mRNA_C-australica_Contig_102.4.4 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_102.4.4 vs. uniprot
Match: A0A3M1IFY5_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A3M1IFY5_9BACT) HSP 1 Score: 209 bits (532), Expect = 8.350e-54 Identity = 151/445 (33.93%), Postives = 207/445 (46.52%), Query Frame = 2 Query: 68 VPVLVQWDSLSLGPEHTCGVHRNTEFVSCWGEGQDGRLGLALGTNTIDVGDNESPGVFGRVQLEGAVTEIAAGPEHTCSRTRLGRIRCWGNGADGRLGYGSQDIIGDDEVPGRDVRLGTIALVRPATQVVVGGRHTCALLETIAGQRNIKCWGANESGQLGYGDTLTIGDDEEPGDDPLQLVDLGAAEGFLNALLNPVQGKKLAAGDSHTCAITEDDNVMCWGRRT--DVG-GN---IGDDEDPGDVGNLDIGAGRTAVDIAASGDRTCIIDDIGQVSCWGVDQRVSTFSLGGTDXXXXXXXXXXXXXXXXXXXXXXXXQFLAPAFTPAVVLGLDRTAFDVKISDTHTCVILDGTFNMICWGLPAFGKLGYGNLLPIPTPLVALPLFVEVCWEADCGATLDVNECDALPSQTCNTGKCIDAIDTFSCDCFGSGFGGANCEINAND 1384 V +L ++ G HTC + N + V CWG G +G+LG NT D+GDNESP G V + G VT+I AG HTC+ G++RCWG GA G+LGYG+ + IGD+E+P G + + TQ+ G HTCALL+T I+CWG SGQLGYG+T TIGD+E P ++ G++N LAAG +HTCA+ + + CWG + +G GN IGD+E P VG ++IG TA I TC + D G+V CWG + G T + P+ + + T + HTC +L T ++ CWG +G+LGY N I P + + + G TL A TC +D C+G GF G N ND Sbjct: 487 VNILGSTKQIAAGAYHTCALFWNGK-VRCWGRGAEGQLGYG---NTNDIGDNESPSSVGYVDVGGTVTQIVAGNVHTCALLDTGKVRCWGYGASGQLGYGNANAIGDNEMPSS---AGDVNVGGTVTQIAAGYNHTCALLDT----GKIRCWGDASSGQLGYGNTTTIGDNESP-----------SSVGYVNV---GGTATHLAAGYNHTCALLDTGKIRCWGAGSYGQLGYGNTATIGDNELPSSVGYVNIGG--TATQITGGQFHTCALLDTGKVRCWG-NGIAGQLGYGSTSNVGDG---------------------VGPSIIDVGDINVGDTVMQITAGQNHTCALL-ATGSIRCWGNGQYGRLGYANTNNIGDSFGETPAAIG---DVNVGGTL--THIMAGYEHTCAV------VDNRGIRCWGYGFYGRLGYGNTND 870
BLAST of mRNA_C-australica_Contig_102.4.4 vs. uniprot
Match: A0A0Q8DJ85_9ACTN (Cadherin_4 domain-containing protein n=2 Tax=unclassified Nocardioides TaxID=2615069 RepID=A0A0Q8DJ85_9ACTN) HSP 1 Score: 206 bits (524), Expect = 2.650e-52 Identity = 142/371 (38.27%), Postives = 176/371 (47.44%), Query Frame = 2 Query: 74 VLVQWDSLSLGPEHTCGVHRNTEFVSCWGEGQDGRLGLALGTNTIDVGDNESPGVFGRVQLEGAVTEIAAGPEHTCSRTRLGRIRCWGNGADGRLGYGSQDIIGDDEVPGRDVRLGTIALVRPATQVVVGGRHTCALLETIAGQRNIKCWGANESGQLGYGDTLTIGDDEEPGDDPLQLVDLGAAEGFLNALLNPVQGKKLAAGDSHTCAITEDDNVMCWGR----RTDVGG--NIGDDEDPGDVGNLDIGAGRTAVDIAASGDRTCIIDDIGQVSCWGVDQRVSTFSLGGTDXXXXXXXXXXXXXXXXXXXXXXXXQFLAPAFTPAVVLGLDRTAFDVKISDTHTCVILDGTFNMICWGLPAFGKLGYGN 1168 VL S+ G HTC V + VSCWG G DG+LG NT DVGDNE P GRV+L + +AAG +HTC+ G +RCWG GA+GRLG G+ IGDDE P L + L PA + GG HTCA+L G ++CWG N+ GQLG G T TIGD+E P P + L A + ++AG HTCAI V CWG RT NIGD+E+P + +GAGR A I + G+ TC D V CWG G +D P V LG +A V THTC ILD N+ CWG+ G+LG G+ Sbjct: 463 VLQAAASIVAGGSHTC-VLLDDGTVSCWGRGADGQLGYG---NTNDVGDNEDPWRAGRVELGASARALAAGEQHTCALLTDGSVRCWGRGANGRLGSGNTSNIGDDETP---ASLPAVNLGGPAVAITAGGMHTCAIL----GSGAVRCWGLNDVGQLGIGSTATIGDNEAPAAAPDARIGLRA--------------RSISAGARHTCAILAQGEVRCWGSGANGRTGYASTANIGDNENPSTKEPVRLGAGRQAARITSGGEHTCAQLDNATVRCWGKGFG-GRLGYGNSDDIGNNEH---------------------PDAVGVVPLGASASA--VIAGGTHTCAILDDG-NVRCWGISNVGQLGTGS 783
