mRNA_C-australica_Contig_10262.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10262.1.1 vs. uniprot
Match: A0A2E8MUF1_9RICK (IS91 family transposase n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E8MUF1_9RICK) HSP 1 Score: 322 bits (824), Expect = 2.030e-107 Identity = 142/196 (72.45%), Postives = 170/196 (86.73%), Query Frame = 1 Query: 1 ATIFREYGSQFLSEHKLCNVQRKAFKAIIECRTAALGGHVEKCDQCSHQRISYNSCRNRSCNKCQYTKQLIWVDKLRSTLPVCPYFHMVFTIPQQLHKLFYLNQRICYDLLFKAASQTLQKVARNPRFMGAETGCVAVLHTWGQALTYHPHIHMLIPAGGLSFDGTEWVKAGKKFFLPVKALSKVFRGVLWSLLQK 588 A IFR+YG FL+ H+LC Q KA+ AI CRTA +GGH++KC C+HQ++SYNSCRNR CNKCQYTKQLIWVDKL+STLPVC YFH+VFTIP QLHK FY+NQ+ CY LLFKA+++TLQKV NP F+GA+TG V++LHTWGQALTYHPH+HML+PAGGLS DGTEWV AGKKFFLPVKALS VFRGV+W++L++ Sbjct: 13 AAIFRQYGDTFLANHQLCYDQLKAYNAICNCRTAKMGGHLDKCSHCAHQQLSYNSCRNRHCNKCQYTKQLIWVDKLKSTLPVCRYFHLVFTIPAQLHKTFYINQQECYKLLFKASAETLQKVGANPSFLGAQTGAVSLLHTWGQALTYHPHVHMLVPAGGLSEDGTEWVHAGKKFFLPVKALSSVFRGVMWTMLEQ 208
BLAST of mRNA_C-australica_Contig_10262.1.1 vs. uniprot
Match: A0A5E8AQY4_9BACT (Transposase n=2 Tax=Imperialibacter TaxID=1649461 RepID=A0A5E8AQY4_9BACT) HSP 1 Score: 309 bits (792), Expect = 1.050e-102 Identity = 140/195 (71.79%), Postives = 162/195 (83.08%), Query Frame = 1 Query: 1 ATIFREYGSQFLSEHKLCNVQRKAFKAIIECRTAALGGHVEKCDQCSHQRISYNSCRNRSCNKCQYTKQLIWVDKLRSTLPVCPYFHMVFTIPQQLHKLFYLNQRICYDLLFKAASQTLQKVARNPRFMGAETGCVAVLHTWGQALTYHPHIHMLIPAGGLSFDGTEWVKAGKKFFLPVKALSKVFRGVLWSLLQ 585 A IFREYG F++ KL Q KA+ AI CRT+A+GGHV+ CD+C H ++SYNSCRNR CNKCQYTKQL+WVDKLRS LPVC YFH+VFTIP QL K FY+NQR CY LLF+A+++TL KV RNP+F+GAETG V+VLHTWGQALTYHPHIHML+PAGGLS DG EWV AGKKFFLPVK LS +FRGVLW L+ Sbjct: 2 AAIFREYGGNFIARGKLSIDQLKAYNAICSCRTSAMGGHVDSCDKCGHCQVSYNSCRNRHCNKCQYTKQLVWVDKLRSALPVCRYFHVVFTIPSQLQKTFYINQRECYKLLFQASAETLLKVGRNPKFLGAETGAVSVLHTWGQALTYHPHIHMLVPAGGLSEDGVEWVNAGKKFFLPVKVLSSIFRGVLWDKLK 196
BLAST of mRNA_C-australica_Contig_10262.1.1 vs. uniprot
Match: A0A2E9GDT6_9RHOB (IS91 family transposase n=1 Tax=Thalassobius sp. TaxID=1979401 RepID=A0A2E9GDT6_9RHOB) HSP 1 Score: 278 bits (711), Expect = 3.000e-90 Identity = 123/194 (63.40%), Postives = 151/194 (77.84%), Query Frame = 1 Query: 7 IFREYGSQFLSEHKLCNVQRKAFKAIIECRTAALGGHVEKCDQCSHQRISYNSCRNRSCNKCQYTKQLIWVDKLRSTLPVCPYFHMVFTIPQQLHKLFYLNQRICYDLLFKAASQTLQKVARNPRFMGAETGCVAVLHTWGQALTYHPHIHMLIPAGGLSFDGTEWVKAGKKFFLPVKALSKVFRGVLWSLLQK 588 IFR YG FLS H LC Q KA++ I +CRT A+GGHVE CD C++ R +YNSCRNR CNKCQY KQL WVDKL++ LPVC YFH+VFTIPQ LHKLFY+NQR+CYDLL K++ Q ++ V NPR++GA TG V+VLHTWGQ+LTYHPH+H+L+PAGG++ D EW K K + PVK LSKVFRG+ W + K Sbjct: 19 IFRRYGEDFLSSHMLCPDQLKAYRTIRDCRTVAMGGHVEGCDHCTYHRNAYNSCRNRHCNKCQYAKQLQWVDKLQANLPVCSYFHVVFTIPQSLHKLFYINQRVCYDLLMKSSWQAVKNVTANPRYLGARTGAVSVLHTWGQSLTYHPHVHLLVPAGGITDDEMEW-KDAKDYLAPVKVLSKVFRGIFWEWICK 211
