mRNA_C-australica_Contig_10274.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10274.1.1 vs. uniprot
Match: A0A222E5E5_9RHOB (Tuberculostearic acid methyltransferase UfaA1 n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E5E5_9RHOB) HSP 1 Score: 403 bits (1035), Expect = 3.740e-139 Identity = 191/197 (96.95%), Postives = 194/197 (98.48%), Query Frame = 1 Query: 1 MYLTDTLGQADLPRYFARVFDLARRMQRGRLDFVLQDGRVFRAEGREAGPVAELHLLNNDVFARLIREGDLGFCEAYLDEWWSTPDLMGFLDLVHANEEMFDAYPGGGVVRAWERVRFWLQSNSKRQAKKNIAHHYDLGNAFYGLWLDETMTYSSAMFETGQEGLERAQELKYASMIDQMGAQPGDHVLEIGCGWGG 591 MYLTDT GQADLPRYFARVFDLAR MQRGRLDFVLQDGR+FRAEGREAGPVAELHLLNNDVFARLIREGDL FCEAYLD+WWSTPDLMGFLDLVHANEEMFDAYPGGGVVRAWERVRFWLQSNSKRQAKKNIAHHYDLGNAFYGLWLDETMTYSSA+FETGQEGLERAQELKYASMIDQMGAQPGDHVLEIGCGWGG Sbjct: 1 MYLTDTHGQADLPRYFARVFDLARSMQRGRLDFVLQDGRMFRAEGREAGPVAELHLLNNDVFARLIREGDLAFCEAYLDKWWSTPDLMGFLDLVHANEEMFDAYPGGGVVRAWERVRFWLQSNSKRQAKKNIAHHYDLGNAFYGLWLDETMTYSSALFETGQEGLERAQELKYASMIDQMGAQPGDHVLEIGCGWGG 197
BLAST of mRNA_C-australica_Contig_10274.1.1 vs. uniprot
Match: A0A238L0V6_9RHOB (Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238L0V6_9RHOB) HSP 1 Score: 359 bits (921), Expect = 7.750e-122 Identity = 169/197 (85.79%), Postives = 180/197 (91.37%), Query Frame = 1 Query: 1 MYLTDTLGQADLPRYFARVFDLARRMQRGRLDFVLQDGRVFRAEGREAGPVAELHLLNNDVFARLIREGDLGFCEAYLDEWWSTPDLMGFLDLVHANEEMFDAYPGGGVVRAWERVRFWLQSNSKRQAKKNIAHHYDLGNAFYGLWLDETMTYSSAMFETGQEGLERAQELKYASMIDQMGAQPGDHVLEIGCGWGG 591 M+LTDT G DLPRYF RVFD+AR M+RGRLDFVLQDGRVFRAEGR GPVAEL L N+D+FARLIREGDLGFCEAYLDEWWSTPDLM FLDLVHANEEMFD YPGGG+VRA+ER RFWLQSNS+RQA+KNIAHHYDLGN FY LWLDETMTYSSA+F TGQE LE+AQELKYASMIDQMGA PGDHVLEIGCGWGG Sbjct: 1 MHLTDTHGHTDLPRYFGRVFDMARGMERGRLDFVLQDGRVFRAEGRAPGPVAELRLHNDDIFARLIREGDLGFCEAYLDEWWSTPDLMAFLDLVHANEEMFDGYPGGGLVRAFERFRFWLQSNSRRQARKNIAHHYDLGNDFYRLWLDETMTYSSALFVTGQESLEKAQELKYASMIDQMGAVPGDHVLEIGCGWGG 197
BLAST of mRNA_C-australica_Contig_10274.1.1 vs. uniprot
