mRNA_C-australica_Contig_1024.3.2 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_1024.3.2 vs. uniprot
Match: G8JS23_ERECY (Uncharacterized protein n=1 Tax=Eremothecium cymbalariae (strain CBS 270.75 / DBVPG 7215 / KCTC 17166 / NRRL Y-17582) TaxID=931890 RepID=G8JS23_ERECY) HSP 1 Score: 73.9 bits (180), Expect = 1.680e-11 Identity = 48/142 (33.80%), Postives = 73/142 (51.41%), Query Frame = 1 Query: 277 GLRTKLHHYQLDGVLWMLQKETTIDAGQVSGGILADESCLGKIAQVLGLVVSSRHLQRRGPTLVVCSTEKIRHWMRQVDVHMQSGRELSLISWEGPRRCKDASLLCVQDMIITDYPTFRADLRMHRRGRSLLSGIKWERSVL 702 G+ KL +QL+G+ W+LQ+ET +GGILADE +GK Q + L+++ R + PTLVV T + W +++ H + LS + GP R D L +++T Y + R G +GI E+SVL Sbjct: 153 GMTIKLLPFQLEGLHWLLQRETH---SVYNGGILADEMGMGKTIQTIALLMNDRS---KRPTLVVAPTVALMQWKNEIERH--TAGNLSTYMYHGPNRTIDMGDLADVGVVLTTYAVLESVYRKQVHGFKRKTGIFKEQSVL 286
BLAST of mRNA_C-australica_Contig_1024.3.2 vs. uniprot
Match: A0A178ED86_9PLEO (Uncharacterized protein n=1 Tax=Pyrenochaeta sp. DS3sAY3a TaxID=765867 RepID=A0A178ED86_9PLEO) HSP 1 Score: 69.7 bits (169), Expect = 5.040e-10 Identity = 51/165 (30.91%), Postives = 77/165 (46.67%), Query Frame = 1 Query: 277 GLRTKLHHYQLDGVLWMLQKET---TIDAGQVSGGILADESCLGKIAQVLGLVVSSRHLQR----------------RGPTLVVCSTEKIRHWMRQVDVHMQSGRELSLISWEGPRRCKDASLLCVQDMIITDYPTFRADLRMHRRGRSLLS----GIKWERSVL 702 GL+ KL +Q+DGV WM++KET A GGILAD+ LGK Q L L++S+ ++ +G TLVV I+ W +++ + EL ++ GP R K A L D++IT Y ++ G L + W R++L Sbjct: 389 GLKVKLLPHQVDGVAWMIEKETGNHNKRAKLPKGGILADDMGLGKTVQSLALILSNPRPEKGVEPENKKNKILDITGKG-TLVVAPLALIKQWESEINDKVSKSHELKVLVHHGPNRTKSADKLKQYDVVITTYQVLASEHASCGDGADGLKKGCFAVNWYRTML 552
BLAST of mRNA_C-australica_Contig_1024.3.2 vs. uniprot
Match: A0A6A5SWD8_9PLEO (Uncharacterized protein n=1 Tax=Clathrospora elynae TaxID=706981 RepID=A0A6A5SWD8_9PLEO) HSP 1 Score: 69.7 bits (169), Expect = 5.040e-10 Identity = 51/165 (30.91%), Postives = 80/165 (48.48%), Query Frame = 1 Query: 277 GLRTKLHHYQLDGVLWMLQKET---TIDAGQVSGGILADESCLGKIAQVLGLVVSSRHLQR----------------RGPTLVVCSTEKIRHWMRQVDVHMQSGRELSLISWEGPRRCKDASLLCVQDMIITDYPTFRADLRMHRRGRS-LLSG---IKWERSVL 702 GL+ KL +Q+DGV WM++KET A GGILAD+ LGK Q + L++S+ ++ +G TLVV I+ W +++ + L ++ GP R K A L D++IT Y ++ G S L+ G ++W R++L Sbjct: 378 GLKVKLLPHQVDGVAWMIEKETGNHNKRAKLPKGGILADDMGLGKTVQSIALILSNTRPEKGVEPENKKNKISDSTGKG-TLVVAPLALIKQWEAEINSKVSKSHALKVLVHHGPNRTKSADKLKQYDVVITTYQVLASEHGACGEGPSGLMKGCFAVQWYRTML 541
