mRNA_C-australica_Contig_1021.7.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_1021.7.1 vs. uniprot
Match: A0A6G0WI70_9STRA (Protein kintoun n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WI70_9STRA) HSP 1 Score: 135 bits (339), Expect = 2.210e-29 Identity = 141/533 (26.45%), Postives = 231/533 (43.34%), Query Frame = 2 Query: 59 QDSKGQDTTTFDVCVHPEALLKAKASDNFKDFLVTTAMEQVEKQYAGASSGSEIAVSRTFHILKGVSYKSGDPATMLMALESSAQGLTGTGAGKTPKQSTQPAGNAGGEIPAKPQGKSLPQKQQXXXXXXXXXXGVKEVGEVSRVAQVGGGQEAAAKVKLAGATMQPRESPGKPATPAKQRFTITERGVFDMADHMHEGSNQVQQAFRPKELVIRIMLPAGTKNAAGLDLDVAERRLLLGTPKEQRYVDIKLPYPVHEKQGAAKFDKASAVLTVTVPVQPPPRLPSTAALDATAKELVEATEPADRAEEGRECPAWRRDEPE------PAPNSRWVTEVPQGETFSF-------------EPPPA----PPVEVGQPKEGKG-----AGMEEDELVVQGNYTACEC-FAGPRPGYVFKLGDSGLGYYKDAVAEEE---------VEEEAEAAVQHREPRFEWRENERSVSVIVDVENVPQESIKACWGKQSLDLAFSALEEGLAYRLQLALAGEILPDSCKCDAATENICVLM 1543 QD GQ TFDVC HP+ L + S F LV T+++ V+K +E V+R +HILKGV YKSG+P TM ++ T + + P +T + P + S+P + + A Q R P K I ERG FD+ADH+ ++ FRP+ELV+++ P + +AAG+DLDV+ + + T K ++KLPYPV E +G AKFDKAS L VT+PV+P P P + +E ++ TEP + E +E E E P +SRW+ T F +PPP PP V + A ++ + + T+ F + + F + ++ + + +A +EE++ + + EP E+ ++S+++DV ++ E+IK+ + S +AFS ++E + + + P+ CK + A +N+ V++ Sbjct: 143 QDKGGQAVMTFDVCHHPQTLSRGMESAAFLKMLVNTSIDGVDKALLQLDPSAE-KVAREYHILKGVVYKSGNPITMCISKPRETLASNATESQQPPSTTT--------KKPLIEEITSMPTEPK--------------------------------------AAEQER-----PPVLRKISHQIVERGRFDLADHVE---SREAAPFRPRELVVKMPFPTHS-SAAGIDLDVSSSEIKV-TAKGYEPFELKLPYPVIESKGKAKFDKASKTLVVTLPVEPLPVPPPSTKCP---QESLQLTEPDVQDEAKKEEDVETVAETEATKAEAPVDHSRWIERQDNQATDEFVAFREYALMRVHDKPPPRSFEEPPFTVQETATNLSYIIQVASIDPESISTSETDTSIMFEFQDGKKWFRFGIENASVAEWTYDLATNNMAIICRKCLIEEKSHSTL---EPPVRIHEDTNAISILIDVASIDPETIKSAFTDHSCTIAFSTMQEKNDFEWTKTFSQSLAPNECKVECAQDNLLVIL 612
BLAST of mRNA_C-australica_Contig_1021.7.1 vs. uniprot
Match: A0A1V9Z6W0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z6W0_9STRA) HSP 1 Score: 124 bits (311), Expect = 4.400e-26 Identity = 95/278 (34.17%), Postives = 143/278 (51.44%), Query Frame = 2 Query: 59 QDSKGQDTTTFDVCVHPEALLKAKASDNFKDFLVTTAMEQVEKQYAGASSGSEIAVSRTFHILKGVSYKSGDPATMLMALESSAQGLTGTGAGKTPKQSTQPAGNAGGEIPAKPQGKSLPQKQQXXXXXXXXXXGVKEVGEVSRVAQVGGGQEAAAKVKLAGATMQPRESPGKPATPAKQRFTITERGVFDMADHMHEGSNQVQQAFRPKELVIRIMLPAGTKNAAGLDLDVAERRLLLGTPKEQRYVDIKLPYPVHEKQGAAKFDKASAVLTVTVPV 