mRNA_C-australica_Contig_102.5.2 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_102.5.2 vs. uniprot
Match: D7G5S0_ECTSI (Phosphatidic acid phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5S0_ECTSI) HSP 1 Score: 146 bits (368), Expect = 6.840e-36 Identity = 78/224 (34.82%), Postives = 128/224 (57.14%), Query Frame = 2 Query: 248 GWGNFPVKLDGVTCLPEELAACPAATE--CCEKKESGFKPSDTVTLHELMLISFFVPAALLAIRMGVIKVSASRRTSLKFRGNTLSHVLGCVAGVGTTAVVTEYTKVIIGRPRPNYLALQQMEGY--------ETESIKSFPSGHASCSMASLGYMTFIAWGDILS-THRNKS---TIKVYMAVPPLILAFWIGLTRIRDYWHHHDDVFAGQALGFLCSYTAYR 877 G FPV L C +L++C +E CC+ ++G P +TV +L + F +PAA +A+R + K+ R + + +LG V +G + +T+ K ++GRPRPNY AL+ + + + +SI+SFPSGH+S SMA + Y+T + WGD+ NKS ++ Y+++ P++++ ++G++RIRD+WH DDV AG ALG + A R Sbjct: 58 GINGFPVGLGAEWCTASDLSSCAIQSESGCCKGMQAGKSPHETVDEFQLWFVYFVIPAAFVAVRQVLAKLGLYRGAA-----SLADVILGLVFCLGLSVTLTDAIKFMVGRPRPNYAALRALVEHGGSNVMSLKAKSIRSFPSGHSSMSMAGMFYVTLVCWGDLSRFAAENKSWRRSLLAYLSICPILISIYVGVSRIRDFWHFQDDVVAGWALGAASAALAVR 276
BLAST of mRNA_C-australica_Contig_102.5.2 vs. uniprot
Match: A0A835YK58_9STRA (Phosphatidic acid phosphatase type 2/haloperoxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK58_9STRA) HSP 1 Score: 123 bits (309), Expect = 5.190e-28 Identity = 89/260 (34.23%), Postives = 128/260 (49.23%), Query Frame = 2 Query: 164 QIAAVVLVNGLLYSLAWLIPIFQSAVPIGWGN----FPVKLDGVTCLPEELAACPAAT------------ECCEKKESGFKPSDTVTLHELMLISFFVPAALLAIRMGVIKVSASRRTSLKFRGNTLSHVLGCVAGVGTTAVVTEYTKVIIGRPRPNYLALQQME------GYETESIK-----SFPSGHASCSMASLGYMTFIAWGDI--LSTHRNKSTIKVYMAVPPLILAFWIGLTRIRDYWHHHDDVFAGQALGFL 856 + A V++ +LY++ + + +P N FPVKL V C ++LA C + +CC + +G P + V+ L + +P+ LL R K A R + G+ L LG VA V VVT + K +GRPRPN+LAL ++ G T + SFPSGHAS SMA+L Y +AWGD L R + T+ V + + L+ W+G+TRI+DYWH DDV AG +G L Sbjct: 8 EYAIVIVTTQILYAIGKSMTFYAQYLPADAENQQHSFPVKLGDVWCTAKQLAPCSIGSPAIQAILAAAHGDCCAQLLAGELPHEQVSTWTLAALVLVMPSVLLVARHFASK--AGRYPARLPSGDAL---LGFVASVSWVGVVTLFIKKAVGRPRPNFLALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALRGPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVGAL 262
BLAST of mRNA_C-australica_Contig_102.5.2 vs. uniprot
Match: A0A2I0JU44_PUNGR (acidPPc domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0JU44_PUNGR) HSP 1 Score: 95.5 bits (236), Expect = 1.720e-18 Identity = 54/142 (38.03%), Postives = 73/142 (51.41%), Query Frame = 2 Query: 503 VLGCVAGVGTTAVVTEYTKVIIGRPRPNYLALQQMEGYET-----------------ESIKSFPSGHASCSMASLGYMTFIAWGDILSTHRNKSTIKVYMAVPPLILAFWIGLTRIRDYWHHHDDVFAGQALGFLCSYTAYR 877 +LG + V TAV+T+ K GRPRP++ +G E E KSFPSGHAS S A LG+++ G I + RN K+ + PL+ A + +TR+ DYWHH DVFAG LGF+ + YR Sbjct: 100 ILGLLYAVLITAVITDAIKDATGRPRPDFFWRCFPDGVEAYDKGGGVKCHGKDSVIKEGHKSFPSGHASWSFAGLGFLSLYLSGKIKAFDRNGHVAKLCIVFLPLLAASLVAVTRVDDYWHHWQDVFAGGLLGFVVAAFCYR 241
BLAST of mRNA_C-australica_Contig_102.5.2 vs. uniprot
