mRNA_C-australica_Contig_1026.5.6 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_1026.5.6 vs. uniprot
Match: A0A6H5L444_9PHAE (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L444_9PHAE) HSP 1 Score: 480 bits (1235), Expect = 3.400e-156 Identity = 244/392 (62.24%), Postives = 292/392 (74.49%), Query Frame = 2 Query: 152 EEVGYWQMAKQGYQELVHAIIRPPRAQYSISDLGPTSFAFMGKKFKRTDFQLLNPRGNRLMCSHWEPDGWSNAEQVPCLVYLHGNSSARVEALGQLSLCLSLGISMMAFDCSAGSGKSDGEWVSLGYYERDDLDSVVNYLRGTHSVSTIALWGRSMGAATSLLHGDRDPSIAAMVLDSAFTDLTHLAEEMVEKGREQGLNVPGIVVKIALRMIRGTVQKTAGFNIKDLSPISHADRTFIPAMFVAGKGDDFIGPHHSEMIHGAYAGDKNIVLVDGDHNSPRPRFLYDSVYIFLQNYLQVPFEWALDGGSRYIGLPPWSQAETGAGTR---------------------HQEVTLEEYMAMDQQID----VGMNMERQSEFQQALFQVFAQQK 1252 +E+ ++QMAK GYQELV+AIIRPPRA+Y + LGP F F+GK FKR DF+LLN RG+ L CSHW+P GW AE++PC+VY+HGNSSARVEAL QLSL LSLG ++++FD AGSGKS GE VSLGYYERDDL +V+ +LR + VSTIALWGRSMGAAT+LLHGDRDPSIAA+VLDSAF DLT LAEEMVE+GR+ GL VPGIVVK+ +RMIRGTV KTA FN++DL PI HA+RTFIPA+FVAG DDFI PHHS+ I AYAGDKN + VDGDHNSPRP FL+DSV+IFLQ YLQVP EW LD + +GLPPW A G+G + + +E D +D VGM RQ+EFQ ALF + AQ++ Sbjct: 84 QEMSWYQMAKAGYQELVNAIIRPPRARYEVEALGPVEFEFVGKAFKRLDFRLLNDRGHVLECSHWQPSGWRRAERLPCVVYMHGNSSARVEALPQLSLALSLGATLVSFDF-AGSGKSGGEHVSLGYYERDDLKAVIEHLRKSGQVSTIALWGRSMGAATALLHGDRDPSIAALVLDSAFADLTQLAEEMVERGRQAGLTVPGIVVKMVMRMIRGTVAKTANFNVRDLCPIKHANRTFIPALFVAGLSDDFIKPHHSKQICEAYAGDKNFITVDGDHNSPRPGFLFDSVFIFLQRYLQVPPEWGLDRENTVMGLPPWHYASGGSGMSAAXXXXXFGAAASGEGSGDLDYADYDWDEIGPEDIGVDGAPSVGMTRARQAEFQTALFHMLAQER 474
BLAST of mRNA_C-australica_Contig_1026.5.6 vs. uniprot
Match: D7FM32_ECTSI (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM32_ECTSI) HSP 1 Score: 466 bits (1198), Expect = 7.050e-152 Identity = 237/383 (61.88%), Postives = 280/383 (73.11%), Query Frame = 2 Query: 185 GYQELVHAIIRPPRAQYSISDLGPTSFAFMGKKFKRTDFQLLNPRGNRLMCSHWEPDGWSNAEQVPCLVYLHGNSSARVEALGQLSLCLSLGISMMAFDCSAGSGKSDGEWVSLGYYERDDLDSVVNYLRGTHSVSTIALWGRSMGAATSLLHGDRDPSIAAMVLDSAFTDLTHLAEEMVEKGREQGLNVPGIVVKIALRMIRGTVQKTAGFNIKDLSPISHADRTFIPAMFVAGKGDDFIGPHHSEMIHGAYAGDKNIVLVDGDHNSPRPRFLYDSVYIFLQNYLQVPFEWALDGGSRYIGLPPWSQAETGAGTRHQEVTLEEY---------------------------MAMDQQIDVGMNMERQSEFQQALFQVFAQQK 