mRNA_C-australica_Contig_10266.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: W4L759_9BACT (Uncharacterized protein n=1 Tax=Candidatus Entotheonella factor TaxID=1429438 RepID=W4L759_9BACT) HSP 1 Score: 122 bits (306), Expect = 3.390e-34 Identity = 54/83 (65.06%), Postives = 70/83 (84.34%), Query Frame = 1 Query: 19 SVKEGTTNGAALDYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267 +V GT+ A+ D++A+V+GAG++GL+++Y+LRE+G+ V GFEAGT VGGTWYWNRYPGAR DS+S Y Y FSQELLDEWDW Sbjct: 6 AVPNGTSTEASPDFDAIVIGAGVSGLYQLYRLRELGLKVRGFEAGTGVGGTWYWNRYPGARFDSESWTYGYSFSQELLDEWDW 88
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: A0A661GR88_9GAMM (Cyclohexanone monooxygenase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661GR88_9GAMM) HSP 1 Score: 121 bits (304), Expect = 5.070e-34 Identity = 55/71 (77.46%), Postives = 61/71 (85.92%), Query Frame = 1 Query: 55 DYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267 DY+AVVVGAGIAGL+ +YKLREMG+ V G EA VGGTWYWN YPGARVDSQS+IYQYWFS EL+ EWDW Sbjct: 8 DYDAVVVGAGIAGLYAMYKLREMGLRVRGIEAAPAVGGTWYWNCYPGARVDSQSYIYQYWFSDELIQEWDW 78
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: A0A383EZP6_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A383EZP6_9ZZZZ) HSP 1 Score: 121 bits (303), Expect = 2.200e-33 Identity = 55/72 (76.39%), Postives = 64/72 (88.89%), Query Frame = 1 Query: 52 LDYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267 LDY+A+VVGAGIAGL+++YKLRE+G+ V FEAGT VGGTWYWNRYPGAR DS+S+ Y Y FSQELLDEWDW Sbjct: 17 LDYDAIVVGAGIAGLYQLYKLREIGMKVRLFEAGTGVGGTWYWNRYPGARFDSESYSYAYSFSQELLDEWDW 88
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: A0A381WEN5_9ZZZZ (Uncharacterized protein (Fragment) n=2 Tax=marine metagenome TaxID=408172 RepID=A0A381WEN5_9ZZZZ) HSP 1 Score: 117 bits (293), Expect = 1.420e-32 Identity = 52/72 (72.22%), Postives = 63/72 (87.50%), Query Frame = 1 Query: 52 LDYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267 LDY+A+V+GAGI+GL+++YKLR +G+ V FEAGT VGGTWYWNRYPGAR DS+S+ Y Y FSQELLDEWDW Sbjct: 17 LDYDAIVIGAGISGLYQLYKLRTIGMRVRVFEAGTGVGGTWYWNRYPGARFDSESYSYAYSFSQELLDEWDW 88
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: A0A382V5G4_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382V5G4_9ZZZZ) HSP 1 Score: 119 bits (297), Expect = 3.080e-32 Identity = 55/88 (62.50%), Postives = 70/88 (79.55%), Query Frame = 1 Query: 4 GEAVQSVKEGTTNGAALDYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267 GE+VQ +K LDY+ +V+GAGI+GL+++YKLRE+G++V FE GT VGGTWYWNRYPGAR DS+S+ Y Y FSQELLDEW+W Sbjct: 9 GESVQDIK--------LDYDVIVIGAGISGLYQLYKLRELGLNVRVFETGTGVGGTWYWNRYPGARFDSESYSYAYSFSQELLDEWNW 88
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: A0A352Q7K3_9GAMM (Cyclohexanone monooxygenase n=2 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A352Q7K3_9GAMM) HSP 1 Score: 124 bits (312), Expect = 1.410e-31 Identity = 58/78 (74.36%), Postives = 65/78 (83.33%), Query Frame = 1 Query: 34 TTNGAALDYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267 T N LD++AVVVGAGIAGL+ VYKLREMG+SV G +A VGGTWYWN YPGARVDSQS+IYQYWFS EL+ EWDW Sbjct: 7 TENTTKLDFDAVVVGAGIAGLYAVYKLREMGLSVRGIDAAPAVGGTWYWNCYPGARVDSQSYIYQYWFSDELIKEWDW 84