892 QD G TFDVC HP+ L +AK S F LV T ++ V+ + +E VSR +HILKG++YKSGDP TM++ + + + + PK + +P +KP ++P+K+ V Q + K A A+M+ KP F I +RG FD+ADHM G ++ FRP+EL+++I P T +A+G+DLDV+ +++ + K+ I LP+PV E +G+AKFDKA+ L VT+PV Sbjct: 118 QDKGGLAVMTFDVCYHPQTLTQAKQSAAFLKMLVNTTLDGVDLALSKIEP-NEAKVSREYHILKGIAYKSGDPITMVITTSKLNESSSSSKPSQPPKATAKPD--------SKPA--TIPKKEP--------------------VPQASKESKTKCTNKAADASMK------KPTI----SFQIVQRGQFDIADHMENGEKKL---FRPRELLVKIDFPNQT-SASGIDLDVSSKQVKVAA-KDYSPCCIDLPFPVVEAKGSAKFDKATRKLIVTLPV 349
BLAST of mRNA_C-australica_Contig_1021.7.1 vs. uniprot
Match: A0A329SGH6_9STRA (Protein kintoun n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SGH6_9STRA) HSP 1 Score: 121 bits (303), Expect = 5.220e-25 Identity = 89/290 (30.69%), Postives = 148/290 (51.03%), Query Frame = 2 Query: 62 DSKGQDTTTFDVCVHPEALLKAKASDNFKDFLVTTAMEQVEKQYAGASSGSEIAVSRTFHILKGVSYKSGDPATMLMALESSAQGLTGTGAGKTPKQSTQPAGNAGGEIPAKPQGKSLPQ-KQQXXXXXXXXXXGVKEVGEVSRVAQVGGGQEAAAKVK-LAGATMQPRESPGKPATPAKQRFTITERGVFDMADHMHEG--SNQVQQAFRPKELVIRIMLPAGTKNAAGLDLDVAER--RLLLGTPKEQRY--VDIKLPYPVHEKQGAAKFDKASAVLTVTVPVQPPPR 907 D G + FDVC HP + + ++++ +++T ++ VE + + ++R +H+LKGV YKSGDP TM + E A KT K++ + A Q KS + K + G + +S++ QV G +++++ +K ++ ++ + P K K + RG F++ HM N + +RPKELV+ I P + +A GLDLDV+E+ RL G Y +++ LP+PV E +G+AKFD+ + L VT+PVQPPP+ Sbjct: 163 DKGGANAPAFDVCFHPRVIEFSMTREDYRHMVISTCLDAVEPIMRESRHKPDALLARNYHVLKGVLYKSGDPVTMCLRKEHEAPESV-----KTKKKTA---------VQAVKQTKSAAEDKNRPPLETIKRVEGKADKSVLSQLTQVEGAEQSSSLMKEVSSVKLEQSDKPKK----KKMEHQLIYRGRFELLHHMQADPDKNVPEDRYRPKELVVEINFPLSS-SAKGLDLDVSEKMLRLSAGPSVSGNYEPLELSLPFPVIEDKGSAKFDRKNHKLIVTLPVQPPPK 433
BLAST of mRNA_C-australica_Contig_1021.7.1 vs. uniprot
Match: A0A835YSW6_9STRA (Pre-RNA processing PIH1/Nop17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSW6_9STRA) HSP 1 Score: 119 bits (298), Expect = 3.670e-24 Identity = 123/446 (27.58%), Postives = 178/446 (39.91%), Query Frame = 2 Query: 602 FTITERGVFDMADHMHEGSNQVQQAFRPKELVIRIMLPAGTKNAAGLDLDVAERRLLLGTPKEQRYV---------------------DIKLPYPVHEKQGAAKFDKASAVLTVTVPVQPPPR-------------------------LPSTAALDATAKEL-VEATEPADRAEEGRECPAWRRDEPEPAPNSRWVTEVPQGETFSFEPPPAPPVEVGQPKEGKG--------------------------AGMEEDELVVQGNYTACECFAGPRPGYVFKLGDSGLGYYKDAVAEEEVEEEA------------------------------------------EAAVQHREPRFEWRENERSVSVIVDVENVPQESIKACWGKQSLDLAFSA----LEEGLAYRLQLALAGEILPDSCKCDAATENICVLMYKKERRVWGQLVE 