mRNA_C-australica_Contig_10269.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10269.1.1 vs. uniprot
Match: UPI0003B348B2 (S41 family peptidase n=1 Tax=Oceanicaulis alexandrii TaxID=153233 RepID=UPI0003B348B2) HSP 1 Score: 488 bits (1256), Expect = 3.890e-170 Identity = 247/276 (89.49%), Postives = 258/276 (93.48%), Query Frame = 1 Query: 1 HTRIEGFNPGFVDYMSDEALVFPLSFEVRDGEVIVTQAPSGSSVRRGDRIVSLQGASNADWLARLTRNISADTPALAYSQMQGMELYYIWLEYGPLSRFTLELEDAVGVRRQVELDALPMAALSDREGLERIDLSGRDARMLTGDIAYLRPGPFYNTAAQTAQEAYDPEALAAYTAFIDAAFEDFIDQGAQALILDVRDNPGGDNSWSDPVISWFADRPFRFASEFRIRVSDLSTASNQARLDAAPAGPSSTSQMLADLYDSAPNGETVSFEVPYA 828 HTRIEGFNPGF+DYMSDEALVFPL FEVR+GEVIVTQAP+GSSVR GDRI+ L+GASNADWLARLTRNISADTPALAYSQMQGMELYYIWLEYGP RFTLELEDA GVRRQVELDA+PMAALSDREG+ERIDLSGRDARMLTGDIAYLRPGPFYNTAAQT QEAYDPEALAAYTAFID AFE FID GAQALILDVRDNPGGDNSWSDPVISWFADRPFRFASEFRIRVS+ +TASNQAR+D G SS SQ LADLYDSAPNGETVSFE+PYA Sbjct: 92 HTRIEGFNPGFLDYMSDEALVFPLGFEVREGEVIVTQAPTGSSVRPGDRIMMLEGASNADWLARLTRNISADTPALAYSQMQGMELYYIWLEYGPRPRFTLELEDAAGVRRQVELDAVPMAALSDREGVERIDLSGRDARMLTGDIAYLRPGPFYNTAAQTPQEAYDPEALAAYTAFIDDAFERFIDHGAQALILDVRDNPGGDNSWSDPVISWFADRPFRFASEFRIRVSEQTTASNQARIDTTSEGVSSISQTLADLYDSAPNGETVSFELPYA 367
BLAST of mRNA_C-australica_Contig_10269.1.1 vs. uniprot
Match: A3UJQ1_9PROT (TSPc domain-containing protein n=2 Tax=unclassified Oceanicaulis TaxID=2632123 RepID=A3UJQ1_9PROT) HSP 1 Score: 349 bits (896), Expect = 1.390e-115 Identity = 175/276 (63.41%), Postives = 220/276 (79.71%), Query Frame = 1 Query: 1 HTRIEGFNPGFVDYMSDE-ALVFPLSFEVRDGEVIVTQAPSGSSVRRGDRIVSLQGASNADWLARLTRNISADTPALAYSQMQGMELYYIWLEYGPLSRFTLELEDAVGVRRQVELDALPMAALSDREGLERIDLSGRDARMLTGDIAYLRPGPFYNTAAQTAQEAYDPEALAAYTAFIDAAFEDFIDQGAQALILDVRDNPGGDNSWSDPVISWFADRPFRFASEFRIRVSDLSTASNQARLDAAPAGPSSTSQMLADLYDSAPNGETVSFEVPY 825 HTRIEG NPGF++Y+SD+ A +FP+SFEVRDGEVI+TQAP+ GDRI+SL+GA+N+DWLARLTRN+ A+T AY+QM+G E Y++WLEYG RFTLE+E G RR +EL A+ AL DREGL R+DL+GR+ARMLT +IAYLRPGPFY+ AQ+A+ AY PEA+A ++ F+DA+FE F+ GA+ALILD+R+NPGG N++SD V+SW ADRPFRFAS+FRIR+S+ S ASNQAR+DA G S T LADLYD P GETVSFE+ Y Sbjct: 93 HTRIEGLNPGFLEYLSDDDARLFPVSFEVRDGEVIITQAPANFPACPGDRIISLEGAANSDWLARLTRNVPAETAPFAYAQMEGSEAYFVWLEYGARERFTLEIESQDGARRTLELPAISYDALMDREGLSRLDLNGREARMLTDEIAYLRPGPFYDLEAQSAETAYLPEAVARFSDFVDASFETFLASGAEALILDLRNNPGGSNAFSDLVLSWIADRPFRFASDFRIRISEQSIASNQARIDAGDTGLSRT---LADLYDGVPVGETVSFEIDY 365