1252 GYQELV+AIIRPPRA+Y + LGP F F+GK FKR DF+LLN RG+ L CSHW+P+GW AE++PC+VY+HGNSSARVEAL QLSL LSLG ++++FD AGSG+S GE VSLGYYERDDL +V+ +LR + VSTIALWGRSMGAAT+LLHGDRDPSIAA+VLDSAF DLT LAEEMVE+GR+ GL VPGIVVK+ +RMIRGTV KTA FN++DL PI HA+RTFIPA+FVAG DDFI PHHS+ I AYAGDKN V VDGDHNSPRP FL+DSVYIFLQ YLQVP EW LD + +G+PPW A G+G + +D VGM RQ+EFQ ALF + AQ++ Sbjct: 38 GYQELVNAIIRPPRARYEVEALGPVEFEFLGKAFKRLDFRLLNDRGHVLECSHWQPNGWRRAERLPCVVYMHGNSSARVEALPQLSLALSLGATLVSFDF-AGSGRSGGEHVSLGYYERDDLKAVIEHLRKSGQVSTIALWGRSMGAATALLHGDRDPSIAALVLDSAFADLTQLAEEMVERGRQAGLTVPGIVVKMVMRMIRGTVTKTANFNVRDLCPIKHANRTFIPALFVAGLADDFIKPHHSKQICEAYAGDKNFVTVDGDHNSPRPGFLFDSVYIFLQRYLQVPPEWGLDRENTVMGVPPWHFASGGSGMSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGVDGAPSVGMTRARQAEFQTALFHMLAQER 419
BLAST of mRNA_C-australica_Contig_1026.5.6 vs. uniprot
Match: A0A7S2G2Q1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2Q1_9STRA) HSP 1 Score: 450 bits (1158), Expect = 3.190e-150 Identity = 228/370 (61.62%), Postives = 279/370 (75.41%), Query Frame = 2 Query: 152 EEVGYWQMAKQGYQELVHAIIRPPRAQYSISDLGPTSFAFMGKKFKRTDFQLLNPRGNRLMCSHWEPDGWSNAEQVPCLVYLHGNSSARVEALGQLSLCLSLGISMMAFDCSAGSGKSDGEWVSLGYYERDDLDSVVNYLRGTHSVSTIALWGRSMGAATSLLHGDRDPSIAAMVLDSAFTDLTHLAEEMVEKGREQGLNVPGIVVKIALRMIRGTVQKTAGFNIKDLSPISHADRTFIPAMFVAGKGDDFIGPHHSEMIHGAYAGDKNIVLVDGDHNSPRPRFLYDSVYIFLQNYLQVPFEWALDGGSRYI-GLPPWSQAETG------AGTRHQEVTLEEYMAMDQQIDVGMNMERQSEFQQALFQVF 1240 E++ YW+ A+ GYQELV+AIIRPPRA Y + LGP F F +KF+RTDF+L N RG R +CSHWEP A ++PC++Y+HGNSSARVEA+ QLSLCL+LG +M AFD S GSG+SDGE+VSLG++ER+DL VV++LR + VSTIALWGRSMGAAT+LLHGDRDPSIAAM+LDS F DLT LAEEMV+KGRE GL VPG VV IA+R IR +VQK AGFNI DLSPI+HAD+ FIPA+FVAG+GDDFI HHS+ IH YAGDKN+V+V+GDHNSPRPRFL+DSV IFLQ YLQ+P +W+L Y G PPW G A ++ + A +++GM ERQ E QQAL+ + Sbjct: 33 EDMSYWKQAQVGYQELVNAIIRPPRADYDDAHLGPKQFYFGKEKFQRTDFELRNERGMRFVCSHWEPMN-RRAAELPCVIYMHGNSSARVEAVPQLSLCLALGATMFAFDFS-GSGRSDGEYVSLGFFEREDLKVVVDFLRASERVSTIALWGRSMGAATALLHGDRDPSIAAMILDSPFADLTMLAEEMVDKGRESGLTVPGFVVSIAIRWIRSSVQKQAGFNINDLSPIAHADQCFIPALFVAGEGDDFIKHHHSQQIHEKYAGDKNLVIVEGDHNSPRPRFLFDSVTIFLQTYLQIPPDWSLPDADPYNNGYPPWQSGMHGFMGSSVARLDDVQMRMAGLDASFDDLNLGMTAERQHETQQALYNML 400
