mRNA_C-australica_Contig_103.4.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_103.4.1 vs. uniprot
Match: D8LN74_ECTSI (Similar to past-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN74_ECTSI) HSP 1 Score: 128 bits (322), Expect = 4.560e-26 Identity = 93/279 (33.33%), Postives = 144/279 (51.61%), Query Frame = 1 Query: 2989 APDIKGETKQYTKDKLSPEGYWSVLEAKFGDR-LPDALPEVLKSLPKKKAEALQQHIDAN-TAVNEQGSMPESGEAGKQLAPDVKGATLLFKSGELNGNDYYHKVLSTAFPGAELDAMLPKLYGTLPVGKAAEIEAIAEGCNEEEVAERVLQAEQKEQEAKDEXXALREVEAKRRQAEEDGEVDDPWVVSIEDNKVYDKAFVKLDKNKDGFVTREEIAPLLK---ASNLDPSNAEQIFLLSDVDKKGALDRPAFARAYHLIRCVTKRDLQVPAKLPKAL 3810
+PD K TK++ + E Y +L A FG + L P++L LP +KA L + + AV+E + P + G +K AT +K GE+ +YY VL AF G +L MLP + LP +A + A+A+ A+ V RR AE+ + W +S++D +VYDKAFVKLDK++DG ++ E P+LK + L + ++ ++D+D+ G L R +A AYHL+RCV KR++++PA LP+ L
Sbjct: 1070 SPDFKQATKEFKNGDMEAEKYLPILRAAFGKKELAKMWPKLLPRLPPEKARELAEAAGLDFEAVSESATSPAPRQVG------LKDATASYKRGEMGAREYYENVLQEAF-GDKLAGMLPDILKALPPDRAEAVAAVAKAQ-----ADNV-----------------------RRLAED---TPNEWAMSLDDRRVYDKAFVKLDKDRDGLLSSVEARPVLKKAVGNRLGEAQLGDLWKMADIDRDGRLTREEWAIAYHLMRCVVKREMKLPATLPEVL 1310
BLAST of mRNA_C-australica_Contig_103.4.1 vs. uniprot
Match: A0A6H5L435_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L435_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 3.500e-15 Identity = 83/313 (26.52%), Postives = 139/313 (44.41%), Query Frame = 1 Query: 2827 ECLRPTYPGSLTKELPRLLQGFNNKKASDLQEVVLRLRDP-KAFAEMEKRLKLPPAPDIKGETKQYTKDKLSPEGYWSVL-------EAKFGDR-LPDALPEVLKSLPKKKAEALQQHIDAN-TAVNEQGSMPESGEAGKQLAPDVKGATLLFKSGELNGNDYYHKVLSTAFPGAELDAMLPKLYGTLPVGKAAEIEAIAEGCNEEEVAERVLQAEQKEQEAKDEXXALREVEAKRRQAEEDGEVDDPWVVSIEDNKVYDKAFVKLDKNKDGFVTREEIAPLLK---ASNLDPSNAEQIFLLSDVDKKGALDR 3726
+CLR G + LP +Q + A+++ E R P K + + K P D K TK + + Y ++ +A FG + L P++L LP +KA L + + A++E + P + G +K AT +K G++ +YY VL F G +L MLP + LP +A + A+A+ + +AE + W +S++D +VYDKAFVKLDK++DGF++ E P+LK ++L + ++ ++D+D+ G L R
Sbjct: 20 KCLRTPPIGRQDQHLPEEVQPGGGRNATNIPE-----RKPEKNPSTPTSKSKYSPPTDFKQATKDFKNGDMEANKYLPIIRVRLLWVKAAFGKKELAKMWPKLLPRLPPEKARELAEAAGLDFEALSESATSPAPRQVG------LKDATASYKRGDMGAREYYENVLLEVF-GDKLAGMLPDILKALPPDRAEALAAVAKADDVRRLAE---------------------------------DTPHEWAMSLDDRRVYDKAFVKLDKDRDGFLSSAEARPVLKKAVGNHLGEAQLGDLWKMADIDRDGRLTR 287
BLAST of mRNA_C-australica_Contig_103.4.1 vs. uniprot
Match: A0A3N4IKL9_ASCIM (Actin cytoskeleton-regulatory complex protein PAN1 n=1 Tax=Ascobolus immersus RN42 TaxID=1160509 RepID=A0A3N4IKL9_ASCIM) HSP 1 Score: 68.6 bits (166), Expect = 1.090e-7 Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 2047 TQDEREHYWEVFEKLDKDSSGKISGKEAVPLMGKSGLDQKQLAKVWRLADQDKCGELDRREWAIAMHLIKCKTEKELMIPKSLP 2298
T+DE++ Y VFE D G I G E++ + GKSGLD+K L ++W LAD G+LD+ E+A+AMHLI K IP LP