BLAST of mRNA_C-australica_Contig_102.4.4 vs. uniprot
Match: A0A7W1K6U9_9ACTN (Chromosome condensation regulator (Fragment) n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7W1K6U9_9ACTN) HSP 1 Score: 193 bits (490), Expect = 4.940e-51 Identity = 119/274 (43.43%), Postives = 158/274 (57.66%), Query Frame = 2 Query: 89 DSLSLGPEHTCGVHRNTEFVSCWGEGQDGRLGLALGTNTIDVGDNESPGVFGRVQLEGAVTEIAAGPEHTCSRTRLGRIRCWGNGADGRLGYGSQDIIGDDEVPGRDVRLGTIALVRPATQVVVGGRHTCALLETIAGQRNIKCWGANESGQLGYGDTLTIGDDEEPGDDPLQLVDLGAAEGFLNALLNPVQGKKLAAGDSHTCAITEDDNVMCWG--RRTDVG----GNIGDDEDPGDVGNLDIGAGRTAVDIAASGDRTCIIDDIGQVSCWG 892 ++S G H+C V + V CWG G DGRLG A N +GD+E+PG G V L GA I+AG +HTC+ G + CWG G +GRLGY + IG D+ P +G + L PA + G HTCALLE +++CWG +G+LGY +T TIGD+E PG + G + AL PV K ++AGD+H+CA+ E+ +V CWG + +G N+GDDE PG V +D+GAGRTAV I+A G TC D G V CWG Sbjct: 156 QAISAGGGHSCAVLGDAS-VRCWGFGNDGRLGYA---NPRTIGDDETPGSAGPVALGGAARAISAGRDHTCALLDGGSVLCWGLGDNGRLGYANTTTIGRDQTP---ESVGPVDLGGPAQAISAGHGHTCALLE----DGSVRCWGYGGNGELGYANTNTIGDNEVPG-----------SAGPV-ALGGPV--KAISAGDAHSCALLENGSVRCWGYGQHGRLGYASTNNVGDDETPGSVEPVDLGAGRTAVAISAGGRHTCARLDDGGVRCWG 404
BLAST of mRNA_C-australica_Contig_102.4.4 vs. uniprot
Match: UPI0013DC9C9A (RTX toxin n=1 Tax=Pyxidicoccus caerfyrddinensis TaxID=2709663 RepID=UPI0013DC9C9A) HSP 1 Score: 194 bits (492), Expect = 8.130e-49 Identity = 134/377 (35.54%), Postives = 176/377 (46.68%), Query Frame = 2 Query: 95 LSLGPEHTCGVHRNTEFVSCWGEGQDGRLGLALGTNTIDVGDNESPGVFGRVQLEGAVTEIAAGPEHTCSRTRLGRIRCWGNGADGRLGYGSQDIIGDDEVPGRDVRLGTIALVRPATQVVVGGRHTCALLETIAGQRNIKCWGANESGQLGYGDTLTIGDDEEPGDDPLQLVDLGAAEGFLNALLNPVQGKKLAAGDSHTCAITEDDNVMCWGRRT-------DVGGNIGDDEDPGDVGNLDIGAGRTAVDIAASGDRTCIIDDIGQVSCWGVDQR--VSTFSLGGTDXXXXXXXXXXXXXXXXXXXXXXXXQFLAPAFTPAVV---LGLDRTAFDVKISDTHTCVILDGTFNMICWGLPAFGKLGYGNLLPIPTP 1189 L G HTC + N V CWG G GRLG NT +GDNE P G V L V+++A G HTC+ G +RCWGN G+LGY + IGD E +G + L PA ++ G HTCALL T ++CWG N SGQLGYG T IGDD+EP +Q+ GA PVQ + A +HTCA+ V CWG + + G +GD+E P VG++++G T + +A G+ TC + D G + CWG + + V S G T F P V LG A V HTC +L G+ + CWG + G+LGYGN + P Sbjct: 408 LRAGDTHTCAL-LNDGSVRCWGTGSLGRLGYG---NTDTIGDNELPSSRGAVPLPEKVSQLATGGAHTCALLGSGLVRCWGNNQYGQLGYRHTNHIGDTEPV---TSMGYVNLGTPAVRITAGANHTCALLTT----NKVRCWGLNGSGQLGYGHTNNIGDDDEPSSVDVQV---GA----------PVQD--VFARGNHTCALLLSGKVRCWGDNSLGQLGYSNGGSAVGDNEHPSSVGDVNLGG--TTIQLALGGNHTCALMDTGAMKCWGYNAQGQVGNGSSGAT-------------------------------FNPVVYDVGLGAGNKAIQVAAGANHTCALL-GSGLIKCWGAGSSGQLGYGNTNQLLAP 724
