mRNA_C-australica_Contig_10295.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10295.1.1 vs. uniprot
Match: A0A6B3M9S7_9CYAN (Glycosyltransferase n=1 Tax=Symploca sp. SIO2E9 TaxID=2607812 RepID=A0A6B3M9S7_9CYAN) HSP 1 Score: 60.8 bits (146), Expect = 2.230e-9 Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 1 Query: 1 VIEKIIEVDNDDDLYLAYLNAPKMKENTLNEFVNKDNILKQFEKIFDSNTPK 156 +IEKIIE+D +DDLYL YL P +N +N+F++ NILKQF+ IF NTPK Sbjct: 255 LIEKIIEIDQNDDLYLEYLKQPYFVDNQINQFIDPQNILKQFDYIF--NTPK 304
BLAST of mRNA_C-australica_Contig_10295.1.1 vs. uniprot
Match: A0A846F7I6_9CYAN (Glycosyltransferase n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846F7I6_9CYAN) HSP 1 Score: 60.1 bits (144), Expect = 4.210e-9 Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 1 Query: 1 VIEKIIEVDNDDDLYLAYLNAPKMKENTLNEFVNKDNILKQFEKIFDSNTPK 156 +IEKI+E+D +DD YL YL P NT+N F+N NIL QF++IF NTPK Sbjct: 255 LIEKIVELDQNDDAYLEYLKQPNFTNNTVNHFINPKNILDQFDRIF--NTPK 304
BLAST of mRNA_C-australica_Contig_10295.1.1 vs. uniprot
Match: A0A3N0ZLY0_9BACT (Glycosyltransferase n=1 Tax=Bacteroidetes/Chlorobi group bacterium ChocPot_Mid TaxID=2382230 RepID=A0A3N0ZLY0_9BACT) HSP 1 Score: 58.9 bits (141), Expect = 1.130e-8 Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 1 Query: 1 VIEKIIEVDNDDDLYLAYLNAPKMKENTLNEFVNKDNILKQFEKIFDSN 147 +IEKIIE+D +DDLY YL P N LN+FV K+NIL QF++IF ++ Sbjct: 232 LIEKIIEIDKNDDLYFQYLKEPNFVNNELNQFVKKENILNQFDRIFKND 280
BLAST of mRNA_C-australica_Contig_10295.1.1 vs. uniprot
Match: A0A8J6NMB4_9CHLR (Glycosyltransferase n=1 Tax=Candidatus Desulfolinea nitratireducens TaxID=2841698 RepID=A0A8J6NMB4_9CHLR) HSP 1 Score: 58.5 bits (140), Expect = 1.550e-8 Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 1 Query: 1 VIEKIIEVDNDDDLYLAYLNAPKMKENTLNEFVNKDNILKQFEKIF-DSNTP 153 V+E+IIE+DN+DDLY YLN P N NE+VN++NIL +FE+IF + N P Sbjct: 231 VVERIIEIDNNDDLYKEYLNEPVFLGNVENEYVNEENILDRFEEIFANKNIP 282
BLAST of mRNA_C-australica_Contig_10295.1.1 vs. uniprot
Match: A0A2W4I034_9BACT (Glycosyltransferase n=2 Tax=Candidatus Margulisbacteria TaxID=1817808 RepID=A0A2W4I034_9BACT) HSP 1 Score: 54.3 bits (129), Expect = 4.680e-7 Identity = 25/45 (55.56%), Postives = 34/45 (75.56%), Query Frame = 1 Query: 1 VIEKIIEVDNDDDLYLAYLNAPKMKENTLNEFVNKDNILKQFEKI 135 +IEK+IE+D +DD Y+ Y+ P K NTLNEF+N + ILKQF+ I Sbjct: 230 LIEKVIELDKNDDHYIEYVKQPFYKNNTLNEFINPEKILKQFDYI 274
BLAST of mRNA_C-australica_Contig_10295.1.1 vs. uniprot
Match: A0A8J7E1P8_9CYAN (Glycosyltransferase n=1 Tax=Lusitaniella coriacea LEGE 07157 TaxID=945747 RepID=A0A8J7E1P8_9CYAN) HSP 1 Score: 52.8 bits (125), Expect = 1.730e-6 Identity = 23/48 (47.92%), Postives = 35/48 (72.92%), Query Frame = 1 Query: 1 VIEKIIEVDNDDDLYLAYLNAPKMKENTLNEFVNKDNILKQFEKIFDS 144 +IE+I+E+D +DDLYL YL P N +N F++ N+LKQF+ IF++ Sbjct: 255 LIERIVEIDRNDDLYLEYLKQPYFAGNRVNPFIDASNVLKQFDYIFNN 302
BLAST of mRNA_C-australica_Contig_10295.1.1 vs. uniprot
