mRNA_C-australica_Contig_10230.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: UPI000415D989 (hypothetical protein n=1 Tax=Oceanicaulis alexandrii TaxID=153233 RepID=UPI000415D989) HSP 1 Score: 332 bits (852), Expect = 1.500e-111 Identity = 173/269 (64.31%), Postives = 220/269 (81.78%), Query Frame = 1 Query: 1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807 MRISTQAASQ+ALMDLMRAQR+A+DARDQLA+GKKA DLKG+AN AET+++AR A+ R+E+F T+N R+ +RLE+QDLAY+E+S AAT+LR ALTT DG+ +M++V+E FD+ AA+N +F S+VF G+RTD+ P A T+ADLQAA PD SA+F+NA RQT I+E TID+N TASEV DLMAS ERIADFNAGPDGPFDG +T NQQAFL++E+AN+IAAF+TIN AM ENGS+Q ++E + H+ RSDYL +A E+AD Sbjct: 1 MRISTQAASQAALMDLMRAQREAYDARDQLASGKKAPDLKGYANTAETIISARAAQQRSESFATSNSRIMNRLEIQDLAYQELSQAATDLRTALTTNDGSFMMDKVQEVFDQASAALNMRFNGSYVFGGVRTDALPFTADTIADLQAAAPDVSAMFDNAPRRQTTMIEETITIDINSTASEVGTDLMASIERIADFNAGPDGPFDGQITENQQAFLETELANIIAAFDTINVAMAENGSRQKQVENATTGHEKRSDYLTIMVAGIEDAD 269
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: A0A5M6ZE63_9PROT (Flagellin n=1 Tax=Alkalicaulis satelles TaxID=2609175 RepID=A0A5M6ZE63_9PROT) HSP 1 Score: 332 bits (850), Expect = 3.030e-111 Identity = 171/269 (63.57%), Postives = 220/269 (81.78%), Query Frame = 1 Query: 1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807 MRISTQAA+QSALMDLMRAQR+AFDAR+Q++TG+KA DLKG+ N AE +++ R A+ R +++++ N RL +RL VQDLAYRE+S+AAT+LR LTT+DGT LMN+V+EAFDR V A+NT+F S VF G+RTD+ P+N TTL LQA + D F +A RQTA+ID+N TI+VNRTA+EV GDLM F R+ADFN GPDGPFDGP+ ++QQ+F+Q+EIAN I+AFE IN+AMGENG+KQAR+EAS+R H+ R DYL+ +AD EEAD Sbjct: 1 MRISTQAAAQSALMDLMRAQREAFDAREQVSTGRKAPDLKGYGNSAEVIISTRAAQTRVDSYVSANTRLENRLAVQDLAYRELSEAATDLRETLTTSDGTFLMNKVQEAFDRVVIALNTRFNGSHVFGGVRTDAQPVNITTLGQLQA-LGDPMDAFSSASRRQTAQIDDNLTIEVNRTAAEVAGDLMGVFRRLADFNDGPDGPFDGPMNSSQQSFIQTEIANAISAFERINEAMGENGAKQARVEASVRGHKAREDYLKRMLADLEEAD 268
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: A3UFN8_9PROT (Flagellin n=2 Tax=unclassified Oceanicaulis TaxID=2632123 RepID=A3UFN8_9PROT) HSP 1 Score: 330 bits (847), Expect = 8.640e-111 Identity = 172/269 (63.94%), Postives = 219/269 (81.41%), Query Frame = 1 Query: 1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807 MRISTQAASQ+AL DLMRAQR+A+DAR QLA+GKKA DLKG+AN AET++ A+ A+ R+E+F+ NER+ +RLE+QDLAY+E+S AAT+LR ALTT DG+ +M++V+E FDR AA+N +F SFVF G RTD+ P A T+ADLQAAVPD SA F+NA RQT +I+E TIDVN TASEV +LMAS ERIADFNAGPDGPFDG +T NQQAFL++E+AN+I+AF+TIN AM ENG++Q ++E S+ H+ RSDYL+ +A E+AD Sbjct: 1 MRISTQAASQAALSDLMRAQREAYDARQQLASGKKAPDLKGYANSAETIIAAKAAQKRSESFVGANERVLNRLEIQDLAYQELSTAATDLRTALTTNDGSFMMDKVQEVFDRASAALNMRFNGSFVFGGRRTDAVPFTADTIADLQAAVPDVSATFQNAADRQTTKIEETITIDVNATASEVGTELMASIERIADFNAGPDGPFDGQITENQQAFLETELANIISAFDTINVAMAENGARQKQLEGSITGHEKRSDYLEIMVAGIEDAD 269