BLAST of mRNA_C-australica_Contig_1024.3.2 vs. uniprot
Match: UPI001B35F713 (uncharacterized protein n=1 Tax=Cucurbitaria berberidis CBS 394.84 TaxID=1168544 RepID=UPI001B35F713) HSP 1 Score: 69.7 bits (169), Expect = 5.050e-10 Identity = 52/164 (31.71%), Postives = 76/164 (46.34%), Query Frame = 1 Query: 277 GLRTKLHHYQLDGVLWMLQKET---TIDAGQVSGGILADESCLGKIAQVLGLVVSS--------------RHLQRRGP-TLVVCSTEKIRHWMRQVDVHMQSGRELSLISWEGPRRCKDASLLCVQDMIITDYPTFRADLRMHRRGRSLLS----GIKWERSVL 702 GL+ KL +Q+DGV WM++KET A GGILAD+ LGK Q + L++S+ R L+ G TLVV I+ W ++ + EL ++ GP R K A L D++IT Y ++ G L + W R++L Sbjct: 402 GLKVKLLPHQVDGVAWMIEKETGNHNKRAKLPKGGILADDMGLGKTVQSIALILSNPRPEKGVEPENKKNRILEATGKGTLVVAPLALIKQWEAEIHTKVARSHELKVLVHHGPSRTKSAEKLKQYDVVITTYQVLASEHAACGDGPDGLKKGCFAVHWYRTLL 565
BLAST of mRNA_C-australica_Contig_1024.3.2 vs. uniprot
Match: E4ZK15_LEPMJ (Uncharacterized protein n=1 Tax=Leptosphaeria maculans (strain JN3 / isolate v23.1.3 / race Av1-4-5-6-7-8) TaxID=985895 RepID=E4ZK15_LEPMJ) HSP 1 Score: 69.3 bits (168), Expect = 6.990e-10 Identity = 51/164 (31.10%), Postives = 76/164 (46.34%), Query Frame = 1 Query: 277 GLRTKLHHYQLDGVLWMLQKET---TIDAGQVSGGILADESCLGKIAQVLGLVVSS--------------RHLQRRGP-TLVVCSTEKIRHWMRQVDVHMQSGRELSLISWEGPRRCKDASLLCVQDMIITDYPTFRADLRMHRRGRSLLS----GIKWERSVL 702 GL+ KL +Q+DGV WM++KET A GGILAD+ LGK Q + L++S+ + L G TLVV I+ W +++ + EL ++ GP R K A L D++IT Y ++ G L + W R++L Sbjct: 634 GLKVKLLPHQVDGVAWMIEKETGNHNKRAKLPKGGILADDMGLGKTVQAIALILSNPRPEKGVEPENKKNKILDSTGKGTLVVAPLALIKQWEAEINSKVAKSHELKVLVHHGPNRTKSADKLKQYDIVITTYQVLASEHASCGDGPDGLKKGCFAVHWYRTML 797
BLAST of mRNA_C-australica_Contig_1024.3.2 vs. uniprot
Match: A0A2T2P7Y3_CORCC (Uncharacterized protein n=1 Tax=Corynespora cassiicola Philippines TaxID=1448308 RepID=A0A2T2P7Y3_CORCC) HSP 1 Score: 68.9 bits (167), Expect = 9.350e-10 Identity = 48/165 (29.09%), Postives = 77/165 (46.67%), Query Frame = 1 Query: 277 GLRTKLHHYQLDGVLWMLQKETTID---AGQVSGGILADESCLGKIAQVLGLVVSSRHLQR----------------RGPTLVVCSTEKIRHWMRQVDVHMQSGRELSLISWEGPRRCKDASLLCVQDMIITDYPTFRADLRMHRRGRSLLS----GIKWERSVL 702 GL+ KL +Q+DGV WM++KET A GGILAD+ LGK Q + L++S+ ++ +G TL+V I+ W +++ + S L ++ GP R K A L D+++T Y ++ G L + W R++L Sbjct: 527 GLKVKLLPHQVDGVAWMIEKETGAHNKRAKLPKGGILADDMGLGKTVQSIALILSNPRPEKGVEPENKKNKILPTVGKG-TLIVAPLALIKQWEGEINSKVTSSNALKVLVHHGPNRTKSADKLKTYDVVVTTYQVLASEHASCGEGPDGLKKGCFAVHWYRTIL 690