Match: A0A7C4P7P1_9BACT (Glycosyltransferase n=1 Tax=Ignavibacteria bacterium TaxID=2053306 RepID=A0A7C4P7P1_9BACT) HSP 1 Score: 52.4 bits (124), Expect = 2.420e-6 Identity = 24/48 (50.00%), Postives = 36/48 (75.00%), Query Frame = 1 Query: 1 VIEKIIEVDNDDDLYLAYLNAPKMKENTLNEFVNKDNILKQFEKIFDS 144 +I+KIIE+D +DDLY+ L P +N LN+FV D IL+QF++IF++ Sbjct: 231 LIDKIIEIDKNDDLYIEILRQPYFTDNKLNKFVRSDLILQQFKRIFET 278
BLAST of mRNA_C-australica_Contig_10295.1.1 vs. uniprot
Match: A0A1S9PAU2_9SPHI (FucT_N domain-containing protein n=1 Tax=Mucilaginibacter pedocola TaxID=1792845 RepID=A0A1S9PAU2_9SPHI) HSP 1 Score: 52.0 bits (123), Expect = 3.290e-6 Identity = 26/57 (45.61%), Postives = 38/57 (66.67%), Query Frame = 1 Query: 1 VIEKIIEVDNDDDLYLAYLNAPKMKENTLNEFVNKDNILKQFEKIFDSNTPKRSFLR 171 VIE +I VDNDD+LY YL P + +NE+VN+DNILK+ ++I + ++ LR Sbjct: 228 VIEHVIAVDNDDELYKQYLREPVFTNDEVNEYVNEDNILKRLDEIVAYHFNRKRKLR 284
BLAST of mRNA_C-australica_Contig_10295.1.1 vs. uniprot
Match: A0A2V5X6A3_9BACT (Glycosyltransferase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5X6A3_9BACT) HSP 1 Score: 50.4 bits (119), Expect = 1.140e-5 Identity = 22/53 (41.51%), Postives = 36/53 (67.92%), Query Frame = 1 Query: 1 VIEKIIEVDNDDDLYLAYLNAPKMKENTLNEFVNKDNILKQFEKIFDSNTPKR 159 +I++I+E+D DD LYL YL P +N NEF +++ +L QF++IF + P + Sbjct: 232 LIDRILEIDCDDSLYLEYLRQPFFHDNLPNEFFSRERLLAQFDRIFSTPIPPK 284
BLAST of mRNA_C-australica_Contig_10295.1.1 vs. uniprot
Match: A0A1I6XTG3_9BACT (Glycosyltransferase family 10 (Fucosyltransferase) C-term n=1 Tax=Algoriphagus locisalis TaxID=305507 RepID=A0A1I6XTG3_9BACT) HSP 1 Score: 49.3 bits (116), Expect = 2.970e-5 Identity = 25/52 (48.08%), Postives = 36/52 (69.23%), Query Frame = 1 Query: 1 VIEKIIEVDNDDDLYLAYLNAPKMKENTLNEFVNKDNILKQFEKIFDSN-TP 153 VI KIIE+D DD+ YLA +N P +N++N+F+++ NIL +F SN TP Sbjct: 241 VISKIIELDQDDEKYLAMVNEPVFYQNSINKFIDRGNILLFLNDLFSSNKTP 292 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10295.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10295.1.1 >prot_C-australica_Contig_10295.1.1 ID=prot_C-australica_Contig_10295.1.1|Name=mRNA_C-australica_Contig_10295.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=61bp VIEKIIEVDNDDDLYLAYLNAPKMKENTLNEFVNKDNILKQFEKIFDSNTback to top mRNA from alignment at C-australica_Contig_10295:2..184+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10295.1.1 ID=mRNA_C-australica_Contig_10295.1.1|Name=mRNA_C-australica_Contig_10295.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=183bp|location=Sequence derived from alignment at C-australica_Contig_10295:2..184+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10295:2..184+ >mRNA_C-australica_Contig_10295.1.1 ID=mRNA_C-australica_Contig_10295.1.1|Name=mRNA_C-australica_Contig_10295.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=183bp|location=Sequence derived from alignment at C-australica_Contig_10295:2..184+ (Chrysoparadoxa australica CS_1217)back to top |