1582 +T+TERG F++++H S V RP+ELV+RI +PA K +A L+LDV +R + L K + + D++LPYPV E +G+AK DKA +LTVT+PV P LP A L ATA E+ ++ ++ D + + + D+P P +SRW+ GE F FE PPA AG D G + A + G +PGY F+ G G GYY DA + A EAA R P F++RENE + S+I+ V +V ++ +A W + D+ A RL L L G+I P + D AT+N+ +++YK WG L E Sbjct: 513 YTLTERGEFELSNHTM--SRDVPSR-RPRELVLRITIPASVKPSA-LELDVGQRAVRLNNGKTGKLLLXXXXXXXXXXXXXXXXXXXLDLRLPYPVLENEGSAKVDKARNLLTVTMPVVPXXXXXXXXXXXXXXXXXXXXXXXXAHEALPPEAPL-ATAPEVQLQVSDGGDGSGDSAQRKERAADDPAPPDHSRWLQAAAPGEKFKFEVPPAAAAAAAAXXXXXXXXXLAXXXXAAAGTAVGLTSNLDLPTAGALSDGAAESGPFIASPAWRGAKPGYAFRRGKHGQGYYVDAHQQAPGVAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEAAPAAR-PPFDFRENELTASIILQVPDVDADTFEARWTARRGDITARTGGGXXXXXXAVRLSLRLRGDIDPARSRHDVATKNVAIVLYKARPGYWGGLEE 952
BLAST of mRNA_C-australica_Contig_1021.7.1 vs. uniprot
Match: A0A662Y8A6_9STRA (Protein kintoun n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y8A6_9STRA) HSP 1 Score: 118 bits (295), Expect = 5.440e-24 Identity = 87/287 (30.31%), Postives = 142/287 (49.48%), Query Frame = 2 Query: 62 DSKGQDTTTFDVCVHPEALLKAKASDNFKDFLVTTAMEQVEKQYAGASSGSEIAVSRTFHILKGVSYKSGDPATMLMALESSAQGLTGTGAGKTPKQSTQP-AGNAGGEIPAKPQGKSLPQKQQXXXXXXXXXXGVKEVGEVSRVAQVGGGQEAAAKVKLAGATMQPRESPGKPATPAKQRFTITERGVFDMADHMHEGSNQV--QQAFRPKELVIRIMLPAGTKNAAGLDLDVAERRLLLGT----PKEQRYVDIKLPYPVHEKQGAAKFDKASAVLTVTVPVQPP 901 D G +TFD C HP L A + +++ +V+T ++ VE + + +SR +H+LKGV YKSGDP TM + E + T K + Q A N +K + L +K ++ ++++ V +A + ++ ++ P + K T K + + RG F++ HM ++ + +RPKELV+ + P + +A GLDLDV+ER L L P + +D+ LP+PV E +G+AKFD+ + L VT+PVQPP Sbjct: 172 DKGGVSISTFDACFHPRTLEFAASRADYRHMVVSTCLDAVEPPLRESRRKPKAQLSRDYHVLKGVLYKSGDPVTMCLRKEREGSEPVQSEPKATEKATAQAKASNPPATSKSKEKITVLNEKASALVPRESDRLHPEDKSVLNQLTHVEQVDDAPSLLQEVSSSKLPPKPSDK--TTKKMEYQLIYRGRFELLHHMQADPEKLVPEDRYRPKELVVEVSFPLSS-SAKGLDLDVSERALRLSAGPKVPGDYEPLDLALPFPVIEDKGSAKFDRKNHKLVVTLPVQPP 455
BLAST of mRNA_C-australica_Contig_1021.7.1 vs. uniprot
Match: A0A067BY01_SAPPC (Protein kintoun n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BY01_SAPPC) HSP 1 Score: 114 bits (285), Expect = 8.730e-23 Identity = 105/297 (35.35%), Postives = 154/297 (51.85%), Query Frame = 2 Query: 62 DSKGQDTTTFDVCVHPEALLKAKASDNFKDFLVTTAMEQVEKQYAGASSGSEIAVSRTFHILKGVSYKSGDPATMLMAL-ESSAQGLTGTGAGKTPKQSTQPAGNAGGEIPAKPQGKSLPQKQQXXXXXXXXXXGVKEVGEVSRVAQVGGGQEAAAKVKLAGATMQPRESPGKPATPAKQRFTITERGVFDMADHMHEGSNQVQQAFRPKELVIRIMLPAGTKNAAGLDLDVAERRLLLGTPKEQRYVDIKLPYPVHEKQGAAKFDKASAVLTVTVPVQPP-PRLPSTAALDATAKE 