Match: A0A835ZFV7_9STRA (Phosphatidic acid phosphatase type 2/haloperoxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFV7_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.180e-18 Identity = 49/130 (37.69%), Postives = 69/130 (53.08%), Query Frame = 2 Query: 536 AVVTEYTKVIIGRPRPNYLALQQMEGYETESIK------------SFPSGHASCSMASLGYMTFIAWGDILST-----HRNKSTIKVYMAVPPLILAFWIGLTRIRDYWHHHDDVFAGQALGFLCSYTAY 874 ++ T + K +GRPRPNY AL ++ SFPS H+S +MA+ G+ + WGD RN + + +A+ + A W+G+TRI+DYWHH DDVFAG ALG LC+ Y Sbjct: 5 SIATLFIKKGVGRPRPNYAALVEVVAQSPALAAGSAGALGGHPRTSFPSAHSSHAMAAFGFFALVVWGDAARRVGPLWARNLAGM---VALLSMACAIWVGMTRIQDYWHHPDDVFAGWALGALCAKIGY 131
BLAST of mRNA_C-australica_Contig_102.5.2 vs. uniprot
Match: B9SJW9_RICCO (Phosphatidic acid phosphatase, putative n=3 Tax=Ricinus communis TaxID=3988 RepID=B9SJW9_RICCO) HSP 1 Score: 95.5 bits (236), Expect = 4.330e-18 Identity = 53/141 (37.59%), Postives = 72/141 (51.06%), Query Frame = 2 Query: 503 VLGCVAGVGTTAVVTEYTKVIIGRPRPNYLALQQMEGYE-----------------TESIKSFPSGHASCSMASLGYMTFIAWGDILSTHRNKSTIKVYMAVPPLILAFWIGLTRIRDYWHHHDDVFAGQALGFLCSYTAY 874 +LG + V TAV+T+ K +GRPRPN+ +G E E KSFPSGH S S A LG++T G I + R K+ + + PL+ A +G++R+ DYWHH DVFAG LG + S Y Sbjct: 123 ILGLLFSVLITAVITDTIKNAVGRPRPNFFWRCFPDGKEFYDQLGDVICHGKDSDIKEGHKSFPSGHTSWSFAGLGFLTLYLSGKIKAFDRRGHVAKLCLLILPLLAAALVGISRVDDYWHHWQDVFAGAFLGLVVSAFCY 263
BLAST of mRNA_C-australica_Contig_102.5.2 vs. uniprot
Match: D8SCJ6_SELML (acidPPc domain-containing protein (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SCJ6_SELML) HSP 1 Score: 93.2 bits (230), Expect = 6.370e-18 Identity = 53/142 (37.32%), Postives = 73/142 (51.41%), Query Frame = 2 Query: 506 LGCVAGVGTTAVVTEYTKVIIGRPRPNYLALQQMEG---YET---------------ESIKSFPSGHASCSMASLGYMTFIAWGDILSTHRNKSTIKVYMAVPPLILAFWIGLTRIRDYWHHHDDVFAGQALGFLCSYTAYR 877 LG + V TAV+T+ K +GRPRP++ +G Y T E KSFPSGH S S A LGY++ G I + R K+ + V PL+ A +G++R+ DYWHH DVFAG +G ++ YR Sbjct: 82 LGLLFAVLITAVLTDAIKDAVGRPRPDFFWRCFPDGIPLYTTRTREVMCTGDKADIREGYKSFPSGHTSWSFAGLGYLSLYLAGKICAFDRQGRVAKLIIVVVPLLGATLVGISRVDDYWHHWQDVFAGAIIGLTMAHICYR 223
BLAST of mRNA_C-australica_Contig_102.5.2 vs. uniprot
Match: A0A6P8DZG1_PUNGR (lipid phosphate phosphatase 2-like n=2 Tax=Punica granatum TaxID=22663 RepID=A0A6P8DZG1_PUNGR) HSP 1 Score: 95.5 bits (236), Expect = 6.590e-18 Identity = 54/142 (38.03%), Postives = 73/142 (51.41%), Query Frame = 2 Query: 503 VLGCVAGVGTTAVVTEYTKVIIGRPRPNYLALQQMEGYET-----------------ESIKSFPSGHASCSMASLGYMTFIAWGDILSTHRNKSTIKVYMAVPPLILAFWIGLTRIRDYWHHHDDVFAGQALGFLCSYTAYR 877 +LG + V TAV+T+ K GRPRP++ +G E E KSFPSGHAS S A LG+++ G I + RN K+ + PL+ A + +TR+ DYWHH DVFAG LGF+ + YR Sbjct: 124 ILGLLYAVLITAVITDAIKDATGRPRPDFFWRCFPDGVEAYDKGGGVKCHGKDSVIKEGHKSFPSGHASWSFAGLGFLSLYLSGKIKAFDRNGHVAKLCIVFLPLLAASLVAVTRVDDYWHHWQDVFAGGLLGFVVAAFCYR 265
BLAST of mRNA_C-australica_Contig_102.5.2 vs. uniprot
