mRNA_C-australica_Contig_10252.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10252.1.1 vs. uniprot
Match: K0CZM0_ALTMS (Potassium uptake protein integral membrane component KtrB n=22 Tax=Alteromonadaceae TaxID=72275 RepID=K0CZM0_ALTMS) HSP 1 Score: 520 bits (1338), Expect = 4.900e-183 Identity = 273/276 (98.91%), Postives = 274/276 (99.28%), Query Frame = 1 Query: 1 YTISAFNNAGFALSGDSLSAYVGDPIINITISALFIIGGLGFSVWIELQKKRRWQRISVYAKTMILGTLIVNVTAFLLIFVIESDNPATLANLDTQSALWASWFQAVTPRTAGFNTLDIASLEDPTTALMLLLMFIGGGSMSTASGIKLMTFIVLIIAAYNYIQRGAAPRLFGRTISNDTISKALALTMISIGITWIAIFLLLMSEKADFLDIVFEAVSALGTVGLSRGLTGELSNSGEWIIILLMYAGRLGPLTFAYFIASPRISRIKYPEAKLA 828 YTISAFNNAGFALSGDSLSAYVGDP+INITISALFIIGGLGFSVWIEL KKRRWQRISVYAKTMILGTLIVNVTAFLLIFVIESDNPATLANLDTQSALWASWFQAVTPRTAGFNTLDIASLEDPTTALMLLLMFIGGGSMSTASGIKLMTFIVLIIAAYNYIQRGAAPRLFGRTISNDTISKALALTMISIGITWIAIFLLLMSEKADFLDIVFEAVSALGTVGLSRGLTGELSNSGEWIIILLMYAGRLGPLT AYFIASPRISRIKYPEAKLA Sbjct: 177 YTISAFNNAGFALSGDSLSAYVGDPVINITISALFIIGGLGFSVWIELHKKRRWQRISVYAKTMILGTLIVNVTAFLLIFVIESDNPATLANLDTQSALWASWFQAVTPRTAGFNTLDIASLEDPTTALMLLLMFIGGGSMSTASGIKLMTFIVLIIAAYNYIQRGAAPRLFGRTISNDTISKALALTMISIGITWIAIFLLLMSEKADFLDIVFEAVSALGTVGLSRGLTGELSNSGEWIIILLMYAGRLGPLTLAYFIASPRISRIKYPEAKLA 452
BLAST of mRNA_C-australica_Contig_10252.1.1 vs. uniprot
Match: A0A7R7JA13_9ALTE (Ktr system potassium transporter B n=1 Tax=Alteromonas sp. KC14 TaxID=2795689 RepID=A0A7R7JA13_9ALTE) HSP 1 Score: 443 bits (1140), Expect = 6.030e-153 Identity = 228/276 (82.61%), Postives = 254/276 (92.03%), Query Frame = 1 Query: 1 YTISAFNNAGFALSGDSLSAYVGDPIINITISALFIIGGLGFSVWIELQKKRRWQRISVYAKTMILGTLIVNVTAFLLIFVIESDNPATLANLDTQSALWASWFQAVTPRTAGFNTLDIASLEDPTTALMLLLMFIGGGSMSTASGIKLMTFIVLIIAAYNYIQRGAAPRLFGRTISNDTISKALALTMISIGITWIAIFLLLMSEKADFLDIVFEAVSALGTVGLSRGLTGELSNSGEWIIILLMYAGRLGPLTFAYFIASPRISRIKYPEAKLA 828 YTISAFNNAGFALS DSLSAYVG P+INITI+ALFI+GGLGFSVW+EL KKR+WQ ISVYAKTMILGTL +NV AF+ I +IE DNPATL LDT SA+WASWFQAVTPRTAGFNT+DIASLED TTA+MLLLMFIGGGSMSTASGIKLMTF+VL++AAYNYI RGAAP L+G+ IS +T+SKALALT+ISIGITWIAIFLLL++E A FLDIVFEAVSALGTVGLSRGLTG LS+SGE+IIILLMY GRLGPLT AYFIASPR+SRIK+P+AKLA Sbjct: 177 YTISAFNNAGFALSSDSLSAYVGSPVINITITALFIVGGLGFSVWLELLKKRKWQPISVYAKTMILGTLALNVLAFISILMIEIDNPATLGKLDTVSAVWASWFQAVTPRTAGFNTIDIASLEDATTAIMLLLMFIGGGSMSTASGIKLMTFVVLLLAAYNYISRGAAPTLYGKAISTETVSKALALTLISIGITWIAIFLLLITEDAPFLDIVFEAVSALGTVGLSRGLTGGLSDSGEFIIILLMYIGRLGPLTLAYFIASPRMSRIKHPDAKLA 452