BLAST of mRNA_C-australica_Contig_10262.1.1 vs. uniprot
Match: A0A661XUS2_9BACT (IS91 family transposase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A661XUS2_9BACT) HSP 1 Score: 271 bits (692), Expect = 2.380e-87 Identity = 119/190 (62.63%), Postives = 150/190 (78.95%), Query Frame = 1 Query: 1 ATIFREYGSQFLSEHKLCNVQRKAFKAIIECRTAALGGHVEKCDQCSHQRISYNSCRNRSCNKCQYTKQLIWVDKLRSTLPVCPYFHMVFTIPQQLHKLFYLNQRICYDLLFKAASQTLQKVARNPRFMGAETGCVAVLHTWGQALTYHPHIHMLIPAGGLSFDGTEWVKAGKKFFLPVKALSKVFRGVL 570 A I ++GS +L H+LC + KA+ AI+ CRTA +GGH+++CDQC+HQR +YNSCRNR C KCQY KQ+ WVDKL++ LP YFH+VFTIP H FY+N R+CYDL+FKAA+ TL+K NP F+GAETG VA+LHTWGQ LTYHPHIHM+ PAGGLS D +EW+ + K+FFLPVKALSK+FR +L Sbjct: 13 ADILDQHGSDYLETHRLCPDRLKAYHAILNCRTAFMGGHLQECDQCAHQRPAYNSCRNRHCPKCQYIKQVQWVDKLKALLPPTQYFHLVFTIPSASHLTFYINPRVCYDLMFKAAATTLKKAGANPDFLGAETGAVAILHTWGQTLTYHPHIHMIAPAGGLSADQSEWISSPKEFFLPVKALSKIFRAIL 202
BLAST of mRNA_C-australica_Contig_10262.1.1 vs. uniprot
Match: A0A661ZWX0_9BACT (IS91 family transposase (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A661ZWX0_9BACT) HSP 1 Score: 265 bits (677), Expect = 2.800e-85 Identity = 122/196 (62.24%), Postives = 149/196 (76.02%), Query Frame = 1 Query: 1 ATIFREYGSQFLSEHKLCNVQRKAFKAIIECRTAALGGHVEKCDQCSHQRISYNSCRNRSCNKCQYTKQLIWVDKLRSTLPVCPYFHMVFTIPQQLHKLFYLNQRICYDLLFKAASQTLQKVARNPRFMGAETGCVAVLHTWGQALTYHPHIHMLIPAGGLSFDGTEWVKAGKKFFLPVKALSKVFRGVLWSLLQK 588 A IFR++G + H L VQ KAF II CR+A LGGH++KCD C H + +YNSCRNR C KCQY KQ+ WVDKL++ LP +FH+VFTIPQ LHKLFYLNQ Y LLFKA++ L+ A NP+F+GA+TG VAVLHTWGQ L YHPHIHM++PAGGLS D EW+ +G+ FFLPVK LS +FRG+L SLL+K Sbjct: 11 ADIFRKFGDVYSDIHNLHPVQTKAFNDIINCRSAELGGHIKKCDHCGHTKHAYNSCRNRHCPKCQYIKQVQWVDKLKAKLPPTRHFHLVFTIPQSLHKLFYLNQAQAYKLLFKASAMALKTCAVNPKFLGAQTGAVAVLHTWGQTLNYHPHIHMIVPAGGLSEDDMEWIHSGRTFFLPVKVLSALFRGILCSLLEK 206
BLAST of mRNA_C-australica_Contig_10262.1.1 vs. uniprot
Match: A0A256WCZ5_9BACT (IS91 family transposase n=1 Tax=Bacteroidetes bacterium 4572_114 TaxID=1971631 RepID=A0A256WCZ5_9BACT) HSP 1 Score: 265 bits (677), Expect = 4.260e-85 Identity = 117/190 (61.58%), Postives = 148/190 (77.89%), Query Frame = 1 Query: 1 ATIFREYGSQFLSEHKLCNVQRKAFKAIIECRTAALGGHVEKCDQCSHQRISYNSCRNRSCNKCQYTKQLIWVDKLRSTLPVCPYFHMVFTIPQQLHKLFYLNQRICYDLLFKAASQTLQKVARNPRFMGAETGCVAVLHTWGQALTYHPHIHMLIPAGGLSFDGTEWVKAGKKFFLPVKALSKVFRGVL 