BLAST of mRNA_C-australica_Contig_1024.3.2 vs. uniprot
Match: A0A5M9LKE8_9PLEO (DNA repair protein rad5 n=8 Tax=Pyrenophora tritici-repentis TaxID=45151 RepID=A0A5M9LKE8_9PLEO) HSP 1 Score: 68.6 bits (166), Expect = 1.230e-9 Identity = 59/211 (27.96%), Postives = 92/211 (43.60%), Query Frame = 1 Query: 139 EDLRESMARALVEPLALSPSTRWAEKATENGKGSSASVLKQELKRRGLRTKLHHYQLDGVLWMLQKET---TIDAGQVSGGILADESCLGKIAQVLGLVVSSRHLQR----------------RGPTLVVCSTEKIRHWMRQVDVHMQSGRELSLISWEGPRRCKDASLLCVQDMIITDYPTFRADLRMHRRGRSLLS----GIKWERSVL 702 E+++ + A E P TR E E + +V GL+ KL +Q+DGV WM++KET A GGILAD+ LGK Q L L++S+ ++ +G TLVV I+ W +++ + L ++ GP R K A L D++IT Y ++ + G L + W R++L Sbjct: 308 ENIKALLEGAFDEESEKIPRTRLQEAEPEEEEEDDGTV-------EGLKVKLLPHQVDGVSWMIEKETGNHNKRAKLPKGGILADDMGLGKTVQSLALILSNPRPEKGVEPENKKNKIADSTGKG-TLVVAPLALIKQWESEINTKVTRSHALKVLVHHGPNRTKSADKLKQYDVVITTYNVLGSEHALCGDGPDGLKKGCFAVSWYRTML 510
BLAST of mRNA_C-australica_Contig_1024.3.2 vs. uniprot
Match: L8GGC3_ACACA (SNF2 family Nterminal domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GGC3_ACACA) HSP 1 Score: 68.2 bits (165), Expect = 1.550e-9 Identity = 47/157 (29.94%), Postives = 73/157 (46.50%), Query Frame = 1 Query: 301 YQLDGVLWMLQKETTIDAGQVSGGILADESCLGKIA---------------QVLGLVVSSRHLQRRGPTLVVCSTEKIRHWMRQVDVHMQSGRELSLISWEGPRRCKDASLLCVQDMIITDYPTFRADLRMHRRGR--------SLLSGIKWERSVL 702 YQLDGV WM+ E++ A + GGILAD+ LGK QV+ L ++ R RR P LVVC + W+ ++ + + ++++ G R + L+ D+++T Y T A+ + SLL+ I W R VL Sbjct: 233 YQLDGVKWMVDNESSATA--IKGGILADDMGLGKTVTGAWTPSQIPKSLTIQVIALYLAHR-TARRKPMLVVCMLSTLNQWLDEITTRIAKRKAARVLTYYGSGRSQSKELVESYDIVLTTYGTLAAEFKGKGTDAKAKTAAKPSLLASIHWWRVVL 386
BLAST of mRNA_C-australica_Contig_1024.3.2 vs. uniprot