BLAST of mRNA_C-australica_Contig_10252.1.1 vs. uniprot
Match: K6XI23_9ALTE (Ktr system potassium uptake protein B n=2 Tax=Paraglaciecola TaxID=1621534 RepID=K6XI23_9ALTE) HSP 1 Score: 386 bits (992), Expect = 4.010e-131 Identity = 195/275 (70.91%), Postives = 235/275 (85.45%), Query Frame = 1 Query: 1 YTISAFNNAGFALSGDSLSAYVGDPIINITISALFIIGGLGFSVWIELQKKRRWQRISVYAKTMILGTLIVNVTAFLLIFVIESDNPATLANLDTQSALWASWFQAVTPRTAGFNTLDIASLEDPTTALMLLLMFIGGGSMSTASGIKLMTFIVLIIAAYNYIQRGAAPRLFGRTISNDTISKALALTMISIGITWIAIFLLLMSEKADFLDIVFEAVSALGTVGLSRGLTGELSNSGEWIIILLMYAGRLGPLTFAYFIASPRISRIKYPEAKL 825 YTISAFNNAGFAL+ DSLS+YVG P IN+TI+ LFIIGGLGFSVWIEL KKR+WQ +SVY+K MILGT++VNV A +L ++IE DNP TL +LD SA WA+WFQAVTPRTAGFNTL I+ LE+ +T LMLLLMF+GGGSMSTASGIKL+TFIVLI++AY+Y++R +P L GR IS++T +KALALT+IS G++W+AIFLLL++E A FLD+ FEA+SALGTVGLSRGLTG+LSN GE III+LMY GRLGPLT AYF+ASPR R+ YP L Sbjct: 133 YTISAFNNAGFALNEDSLSSYVGSPTINLTITGLFIIGGLGFSVWIELLKKRKWQGLSVYSKVMILGTVVVNVIAVVLFYIIEEDNPNTLGSLDGVSAFWATWFQAVTPRTAGFNTLAISELENASTFLMLLLMFVGGGSMSTASGIKLVTFIVLILSAYSYLKRDPSPTLCGRAISSETRNKALALTLISTGVSWVAIFLLLITEDAPFLDVAFEAISALGTVGLSRGLTGDLSNIGELIIIILMYMGRLGPLTLAYFLASPRNVRVLYPNGTL 407
BLAST of mRNA_C-australica_Contig_10252.1.1 vs. uniprot
Match: A0A1E7ZEU7_9ALTE (Ktr system potassium transporter B n=1 Tax=Alteromonas confluentis TaxID=1656094 RepID=A0A1E7ZEU7_9ALTE) HSP 1 Score: 385 bits (990), Expect = 3.420e-130 Identity = 194/276 (70.29%), Postives = 235/276 (85.14%), Query Frame = 1 Query: 1 YTISAFNNAGFALSGDSLSAYVGDPIINITISALFIIGGLGFSVWIELQKKRRWQRISVYAKTMILGTLIVNVTAFLLIFVIESDNPATLANLDTQSALWASWFQAVTPRTAGFNTLDIASLEDPTTALMLLLMFIGGGSMSTASGIKLMTFIVLIIAAYNYIQRGAAPRLFGRTISNDTISKALALTMISIGITWIAIFLLLMSEKADFLDIVFEAVSALGTVGLSRGLTGELSNSGEWIIILLMYAGRLGPLTFAYFIASPRISRIKYPEAKLA 828 YTISAFNNAGFALS DSLSAYV DP++NITI+ALFI GGLGFSVWI+L KK++WQ ++ Y+KTM+LGTLI+NV A