BLAST of mRNA_C-australica_Contig_1026.5.6 vs. uniprot
Match: A0A7S2SU53_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU53_9STRA) HSP 1 Score: 445 bits (1145), Expect = 1.290e-148 Identity = 227/366 (62.02%), Postives = 270/366 (73.77%), Query Frame = 2 Query: 149 GEEVGYWQMAKQGYQELVHAIIRPPRAQYSISDLGPTSFAFMGKKFKRTDFQLLNPRGNRLMCSHWEPDGWSNAEQVPCLVYLHGNSSARVEALGQLSLCLSLGISMMAFDCSAGSGKSDGEWVSLGYYERDDLDSVVNYLRGTHSVSTIALWGRSMGAATSLLHGDRDPSIAAMVLDSAFTDLTHLAEEMVEKGREQGLNVPGIVVKIALRMIRGTVQKTAGFNIKDLSPISHADRTFIPAMFVAGKGDDFIGPHHSEMIHGAYAGDKNIVLVDGDHNSPRPRFLYDSVYIFLQNYLQVPFEWALDGGSRYI-GLPPWSQAETGAGTRHQEVTLEEYMAMDQQIDVGMNMERQSEFQQALFQVFA 1243 G + YW+MAK GYQELV+AIIRPPRA+Y LGPT F F G +F RTDF+L N RG ++ CSHWEP A +PC++Y+HGN+SAR EAL QL+LCLSLG +M+AFD GSG S+G+WVSLGY+ER+DL VV +LR + SVSTIALWGRSMGAAT+LLHGDRDPSIAAMVLDS F DL LAEEMV+KGR+QGL VPG VV IA+RMIR +VQK AGFN++DLSP +HADR FIPA+FVAG+ DDFI PHH++ IH YAGDKN V V GDHNS RPRFLYDS IFLQ LQ+P WAL G Y G PPW + L+ Y MD +GM +RQ E QQA++ + + Sbjct: 46 GRSMSYWEMAKVGYQELVNAIIRPPRAEYLPEQLGPTEFTFGGHQFTRTDFELTNERGMKIQCSHWEPVE-RKAVTLPCVIYMHGNASARPEALSQLALCLSLGATMVAFDF-CGSGLSEGDWVSLGYFEREDLKVVVEHLRASDSVSTIALWGRSMGAATALLHGDRDPSIAAMVLDSPFADLNQLAEEMVDKGRQQGLTVPGFVVGIAIRMIRSSVQKQAGFNVRDLSPAAHADRCFIPALFVAGEDDDFIAPHHAQQIHDKYAGDKNFVKVAGDHNSSRPRFLYDSAAIFLQTCLQIPDGWALTGVDAYNHGSPPWYSS-----------ALDMYRGMD----LGMTRQRQMETQQAVYGMLS 394
BLAST of mRNA_C-australica_Contig_1026.5.6 vs. uniprot
Match: A0A7S2FNH9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FNH9_9STRA) HSP 1 Score: 438 bits (1126), Expect = 8.280e-146 Identity = 223/363 (61.43%), Postives = 275/363 (75.76%), Query Frame = 2 Query: 164 YWQMAKQGYQELVHAIIRPPRAQYSISDLGPTSFAFMGKKFKRTDFQLLNPRGNRLMCSHWEPDGWSNAEQ--VPCLVYLHGNSSARVEALGQLSLCLSLGISMMAFDCSAGSGKSDGEWVSLGYYERDDLDSVVNYLRGTHSVSTIALWGRSMGAATSLLHGDRDPSIAAMVLDSAFTDLTHLAEEMVEKGREQGLNVPGIVVKIALRMIRGTVQKTAGFNIKDLSPISHADRTFIPAMFVAGKGDDFIGPHHSEMIHGAYAGDKNIVLVDGDHNSPRPRFLYDSVYIFLQNYLQVPFEWALDGGSRYI-GLPPWSQAETGAGTRHQEVTLEEYMAMDQQIDVGMNMERQSEFQQALFQVFA 1243 YW+M KQGYQELV+AIIRPPRA Y + LGP+ F F ++F+R D +L N R R+ CSHW+ SN +Q PC++Y+HGNSSAR+EA+ QLSLCL+LG+++ AFD + GSG SDGE+VSLG++ER+DL +VV+YLR + +VSTIALWGRSMGAATSLLHGDRDPSIAAMVLDS F+DLT LAEEMV+KGR+QGL VPG VV IA+RMI+ +VQK AGF+IKDLSPI+HADR FIPA+FVAG+GDDFI P HS IH YAGDKN+V+V+GDHNS RPRFL+DSV IFLQ YLQ+P + L Y GL PW G+ E + D+GM ERQ E Q+AL+ + + Sbjct: 41 YWEMCKQGYQELVNAIIRPPRADYEEAHLGPSKFYFGNQEFQRDDMELRNDRDMRIKCSHWKASSRSNKKQGPKPCVIYMHGNSSARLEAIPQLSLCLALGVTLFAFDFT-GSGLSDGEYVSLGFFEREDLKAVVHYLRESGNVSTIALWGRSMGAATSLLHGDRDPSIAAMVLDSPFSDLTQLAEEMVDKGRDQGLTVPGFVVSIAIRMIKSSVQKQAGFDIKDLSPIAHADRCFIPALFVAGEGDDFIKPDHSRNIHAKYAGDKNLVIVEGDHNSQRPRFLFDSVAIFLQTYLQLPPDSGLTNVDPYNNGLAPWHGNHQDTGSPFSEFGAQ---------DLGMTSERQRETQRALYNMLS 393
BLAST of mRNA_C-australica_Contig_1026.5.6 vs. uniprot
Match: A0A6U0UL71_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UL71_9STRA) HSP 1 Score: 429 bits (1102), Expect = 7.790e-141 Identity = 220/400 (55.00%), Postives = 285/400 (71.25%), Query Frame = 2 Query: 152 EEVGYWQMAKQGYQELVHAIIRPPRAQYSISDLGPTSFAFMGKKFKRTDFQLLNPRGNRLMCSHWEP---DGWSNAEQVPCLVYLHGNSSARVEALGQLSLCLSLGISMMAFDCSAGSGKSDGEWVSLGYYERDDLDSVVNYLRGTHSVSTIALWGRSMGAATSLLHGDRDPSIAAMVLDSAFTDLTHLAEEMVEKGREQGLNVPGIVVKIALRMIRGTVQKTAGFNIKDLSPISHADRTFIPAMFVAGKGDDFIGPHHSEMIHGAYAGDKNIVLVDGDHNSPRPRFLYDSVYIFLQNYLQVPFEWALDGGSRYIGLPPWSQAETGAGTRHQEVTLEEYMAMD-QQIDV----GMNMERQSEFQQALFQVFAQQKDGGGGGAGLSGGKGTNCGDTSSSDG 1327 E++ YWQMAKQGYQELV+AI+RPPRA Y LGP F F G++F R+DF +LN RG L CS WEP G +N +PC++Y+HGNSSAR E L QL L L +G +M+AFD AGSG+SDGE+VSLG YE+DDL +V+ +LR + VSTIALWGRSMGAAT+L+HG +DPSIAAM+LDS F++L +A++M+ +GREQG+ +P +V IALRM+R TVQ+TA FNI+D SPI++ + FIPA+F AG+GDDFI P HS+ +H AY GDKNI+LVDGDHNSPRP+F++DS IFLQ YLQVP +WALDG RY +PPW G + E + E + +D ++++ GM+ ERQ+E Q L +F GT+ GD SSSDG Sbjct: 54 EQMSYWQMAKQGYQELVNAIVRPPRANYEREHLGPDQFMFCGREFMRSDFPVLNNRGQTLRCSFWEPLERRGDANGA-LPCVIYMHGNSSARPECLPQLGLVLGMGCTMLAFDF-AGSGQSDGEYVSLGVYEKDDLAAVIAWLRESGRVSTIALWGRSMGAATALMHGGQDPSIAAMILDSPFSNLQDIADDMLARGREQGVRIPQFIVAIALRMLRSTVQRTANFNIRDCSPINYIESCFIPALFCAGRGDDFITPSHSQRLHDAYPGDKNIILVDGDHNSPRPKFMFDSAGIFLQRYLQVPRDWALDGYERYCNVPPWVSINDTYGLGYGEYNVYERLGLDPHEVELLYTGGMSDERQAEIQANLMHMF-----------------GTDVGDASSSDG 434
BLAST of mRNA_C-australica_Contig_1026.5.6 vs. uniprot