BLAST of mRNA_C-australica_Contig_10269.1.1 vs. uniprot
Match: A0A3D5ZYA1_9PROT (TSPc domain-containing protein (Fragment) n=1 Tax=Oceanicaulis sp. TaxID=1924941 RepID=A0A3D5ZYA1_9PROT) HSP 1 Score: 316 bits (810), Expect = 1.180e-104 Identity = 158/215 (73.49%), Postives = 187/215 (86.98%), Query Frame = 1 Query: 184 LARLTRNISADTPALAYSQMQGMELYYIWLEYGPLSRFTLELEDAVGVRRQVELDALPMAALSDREGLERIDLSGRDARMLTGDIAYLRPGPFYNTAAQTAQEAYDPEALAAYTAFIDAAFEDFIDQGAQALILDVRDNPGGDNSWSDPVISWFADRPFRFASEFRIRVSDLSTASNQARLDAAPAGPSSTSQMLADLYDSAPNGETVSFEVPYA 828 LARLTRNISADT ALAYSQ+QGMELYYIWLEYGP +RFT++LE A G R+VE+DA+P++ALS+REG +R+DLSGR+ARML G+IAYLRPGPFYN A+T EAY P+ALAA+TAFID +F FI+ GAQALILD+R NPGGDNSWSDPV+SWFADRPFRFAS+FRIRVSD STASNQAR+DAAP G S TS +LA+LY +A NG+ V+ E+P A Sbjct: 1 LARLTRNISADTAALAYSQLQGMELYYIWLEYGPQTRFTVDLEGADGQARRVEIDAVPLSALSEREGADRLDLSGREARMLNGEIAYLRPGPFYNINARTEAEAYAPDALAAHTAFIDESFRTFIENGAQALILDLRQNPGGDNSWSDPVVSWFADRPFRFASQFRIRVSDYSTASNQARIDAAPDGASGTSGILAELYATAANGDIVTLELPCA 215
BLAST of mRNA_C-australica_Contig_10269.1.1 vs. uniprot
Match: UPI00193A67D3 (S41 family peptidase n=1 Tax=Maricaulis parjimensis TaxID=144023 RepID=UPI00193A67D3) HSP 1 Score: 300 bits (768), Expect = 3.170e-96 Identity = 159/277 (57.40%), Postives = 200/277 (72.20%), Query Frame = 1 Query: 1 HTRIEGFNPGFVDYMSDEALVFPLSFEVRDGEVIVTQAPSGSSVRRGDRIVSLQGASNADWLARLTRNISADTPALAYSQMQGMELYYIWLEYGPLSRFTLELEDAVGVRRQVELDALPMAALSDREGLE-RIDLSGRDARMLTGDIAYLRPGPFYNTAAQTAQEAYDPEALAAYTAFIDAAFEDFIDQGAQALILDVRDNPGGDNSWSDPVISWFADRPFRFASEFRIRVSDLSTASNQARLDAAPAGPSSTSQMLADLYDSAPNGETVSFEVPYA 828 HTRIEG NP + D+ + L+FPL F V +GEVI+T AP+GS V GDRI++L+G N WLARLTRNISA+TP AY+Q+ E YY+ LEYG +FT+ + D GV R + LDA+P++ L + EG R +L GR+A MLT IAY+RPGPF++ A+ Y P+ LA Y ++D AFEDFI GA