LLI++IE DNP TL LD WASWFQAVTPRTAGFNTLDI +LED + LMLLLMFIGGGSMSTASGIK++TF+VL+ A YN+++R AP LF RTI +T+SKALALT+IS G+TWIAIF+L ++E A F+DIVFEAVSALGTVGLSRGLTG+LS GE III+LM+ GRLGPLT AY +ASPR R+++P+++L+ Sbjct: 177 YTISAFNNAGFALSSDSLSAYVNDPVVNITITALFITGGLGFSVWIDLVKKKKWQMLTPYSKTMLLGTLIINVAALLLIYLIEYDNPETLGKLDAAGKWWASWFQAVTPRTAGFNTLDINALEDGSVTLMLLLMFIGGGSMSTASGIKVVTFVVLLTATYNFLRREHAPTLFQRTIRPETVSKALALTVISAGVTWIAIFVLTITETAPFIDIVFEAVSALGTVGLSRGLTGDLSAWGEGIIIVLMFLGRLGPLTLAYLLASPRQRRVRFPDSRLS 452
BLAST of mRNA_C-australica_Contig_10252.1.1 vs. uniprot
Match: A0A385MSM6_9ALTE (Ktr system potassium transporter B n=3 Tax=Alteromonadaceae TaxID=72275 RepID=A0A385MSM6_9ALTE) HSP 1 Score: 382 bits (980), Expect = 1.120e-128 Identity = 193/276 (69.93%), Postives = 230/276 (83.33%), Query Frame = 1 Query: 1 YTISAFNNAGFALSGDSLSAYVGDPIINITISALFIIGGLGFSVWIELQKKRRWQRISVYAKTMILGTLIVNVTAFLLIFVIESDNPATLANLDTQSALWASWFQAVTPRTAGFNTLDIASLEDPTTALMLLLMFIGGGSMSTASGIKLMTFIVLIIAAYNYIQRGAAPRLFGRTISNDTISKALALTMISIGITWIAIFLLLMSEKADFLDIVFEAVSALGTVGLSRGLTGELSNSGEWIIILLMYAGRLGPLTFAYFIASPRISRIKYPEAKLA 828 YTISAFNNAGFAL DSLS YV DP++NITI+ALFI GGLGFSVWI+L KKR WQ ++ Y+KTMI GT+I+NV A LLI+VIE DNP TL LD WASWFQAVTPRTAGFNTLDIA+LED + LMLLLMFIGGGSMSTASGIK++TF+VL+ A YN+++R AP LF RTI +T+SKALALT+IS G+TW+AIFLL +E A FLDIVFEAVSA+GTVGLSRGLTG LS +GE III+LM+ GRLGPLT AY +ASPR ++YP+++++ Sbjct: 177 YTISAFNNAGFALQPDSLSRYVSDPVVNITITALFITGGLGFSVWIDLVKKRSWQTLTPYSKTMIAGTVIINVVALLLIYVIEYDNPDTLGKLDAAGKWWASWFQAVTPRTAGFNTLDIAALEDGSVTLMLLLMFIGGGSMSTASGIKVVTFVVLLTATYNFLRRDHAPTLFQRTIRTETVSKALALTVISGGVTWVAIFLLTTTEDAPFLDIVFEAVSAMGTVGLSRGLTGSLSAAGEGIIIVLMFLGRLGPLTLAYLLASPRQRHVRYPDSRIS 452
BLAST of mRNA_C-australica_Contig_10252.1.1 vs. uniprot
Match: A0A3S5BKC4_9ALTE (Trk system potassium uptake protein TrkH n=1 Tax=Alteromonas sp. 76-1 TaxID=2358187 RepID=A0A3S5BKC4_9ALTE) HSP 1 Score: 379 bits (974), Expect = 9.090e-128 Identity = 191/275 (69.45%), Postives = 232/275 (84.36%), Query Frame = 1 Query: 1 YTISAFNNAGFALSGDSLSAYVGDPIINITISALFIIGGLGFSVWIELQKKRRWQRISVYAKTMILGTLIVNVTAFLLIFVIESDNPATLANLDTQSALWASWFQAVTPRTAGFNTLDIASLEDPTTALMLLLMFIGGGSMSTASGIKLMTFIVLIIAAYNYIQRGAAPRLFGRTISNDTISKALALTMISIGITWIAIFLLLMSEKADFLDIVFEAVSALGTVGLSRGLTGELSNSGEWIIILLMYAGRLGPLTFAYFIASPRISRIKYPEAKL 