Match: U9SIY4_RHIID (acidPPc domain-containing protein n=7 Tax=Rhizophagus TaxID=1129544 RepID=U9SIY4_RHIID) HSP 1 Score: 94.4 bits (233), Expect = 6.840e-18 Identity = 52/143 (36.36%), Postives = 75/143 (52.45%), Query Frame = 2 Query: 506 LGCVAGVGTTAVVTEYTKVIIGRPRPNYL-ALQQMEGYE-------------------TESIKSFPSGHASCSMASLGYMTFIAWGDILSTHRNKSTIKVYMAVPPLILAFWIGLTRIRDYWHHHDDVFAGQALGFLCSYTAY 874 LG + + ++TE KV++GRPRP+++ Q ++G ++ KSF SGH+S S A LG++TF G + R T K ++AV PLILA WI ++R +DY HH DV AG LG + AY Sbjct: 65 LGLLFSISLALLITETFKVLVGRPRPDFIDRCQPIKGSTDAQVYGLSSSEICTRTDLLSDGFKSFLSGHSSTSFAGLGFLTFYLTGKLHIFDRKGYTYKGFVAVAPLILAIWIAISRTQDYRHHWQDVLAGSILGLVLGLYAY 207
BLAST of mRNA_C-australica_Contig_102.5.2 vs. uniprot
Match: A0A7N2KKN1_QUELO (acidPPc domain-containing protein n=5 Tax=Quercus TaxID=3511 RepID=A0A7N2KKN1_QUELO) HSP 1 Score: 94.4 bits (233), Expect = 1.630e-17 Identity = 53/141 (37.59%), Postives = 73/141 (51.77%), Query Frame = 2 Query: 506 LGCVAGVGTTAVVTEYTKVIIGRPRPNYLALQQMEGYE-----------------TESIKSFPSGHASCSMASLGYMTFIAWGDILSTHRNKSTIKVYMAVPPLILAFWIGLTRIRDYWHHHDDVFAGQALGFLCSYTAYR 877 LG + V TAV+T+ K +GRPRP++ +G E E KSFPSGH S S A LG+++F G I + R K+ + PL++A IG++R+ DYWHH DVFAG LG + + YR Sbjct: 126 LGLLFSVLVTAVITDAIKDAVGRPRPDFFYRCFPDGKEFYDQLGNVICHGKASDIKEGHKSFPSGHTSWSFAGLGFLSFYLSGKIQAFDRKGHVAKLCIIFLPLLVASLIGVSRVNDYWHHWQDVFAGGLLGLVVAAFCYR 266
BLAST of mRNA_C-australica_Contig_102.5.2 vs. uniprot
Match: A0A397SIK1_9GLOM (Phosphatidic acid phosphatase type 2/haloperoxidase n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397SIK1_9GLOM) HSP 1 Score: 93.2 bits (230), Expect = 1.890e-17 Identity = 53/143 (37.06%), Postives = 76/143 (53.15%), Query Frame = 2 Query: 506 LGCVAGVGTTAVVTEYTKVIIGRPRPNYL-ALQQMEGYET-------------------ESIKSFPSGHASCSMASLGYMTFIAWGDILSTHRNKSTIKVYMAVPPLILAFWIGLTRIRDYWHHHDDVFAGQALGFLCSYTAY 874 LG + + T ++TE K ++GRPRP+++ Q ++G E KSF SGH S S A LG+++F G + + T K ++ V PLILA +IG++RI+DY HH DVFAG LGF+ AY Sbjct: 93 LGLLFSISLTLLLTEIFKNLVGRPRPDFIDRCQPIKGSTDAQVYGLSNVEICTRTNLLKEGFKSFLSGHTSNSFAGLGFLSFYLAGKLHIFDQRGHTYKGFVVVAPLILAIFIGISRIQDYRHHWQDVFAGSLLGFILGLYAY 235 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_102.5.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_102.5.2 >prot_C-australica_Contig_102.5.2 ID=prot_C-australica_Contig_102.5.2|Name=mRNA_C-australica_Contig_102.5.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=236bp MLISFFVPAALLAIRMGVIKVSASRRTSLKFRGNTLSHVLGCVAGVGTTAback to top mRNA from alignment at C-australica_Contig_102:12593..14565- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_102.5.2 ID=mRNA_C-australica_Contig_102.5.2|Name=mRNA_C-australica_Contig_102.5.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1973bp|location=Sequence derived from alignment at C-australica_Contig_102:12593..14565- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_102:12593..14565- >mRNA_C-australica_Contig_102.5.2 ID=mRNA_C-australica_Contig_102.5.2|Name=mRNA_C-australica_Contig_102.5.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=708bp|location=Sequence derived from alignment at C-australica_Contig_102:12593..14565- (Chrysoparadoxa australica CS_1217)back to top |