LILD+RDNPGGDNSWSDPVI+WFADRPFRFA++F+IRVS+ STASNQARLDA A +S+S LA LY A NG VSF+ P+A Sbjct: 98 HTRIEGLNPIWADHAGADGLLFPLRFIVENGEVIITAAPAGSDVSPGDRILALEGEPNPIWLARLTRNISAETPEFAYAQLANGEFYYMLLEYGAREQFTVTV-DQDGVSRSLTLDAIPLSRLGELEGTSPRFNLEGREAGMLTQRIAYIRPGPFWDIEAEDPALHYAPDGLARYQDWLDTAFEDFIAAGATDLILDLRDNPGGDNSWSDPVIAWFADRPFRFAADFQIRVSEQSTASNQARLDATGADEASSSARLAALYADASNGTLVSFDFPHA 373
BLAST of mRNA_C-australica_Contig_10269.1.1 vs. uniprot
Match: A0A4S2HF30_9PROT (TSPc domain-containing protein n=2 Tax=Marinicauda pacifica TaxID=1133559 RepID=A0A4S2HF30_9PROT) HSP 1 Score: 299 bits (766), Expect = 1.560e-95 Identity = 158/277 (57.04%), Postives = 202/277 (72.92%), Query Frame = 1 Query: 1 HTRIEGFNPGFVDYMSDEALVFPLSFEVRDGEVIVTQAPSGSSVRRGDRIVSLQGASNADWLARLTRNISADTPALAYSQMQGMELYYIWLEYGPLSRFTLELEDAVGVRRQVELDALPMAALSDREGLER-IDLSGRDARMLTGDIAYLRPGPFYNTAAQTAQEAYDPEALAAYTAFIDAAFEDFIDQGAQALILDVRDNPGGDNSWSDPVISWFADRPFRFASEFRIRVSDLSTASNQARLDAAPAGPSSTSQMLADLYDSAPNGETVSFEVPYA 828 HTRI +P + D++ + FPLS V +GEVIVT+AP+ S V+ GDRI+S+ G N WLARLTRNI+ADTPALAYSQ++G ELYY WLEYG F + E G R + + A + L + G+E L+GR+ARM+ IAYLRPG FYN A T +EAYDPEA A+ A+IDAA+ DFI+ GA+ALILD+RDNPGGDNS+SDPV++WFAD PFRFAS+F+I+VS+ + ASNQAR+DA G +S S LA+LY +A GETVS+E+PYA Sbjct: 129 HTRIVSPHPDWNDHL-ETGRFFPLSLRVHEGEVIVTEAPADSPVQPGDRILSIDGQVNPVWLARLTRNIAADTPALAYSQLEGSELYYFWLEYGEPDSFDIAYERQ-GERARARIAAASLDELRNSVGIENAFSLAGREARMVDQTIAYLRPGAFYNVDATTPEEAYDPEATRAFIAYIDAAYRDFIEAGAEALILDLRDNPGGDNSYSDPVVAWFADEPFRFASDFQIKVSESTIASNQARVDALTEGETSASSRLAELYAAAEPGETVSYEIPYA 403
BLAST of mRNA_C-australica_Contig_10269.1.1 vs. uniprot
Match: UPI000DBFA326 (S41 family peptidase n=1 Tax=Hyphomonas sp. GM-8P TaxID=1280945 RepID=UPI000DBFA326) HSP 1 Score: 282 bits (721), Expect = 6.750e-89 Identity = 149/275 (54.18%), Postives = 193/275 (70.18%), Query Frame = 1 Query: 1 HTRIEGFNPGFVDYMSDEALVFPLSFEVRDGEVIVTQAPSGSSVRRGDRIVSLQGASNADWLARLTRNISADTPALAYSQMQGMELYYIWLEYGPLSRFTLELEDAVGVRRQVELDALPMAALSDR-EGLERIDLSGRDARMLTGDIAYLRPGPFYNTAAQTAQEAYDPEALAAYTAFIDAAFEDFIDQGAQALILDVRDNPGGDNSWSDPVISWFADRPFRFASEFRIRVSDLSTASNQARLDAAPAGPSSTSQMLADLYDSAPNGETVSFEVP 