946 D GQ TFDVC HP+ L + + S F L+ TA++ V+ + ++ ++ VSR +HILKGVSYK+G P TM ++ ++S++ T + A + P K + + P XXXXXXXXXX V KPA F I +RG FDMADHM G ++ FRP+ELV+++ LP T +AAG+DLDV+ ++ + + K + I LP+PV E +G AKFDKA+ L VT+PV P PR + +++T+K+ Sbjct: 146 DKGGQAVMTFDVCYHPQTLARGRDSAAFLKMLIGTALDGVDLALS-KTNPNDGQVSRDYHILKGVSYKTGSPITMCISTPKTSSESATSSSAXXXXXPAAVPTAKXXXTTSVKAKPNTKPSXXXXXXXXXXXXXXXXXXXXVV----------------------------AKPAIV----FQIVQRGQFDMADHMENGEKKL---FRPRELVLKMDLPTHT-SAAGIDLDVSATQVKVES-KAYAPLCIDLPFPVVEAKGVAKFDKATKKLIVTLPVVPEAPRPTAPTRVESTSKD 404
BLAST of mRNA_C-australica_Contig_1021.7.1 vs. uniprot
Match: A0A024TPK8_9STRA (Protein kintoun n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TPK8_9STRA) HSP 1 Score: 113 bits (282), Expect = 2.200e-22 Identity = 99/280 (35.36%), Postives = 137/280 (48.93%), Query Frame = 2 Query: 62 DSKGQDTTTFDVCVHPEALLKAKASDNFKDFLVTTAMEQVEKQYAGASSGSEIAVSRTFHILKGVSYKSGDPATMLMALESSAQGLTGTGAGKTPKQSTQPAGNAGGEIPAKPQGKSLPQKQQXXXXXXXXXXGVKEVGEVSRVAQVGGGQEAAAKVKLAGATMQPRESPGKPATPAKQRFTITERGVFDMADHMHEGSNQVQQAFRPKELVIRIMLPAGTKNAAGLDLDVAERRLLLGTPKEQRYVDIKLPYPVHEKQGAAKFDKASAVLTVTVPVQPP 901 D GQ T+DVC HP +L+A S F L+ TA++ V+K Y V R +H+LKGVSYKSG P TM LT P + QP A E Q K P+ XXXXXX G + + +L+ +P T A + IT RG FD+ADH+ N+ +AFRP++LV+++ LP+ +AAG+DLDV+ + + T + +LP+PV E +G AKFDKA+ L VT+PV P Sbjct: 147 DKGGQSIATYDVCYHPRTVLQAMQSAAFMKMLINTALDGVDKVYENIDPDPS-KVERDYHVLKGVSYKSGTPVTMC---------LTTPKPTTDPSRPKQPTRRASLEPAVVAQAK--PESASPXXXXXXEPLGSSPLIQ-----------------ELSXXXXXXXSNPRPLPTIA---YRITHRGQFDLADHI---DNREAKAFRPRDLVVKMALPSHA-SAAGIDLDVSSTAVRV-TAAGYAPLAFELPFPVVEAKGKAKFDKATKTLVVTLPVVEP 389
BLAST of mRNA_C-australica_Contig_1021.7.1 vs. uniprot
Match: A0A8J2T226_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T226_9STRA) HSP 1 Score: 112 bits (280), Expect = 4.090e-22 Identity = 143/581 (24.61%), Postives = 231/581 (39.76%), Query Frame = 2 Query: 59 QDSKGQDTTTFDVCVHPEALLKAKASDNFKDFLVTTAMEQVEKQYAGASSGSEIAVSRTFHILKGVSYKSGDPATMLMALESSAQGLTGTGAGKTPKQSTQPAG-----NAGGEIPAKPQGKSLPQKQQXXXXXXXXXXGVKEVGEVSRVAQVGGGQEAAAKVKLAGATMQPRESPG---KPATPAKQRFTITERGVFDMADHMHEGSNQVQQAFRPKELVIRIMLPAGTKNAAGLDLDVAERRLLLGTPKEQRYV-DIK--LPYPVHEKQGAAKFDKASAVLTVTVPVQPPPRLPSTAALDATAKELVEA-----------TEPA--------------DRAEEGRECPAWRRDEPEPAP--------NSRWVTEVPQGETFSFEPPP----------------------APPVEVGQPKEG------KGAGMEEDELVVQGNYTACECFAGPRPGYVFKLGDSGLGYYKDAVAEEEVEEEAEAAVQHREPRFEWRENERSVSVIVDVENVPQESIKACWGKQSLDLAFSALEEGLAYRLQLALAGEILPDSCKCDAATENICVLMYKKERRVWGQLVEA 