mRNA_C-australica_Contig_10215.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10215.1.1 vs. uniprot
Match: UPI000368B8D4 (amidohydrolase n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI000368B8D4) HSP 1 Score: 245 bits (626), Expect = 2.710e-76 Identity = 120/125 (96.00%), Postives = 121/125 (96.80%), Query Frame = 1 Query: 67 MKSDRIIITNAKVYTLAWDDPALDGTPAKNAPFQNGKWTADAEAIVIEDNEILFVGTNSEALSYKHEHTSIVDVQGSTVIPGLVDSHAHPYYFGEDLGKIDLTGIRDKPVLLNTLKAKAGDVAEG 441 MKS+RIIITNAKVYTLAWDDPALDGTPA NAPFQNGKW ADAEAIVIEDNEILFVGTNSEALSYKHEHTSIVDVQGSTVIPGLVDSHAHPYYFGEDLGKIDLTGI DK VLLNTLKAKAGDVAEG Sbjct: 1 MKSERIIITNAKVYTLAWDDPALDGTPANNAPFQNGKWIADAEAIVIEDNEILFVGTNSEALSYKHEHTSIVDVQGSTVIPGLVDSHAHPYYFGEDLGKIDLTGISDKTVLLNTLKAKAGDVAEG 125
BLAST of mRNA_C-australica_Contig_10215.1.1 vs. uniprot
Match: A0A6A8Q1E4_9BACT (Amidohydrolase n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q1E4_9BACT) HSP 1 Score: 173 bits (438), Expect = 2.250e-48 Identity = 82/142 (57.75%), Postives = 109/142 (76.76%), Query Frame = 1 Query: 7 SNTFRLSLLLLSFLIIT--CTQMKSDRIIITNAKVYTLAWDDPALDGTPAKNAPFQNGKWTADAEAIVIEDNEILFVGTNSEALSYKHEHTSIVDVQGSTVIPGLVDSHAHPYYFGEDLGKIDLTGIRDKPVLLNTLKAKAG 426 S+ R +L L F+++T CT+ +S R+I+TN KVYTL+W +PA DGTP+ +AP+++G W+ DAEA+V+E N IL+VG+ EAL YK+ + +VD +G VIPGLVDSHAHPYYFGEDLGKI+LTGI+ K LL LK KAG Sbjct: 7 SSLLRSCILCLVFILMTLGCTKTESKRLIVTNGKVYTLSWANPAQDGTPSSDAPYEDGVWSPDAEAVVVEGNRILYVGSEQEALEYKNNMSEVVDARGGMVIPGLVDSHAHPYYFGEDLGKIELTGIKTKTKLLQALKNKAG 148
BLAST of mRNA_C-australica_Contig_10215.1.1 vs. uniprot
Match: A0A523IDJ1_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Caldithrix sp. TaxID=1962856 RepID=A0A523IDJ1_9BACT) HSP 1 Score: 124 bits (312), Expect = 9.520e-34 Identity = 59/136 (43.38%), Postives = 88/136 (64.71%), Query Frame = 1 Query: 34 LLSFLIITCTQMKSDRIIITNAKVYTLAWDDPALDGTPAKNAPFQNGKWTADAEAIVIEDNEILFVGTNSEALSYKHEHTSIVDVQGSTVIPGLVDSHAHPYYFGEDLGKIDLTGIRDKPVLLNTLKAKAGDVAEG 441 L+SFL +CT +I+TN +VYT WDDPA DGTPA +APF+ G W DA A+ + +I+FVG+N +A ++ +T I+DV+G+T++PGLVDSH H G +L ++DLT + + + + A VA+G Sbjct: 16 LVSFLT-SCTGSNEADLIVTNGRVYTYTWDDPAADGTPAASAPFKEGVWHPDAAAVATRNGKIIFVGSNQDAEKFRGANTRIIDVRGATILPGLVDSHTHVEGIGANLERVDLTSAKTEEQAVKLIAAHLTHVAKG 150
BLAST of mRNA_C-australica_Contig_10215.1.1 vs. uniprot
Match: A0A523HPD6_9BACT (Amidohydrolase n=1 Tax=Caldithrix sp. TaxID=1962856 RepID=A0A523HPD6_9BACT) HSP 1 Score: 127 bits (319), Expect = 1.950e-31 Identity = 60/136 (44.12%), Postives = 90/136 (66.18%), Query Frame = 1 Query: 34 LLSFLIITCTQMKSDRIIITNAKVYTLAWDDPALDGTPAKNAPFQNGKWTADAEAIVIEDNEILFVGTNSEALSYKHEHTSIVDVQGSTVIPGLVDSHAHPYYFGEDLGKIDLTGIRDKPVLLNTLKAKAGDVAEG 441 L+SFL +CT +I+TN +VYT WDDPA DGTPA +APF+ G W DAEA+ ++ +I+FVG+N +A ++ +T I+DV+G+T++PGLVDSH H G +L ++DLT + + + + A VA+G Sbjct: 28 LVSFLT-SCTGSNEADLIVTNGRVYTYTWDDPAADGTPASSAPFKEGVWHPDAEAVATKNGKIVFVGSNQDAEKFRGANTRIIDVRGATILPGLVDSHTHVEGIGANLERVDLTSAKTEEQAVKLIAAHLTHVAKG 162