Match: A0A0B3RRR4_9RHOB (Cyclopropane-fatty-acyl-phospholipid synthase n=7 Tax=Rhodobacterales TaxID=204455 RepID=A0A0B3RRR4_9RHOB) HSP 1 Score: 356 bits (913), Expect = 1.270e-120 Identity = 166/197 (84.26%), Postives = 179/197 (90.86%), Query Frame = 1 Query: 1 MYLTDTLGQADLPRYFARVFDLARRMQRGRLDFVLQDGRVFRAEGREAGPVAELHLLNNDVFARLIREGDLGFCEAYLDEWWSTPDLMGFLDLVHANEEMFDAYPGGGVVRAWERVRFWLQSNSKRQAKKNIAHHYDLGNAFYGLWLDETMTYSSAMFETGQEGLERAQELKYASMIDQMGAQPGDHVLEIGCGWGG 591 M LTDT GQ LPRYFARVFD+AR M GRLDFVL+DGRVFRAEGR GPVAELHL ++D+FARLIREGDLGFCEAYLD WWSTPDLM FLDLVHANEEMFD YPGGG+VR WER RFW+QSNS++QAKKNIAHHYDLGN FYGLWLD+TMTYSSA+F TGQE LE+AQELKYASMIDQMGA+PGDHVLEIGCGWGG Sbjct: 1 MLLTDTQGQERLPRYFARVFDMARGMGSGRLDFVLRDGRVFRAEGRVPGPVAELHLHHDDIFARLIREGDLGFCEAYLDGWWSTPDLMAFLDLVHANEEMFDGYPGGGLVRMWERFRFWMQSNSRKQAKKNIAHHYDLGNDFYGLWLDDTMTYSSALFRTGQESLEKAQELKYASMIDQMGAKPGDHVLEIGCGWGG 197
BLAST of mRNA_C-australica_Contig_10274.1.1 vs. uniprot
Match: A0A0P1GQC6_9RHOB (Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Tropicibacter naphthalenivorans TaxID=441103 RepID=A0A0P1GQC6_9RHOB) HSP 1 Score: 332 bits (852), Expect = 2.270e-111 Identity = 153/197 (77.66%), Postives = 172/197 (87.31%), Query Frame = 1 Query: 1 MYLTDTLGQADLPRYFARVFDLARRMQRGRLDFVLQDGRVFRAEGREAGPVAELHLLNNDVFARLIREGDLGFCEAYLDEWWSTPDLMGFLDLVHANEEMFDAYPGGGVVRAWERVRFWLQSNSKRQAKKNIAHHYDLGNAFYGLWLDETMTYSSAMFETGQEGLERAQELKYASMIDQMGAQPGDHVLEIGCGWGG 591 M LTDT Q +LPRYF+ VFD+A +M GRLDFVL DGR FRAEG+ GPVAEL + N D+FARLIREGDLGFCEAY+D WWSTPDLMGF+ LVHAN+EM+D +PG G+VRA+E+VRFW QSNSKRQAKKNI+HHYDLGN FYGLWLD+TMTYSSA+FETGQE LE AQ KYASM+DQMGAQPGDHVLEIGCGWGG Sbjct: 1 MILTDTRDQTNLPRYFSHVFDMANQMDHGRLDFVLPDGRRFRAEGKAPGPVAELDIHNPDIFARLIREGDLGFCEAYVDGWWSTPDLMGFMHLVHANDEMYDGFPGMGLVRAFEKVRFWFQSNSKRQAKKNISHHYDLGNEFYGLWLDDTMTYSSALFETGQESLENAQTAKYASMVDQMGAQPGDHVLEIGCGWGG 197
BLAST of mRNA_C-australica_Contig_10274.1.1 vs. uniprot
Match: A0A2G8RB78_9RHOB (Uncharacterized protein n=2 Tax=Puniceibacterium antarcticum TaxID=1206336 RepID=A0A2G8RB78_9RHOB) HSP 1 Score: 329 bits (844), Expect = 8.990e-110 Identity = 149/198 (75.25%), Postives = 175/198 (88.38%), Query Frame = 1 Query: 1 