Sbjct: 556 TKDEKKIYDAVFEAWDGMGKGYIGGTESLEIFGKSGLDRKDLERIWNLADPSNRGKLDKNEFAVAMHLIYRKLNG-YEIPNHLP 638
BLAST of mRNA_C-australica_Contig_103.4.1 vs. uniprot
Match: A0A212FCS8_DANPL (Putative EH-domain-containing protein n=1 Tax=Danaus plexippus plexippus TaxID=278856 RepID=A0A212FCS8_DANPL) HSP 1 Score: 60.5 bits (145), Expect = 5.690e-7 Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 1 Query: 2056 EREHYWEVFEKLDKDSSGKISGKEAVPLMGKSGLDQKQLAKVWRLADQDKCGELDRREWAIAMHLIKCKTE 2268
E+ HY ++F+ L+ GK++G A M KS L L K+W+LAD DK G LD E+A+AMHLI+ KT+
Sbjct: 46 EKPHYDQIFQSLNP-MDGKVTGAAAKTEMLKSKLPNNVLGKIWKLADIDKDGFLDEEEFALAMHLIRVKTD 115
BLAST of mRNA_C-australica_Contig_103.4.1 vs. uniprot
Match: UPI00188F61A0 (EH domain-containing protein 3-like n=1 Tax=Manduca sexta TaxID=7130 RepID=UPI00188F61A0) HSP 1 Score: 60.1 bits (144), Expect = 7.210e-7 Identity = 34/70 (48.57%), Postives = 45/70 (64.29%), Query Frame = 1 Query: 2056 EREHYWEVFEKLDKDSSGKISGKEAVPLMGKSGLDQKQLAKVWRLADQDKCGELDRREWAIAMHLIKCKT 2265
E+ HY E+F+ L+ GK++G A M KS L L K+W+L+D DK G LD E+A+AMHLIK KT
Sbjct: 43 EKPHYDEIFKTLNP-IDGKVTGAAAKTEMVKSKLPNSVLGKIWKLSDIDKDGFLDEEEFALAMHLIKVKT 111
BLAST of mRNA_C-australica_Contig_103.4.1 vs. uniprot
Match: A0A7S4GI64_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GI64_9EUGL) HSP 1 Score: 62.0 bits (149), Expect = 1.570e-6 Identity = 33/71 (46.48%), Postives = 44/71 (61.97%), Query Frame = 1 Query: 2095 KDSSGKISGKEAVPLMGKSGLDQKQLAKVWRLADQDKCGELDRREWAIAMHLIKCKTEKELMIPKSLPICL 2307
KD +SG A L KSGL+ + L K+W+LAD DK GELD+ E+ IA HLI + +K +P+ LP L
Sbjct: 37 KDLPNAVSGNAARELFKKSGLNNEVLFKIWKLADVDKNGELDKEEFMIAAHLISVEVKKLATVPEVLPSSL 107
BLAST of mRNA_C-australica_Contig_103.4.1 vs. uniprot
Match: UPI001B36CB72 (uncharacterized protein n=1 Tax=Cryphonectria parasitica EP155 TaxID=660469 RepID=UPI001B36CB72) HSP 1 Score: 63.9 bits (154), Expect = 2.660e-6 Identity = 33/84 (39.29%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 2047 TQDEREHYWEVFEKLDKDSSGKISGKEAVPLMGKSGLDQKQLAKVWRLADQDKCGELDRREWAIAMHLIKCKTEKELMIPKSLP 2298
T +++ + ++++ LDK G I+G+EAVP +S L + LA +W LAD G L+R E+A+AM+LI+ + K+ +P+SLP
Sbjct: 296 TPADKQRFDQIYDGLDKQKKGYITGEEAVPFFSQSNLSEAVLANIWDLADVRSEGILNRDEFAVAMYLIRQQRSKQGDLPQSLP 379
BLAST of mRNA_C-australica_Contig_103.4.1 vs. uniprot
Match: A0A1S3H557_LINUN (epidermal growth factor receptor substrate 15-like 1 isoform X1 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3H557_LINUN) HSP 1 Score: 63.2 bits (152), Expect = 4.200e-6 Identity = 79/303 (26.07%), Postives = 134/303 (44.22%), Query Frame = 1 Query: 2056 EREHYWEVFEKLDKDSSGKISGKEAVPLMGKSGLDQKQLAKVWRLADQDKCGELDRREWAIAMHLIKCKTEKELMIPKSLPICLGGAEKPK------------VEKAPDQKK-------ERRDSDGSAMSTASAKGSKGKAQPPKMDPYVMTPSEKGTYDMLFAKLKRDKKKKSKALKAAALKELTRK---KGGYPKEDALHVYSLVDPHGTNMLDSLQWATLVHILACCATKGLELPTTI-PKILAAELDKRPQEARYDLKEGTAFYKKGKITAETYYMECLRPTYPGSLTK--ELPRLLQG 2889