BLAST of mRNA_C-australica_Contig_10215.1.1 vs. uniprot
Match: A0A2T4WXD9_9BACT (Amidohydro_3 domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2T4WXD9_9BACT) HSP 1 Score: 122 bits (305), Expect = 1.520e-29 Identity = 56/120 (46.67%), Postives = 82/120 (68.33%), Query Frame = 1 Query: 82 IIITNAKVYTLAWDDPALDGTPAKNAPFQNGKWTADAEAIVIEDNEILFVGTNSEALSYKHEHTSIVDVQGSTVIPGLVDSHAHPYYFGEDLGKIDLTGIRDKPVLLNTLKAKAGDVAEG 441 I+ITNA+VYTL+WDDP+LDG PA+NAP++NG W DAEAI I+D I FVGTN E +Y E+T I+D + V+PGL++SH H GE ++L + K ++ + + ++ ++ EG Sbjct: 27 IVITNARVYTLSWDDPSLDGIPAQNAPYENGVWQPDAEAIAIKDRLIQFVGTNDEIQNYIGENTKIIDANNALVVPGLIESHGHVQEIGEKEEAVNLLNLSAKDII-DVIYKRSLEIPEG 145
BLAST of mRNA_C-australica_Contig_10215.1.1 vs. uniprot
Match: A0A2E3QV55_9BACT (Amidohydro_3 domain-containing protein n=2 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A2E3QV55_9BACT) HSP 1 Score: 120 bits (302), Expect = 3.970e-29 Identity = 54/128 (42.19%), Postives = 84/128 (65.62%), Query Frame = 1 Query: 58 CTQMKSDRIIITNAKVYTLAWDDPALDGTPAKNAPFQNGKWTADAEAIVIEDNEILFVGTNSEALSYKHEHTSIVDVQGSTVIPGLVDSHAHPYYFGEDLGKIDLTGIRDKPVLLNTLKAKAGDVAEG 441 C +I+ +A+VYTLAW DP +G PA +APF +G+W+ DA A+V+E + I FVG+++EAL+ + T +VD+ G+TV+PGL++SH H + GE +I L G+R + + L+A A D +G Sbjct: 19 CATSAGPSLILHDARVYTLAWGDPNAEGRPAPDAPFADGQWSPDATAVVVEGDRIAFVGSDAEALAMRGRDTRVVDLDGATVVPGLIESHGHLHEIGEKAEEISLVGVRTEADIAGRLRAAATDRPDG 146
BLAST of mRNA_C-australica_Contig_10215.1.1 vs. uniprot
Match: A0A849GHH3_9GAMM (Amidohydrolase family protein (Fragment) n=1 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A849GHH3_9GAMM) HSP 1 Score: 113 bits (283), Expect = 6.380e-29 Identity = 52/127 (40.94%), Postives = 82/127 (64.57%), Query Frame = 1 Query: 61 TQMKSDRIIITNAKVYTLAWDDPALDGTPAKNAPFQNGKWTADAEAIVIEDNEILFVGTNSEALSYKHEHTSIVDVQGSTVIPGLVDSHAHPYYFGEDLGKIDLTGIRDKPVLLNTLKAKAGDVAEG 441 +Q + +I+TNA+VYTL WD+PA DG+ +AP+ W DAEAI I D +ILFVG+N A+++ + + +VD+ G+TV+PGLVDSH H + G L +++L G+ + + + +A V +G Sbjct: 24 SQTEGASLILTNARVYTLTWDEPATDGSVQPDAPYDENGWHPDAEAIAIRDGDILFVGSNDGAMAFNAKTSRVVDLAGATVLPGLVDSHTHVFGLGALLDQVNLIGVATEEEDVELIVERAKSVPKG 150
BLAST of mRNA_C-australica_Contig_10215.1.1 vs. uniprot
Match: A0A0S7ZTQ3_9BACT (Amidohydro_3 domain-containing protein n=1 Tax=Gemmatimonas sp. SG8_17 TaxID=1703355 RepID=A0A0S7ZTQ3_9BACT) HSP 1 Score: 120 bits (300), Expect = 7.380e-29 Identity = 52/128 (40.62%), Postives = 84/128 (65.62%), Query Frame = 1 Query: 58 CTQMKSDRIIITNAKVYTLAWDDPALDGTPAKNAPFQNGKWTADAEAIVIEDNEILFVGTNSEALSYKHEHTSIVDVQGSTVIPGLVDSHAHPYYFGEDLGKIDLTGIRDKPVLLNTLKAKAGDVAEG 441 C + + +++ N +VYTL WD+PA DGTPA NAP W DA A+ +++ I+FVG ++EA +Y+ +HT ++D+ G+TVIPGLVDSH H G +L +++L G+ + +++ + +A V EG Sbjct: 10 CDRATTADLLLLNGRVYTLTWDEPARDGTPAANAPTDELGWHPDAAAVAVKNGTIIFVGRDTEAQTYRGDHTEVIDLNGATVIPGLVDSHVHIKELGANLERVNLAGVATEREIVDLIANRAAAVPEG 137