822 HTRI+ NPG+ D++S L+FPL+F V +GEVIV+ AP GS V GDRI+S+ G N WL+R+ +SA+TP AY+QM G E Y++WL YG ++F++ +E V LDA+P+ A SD + L GRDARML +AYLRPGP +N A T +++Y PEALA YTAFIDAAFEDFI +GA L+LD+RDNPGGDNS++DPVI+WFAD+PFRFAS+F IRVS + ASNQ+RLDA + S LA+LY + G VSF+VP Sbjct: 117 HTRIDSLNPGWTDHVSAGGLIFPLTFLVENGEVIVSGAPEGSGVEPGDRILSIDGEPNPIWLSRVKAFVSAETPEFAYAQMVGGEPYFMWLAYGSKNQFSVGIERGSASSTMV-LDAIPIEAFSDLVTHVPGFSLEGRDARMLNDSVAYLRPGPSFNLDAATPEDSYAPEALAIYTAFIDAAFEDFIARGADHLVLDLRDNPGGDNSYTDPVIAWFADKPFRFASDFLIRVSPETIASNQSRLDAQQGDADNLSAKLAELYVDSEPGSLVSFDVP 390
BLAST of mRNA_C-australica_Contig_10269.1.1 vs. uniprot
Match: UPI0014870AD4 (S41 family peptidase n=1 Tax=Maricaulis alexandrii TaxID=2570354 RepID=UPI0014870AD4) HSP 1 Score: 275 bits (704), Expect = 1.390e-86 Identity = 148/275 (53.82%), Postives = 193/275 (70.18%), Query Frame = 1 Query: 1 HTRIEGFNPGFVDYMSDEALVFPLSFEVRDGEVIVTQAPSGSSVRRGDRIVSLQGASNADWLARLTRNISADTPALAYSQMQGMELYYIWLEYGPLSRFTLELEDAVGVRRQVELDALPMAALSDREGL-ERIDLSGRDARMLTGDIAYLRPGPFYNTAAQTAQEAYDPEALAAYTAFIDAAFEDFIDQGAQALILDVRDNPGGDNSWSDPVISWFADRPFRFASEFRIRVSDLSTASNQARLDAAPAGPSSTSQMLADLYDSAPNGETVSFEVP 822 HTRIEG NP + ++ + + +FPL+F V GEVIVT AP+ + VR GDRI+SL+G N WL+RLTRNISADTP AY+Q+ E YY+ +EYG F LE+ VR V + A+P++ + +R G L GR+ARMLT IAYLRPGPFY+ A Y P+A+AA+ A++D A+ FI GA L+LD+RDNPGGD S+SDPVI+WFADRPFRFAS+FRIRVS+ + ASNQARLDA G +S S LA LY+ A G+TV++++P Sbjct: 98 HTRIEGLNPVWPEHAATDGPLFPLAFIVEHGEVIVTDAPADAPVRPGDRILSLEGEPNPIWLSRLTRNISADTPDFAYAQLSNGEFYYVLVEYGVRESFDLEISRDGDVRA-VTVQAIPLSRMGERIGTGPGFRLDGREARMLTDRIAYLRPGPFYDFEASDPARQYAPDAIAAFQAWLDNAYAGFIAAGATDLVLDLRDNPGGDYSFSDPVIAWFADRPFRFASDFRIRVSEQAIASNQARLDATGGGDTSGSARLAALYEGARIGDTVTYDIP 371
BLAST of mRNA_C-australica_Contig_10269.1.1 vs. uniprot