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: UPI001EDD9DAF (hypothetical protein n=1 Tax=Shewanella sp. ER-Te-42B-Light TaxID=2872342 RepID=UPI001EDD9DAF) HSP 1 Score: 328 bits (842), Expect = 4.960e-110 Identity = 168/269 (62.45%), Postives = 219/269 (81.41%), Query Frame = 1 Query: 1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807 MRISTQAASQSALMDLMRAQR+AFDAR+QL+TG+KA DLKG+ N AE +++AR A+VR + +++ N RL +RLEVQDLAYRE+SD+ +ELR LTT+DGT LMN+V+E+FDR V A+NT+F S VF+G+RTD+ P+ +T+ LQA + D F+NA RQ+ +ID+N +DVN TASEV GDLM F R+ADFN GPDGPF+GP+TA QQAF+Q+EI NVIAAFE +N+AMGENG++QA++EAS+R H+ R+DYL +AD E+AD Sbjct: 1 MRISTQAASQSALMDLMRAQREAFDAREQLSTGRKAPDLKGYGNSAEAIISARSAQVRVDNYVSANTRLGNRLEVQDLAYRELSDSVSELRETLTTSDGTFLMNKVQESFDRVVIALNTRFNGSHVFAGVRTDAQPMTVSTIGQLQA-LGDPMDAFDNASRRQSTQIDDNLAVDVNATASEVAGDLMGVFRRLADFNDGPDGPFNGPMTAAQQAFIQTEITNVIAAFEHVNEAMGENGARQAKVEASVRGHEARADYLTRMLADLEDAD 268
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: A0A4S2GXN2_9PROT (Flagellin n=1 Tax=Marinicauda algicola TaxID=2029849 RepID=A0A4S2GXN2_9PROT) HSP 1 Score: 310 bits (795), Expect = 6.750e-103 Identity = 168/269 (62.45%), Postives = 211/269 (78.44%), Query Frame = 1 Query: 1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807 MRISTQAA+QSALMDLMRAQRD+FDAR+QLATGKKA DLKG+ +QAET+++ARGA R+E+F T +RL SRL+VQDLA REMSDA ELR +LTT DGT LM EVRE+F+R V A+NT+F S+VFSG RTD++ TLADLQAA P +++F N+ +QTA I+E T++V A + D+MA FERIADF+AGPDGPFDG VT QQAFLQ+EIAN IAAF+ IND M +NG+ Q R+E S+ + +R+DYL ++AD E+AD Sbjct: 1 MRISTQAAAQSALMDLMRAQRDSFDAREQLATGKKAPDLKGYGHQAETILSARGALERSESFTTAAKRLQSRLDVQDLALREMSDAVAELRTSLTTNDGTYLMTEVRESFERIVTALNTRFNGSYVFSGTRTDAAAFTGQTLADLQAA-PSIASLFGNSDRKQTAMIEEEVTVEVAPLAEDFAADVMAIFERIADFDAGPDGPFDGAVTPAQQAFLQTEIANAIAAFDEINDTMAKNGAMQERLEKSIEAQTERTDYLTLFLADLEDAD 268
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: A0A2U2BRX3_9PROT (Flagellin n=1 Tax=Marinicauda salina TaxID=2135793 RepID=A0A2U2BRX3_9PROT) HSP 1 Score: 291 bits (745), Expect = 2.670e-95 Identity = 154/269 (57.25%), Postives = 201/269 (74.72%), Query Frame = 1 Query: 1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807 MRISTQAA+QSAL+DLMRAQR++F+AR Q+ TGK A DLKG+ + +ET+ AR A+ R ++F+ NERL SRL++QDLA+RE+SDAA +LRVALTT D + LMNEV++ F+R A+NT+F SF+F+G R D+ P+NA ++ADLQAA PD AVFENA QT IDE ++ A +V +L A ER+ADF+AGPDGPFDG T QQ FLQ+EI NVIAAF+TIN MGENGS R+E ++ +HQ R+D+L I+D E+ D Sbjct: 1 MRISTQAANQSALLDLMRAQRESFEARQQVTTGKAAPDLKGYGHASETITAARSAQTRADSFVKANERLLSRLDIQDLAFRELSDAADQLRVALTTDDTSMLMNEVKDVFERAKNALNTRFQGSFLFAGTRIDTPPVNADSIADLQAAAPDVGAVFENADRAQTQLIDEGVNAEIGFLAQDVGEELFAVIERVADFDAGPDGPFDGRATPAQQNFLQTEIQNVIAAFDTINQKMGENGSLYRRVETAVDTHQKRADFLTTMISDIEDVD 269
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: A0A3T0EC85_9PROT (Flagellin n=1 Tax=Glycocaulis alkaliphilus TaxID=1434191 RepID=A0A3T0EC85_9PROT) HSP 1 Score: 289 bits (739), Expect = 2.100e-94 Identity = 158/269 (58.74%), Postives = 200/269 (74.35%), Query Frame = 1 Query: 1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807 MRISTQAASQSALMDLMRAQR +++ Q++TG KA DLKG+ N+ ET++ ARGA R++ F+ ++RL+SRL+VQDLA EMSDA +LR+ALTT DGT LMN+V+ AF R AA+NT+F SF+FSG RTD+ P A T+A +Q A D + +F N+ QT RI+ENTT++ A E+ DLMA F RIADFNAGPDGPFDG VT QQ FL +EI NVIAAFE I+ A+G+NGS QAR+E + +S+ RSDYL+ IA EE D Sbjct: 1 MRISTQAASQSALMDLMRAQRQLYESGQQVSTGLKAPDLKGYGNEVETILFARGALARSDNFVEASKRLASRLDVQDLALNEMSDAVQDLRLALTTNDGTFLMNDVQAAFSRFSAALNTQFNGSFIFSGTRTDAVPFTADTIAQVQGAA-DIADLFHNSSKSQTGRIEENTTVETGFLADELAADLMAIFARIADFNAGPDGPFDGTVTTVQQEFLSTEIGNVIAAFENISSAIGKNGSLQARLETAQQSNAQRSDYLKTMIAGMEEVD 268
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: A0A3D5ZXH4_9PROT (Flagellin n=2 Tax=Maricaulaceae TaxID=2800061 RepID=A0A3D5ZXH4_9PROT) HSP 1 Score: 283 bits (723), Expect = 6.150e-92 Identity = 153/269 (56.88%), Postives = 200/269 (74.35%), Query Frame = 1 Query: 1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807 MR+STQAASQSALMDLMRAQR+ +++ Q++TG KA DLKG+ NQAET++ ARGA R++ F+ ++RL+SRL+VQDLA EMS+A +LR+ALTT DG+ LM +V+ AF R A+NT+F SF+F G RTD+ P A T+AD+Q A + + +F+N+ QT RI+ENTT++ AS++ DLM FERIADFNAGPDGPFDG VT QQ FL +EI+NVIAAFE I+ A+ NGS QAR+E + ++ RSDYL IA EEAD Sbjct: 4 MRVSTQAASQSALMDLMRAQRELYESGQQISTGLKAPDLKGYGNQAETILFARGALARSDNFVEASKRLASRLDVQDLALNEMSEAVQDLRLALTTNDGSFLMADVQAAFSRFTGALNTQFNGSFIFGGTRTDTPPFTANTIADVQGAA-NIADLFQNSAQAQTGRIEENTTVETGFLASDLASDLMGIFERIADFNAGPDGPFDGTVTEAQQNFLSTEISNVIAAFENISTAVARNGSMQARLETAQANNAQRSDYLTTMIAGMEEAD 271