1585 +D K FD C HP AL A+++ F+D LV+TA++ VE+ Y + +++ SRT+H+L GV YK+G P +++A + + + P G N G + ++P K P+K Q A A+ L A +P + +P P +I ERG FD+ + ++ + RPKELV+ + L A GLDL++A+ L + + D+K LPYPV +G+AKFD+ LTV PV LP +A + +++ + +EP +R E RE + AP ++R++ + + + PP P + ++ AG VV N+ A + + G R G+VFK G GLGYY+DAV+ + P E R+ + +VIVDV V + + + L +G + L+L G + C+ DAA N+ ++ K W + EA Sbjct: 157 RDKKDNSVGAFDCCFHPLALQHAESARPFRDLLVSTAIDAVEQSYENQNQPTKL--SRTYHVLLGVKYKTGPPQALMVASDFNGKPXXXXXXXXXXXXXXXPEGPSFADNIRGSLKSQP--KPEPEKPLDD-------------------------QRARARKLLEKANRKPSSNAAATPRPVNPLDAPTSIKERGAFDLQNFRIGAGSEADR--RPKELVVEVSLEK-CATAKGLDLELAQASFKLKMVLDGTVLYDVKRTLPYPVDGNKGSAKFDRKRRTLTVVAPV-----LPRSAEEEEKDRQMRQTQPESVVKVMGGSEPEVIREHTTAFGQRRRERVVEPRETLEQKDQRLAKAPPRQKKADDHARFLEKRAKPSRVTPRPPSNDKSKEKTWXXXXXXXXXXXDLVPSINASIAEDNVERARKAAAGFRAAPDVVDENFAASKTYTGTRKGFVFKKGAKGLGYYRDAVSVAFL------------PTIEARQRSTTATVIVDVAGVSNVDVTVDGTEARVSL------DGKTFGLRL---GGQVQGECRADAADANVVLVFTKSGDETWPTVAEA 679
BLAST of mRNA_C-australica_Contig_1021.7.1 vs. uniprot
Match: A0A7S2CZE5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CZE5_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.870e-21 Identity = 114/374 (30.48%), Postives = 160/374 (42.78%), Query Frame = 2 Query: 62 DSKGQDTTTFDVCVHPEALLKAKASDNFKDFLVTTAMEQVEKQYAGASSGSEIAVSRTFHILKGVSYKSGDPATMLMALESSAQ-------GLTGTGAGK---------------TPKQSTQPAGNA-------------------------GGEIPAKPQGKSLPQKQQXXXXXXXXXXGV--------------KEVGEVSRVAQVGG-------------------GQEAAAKVKLAGATM----------QPRESPGKPATPAKQRFTITERGVFDMADHMHEGSNQVQQAFRPKELVIRIMLPAGTKNAAGLDLDVAERRLLLGTPKEQRY---VDIKLPYPVHEKQGAAKFDKASAVLTVTVPVQPPP 904 D G TFD C HPEAL +A S FKD +V TA++ VE + + + R +H+L+GV+YK+GDPA M++ E A+ + GA TP +S PAG+ GG + + ++ P XXXX +E ++ A+ G AA V L G M Q E PG P +TI E G F M++HM++ +VQQ RP++L I++ LP K A+GLDLDV + L+L K+ R + I++PYPV ++G AKF + VLTVTVPVQPPP Sbjct: 148 DRNGSTAPTFDACFHPEALTQALRSKPFKDLIVQTAIDNVEAAVLQVTK-QKTKLDRKYHVLRGVTYKNGDPAIMMVPKEKVAETHLGKMASMANAGAXXXXXXXXXXKASEPALTPAKSPAPAGSGKGPNKXXXXXXXXXXXXXVKKGFLDGGSTTSNSKAEAAPAXXXXXXXAAADKKPATLEEMHASLMETWHEEQAMKAKQAEAEGKXXXXXXXXXXXXXXXXXXAAPAAGDVALPGDAMASVTKVPMAAQRAEVPGVGGGPTTPAYTIVESGEFKMSEHMND---RVQQMRRPQQLRIKVELPLLEK-ASGLDLDVNDNELVLKMAKKMRANYALTIRMPYPVIGEKGGAKFK--NGVLTVTVPVQPPP 514
