoform X1 n=3 Tax=Alosa TaxID=34772 RepID=UPI001C09FD4F) HSP 1 Score: 65.5 bits (158), Expect = 2.960e-7 Identity = 47/184 (25.54%), Postives = 82/184 (44.57%), Query Frame = 2 Query: 1460 TMRYYGIGRPQQFGPTGIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLG---FSGLGWGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMPEAPEAPGPSVGEAEA 2002
T+ YG+ + T I G+D +++ V GV ++ LL + V++ F W ++ +H + S+ W A W F L + R S R +++ +L + +VC +C +++ S + T C HYFH CL +W+Y CPMC + + + + P EA
Sbjct: 415 TLLIYGLFMLEVCLSTAISGLDEVVYYVNGVCRALEFLLAVCVVLYGAWECVFGEWSWLGASVLIVHSYCSV------WLRARAGWNNFLLRREAARKISSLPRASQQ---QLRDHNDVCAICYQDML--SAVITYCG---HYFHGNCLRKWLYVQETCPMCHSPVKQTPSDQTAAPESPRQEA 584
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: UPI0015B126A1 (RING finger protein 145 isoform X1 n=3 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015B126A1) HSP 1 Score: 65.1 bits (157), Expect = 4.590e-7 Identity = 47/165 (28.48%), Postives = 74/165 (44.85%), Query Frame = 2 Query: 1511 IFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLG-WGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMPEAPEAPGPSVGEAEA 2002
I +D +++ V V ++ L+ L V+ S LG W + S + +H W A W++F L + S R T+E L + N+ VC +C +E+ SS + T C H+FH CL +W+Y CPMC + +P+ P E A
Sbjct: 443 IDSLDEIIYCVNAVSRVLEFLVALCVVAYGTWESLLGEWSWMGASVIIIHSYFNV----WLRAQSGWRSFLLRREAAHKINSLPRATDEQLRRHND---VCAICFQEM--SSAVVTLCG---HFFHGNCLRKWLYVQETCPMCHQPVKPTASPQGPAAEAQEGAA 595 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1030.1.9 >prot_C-australica_Contig_1030.1.9 ID=prot_C-australica_Contig_1030.1.9|Name=mRNA_C-australica_Contig_1030.1.9|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=731bp MFGYPGLNLSPKEEELSPEDTIWLNYVFLLESSLLFTFLCAGSLFIGLLIback to top mRNA from alignment at C-australica_Contig_1030:181..4054+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1030.1.9 ID=mRNA_C-australica_Contig_1030.1.9|Name=mRNA_C-australica_Contig_1030.1.9|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3874bp|location=Sequence derived from alignment at C-australica_Contig_1030:181..4054+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1030:181..4054+ >mRNA_C-australica_Contig_1030.1.9 ID=mRNA_C-australica_Contig_1030.1.9|Name=mRNA_C-australica_Contig_1030.1.9|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=2193bp|location=Sequence derived from alignment at C-australica_Contig_1030:181..4054+ (Chrysoparadoxa australica CS_1217)back to top |