825 YTISAFNNAGFALS DSLS YVG P+INITI+ALFI+GGLGFSVWI+L KKR WQ ++VY+K MI GT+++N A LL++ IE DNP TLANLD S WA+WFQAVTPRTAGFNTL+I++LE+ TT LMLLLMFIGGGSMSTASGIKL+TFIVLII+AY+Y++R +P L+GR++S +T +KALAL++IS ITWIAIF L ++EK + LD +FEA+SALGTVGLSRG+TG LS++GE I+ILLM+ GRLGPLT AY +ASP RIKYP L Sbjct: 177 YTISAFNNAGFALSADSLSTYVGSPVINITITALFIVGGLGFSVWIDLIKKRAWQTLTVYSKIMISGTVVINSIALLLVYFIEKDNPNTLANLDGASTFWAAWFQAVTPRTAGFNTLEISALENATTWLMLLLMFIGGGSMSTASGIKLVTFIVLIISAYSYLRRNPSPSLYGRSLSKETRAKALALSLISAAITWIAIFFLSITEKTNLLDTIFEAISALGTVGLSRGMTGSLSDAGEAIVILLMFVGRLGPLTIAYILASPMPVRIKYPSDTL 451
BLAST of mRNA_C-australica_Contig_10252.1.1 vs. uniprot
Match: UPI00168A8C04 (Ktr system potassium transporter B n=2 Tax=Salinimonas profundi TaxID=2729140 RepID=UPI00168A8C04) HSP 1 Score: 379 bits (973), Expect = 1.330e-127 Identity = 195/276 (70.65%), Postives = 230/276 (83.33%), Query Frame = 1 Query: 1 YTISAFNNAGFALSGDSLSAYVGDPIINITISALFIIGGLGFSVWIELQKKRRWQRISVYAKTMILGTLIVNVTAFLLIFVIESDNPATLANLDTQSALWASWFQAVTPRTAGFNTLDIASLEDPTTALMLLLMFIGGGSMSTASGIKLMTFIVLIIAAYNYIQRGAAPRLFGRTISNDTISKALALTMISIGITWIAIFLLLMSE-KADFLDIVFEAVSALGTVGLSRGLTGELSNSGEWIIILLMYAGRLGPLTFAYFIASPRISRIKYPEAKL 825 YTISAFNNAGFALS DSL YV DP INI I+ALFI GGLGFSVW+++ KKRRW+ +S Y+K M+ TLI+N+ A LLI+ IE +NPATLA+LDT A+WFQAVTPRTAGFNTLDI ++D + LMLLLMFIGGGSMSTASGIKL+TF+VL++A YNY +R AP LF RTI +T++KALALT+IS+G+TWIAIFLL ++E A F DIVFEAVSALGTVGLSRGLTG LS GE+IIILLMYAGRLGPLT AYF+ASPR R++YPEA+L Sbjct: 177 YTISAFNNAGFALSADSLMPYVSDPTINIVITALFITGGLGFSVWLDIVKKRRWRTLSSYSKAMLSATLIINIVALLLIYAIEYNNPATLASLDTLGKWLAAWFQAVTPRTAGFNTLDIGQMKDASVTLMLLLMFIGGGSMSTASGIKLVTFMVLLLATYNYFRRDPAPTLFNRTIKPETVTKALALTLISLGVTWIAIFLLSITEHNAAFSDIVFEAVSALGTVGLSRGLTGNLSQPGEFIIILLMYAGRLGPLTLAYFLASPRQRRVRYPEARL 452
BLAST of mRNA_C-australica_Contig_10252.1.1 vs. uniprot