MYLTDTLGQADLPRYFARVFDLARRMQRGRLDFVLQDGRVFRAEGREAGPVAELHLLNNDVFARLIREGDLGFCEAYLDEWWSTPDLMGFLDLVHA-NEEMFDAYPGGGVVRAWERVRFWLQSNSKRQAKKNIAHHYDLGNAFYGLWLDETMTYSSAMFETGQEGLERAQELKYASMIDQMGAQPGDHVLEIGCGWGG 591 M LTDT Q DLPRYFARVF+++R M +GR+DFVL DGRVFRAEGR GPVAEL + N D+FARLIREGDLGFC+AYLD+WWS+PDL+ F+ LVHA N++++D +PG G+VRA+E +RFWLQSNSKRQA+KNI+HHYDLGN FYGLWLDETMTYSSA+FETGQE +E+AQ KYASM+DQMG QPGDHVLEIGCGWGG Sbjct: 28 MILTDTKDQKDLPRYFARVFEMSRNMNKGRIDFVLPDGRVFRAEGRNPGPVAELQIHNKDIFARLIREGDLGFCDAYLDKWWSSPDLLAFMQLVHADNDDIYDGFPGAGLVRAYENLRFWLQSNSKRQARKNISHHYDLGNEFYGLWLDETMTYSSALFETGQESMEKAQIAKYASMVDQMGVQPGDHVLEIGCGWGG 225
BLAST of mRNA_C-australica_Contig_10274.1.1 vs. uniprot
Match: A0A2T6B2F5_9RHOB (Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Allosediminivita pacifica TaxID=1267769 RepID=A0A2T6B2F5_9RHOB) HSP 1 Score: 327 bits (837), Expect = 4.560e-109 Identity = 152/198 (76.77%), Postives = 172/198 (86.87%), Query Frame = 1 Query: 1 MYLTDTLGQADLPRYFARVFDLARRMQRGRLDFVLQDGRVFRAEGREAGPVAELHLLNNDVFARLIREGDLGFCEAYLDEWWSTPDLMGFLDLVHA-NEEMFDAYPGGGVVRAWERVRFWLQSNSKRQAKKNIAHHYDLGNAFYGLWLDETMTYSSAMFETGQEGLERAQELKYASMIDQMGAQPGDHVLEIGCGWGG 591 M TDT GQ DLPRYF +VF +A M GRLDFVL DGR FRAEGR GPVAELH+ N D+FARLIREGDLGFCEAY+D WWSTPDLM F+DLVHA N+E++D +PG G++RA+E+ RFWLQSNS+RQAKKNIAHHYDLGN FYGLWLD+TMTYSSA+FETGQE LE+AQ KYASM+DQMGA+PGDHVLEIGCGWGG Sbjct: 1 MIYTDTKGQKDLPRYFGQVFAMACDMAHGRLDFVLPDGRCFRAEGRAPGPVAELHIHNPDIFARLIREGDLGFCEAYMDGWWSTPDLMAFMDLVHADNDEIYDGFPGQGLLRAYEKARFWLQSNSRRQAKKNIAHHYDLGNEFYGLWLDDTMTYSSALFETGQEDLEKAQIAKYASMVDQMGAKPGDHVLEIGCGWGG 198
BLAST of mRNA_C-australica_Contig_10274.1.1 vs. uniprot
Match: W4HGI8_9RHOB (Cyclopropane-fatty-acyl-phospholipid synthase n=3 Tax=Roseivivax marinus TaxID=1379903 RepID=W4HGI8_9RHOB) HSP 1 Score: 325 bits (833), Expect = 1.960e-108 Identity = 150/196 (76.53%), Postives = 174/196 (88.78%), Query Frame = 1 Query: 7 LTDTLGQADLPRYFARVFDLARRMQRGRLDFVLQDGRVFRAEGREAGPVAELHLLNNDVFARLIREGDLGFCEAYLDEWWSTPDLMGFLDLVHA-NEEMFDAYPGGGVVRAWERVRFWLQSNSKRQAKKNIAHHYDLGNAFYGLWLDETMTYSSAMFETGQEGLERAQELKYASMIDQMGAQPGDHVLEIGCGWGG 591 LTDT GQ LPRYFARVF++A+ + RGR+DFVL DGR FRAEG E GPVAE+ + N D+FARL+REGDLGFC+AYLD+WWSTPDLM F+DLVHA NE+++D +PG G+VR +E+ RFWLQSNSK QA++NIAHHYDLGN FYGLWLD+TMTYSSA+FETGQE LERAQE KYASMIDQMGA+PGDHVLEIGCGWGG Sbjct: 6 LTDTAGQGGLPRYFARVFEMAQGLNRGRIDFVLPDGRRFRAEGHEPGPVAEVWVHNPDLFARLLREGDLGFCDAYLDQWWSTPDLMAFMDLVHADNEDIYDGFPGIGLVRTYEKFRFWLQSNSKAQARRNIAHHYDLGNDFYGLWLDDTMTYSSALFETGQESLERAQEAKYASMIDQMGARPGDHVLEIGCGWGG 201