Match: A0A7S2PJU5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PJU5_9STRA) HSP 1 Score: 424 bits (1089), Expect = 6.860e-138 Identity = 223/407 (54.79%), Postives = 286/407 (70.27%), Query Frame = 2 Query: 101 RVRRVPSDA-----------REGGDGEGEE---------VGYWQMAKQGYQELVHAIIRPPRAQYSISDLGPTSFAFMGKKFKRTDFQLLNPRGNRLMCSHWEPDGWSNAEQVPCLVYLHGNSSARVEALGQLSLCLSLGISMMAFDCSAGSGKSDGEWVSLGYYERDDLDSVVNYLRGTHSVSTIALWGRSMGAATSLLHGDRDPSIAAMVLDSAFTDLTHLAEEMVEKGREQGLNVPGIVVKIALRMIRGTVQKTAGFNIKDLSPISHADRTFIPAMFVAGKGDDFIGPHHSEMIHGAYAGDKNIVLVDGDHNSPRPRFLYDSVYIFLQNYLQVPFEWALD-GGSRYIGLPPW----SQAETGAGTRHQEVTLEEYMAMDQQIDVGMNMERQSEFQQALFQVFAQ 1246 R RR+PS+A R GGD + + Y+QMAK GYQELV+A IRPPRA+Y + LGP +F F G++F RTDF L RG L CSHWEP ++++PC++Y+HGNSSARVE L QLS LSLG+++ AFD AGSG+SDGE+VSLG+YER+DL V+ +LR T+ VSTIALWGRSMGAAT+L+HGDRDPSIA M+LDS+F DLT LA EMVEKGREQG+ VP VV IA+RMI+ +V+K A F+IK +SPI+HAD+ FIPA+FVAG+ DDFI P HSE IH YAGDKN++LV+GDHNSPRP+F++DSV IFLQ LQ+P W L+ + PPW S+ T + + +Q+ ++GM +ERQ E Q +LF++ Q Sbjct: 131 RHRRIPSNAQVQSAAANSSERSGGDRNNRQETDAERQAKLTYFQMAKMGYQELVNAFIRPPRAEYKVEALGPPAFNFCGRRFTRTDFALKTKRGMALQCSHWEPVD-RTSDRIPCVIYMHGNSSARVEVLPQLSYLLSLGVAVFAFDF-AGSGQSDGEYVSLGFYEREDLMCVIAHLRNTNVVSTIALWGRSMGAATALMHGDRDPSIACMILDSSFADLTQLAVEMVEKGREQGIVVPQFVVHIAIRMIKNSVKKLANFDIKSISPIAHADKCFIPALFVAGEHDDFIHPRHSEQIHAKYAGDKNMILVEGDHNSPRPKFMFDSVSIFLQTCLQIPTSWNLNVHPGMNLMAPPWFYPGSKIYTAVKNKQSRSRSSQKHQAEQK-ELGMTLERQREIQASLFKMLGQ 534
BLAST of mRNA_C-australica_Contig_1026.5.6 vs. uniprot
Match: A0A7S4QUM2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QUM2_9STRA) HSP 1 Score: 420 bits (1079), Expect = 5.060e-137 Identity = 218/392 (55.61%), Postives = 273/392 (69.64%), Query Frame = 2 Query: 146 EGEEVGYWQMAKQGYQELVHAIIRPPRAQYSISDLGPTSFAFMGKKFKRTDFQLLNPRGNRLMCSHWEPDGWSNAEQVPCLVYLHGNSSARVEALGQLSLCLSLGISMMAFDCSAGSGKSDGEWVSLGYYERDDLDSVVNYLRGTHSVSTIALWGRSMGAATSLLHGDRDPSIAAMVLDSAFTDLTHLAEEMVEKGREQGLNVPGIVVKIALRMIRGTVQKTAGFNIKDLSPISHADRTFIPAMFVAGKGDDFIGPHHSEMIHGAYAGDKNIVLVDGDHNSPRPRFLYDSVYIFLQNYLQVPFEWALD---------------------GGSRYIGLPPWSQAETGAGTRHQEVTLEEYMAMDQQIDVGMNMERQSEFQQALFQVFAQQKDG 1258 E +++ Y+QMA+ GYQELV+AIIRPPRA Y LGP +F F G++F RTDF L RG L CSHWEP ++++P ++Y+HGNSSARVE L QLS