Match: UPI0010C0DA3E (TrkH family potassium uptake protein n=1 Tax=Salinimonas lutimaris TaxID=914153 RepID=UPI0010C0DA3E) HSP 1 Score: 379 bits (972), Expect = 1.890e-127 Identity = 196/276 (71.01%), Postives = 228/276 (82.61%), Query Frame = 1 Query: 1 YTISAFNNAGFALSGDSLSAYVGDPIINITISALFIIGGLGFSVWIELQKKRRWQRISVYAKTMILGTLIVNVTAFLLIFVIESDNPATLANLDTQSALWASWFQAVTPRTAGFNTLDIASLEDPTTALMLLLMFIGGGSMSTASGIKLMTFIVLIIAAYNYIQRGAAPRLFGRTISNDTISKALALTMISIGITWIAIFLLLMSEK-ADFLDIVFEAVSALGTVGLSRGLTGELSNSGEWIIILLMYAGRLGPLTFAYFIASPRISRIKYPEAKL 825 YTISAFNNAGFALS DSL YV D IN+ I+ LFI GGLGFSVWI++ KKRRWQ ++ Y+KTM+ GTLI+NV A LLI+ IE +NPATL NLD ASWFQAVTPRTAGFNTLDI +L D + LMLLLMFIGGGSMSTASGIKL+TFIVL++A YNY +R AP LF RTI DTI+KALALT+IS G+TW+AIFLL ++E A FLD+VFEAVSALGTVGLSRGLT +LS++GE III+LMY GRLGPLT AYF+ASPR R++YPE+KL Sbjct: 177 YTISAFNNAGFALSPDSLMPYVDDGFINLVITGLFITGGLGFSVWIDIVKKRRWQSLTAYSKTMLAGTLIINVIALLLIYAIEYNNPATLGNLDATGKWLASWFQAVTPRTAGFNTLDITALRDGSVTLMLLLMFIGGGSMSTASGIKLVTFIVLLLATYNYFRRDPAPTLFQRTIRQDTITKALALTLISAGVTWLAIFLLTITEHHASFLDVVFEAVSALGTVGLSRGLTSKLSDAGEGIIIILMYVGRLGPLTLAYFLASPRQRRVRYPESKL 452
BLAST of mRNA_C-australica_Contig_10252.1.1 vs. uniprot
Match: A0A1Z9XCB2_9ALTE (Ktr system potassium transporter B n=3 Tax=Alteromonadaceae TaxID=72275 RepID=A0A1Z9XCB2_9ALTE) HSP 1 Score: 377 bits (969), Expect = 5.200e-127 Identity = 188/275 (68.36%), Postives = 235/275 (85.45%), Query Frame = 1 Query: 1 YTISAFNNAGFALSGDSLSAYVGDPIINITISALFIIGGLGFSVWIELQKKRRWQRISVYAKTMILGTLIVNVTAFLLIFVIESDNPATLANLDTQSALWASWFQAVTPRTAGFNTLDIASLEDPTTALMLLLMFIGGGSMSTASGIKLMTFIVLIIAAYNYIQRGAAPRLFGRTISNDTISKALALTMISIGITWIAIFLLLMSEKADFLDIVFEAVSALGTVGLSRGLTGELSNSGEWIIILLMYAGRLGPLTFAYFIASPRISRIKYPEAKL 825 YTISAFNNAGFALS DSLS YVG+P+IN+TI+ALFIIGGLGFSVWI+L KKR WQ +SVY+K MI T+I+N A +LI++IE DNP TL L++ S LWA+WFQAVTPRTAGFNT+DI++LED TT L LLLMFIGGGSMSTASGIKL+TF+VLI++AY+Y++R +P +FGR++S++T KALAL ++S ++WIAIF+L ++E ADFLD+VFEAVSALGTVGLSRGLTG+LS++G +II LM+ GRLGPLT AYF+ASPR IKYP + + Sbjct: 177 YTISAFNNAGFALSADSLSYYVGNPVINLTITALFIIGGLGFSVWIDLNKKRAWQTLSVYSKLMISSTIIINGVALILIYLIEKDNPNTLGPLNSTSKLWAAWFQAVTPRTAGFNTVDISALEDATTWLTLLLMFIGGGSMSTASGIKLVTFVVLIMSAYSYLRRDPSPSVFGRSLSSETRGKALALALLSTAVSWIAIFILSITENADFLDVVFEAVSALGTVGLSRGLTGDLSDAGTVVIIFLMFIGRLGPLTIAYFLASPRQVSIKYPNSTI 451
BLAST of mRNA_C-australica_Contig_10252.1.1 vs. uniprot