BLAST of mRNA_C-australica_Contig_10215.1.1 vs. uniprot
Match: A0A523GLS3_9BACT (Amidohydrolase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A523GLS3_9BACT) HSP 1 Score: 117 bits (292), Expect = 1.020e-27 Identity = 55/145 (37.93%), Postives = 90/145 (62.07%), Query Frame = 1 Query: 13 TFRLSLLLLSFLIITCTQ--MKSDRIIITNAKVYTLAWDDPALDGTPAKNAPFQNGKWTADAEAIVIEDNEILFVGTNSEALSYKHEHTSIVDVQGSTVIPGLVDSHAHPYYFGEDLGKIDLTGIRDKPVLLNTLKAKAGDVAEG 441 T R +L++ F++ C + +++TN VY+L+W DPA DG PA +APF++G W D EAI I + I++VGTN +AL+ E+ ++D+ G+TVIPG ++SH H + GE ++DL I D+ +++ + +A V G Sbjct: 2 TTRFALIVFIFILAACNNAPVGEAELVLTNGFVYSLSWGDPAGDGMPAIDAPFEDGIWYPDGEAIYISGDRIMYVGTNEDALAQARENVQVIDLHGATVIPGAIESHGHVHELGEHHEQLDLLDINDRSEIIDMVVERAASVPAG 146
BLAST of mRNA_C-australica_Contig_10215.1.1 vs. uniprot
Match: A0A4V5LQX6_9FLAO (Amidohydro_3 domain-containing protein n=1 Tax=Pontimicrobium aquaticum TaxID=2565367 RepID=A0A4V5LQX6_9FLAO) HSP 1 Score: 115 bits (287), Expect = 4.660e-27 Identity = 57/144 (39.58%), Postives = 92/144 (63.89%), Query Frame = 1 Query: 28 LLLLSFLIITCTQMKSDRI---IITNAKVYTLAWDDPALDGTPAKNAPFQNGKWTADAEAIVIEDNEILFVGTNSEALSYKHEHTSIVDVQGSTVIPGLVDSHAHPYYFGE---DLGKIDLTGIRDKPVLLNTLKAKAGDVAEG 441 L++++ LI++C+ I ++TNA+VYTL+WDDP+LDGTPA+NA +N W DAEAI I++ I FVGT + +Y E+T ++D + + ++PGL++SH H GE D+ IDL+ +++ + ++ DV EG Sbjct: 5 LIIITVLIVSCSSNHKKEIADVVVTNARVYTLSWDDPSLDGTPAQNASIKNSVWQPDAEAIAIKNGLIQFVGTTKDVQNYIGENTEVIDAKNAFIVPGLIESHGHVQEIGEKNEDVNLIDLSAQE----IIDAIYKRSQDVPEG 144 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10215.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10215.1.1 >prot_C-australica_Contig_10215.1.1 ID=prot_C-australica_Contig_10215.1.1|Name=mRNA_C-australica_Contig_10215.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=147bp MFSNTFRLSLLLLSFLIITCTQMKSDRIIITNAKVYTLAWDDPALDGTPAback to top mRNA from alignment at C-australica_Contig_10215:5..445- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10215.1.1 ID=mRNA_C-australica_Contig_10215.1.1|Name=mRNA_C-australica_Contig_10215.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=441bp|location=Sequence derived from alignment at C-australica_Contig_10215:5..445- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10215:5..445- >mRNA_C-australica_Contig_10215.1.1 ID=mRNA_C-australica_Contig_10215.1.1|Name=mRNA_C-australica_Contig_10215.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=441bp|location=Sequence derived from alignment at C-australica_Contig_10215:5..445- (Chrysoparadoxa australica CS_1217)back to top |