BLAST of mRNA_C-australica_Contig_10274.1.1 vs. uniprot
Match: A0A1X6Z5V3_9RHOB (Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Roseivivax jejudonensis TaxID=1529041 RepID=A0A1X6Z5V3_9RHOB) HSP 1 Score: 323 bits (827), Expect = 1.450e-107 Identity = 150/198 (75.76%), Postives = 174/198 (87.88%), Query Frame = 1 Query: 1 MYLTDTLGQADLPRYFARVFDLARRMQRGRLDFVLQDGRVFRAEGREAGPVAELHLLNNDVFARLIREGDLGFCEAYLDEWWSTPDLMGFLDLVHA-NEEMFDAYPGGGVVRAWERVRFWLQSNSKRQAKKNIAHHYDLGNAFYGLWLDETMTYSSAMFETGQEGLERAQELKYASMIDQMGAQPGDHVLEIGCGWGG 591 M LT+T GQADLPRYF +VF + M RGR+DFVL DGR FRAEGR GP+AE+ + N+D+FARLIREGDLGF EAYLD WWSTPDLM F+DL+HA N++++D + G G+VRA+ERVRFWLQSNS+RQA++NIAHHYDLGNAFYGLWLDETMTYSSA+FETGQE LERAQ KYASM+DQMGA+PGDHVLEIGCGWGG Sbjct: 1 MILTETAGQADLPRYFPQVFAATQGMNRGRVDFVLDDGRTFRAEGRNPGPIAEVQIHNDDLFARLIREGDLGFSEAYLDGWWSTPDLMAFMDLIHADNDDLYDDFSGIGLVRAFERVRFWLQSNSRRQARRNIAHHYDLGNAFYGLWLDETMTYSSALFETGQESLERAQMSKYASMVDQMGARPGDHVLEIGCGWGG 198
BLAST of mRNA_C-australica_Contig_10274.1.1 vs. uniprot
Match: A0A1W2BNE0_9RHOB (Cyclopropane-fatty-acyl-phospholipid synthase n=3 Tax=Primorskyibacter TaxID=1068904 RepID=A0A1W2BNE0_9RHOB) HSP 1 Score: 322 bits (825), Expect = 2.910e-107 Identity = 149/198 (75.25%), Postives = 172/198 (86.87%), Query Frame = 1 Query: 1 MYLTDTLGQADLPRYFARVFDLARRMQRGRLDFVLQDGRVFRAEGREAGPVAELHLLNNDVFARLIREGDLGFCEAYLDEWWSTPDLMGFLDLVHA-NEEMFDAYPGGGVVRAWERVRFWLQSNSKRQAKKNIAHHYDLGNAFYGLWLDETMTYSSAMFETGQEGLERAQELKYASMIDQMGAQPGDHVLEIGCGWGG 591 M LT T Q DLPRYFARVFD+A+ M RGR+DFVL DGR+FRAEGR GPVA+L + N D+FARLIR+GDLGF +AYLDEWWSTPDLM F+DL+HA N+ +FD +PG G+VRA+ER RFWL SNS+RQAKKNIAHHYDLGN FYGLWLDETMTYSSA+FETGQE LE+AQ KYA ++D+MGA+PGDHVLEIGCGWGG Sbjct: 1 MILTTTQNQPDLPRYFARVFDIAQGMNRGRIDFVLPDGRIFRAEGRAPGPVAQLDIHNPDIFARLIRDGDLGFSDAYLDEWWSTPDLMAFMDLIHADNDVIFDGFPGMGLVRAFERARFWLHSNSRRQAKKNIAHHYDLGNDFYGLWLDETMTYSSALFETGQESLEKAQIAKYAQLVDEMGAKPGDHVLEIGCGWGG 198