Match: A0A2D6BFZ8_9RHOB (Ktr system potassium transporter B n=4 Tax=Proteobacteria TaxID=1224 RepID=A0A2D6BFZ8_9RHOB) HSP 1 Score: 377 bits (969), Expect = 5.200e-127 Identity = 191/275 (69.45%), Postives = 233/275 (84.73%), Query Frame = 1 Query: 1 YTISAFNNAGFALSGDSLSAYVGDPIINITISALFIIGGLGFSVWIELQKKRRWQRISVYAKTMILGTLIVNVTAFLLIFVIESDNPATLANLDTQSALWASWFQAVTPRTAGFNTLDIASLEDPTTALMLLLMFIGGGSMSTASGIKLMTFIVLIIAAYNYIQRGAAPRLFGRTISNDTISKALALTMISIGITWIAIFLLLMSEKADFLDIVFEAVSALGTVGLSRGLTGELSNSGEWIIILLMYAGRLGPLTFAYFIASPRISRIKYPEAKL 825 YTISAFNNAGFALS DSLS YVG+P++N+TI+ LFI+GGLGFSVWI+L KKR WQ++SVY+K MI T+IVN A LLI+ IE DNP TLA LDT S WASWFQAVTPRTAGFNT+DI++LE+ TT L LLLMFIGGGSMSTASGIKL+TFIVLI++AY+Y++R +P +FG T+S++T KALALT+IS I W++IF+L ++E A F+DI+FEA+SALGTVGLSRGLTGELS++G +II LM+ GRLGPLT AYF+ASPR RIKYP + L Sbjct: 177 YTISAFNNAGFALSADSLSFYVGNPVVNLTITGLFIVGGLGFSVWIDLIKKRTWQKLSVYSKLMISSTIIVNAIALLLIYSIEKDNPNTLATLDTASQWWASWFQAVTPRTAGFNTVDISALENATTWLTLLLMFIGGGSMSTASGIKLVTFIVLIMSAYSYLRRDPSPAIFGCTLSSETRGKALALTLISTVIAWLSIFILSITENAAFIDIIFEAISALGTVGLSRGLTGELSDAGGLVIIFLMFIGRLGPLTIAYFLASPRQIRIKYPNSTL 451 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10252.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10252.1.1 >prot_C-australica_Contig_10252.1.1 ID=prot_C-australica_Contig_10252.1.1|Name=mRNA_C-australica_Contig_10252.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=276bp YTISAFNNAGFALSGDSLSAYVGDPIINITISALFIIGGLGFSVWIELQKback to top mRNA from alignment at C-australica_Contig_10252:2..829- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10252.1.1 ID=mRNA_C-australica_Contig_10252.1.1|Name=mRNA_C-australica_Contig_10252.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=828bp|location=Sequence derived from alignment at C-australica_Contig_10252:2..829- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10252:2..829- >mRNA_C-australica_Contig_10252.1.1 ID=mRNA_C-australica_Contig_10252.1.1|Name=mRNA_C-australica_Contig_10252.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=828bp|location=Sequence derived from alignment at C-australica_Contig_10252:2..829- (Chrysoparadoxa australica CS_1217)back to top |