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: A0A4S2HD97_9PROT (Flagellin n=1 Tax=Marinicauda pacifica TaxID=1133559 RepID=A0A4S2HD97_9PROT) HSP 1 Score: 276 bits (707), Expect = 1.480e-89 Identity = 152/269 (56.51%), Postives = 194/269 (72.12%), Query Frame = 1 Query: 1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807 MRISTQAASQSALMDLMRAQRDAF+AR+Q +TGK+A DLKG+ ++AET++ ARGA R E+F + +RL +RL +Q+LA E+S A +LR ALTT D T +M EV E+FDR AA+NTK S++F G RTD+ P NA +LADLQAA VF+N+ +QT IDE+TT+DV AS+ D+M FERIADF+AGP+GPFDGPV A QQAFL++EIAN + AFE IN NG+ Q RIE + + DR +YL ++ D E D Sbjct: 1 MRISTQAASQSALMDLMRAQRDAFEAREQYSTGKRAPDLKGYGHEAETILAARGALERNESFNSAAKRLDNRLSIQNLALEEISGAVKDLREALTTGDATYMMTEVEESFDRIRAALNTKSNGSYIFGGTRTDTPPFNANSLADLQAAAA-IGDVFDNSDRKQTMLIDEDTTVDVGPLASDFATDIMRVFERIADFDAGPNGPFDGPVDAAQQAFLRTEIANTVQAFEQINSETARNGAMQQRIEGEITAQGDRKNYLTQFVEDVEGVD 268
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: A0A0P7VXZ9_9PROT (Flagellin n=1 Tax=Oceanicaulis sp. HLUCCA04 TaxID=1666904 RepID=A0A0P7VXZ9_9PROT) HSP 1 Score: 275 bits (704), Expect = 4.210e-89 Identity = 151/269 (56.13%), Postives = 199/269 (73.98%), Query Frame = 1 Query: 1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807 MRISTQAASQSALMDLMRAQR+ +++ Q++TG KA DLKG+ N+AET++ ARGA R++ F+ ++RL+SRLEVQDLA EMSDA ELR+ALTT DGT LM ++ AF R +A+NT+F S++F G RTD+ P +++D+Q A D + +F+NA++ QT R++ENTT++ ASE+ +LM FERIADF+AGPDGPFDG VT QQ +L EIANVI FE I+ A+G NGS Q+R+E + S+ RSDYL IA EEAD Sbjct: 1 MRISTQAASQSALMDLMRAQRELYESGQQVSTGLKAPDLKGYGNEAETILFARGALARSDNFVDASKRLASRLEVQDLALTEMSDAVQELRMALTTNDGTFLMADIEAAFGRFSSALNTQFNGSYIFGGTRTDAEPFTGKSISDVQGAA-DIADLFQNAENAQTGRVEENTTVETGFLASELGTELMEIFERIADFDAGPDGPFDGTVTEAQQDYLSGEIANVINVFEDISVALGANGSLQSRLETAQLSNAQRSDYLTEMIAGLEEAD 268 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10230.1.1 >prot_C-australica_Contig_10230.1.1 ID=prot_C-australica_Contig_10230.1.1|Name=mRNA_C-australica_Contig_10230.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=269bp MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMback to top mRNA from alignment at C-australica_Contig_10230:24..830+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10230.1.1 ID=mRNA_C-australica_Contig_10230.1.1|Name=mRNA_C-australica_Contig_10230.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=807bp|location=Sequence derived from alignment at C-australica_Contig_10230:24..830+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10230:24..830+ >mRNA_C-australica_Contig_10230.1.1 ID=mRNA_C-australica_Contig_10230.1.1|Name=mRNA_C-australica_Contig_10230.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=807bp|location=Sequence derived from alignment at C-australica_Contig_10230:24..830+ (Chrysoparadoxa australica CS_1217)back to top |