LSLG+++ +FD AGSGKSDGE+VSLGYYER+DL V+ +LR T+ VSTIALWGRSMGAATSL+HGDRDPSIA M+LDS F DLT LAEEMVEK REQG+NVP VV +A+RMI+ +VQK A FNIK +SPI+HAD+ FIPA+FVAG+ DDFI HSE IH YAGDKN+++V+GDHNSPRP+F++DSV IFLQ LQ+P WAL GG R + P + G + +A D ++GM +ERQ E Q +LF++ DG Sbjct: 112 EKQKLSYFQMARIGYQELVNAIIRPPRADYKEEALGPPAFTFCGRRFTRTDFTLQTKRGLNLQCSHWEPVE-RTSDRIPVVIYMHGNSSARVEVLPQLSYLLSLGLAVFSFDF-AGSGKSDGEYVSLGYYEREDLMCVIAHLRATNVVSTIALWGRSMGAATSLMHGDRDPSIACMILDSPFADLTQLAEEMVEKAREQGINVPNFVVSVAIRMIKNSVQKQANFNIKHISPIAHADKCFIPALFVAGEHDDFIDKKHSEAIHAKYAGDKNLIIVEGDHNSPRPKFMFDSVSIFLQTCLQIPNSWALRVHPGMNLMAPPWYYPGVSAPRGGIRGVTSPQRKGPKRGQPSNEAAEAAAAAVATDAD-EMGMTLERQKEIQASLFKMLGSADDG 500
BLAST of mRNA_C-australica_Contig_1026.5.6 vs. uniprot
Match: A0A836CG95_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG95_9STRA) HSP 1 Score: 409 bits (1050), Expect = 1.700e-136 Identity = 196/280 (70.00%), Postives = 231/280 (82.50%), Query Frame = 2 Query: 194 ELVHAIIRPPRAQYSISDLGPTSFAFMGKKFKRTDFQLLNPRGNRLMCSHWEPDGWSNAEQVPCLVYLHGNSSARVEALGQLSLCLSLGISMMAFDCSAGSGKSDGEWVSLGYYERDDLDSVVNYLRGTHSVSTIALWGRSMGAATSLLHGDRDPSIAAMVLDSAFTDLTHLAEEMVEKGREQGLNVPGIVVKIALRMIRGTVQKTAGFNIKDLSPISHADRTFIPAMFVAGKGDDFIGPHHSEMIHGAYAGDKNIVLVDGDHNSPRPRFLYDSVYIFLQ 1033 ELV+AIIRPPRA+YSI LGP F F G+ F+R+DF+L NPRG L CSHWEPDGW AEQ+PC+VYLHGNSSAR EAL QL+L LSLG +++AFDCS GSG SDGE+VSLGY+ERDDL +V+N+LR + V +ALWGRSMGAAT+LLHGDRDP IAAMVLDSAF DLT LA EMV++GR+ GL VP +V +ALRM+R +V + A FNIKDL PI HA+RT+IPA+FV GDDFI HHS+ IH AYAGDKN+VLVDGDHNS RP FL+DS+YIFLQ Sbjct: 2 ELVNAIIRPPRARYSIGSLGPRKFKFNGRAFRRSDFELTNPRGMALKCSHWEPDGWRVAEQLPCVVYLHGNSSARPEALPQLALVLSLGATLLAFDCS-GSGMSDGEYVSLGYWERDDLGAVINHLRASGDVGAVALWGRSMGAATALLHGDRDPGIAAMVLDSAFADLTLLANEMVQRGRDAGLAVPRLVANVALRMVRASVARAANFNIKDLCPIEHANRTYIPALFVHATGDDFIRAHHSQQIHDAYAGDKNLVLVDGDHNSQRPDFLHDSIYIFLQ 280
BLAST of mRNA_C-australica_Contig_1026.5.6 vs. uniprot