E+ Y ++F+ L + GK+SG + P++ S L L +VW L+D DK G+LDR E+AIAMHL+ E + +P +LP L K + V P R S + AS G P P+V+ +E+ ++ LF +D + L R + G ++ H+++L D GT L+S Q+A +H++ G+E P T+ P+++ + +R G+ +Y ++T+ + + +P Y GS T +L +QG
Sbjct: 127 EKAKYDQIFDGL-QPIDGKLSGDKVRPMLLNSKLPVDVLGRVWDLSDIDKDGQLDREEFAIAMHLVYRALEND-PVPPALPTNLVPPSKRRSRANSGVNLPGAVPVLPSMSGGGAPTLLPGRSSPAMGSTAASTDLHSGMTSPGPQLPWVVPQAERAKFEALFKTADKD-------MDGFVLGGEVRDIFIQSGLSQQVLAHIWTLCDIKGTGKLNSDQFALAMHLIQQ-KLNGVEPPQTLAPEMIPPSMRER---------SGSLYYLHQRVTSVSPTYQMTQP-YHGSPTHRAQLSHTIQG 409
BLAST of mRNA_C-australica_Contig_103.4.1 vs. uniprot
Match: A0A024GCL4_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GCL4_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 4.970e-6 Identity = 34/91 (37.36%), Postives = 53/91 (58.24%), Query Frame = 1 Query: 3541 WVVSIEDNKVYDKAFVKLDKNKDGFVTREEIAPLLKASNLDPSNAEQIFLLSDVDKKGALDRPAFARAYHLIRCVTKRDLQVPAKLPKALE 3813
+ V+ ++ K Y+ F++ D + DGFV+ E L + S LD +I+ L+D + G L+ F+ A HLI C++KR L +PA LP LE
Sbjct: 55 FAVTEDEKKKYEAIFMQTDVDHDGFVSGAEAVGLFQKSGLDRRVLREIWNLADRSQDGRLNADEFSVAMHLIVCISKRGLPLPASLPIELE 145
BLAST of mRNA_C-australica_Contig_103.4.1 vs. uniprot
Match: A0A0P1A6M0_PLAHL (Transcription factor n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6M0_PLAHL) HSP 1 Score: 62.8 bits (151), Expect = 6.330e-6 Identity = 32/91 (35.16%), Postives = 49/91 (53.85%), Query Frame = 1 Query: 3538 PWVVSIEDNKVYDKAFVKLDKNKDGFVTREEIAPLLKASNLDPSNAEQIFLLSDVDKKGALDRPAFARAYHLIRCVTKRDLQVPAKLPKAL 3810
P+ +S ++ YD F + D ++DGF+ E L + S LD I+ ++D+ + L F A HLI CV+KR L +PA LP+ L
Sbjct: 683 PYALSADEKSKYDNIFQQYDTDRDGFIMGSEAVTLFQMSGLDRIVLRNIWSMADITQDSKLSAQEFYVAMHLIVCVSKRGLPMPATLPREL 773 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_103.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_103.4.1 >prot_C-australica_Contig_103.4.1 ID=prot_C-australica_Contig_103.4.1|Name=mRNA_C-australica_Contig_103.4.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=1271bp MERNNVEGLRREFLSHGRDVMCSLRTSSGLSLVHLAAMYGQPDMMNFLKEback to top mRNA from alignment at C-australica_Contig_103:5703..16145- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_103.4.1 ID=mRNA_C-australica_Contig_103.4.1|Name=mRNA_C-australica_Contig_103.4.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=10443bp|location=Sequence derived from alignment at C-australica_Contig_103:5703..16145- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_103:5703..16145- >mRNA_C-australica_Contig_103.4.1 ID=mRNA_C-australica_Contig_103.4.1|Name=mRNA_C-australica_Contig_103.4.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=3813bp|location=Sequence derived from alignment at C-australica_Contig_103:5703..16145- (Chrysoparadoxa australica CS_1217)back to top |