BLAST of mRNA_C-australica_Contig_1021.7.1 vs. uniprot
Match: T0QNF0_SAPDV (Protein kintoun n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QNF0_SAPDV) HSP 1 Score: 107 bits (266), Expect = 1.890e-20 Identity = 98/287 (34.15%), Postives = 136/287 (47.39%), Query Frame = 2 Query: 62 DSKGQDTTTFDVCVHPEALLKAKASDNFKDFLVTTAMEQVEKQYAGASSGSEIAVSRTFHILKGVSYKSGDPATMLMALESSAQGLTGTGAGKTPKQSTQPAGNAGGEIPAKPQGKSLPQKQQXXXXXXXXXXGVKEVGEVSRVAQVGGGQEAAAKVKLAGATMQPRESPGKPATPAKQRFTITERGVFDMADHMHEGSNQVQQAFRPKELVIRIMLPAGTKNAAGLDLDVAERRLLL-GTPKEQRYVDIKLPYPVHEKQGAAKFDKASAVLTVTVPVQPPPRLPST 919 D G+ TFDVC HP+ L + + S F L+ TA++ V+ + ++ ++ VSR +HILKGV YK+G P TM ++ TPK T+ A + P XXXXX K K + A KPA F I +RG FDMADHM G ++ FRP+ELV+++ LP T +AAG+DLDV+ ++ + T +D LP+PV E +G AKFDKA+ L VT+PV P P T Sbjct: 146 DKGGKAVMTFDVCYHPQTLARGRDSPAFLKMLIGTALDGVDLALS-KTNPNDGHVSRDYHILKGVQYKTGSPITMCIS---------------TPKAPTESAPSTSAAKLNSPAAAXXXXXXXXXXXXANTKPDTKPSSXXXXXXXXXXXXXXETKPAIVAA---------KPAIV----FQIVQRGQFDMADHMENGEKKL---FRPRELVLKMDLPTHT-SAAGIDLDVSATQVKVESTAYAPLCID--LPFPVVEAKGVAKFDKATKKLIVTLPVIPEAPRPPT 397 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1021.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1021.7.1 >prot_C-australica_Contig_1021.7.1 ID=prot_C-australica_Contig_1021.7.1|Name=mRNA_C-australica_Contig_1021.7.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=522bp MEQVEKQYAGASSGSEIAVSRTFHILKGVSYKSGDPATMLMALESSAQGLback to top mRNA from alignment at C-australica_Contig_1021:12484..16245+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1021.7.1 ID=mRNA_C-australica_Contig_1021.7.1|Name=mRNA_C-australica_Contig_1021.7.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3762bp|location=Sequence derived from alignment at C-australica_Contig_1021:12484..16245+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1021:12484..16245+ >mRNA_C-australica_Contig_1021.7.1 ID=mRNA_C-australica_Contig_1021.7.1|Name=mRNA_C-australica_Contig_1021.7.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1566bp|location=Sequence derived from alignment at C-australica_Contig_1021:12484..16245+ (Chrysoparadoxa australica CS_1217)back to top |