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: A0A661GUI4_9GAMM (Cyclohexanone monooxygenase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661GUI4_9GAMM) HSP 1 Score: 121 bits (304), Expect = 1.790e-30 Identity = 55/71 (77.46%), Postives = 61/71 (85.92%), Query Frame = 1 Query: 55 DYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267 DY+AVVVGAGIAGL+ +YKLREMG+ V G EA VGGTWYWN YPGARVDSQS+IYQYWFS EL+ EWDW Sbjct: 7 DYDAVVVGAGIAGLYAMYKLREMGLRVRGIEAAPAVGGTWYWNCYPGARVDSQSYIYQYWFSDELIQEWDW 77
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: A0A2A5BSS1_9GAMM (Cyclohexanone monooxygenase n=1 Tax=Cellvibrionales bacterium TaxID=2026722 RepID=A0A2A5BSS1_9GAMM) HSP 1 Score: 121 bits (304), Expect = 1.860e-30 Identity = 54/71 (76.06%), Postives = 61/71 (85.92%), Query Frame = 1 Query: 55 DYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267 DY+A+VVGAG+AGL+ VYKLREMG+ V G EA VGGTWYWN YPGARVDSQS+IYQYWFS EL+ EWDW Sbjct: 13 DYDAIVVGAGLAGLYAVYKLREMGLRVHGIEAAPAVGGTWYWNCYPGARVDSQSYIYQYWFSDELIQEWDW 83
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: A0A5N9GP00_9CHLR (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=SAR202 cluster bacterium TaxID=2030829 RepID=A0A5N9GP00_9CHLR) HSP 1 Score: 121 bits (304), Expect = 1.920e-30 Identity = 57/88 (64.77%), Postives = 70/88 (79.55%), Query Frame = 1 Query: 4 GEAVQSVKEGTTNGAALDYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267 G+ VQ +K DY+A+V+GAGIAGL+++YKLRE+G++V FEAGT VGGTWYWNRYPGAR DS+S+ Y Y FSQELLDEWDW Sbjct: 9 GQTVQDIKT--------DYDAIVIGAGIAGLYQLYKLRELGLNVRVFEAGTGVGGTWYWNRYPGARFDSESYSYAYSFSQELLDEWDW 88
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: A0A1Y5FR78_9GAMM (Cyclohexanone monooxygenase n=1 Tax=Gammaproteobacteria bacterium 54_18_T64 TaxID=1856296 RepID=A0A1Y5FR78_9GAMM) HSP 1 Score: 121 bits (303), Expect = 2.590e-30 Identity = 54/78 (69.23%), Postives = 64/78 (82.05%), Query Frame = 1 Query: 34 TTNGAALDYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267 TT G +Y+A+VVGAGIAGL+ +Y+LREMG+ V G EA VGGTWYWN YPGARVDSQS+IYQYWFS EL+ EW+W Sbjct: 7 TTQGVEQEYDAIVVGAGIAGLYAIYRLREMGLRVRGIEAAPAVGGTWYWNCYPGARVDSQSYIYQYWFSDELIQEWNW 84 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10266.1.1 >prot_C-australica_Contig_10266.1.1 ID=prot_C-australica_Contig_10266.1.1|Name=mRNA_C-australica_Contig_10266.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=89bp MGEAVQSVKEGTTNGAALDYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAback to top mRNA from alignment at C-australica_Contig_10266:6..272- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10266.1.1 ID=mRNA_C-australica_Contig_10266.1.1|Name=mRNA_C-australica_Contig_10266.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=267bp|location=Sequence derived from alignment at C-australica_Contig_10266:6..272- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10266:6..272- >mRNA_C-australica_Contig_10266.1.1 ID=mRNA_C-australica_Contig_10266.1.1|Name=mRNA_C-australica_Contig_10266.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=267bp|location=Sequence derived from alignment at C-australica_Contig_10266:6..272- (Chrysoparadoxa australica CS_1217)back to top |