Match: A0A2D7Y437_9PROT (TSPc domain-containing protein n=1 Tax=Maricaulis sp. TaxID=1486257 RepID=A0A2D7Y437_9PROT) HSP 1 Score: 275 bits (702), Expect = 3.350e-86 Identity = 147/275 (53.45%), Postives = 192/275 (69.82%), Query Frame = 1 Query: 1 HTRIEGFNPGFVDYMSDEALVFPLSFEVRDGEVIVTQAPSGSSVRRGDRIVSLQGASNADWLARLTRNISADTPALAYSQMQGMELYYIWLEYGPLSRFTLELEDAVGVRRQVELDALPMAALSDREGL-ERIDLSGRDARMLTGDIAYLRPGPFYNTAAQTAQEAYDPEALAAYTAFIDAAFEDFIDQGAQALILDVRDNPGGDNSWSDPVISWFADRPFRFASEFRIRVSDLSTASNQARLDAAPAGPSSTSQMLADLYDSAPNGETVSFEVP 822 HTRIEG NP + + ++ ++ +FPL+F V GEVIVT AP+ + VR GDRI+SL+G N WL+RLTRNISADTP AY+Q+ E YY+ +EYG F LE+ G V + A+P++ + +R G L GR+ARMLT IAYLRPGPFY+ A Y PEA+AA+ A++D A+ FI GA L+LD+RDNPGGD S+SDPVI+WFADRPFRFAS+FRIRVS+ + ASNQARLDA G +S S LA LY+ G+TV++++P Sbjct: 105 HTRIEGLNPVWAEQVAADSPLFPLAFIVEHGEVIVTDAPADADVRPGDRILSLEGEPNPIWLSRLTRNISADTPDFAYAQLSNGEFYYVLVEYGVRESFDLEISRD-GEVHAVTVQAIPLSRMGERIGTGPGFRLDGREARMLTDRIAYLRPGPFYDFQASDPARQYAPEAVAAFQAWLDTAYAGFIAAGATDLVLDLRDNPGGDYSFSDPVIAWFADRPFRFASDFRIRVSEQAMASNQARLDATGGGDTSGSARLAALYEGVRIGDTVTYDIP 378
BLAST of mRNA_C-australica_Contig_10269.1.1 vs. uniprot
Match: A0A2E1LQQ2_9PROT (TSPc domain-containing protein n=2 Tax=Hyphomonadaceae TaxID=69657 RepID=A0A2E1LQQ2_9PROT) HSP 1 Score: 264 bits (675), Expect = 4.670e-83 Identity = 140/276 (50.72%), Postives = 183/276 (66.30%), Query Frame = 1 Query: 1 HTRIEGFNPGFVDYMSDEALVFPLSFEVRDGEVIVTQAPSGSSVRRGDRIVSLQGASNADWLARLTRNISADTPALAYSQMQGMELYYIWLEYGPLSRFTLELEDAVGVRRQVELDALPMAALSDREGLER-IDLSGRDARMLTGDIAYLRPGPFYNTAAQTAQEAYDPEALAAYTAFIDAAFEDFIDQGAQALILDVRDNPGGDNSWSDPVISWFADRPFRFASEFRIRVSDLSTASNQARLDAAPAGPSSTSQMLADLYDSAPNGETVSFEVPY 825 HTR+EG +P + DYM E VFPLSF + GEVIV AP S + GDRI SL SN WL +T+ ISA+TP LAYS M E YY WL +G F + + + GV ++EL A+ + L + LE + GR+A+++ G+I YLRPGPFY+ A+T ++ Y+ +ALA Y FID F F ++G L+LD+RDNPGGD S+SDPVI WFA PFRFAS+FRIRVS+ +T SNQARLDA + SQ+ ADL+ +A NGE VSF++PY Sbjct: 28 HTRLEGISPDWHDYMEREGKVFPLSFSIFQGEVIVAGAPPESGIFPGDRITSLDRKSNPIWLMEITKYISAETPQLAYSLMNQGEYYYFWLAFGERESFDITIMRS-GVEIELELKAISIDELDNNIELESGFQIPGREAKLIEGNIGYLRPGPFYHFEAETPEDVYNAQALAEYKKFIDDTFASFQNEGVSHLVLDLRDNPGGDASFSDPVIQWFATEPFRFASDFRIRVSNETTTSNQARLDARDSAAGGVSQLFADLFATAENGEYVSFDIPY 302
BLAST of mRNA_C-australica_Contig_10269.1.1 vs. uniprot