BLAST of mRNA_C-australica_Contig_10274.1.1 vs. uniprot
Match: A0A5P8YYH6_9RHOB (Cyclopropane-fatty-acyl-phospholipid synthase n=2 Tax=Roseivivax TaxID=93682 RepID=A0A5P8YYH6_9RHOB) HSP 1 Score: 321 bits (822), Expect = 8.280e-107 Identity = 149/198 (75.25%), Postives = 173/198 (87.37%), Query Frame = 1 Query: 1 MYLTDTLGQADLPRYFARVFDLARRMQRGRLDFVLQDGRVFRAEGREAGPVAELHLLNNDVFARLIREGDLGFCEAYLDEWWSTPDLMGFLDLVHA-NEEMFDAYPGGGVVRAWERVRFWLQSNSKRQAKKNIAHHYDLGNAFYGLWLDETMTYSSAMFETGQEGLERAQELKYASMIDQMGAQPGDHVLEIGCGWGG 591 M LT+T GQ +LPRYFA+VF +AR M GR+DFVL DGRVFRA+GR GPV+EL + N D+FARLIREGD+GFCEAYLD WWSTPDLM F++LVHA NE+++D +PG +V+ +E +RFW QSNSKRQAKKNI+HHYDLGN FYGLWLD+TMTYSSA FETGQE LERAQELKYASMID+MGA+PGDHVLEIGCGWGG Sbjct: 1 MILTETTGQPNLPRYFAQVFGMARDMNNGRIDFVLPDGRVFRAQGRNPGPVSELRIHNPDLFARLIREGDMGFCEAYLDGWWSTPDLMAFMELVHADNEDIYDGFPGMKLVKLYENLRFWWQSNSKRQAKKNISHHYDLGNDFYGLWLDDTMTYSSAKFETGQESLERAQELKYASMIDEMGAKPGDHVLEIGCGWGG 198 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10274.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10274.1.1 >prot_C-australica_Contig_10274.1.1 ID=prot_C-australica_Contig_10274.1.1|Name=mRNA_C-australica_Contig_10274.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=197bp MYLTDTLGQADLPRYFARVFDLARRMQRGRLDFVLQDGRVFRAEGREAGPback to top mRNA from alignment at C-australica_Contig_10274:1..591- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10274.1.1 ID=mRNA_C-australica_Contig_10274.1.1|Name=mRNA_C-australica_Contig_10274.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=591bp|location=Sequence derived from alignment at C-australica_Contig_10274:1..591- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10274:1..591- >mRNA_C-australica_Contig_10274.1.1 ID=mRNA_C-australica_Contig_10274.1.1|Name=mRNA_C-australica_Contig_10274.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=591bp|location=Sequence derived from alignment at C-australica_Contig_10274:1..591- (Chrysoparadoxa australica CS_1217)back to top |