570 A I ++ FLS H+LC Q KA+++II CRT+ LGGH + CD C H R +YNSCRNR C KCQ+ KQ+ WVDKL++ LP YFH+VFTIP LHK FY+NQ + Y L+FKAA + L+ A NP+F+GA+TG VAVLHTWGQALTYHPHIHM++P+GGLS DG EWV++G+KFFLPV+ LS +FRG+L Sbjct: 11 ADILLKHKDDFLSSHRLCPEQAKAYESIINCRTSGLGGHTDMCDHCGHTRQAYNSCRNRHCPKCQFVKQVQWVDKLKANLPPVRYFHLVFTIPSCLHKTFYINQAVAYSLMFKAAGEALKICAANPKFLGAQTGAVAVLHTWGQALTYHPHIHMIVPSGGLSQDGIEWVQSGEKFFLPVRVLSGLFRGIL 200
BLAST of mRNA_C-australica_Contig_10262.1.1 vs. uniprot
Match: A0A3D0F4M2_9BACT (IS91 family transposase n=1 Tax=Rikenellaceae bacterium TaxID=2049048 RepID=A0A3D0F4M2_9BACT) HSP 1 Score: 263 bits (673), Expect = 1.660e-84 Identity = 121/195 (62.05%), Postives = 145/195 (74.36%), Query Frame = 1 Query: 1 ATIFREYGSQFLSEHKLCNVQRKAFKAIIECRTAALGGHVEKCDQCSHQRISYNSCRNRSCNKCQYTKQLIWVDKLRSTLPVCPYFHMVFTIPQQLHKLFYLNQRICYDLLFKAASQTLQKVARNPRFMGAETGCVAVLHTWGQALTYHPHIHMLIPAGGLSFDGTEWVKAGKKFFLPVKALSKVFRGVLWSLLQ 585 A IF Y +FLS H LC+ Q KAF +II CRT+ LGGH++ CD C + R SYNSCRNR C KCQ+ K+ WVDKL S LP +FH+VFTIP LH+LFY+NQ I Y LLFKAA + L + A NP F+GA+ G VA+LHTWGQ L YHPHIHM++PAGGLS D EW +GKKFF+PVKALS VFRG+L LL+ Sbjct: 11 ADIFSSYAEEFLSSHSLCSEQIKAFNSIINCRTSTLGGHIDHCDYCGYTRQSYNSCRNRHCPKCQFVKKAQWVDKLASNLPPVRHFHVVFTIPPCLHRLFYINQNIAYGLLFKAAGKALMQCAANPGFLGAQAGAVAILHTWGQTLVYHPHIHMIVPAGGLSEDMMEWFVSGKKFFIPVKALSSVFRGILCRLLE 205
BLAST of mRNA_C-australica_Contig_10262.1.1 vs. uniprot
Match: UPI0009DA198D (IS91 family transposase n=1 Tax=Nafulsella turpanensis TaxID=1265690 RepID=UPI0009DA198D) HSP 1 Score: 263 bits (672), Expect = 2.730e-84 Identity = 115/193 (59.59%), Postives = 148/193 (76.68%), Query Frame = 1 Query: 7 IFREYGSQFLSEHKLCNVQRKAFKAIIECRTAALGGHVEKCDQCSHQRISYNSCRNRSCNKCQYTKQLIWVDKLRSTLPVCPYFHMVFTIPQQLHKLFYLNQRICYDLLFKAASQTLQKVARNPRFMGAETGCVAVLHTWGQALTYHPHIHMLIPAGGLSFDGTEWVKAGKKFFLPVKALSKVFRGVLWSLLQ 585 +F+++ + S + LC+ Q+KAF AI CRTAA+G H CD C H+ +SYNSCRNR C KCQY KQ++WVDKL+ L YFH+VFT+P+ +LFYLNQR CYDLLFKA+ + +QK A NP F+GAE GC++VLHTWGQ+L YHPHIH L+PAGGL DG EW++A KKFF+PVKALSK++RG+ LL+ Sbjct: 14 VFQQHAEAYQSRYSLCSSQQKAFDAIRGCRTAAMGSHSSSCDSCGHKNMSYNSCRNRHCPKCQYLKQVVWVDKLQGRLLPTRYFHIVFTVPEFFKRLFYLNQRKCYDLLFKASGRAIQKAAANPSFLGAEGGCLSVLHTWGQSLHYHPHIHCLVPAGGLDADGMEWIEAHKKFFVPVKALSKIYRGIFMKLLE 206
BLAST of mRNA_C-australica_Contig_10262.1.1 vs. uniprot