Match: A0A399RQ49_9PROT (TSPc domain-containing protein n=1 Tax=Henriciella mobilis TaxID=2305467 RepID=A0A399RQ49_9PROT) HSP 1 Score: 264 bits (674), Expect = 4.480e-82 Identity = 145/280 (51.79%), Postives = 184/280 (65.71%), Query Frame = 1 Query: 1 HTRIEGFNPGFVDYMSDEALVFPLSFEVRDGEVIVTQAPSGSSVRRGDRIVSLQGASNADWLARLTRNISADTPALAYSQMQGMELYYIWLEYGPLSRFTLELEDAVGVRRQVELDALPMAALSDREGL----ERIDLSGRDARMLTGDIAYLRPGPFYNTAAQTAQEAYDPEALAAYTAFIDAAFEDFIDQGAQALILDVRDNPGGDNSWSDPVISWFADRPFRFASEFRIRVSDLSTASNQARLDAAPAGPSSTSQMLADLYDSAPNGETVSFEVPYA 828 H RI NPGF ++ VFPL V DGEV+V APSGS V+ GDR+ +L+G N WLA L I A+TPALAYS M G E YY+WL YGP F + +E + + ALP + + + L + DL+GR+AR+L+ + YLRPGPF++ A EAY +A+AA+TAF+D AF FI G L+LD+RDNPGGDNS+SDP+++WFAD PFRFAS+FRIRVS + ASNQARL+ A G STS LA LY SA GE VS+E+PYA Sbjct: 101 HARINSLNPGFRAHIEAGGKVFPLKLSVVDGEVVVAGAPSGSDVKPGDRLRALEGEPNPIWLAGLLAFIPAETPALAYSMMSGGEPYYMWLAYGPKDTFNVTVERS----EETITAALPAIPIDEIDTLVTQEKGFDLAGREARLLSETVGYLRPGPFFDVDATEPGEAYSKDAVAAFTAFVDDAFTGFIQAGVSDLVLDLRDNPGGDNSFSDPIVAWFADEPFRFASDFRIRVSAEAIASNQARLETA--GEDSTSARLAALYASAAPGEVVSYELPYA 374 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10269.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10269.1.1 >prot_C-australica_Contig_10269.1.1 ID=prot_C-australica_Contig_10269.1.1|Name=mRNA_C-australica_Contig_10269.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=276bp HTRIEGFNPGFVDYMSDEALVFPLSFEVRDGEVIVTQAPSGSSVRRGDRIback to top mRNA from alignment at C-australica_Contig_10269:2..829+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10269.1.1 ID=mRNA_C-australica_Contig_10269.1.1|Name=mRNA_C-australica_Contig_10269.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=828bp|location=Sequence derived from alignment at C-australica_Contig_10269:2..829+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10269:2..829+ >mRNA_C-australica_Contig_10269.1.1 ID=mRNA_C-australica_Contig_10269.1.1|Name=mRNA_C-australica_Contig_10269.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=828bp|location=Sequence derived from alignment at C-australica_Contig_10269:2..829+ (Chrysoparadoxa australica CS_1217)back to top |