Match: A0A448ZBJ7_9STRA (Hydrolase_4 domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZBJ7_9STRA) HSP 1 Score: 412 bits (1059), Expect = 2.470e-134 Identity = 218/383 (56.92%), Postives = 272/383 (71.02%), Query Frame = 2 Query: 158 VGYWQMAKQGYQELVHAIIRPPRAQYSISDLGPTSFAFMGKKFKRTDFQLLNPRGNRLMCSHWEPDGWSNAEQVPCLVYLHGNSSARVEALGQLSLCLSLGISMMAFDCSAGSGKSDGEWVSLGYYERDDLDSVVNYLRGTHSVSTIALWGRSMGAATSLLHGDRDPSIAAMVLDSAFTDLTHLAEEMVEKGREQGLNVPGIVVKIALRMIRGTVQKTAGFNIKDLSPISHADRTFIPAMFVAGKGDDFIGPHHSEMIHGAYAGDKNIVLVDGDHNSPRPRFLYDSVYIFLQNYLQVPFEWALD-GGSRYIGLPPW-----------SQAETGAGTRHQEV--TLEEYMAMDQQID---VGMNMERQSEFQQALFQVFAQQKD 1255 + Y+QMA+ GYQELV+AIIRPPRA Y + LGP +F F GK+F RTDF L RG L CSHWEP A+++P ++Y+HGNSSARVE L QLS LS+G+++ +FD AGSGKSDGE+VSLGYYER+DL VV++LR T VSTIALWGRSMGAATSL+ G RDPSIA M+LDS F DLT LAEEMVEKGR+QG+ VP VV +ALRMI G+V+K A NIK++SPISHAD+ FIPA FVAG+ DDFI HH+E I+ YAGDKNI++V+GDHNSPRP+F++DS IFLQ LQ+P WAL S + PPW SQ + G++ Q + T ++ D +GM +RQ E Q +LF++ Q D Sbjct: 113 LSYFQMARLGYQELVNAIIRPPRADYKMEALGPPAFTFCGKRFTRTDFTLQTKRGFNLECSHWEPVE-RIADKIPIVIYMHGNSSARVEVLPQLSYLLSMGVAVFSFDF-AGSGKSDGEYVSLGYYEREDLTCVVSHLRATGVVSTIALWGRSMGAATSLMFGSRDPSIACMILDSPFADLTQLAEEMVEKGRDQGIVVPTFVVSMALRMITGSVKKQANVNIKNISPISHADKCFIPAFFVAGEHDDFIKKHHAEAIYKKYAGDKNIIIVEGDHNSPRPKFMFDSASIFLQTCLQIPSNWALPVPPSMNLMCPPWYFEMYQNRMRASQRSSARGSQQQRLSKTGKDPSGKHGNFDGDQMGMTQDRQREIQASLFKMLGQADD 493 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1026.5.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1026.5.6 >prot_C-australica_Contig_1026.5.6 ID=prot_C-australica_Contig_1026.5.6|Name=mRNA_C-australica_Contig_1026.5.6|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=539bp MGNAESRELPQTPDVTRYDLDEADRVRRVPSDAREGGDGEGEEVGYWQMAback to top mRNA from alignment at C-australica_Contig_1026:9886..14188- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1026.5.6 ID=mRNA_C-australica_Contig_1026.5.6|Name=mRNA_C-australica_Contig_1026.5.6|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4303bp|location=Sequence derived from alignment at C-australica_Contig_1026:9886..14188- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1026:9886..14188- >mRNA_C-australica_Contig_1026.5.6 ID=mRNA_C-australica_Contig_1026.5.6|Name=mRNA_C-australica_Contig_1026.5.6|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1617bp|location=Sequence derived from alignment at C-australica_Contig_1026:9886..14188- (Chrysoparadoxa australica CS_1217)back to top |