Match: A0A3G9EG12_9BACT (Transposase n=5 Tax=root TaxID=1 RepID=A0A3G9EG12_9BACT) HSP 1 Score: 262 bits (669), Expect = 6.890e-84 Identity = 122/196 (62.24%), Postives = 149/196 (76.02%), Query Frame = 1 Query: 1 ATIFREYGSQFLSEHKLCNVQRKAFKAIIECRTAALGGHVEKCDQCSHQRISYNSCRNRSCNKCQYTKQLIWVDKLRSTLPVCPYFHMVFTIPQQLHKLFYLNQRICYDLLFKAASQTLQKVARNPRFMGAETGCVAVLHTWGQALTYHPHIHMLIPAGGLSFDGTEWVKAGKKFFLPVKALSKVFRGVLWSLLQK 588 A IFR+ FL+E+ LC VQ+KA + II CRT+ LGGH C+ C H+ SYNSCRNR+C KCQY K++ WVDKL + LP +FH+VFTIP LHKLFY+NQRI Y LLFKAA QTL + ARN ++GAE G VA+LHTWGQ +TYHPHIH ++PAGG+S DG EWV + KKFF+PVK LS VFRG+L LLQ+ Sbjct: 11 ADIFRDKRHDFLTENTLCAVQQKAMEDIIACRTSELGGHTLSCNHCGHKVQSYNSCRNRNCPKCQYIKRMQWVDKLAADLPPVKHFHIVFTIPACLHKLFYINQRIAYSLLFKAAGQTLMQCARNTHYLGAEAGAVALLHTWGQTMTYHPHIHTIVPAGGVSDDGMEWVPSAKKFFVPVKVLSTVFRGILCRLLQE 206
BLAST of mRNA_C-australica_Contig_10262.1.1 vs. uniprot
Match: U5BYM2_9BACT (Zn_Tnp_IS91 domain-containing protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 TaxID=1123057 RepID=U5BYM2_9BACT) HSP 1 Score: 258 bits (660), Expect = 1.770e-82 Identity = 113/186 (60.75%), Postives = 147/186 (79.03%), Query Frame = 1 Query: 31 FLSEHKLCNVQRKAFKAIIECRTAALGGHVEKCDQCSHQRISYNSCRNRSCNKCQYTKQLIWVDKLRSTLPVCPYFHMVFTIPQQLHKLFYLNQRICYDLLFKAASQTLQKVARNPRFMGAETGCVAVLHTWGQALTYHPHIHMLIPAGGLSFDGTEWVKAGKKFFLPVKALSKVFRGVLWSLLQK 588 F S +KLC Q KA++AII CRT+ +G H CD C H++ YNSCRNR C KCQY KQ++WV+KL++ L YFH+VFT+P+ L+ +FY+NQR CYD+LF +++QT++K A NP F+GAETGC++VLHTWGQ+L YHPHIHML+PAGGL DG EWVKA +KFF+PVKA+SK+FRGV L+K Sbjct: 24 FFSHNKLCVDQIKAYEAIIGCRTSKMGSHTLVCDNCEHKKTCYNSCRNRHCPKCQYVKQVVWVEKLKARLLPVRYFHIVFTVPEFLNSIFYINQRECYDMLFSSSAQTMKKAAANPEFLGAETGCLSVLHTWGQSLNYHPHIHMLVPAGGLDPDGMEWVKANRKFFVPVKAISKIFRGVFMDRLRK 209 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10262.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10262.1.1 >prot_C-australica_Contig_10262.1.1 ID=prot_C-australica_Contig_10262.1.1|Name=mRNA_C-australica_Contig_10262.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=196bp ATIFREYGSQFLSEHKLCNVQRKAFKAIIECRTAALGGHVEKCDQCSHQRback to top mRNA from alignment at C-australica_Contig_10262:19..606- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10262.1.1 ID=mRNA_C-australica_Contig_10262.1.1|Name=mRNA_C-australica_Contig_10262.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=588bp|location=Sequence derived from alignment at C-australica_Contig_10262:19..606- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10262:19..606- >mRNA_C-australica_Contig_10262.1.1 ID=mRNA_C-australica_Contig_10262.1.1|Name=mRNA_C-australica_Contig_10262.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=588bp|location=Sequence derived from alignment at C-australica_Contig_10262:19..606- (Chrysoparadoxa australica CS_1217)back to top |