Match: A0A8K0QTX1_9PLEO (SNF2 family N-terminal domain-containing protein n=1 Tax=Paraphoma chrysanthemicola TaxID=798071 RepID=A0A8K0QTX1_9PLEO) HSP 1 Score: 68.2 bits (165), Expect = 1.680e-9 Identity = 49/165 (29.70%), Postives = 77/165 (46.67%), Query Frame = 1 Query: 277 GLRTKLHHYQLDGVLWMLQKETTID---AGQVSGGILADESCLGKIAQVLGLVVSSRHLQR----------------RGPTLVVCSTEKIRHWMRQVDVHMQSGRELSLISWEGPRRCKDASLLCVQDMIITDYPTFRADLRMHRRGRSLLS----GIKWERSVL 702 GL+ KL +Q+DGV WM++KET + A GGILAD+ LGK Q + L++S+ ++ +G TLVV I+ W +++ + L ++ GP R K A L D++IT Y ++ G L + W R++L Sbjct: 395 GLKVKLLPHQVDGVAWMIEKETGMHNKRAKLPKGGILADDMGLGKTVQSMALILSNPRPEKGVEPENKKNRIADSTGKG-TLVVAPLALIKQWEAEINTKVMKSHALKVLVHHGPSRTKSADKLKQYDVVITTYQVLASEHASCGDGPDGLKKGCFAVNWYRTML 558
BLAST of mRNA_C-australica_Contig_1024.3.2 vs. uniprot
Match: A0A6A6JHI5_9PLEO (Uncharacterized protein n=1 Tax=Westerdykella ornata TaxID=318751 RepID=A0A6A6JHI5_9PLEO) HSP 1 Score: 67.8 bits (164), Expect = 2.280e-9 Identity = 46/163 (28.22%), Postives = 75/163 (46.01%), Query Frame = 1 Query: 277 GLRTKLHHYQLDGVLWMLQKETTIDAGQV--SGGILADESCLGKIAQVLGLVVSSRHLQR---------------RGPTLVVCSTEKIRHWMRQVDVHMQSGRELSLISWEGPRRCKDASLLCVQDMIITDYPTFRADLRMHRRGRSLLS----GIKWERSVL 702 GL+ +L +Q+DGV WM++KET ++ GGILAD+ LGK Q + L++S+ ++ R TL+V I+ W +++ + L ++ GP R K L D++IT Y ++ G L G+ W R +L Sbjct: 456 GLKVRLLPHQVDGVAWMIEKETGAHMKKMPPKGGILADDMGLGKTIQSIALILSNPRPEKDVELENKKNKILPTVRKGTLIVAPLALIKQWESEINDKVLKSHSLKVLVHHGPNRTKSIEKLKSYDVVITTYQVLSSEHASCGEGPDGLKKGCFGVHWYRVIL 618 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1024.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1024.3.2 >prot_C-australica_Contig_1024.3.2 ID=prot_C-australica_Contig_1024.3.2|Name=mRNA_C-australica_Contig_1024.3.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=237bp MDKQPLPTALVAPYRQSEYLRRRVLDLGPSATSKASHTASHPAQGEEDLRback to top mRNA from alignment at C-australica_Contig_1024:5361..6760- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1024.3.2 ID=mRNA_C-australica_Contig_1024.3.2|Name=mRNA_C-australica_Contig_1024.3.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1400bp|location=Sequence derived from alignment at C-australica_Contig_1024:5361..6760- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1024:5361..6760- >mRNA_C-australica_Contig_1024.3.2 ID=mRNA_C-australica_Contig_1024.3.2|Name=mRNA_C-australica_Contig_1024.3.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=711bp|location=Sequence derived from alignment at C-australica_Contig_1024:5361..6760- (Chrysoparadoxa australica CS_1217)back to top |