BLAST of mRNA_C-australica_Contig_102.4.4 vs. uniprot
Match: UPI001CBD37B5 (hypothetical protein n=1 Tax=Corallococcus sp. AS-1-12 TaxID=2874598 RepID=UPI001CBD37B5) HSP 1 Score: 187 bits (474), Expect = 9.300e-49 Identity = 134/376 (35.64%), Postives = 180/376 (47.87%), Query Frame = 2 Query: 89 DSLSLGPEHTCGVHRNTEFVSCWGEGQDGRLGLALGTNTIDVGDNESPGVFGRVQLEGAVTEIAAGPEHTCSRTRLGRIRCWGNGADGRLGYGSQDIIGDDEVPGRDVRLGTIALVRPATQVVVGGRHTCALLETIAGQRNIKCWGANESGQLGYGDTLTIGDDEEP---GDDPLQLVDLGAAEGFLNALLNPVQGKKLAAGDSHTCAITEDDNVMCWGRRT--DVG----GNIGDDEDPGDVGNLDIGAGRTAVDIAASGDRTCIIDDIGQVSCWGVDQRVSTFSLGGTDXXXXXXXXXXXXXXXXXXXXXXXXQFLAPAFTPAVVLGLDRTAFDVKISDTHTCVILDGTFNMICWGLPAFGKLGYGNLLPIPTP 1189 +S+ G +H C + N V CWG G G+LG NT +GDNE P G V++ G T++AAG H+C G +RCWG G+LGY ++D +GD E G + L PAT++ VG H+CA++ T ++CWG N+ GQLGYG+T TIGDDE+P GD VDLGA V + AGD HTCA+ +D ++CWGR +G NIGD+E P + A + AS TC + G V CWG + T + FLA + T V LG TA V H C +L T ++ CWGL + G+LGYGN + P Sbjct: 34 NSIRTGWDHACAL-LNDGSVRCWGYGAFGQLGYE---NTQSIGDNELPYTAGAVKILGKGTKLAAGGNHSCVLMDTGLVRCWGLNTYGQLGYNNKDNLGDGEPV---TSFGYVNLGGPATRIAVGAEHSCAVMAT----GKVRCWGRNQYGQLGYGNTNTIGDDEQPWSAGD-----VDLGA-----------VTATDVVAGDDHTCALLSNDKMLCWGRNGLGQLGYPHRNNIGDNELPSSQTPFE--PKGPAAQLTASKHSTCALLKSGSVICWGDNYSGQTGN---------NIFNDYVWYCGEHPTAYCYFNFLANSTT--VNLG-GATALQVTSGGEHACALLS-TGSVRCWGLNSTGQLGYGNTATLVVP 367
BLAST of mRNA_C-australica_Contig_102.4.4 vs. uniprot
Match: A0A0C2A2F2_9DELT (Molybdopterin oxidoreductase, iron-sulfur binding subunit n=2 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A0C2A2F2_9DELT) HSP 1 Score: 191 bits (484), Expect = 1.100e-48 Identity = 150/445 (33.71%), Postives = 199/445 (44.72%), Query Frame = 2 Query: 95 LSLGPEHTCGVHRNTEFVSCWGEGQDGRLGLALGTNTIDVGDNESPGVFGRVQLEGAVTEIAAGPEHTCSRTRLGRIRCWGNGADGRLGYGSQDIIGDDEVPGRDVRLGTIALVRPATQVVVGGRHTCALLETIAGQRNIKCWGANESGQLGYGDTLTIGDDEEP---GDDPLQLVDLGAAEGFLNALLNPVQGKKLAAGDSHTCAITEDDNVMCWGRRTDVG-------GNIGDDEDPGDVGNLDIGAGRTAVDIAASGDRTCIIDDIGQVSCWGVDQRVSTFSLGGTDXXXXXXXXXXXXXXXXXXXXXXXXQFLAPAFTPAVV--LGLDRTAFDVKISDTHTCVILDGTFNMICWGLPAFGKLGYGNLLPI---PTPLVALPLFVEVCWEADCGATLDVNECDALPSQTCNTGKCIDAIDTFSCDCFGSGFGGANCEINAND 1384 +S G H C + +T V CWG G GRLG NT +GDNE P G V + GAV +I+AG HTC+ G +RCWG G +GRLGYG+Q IGDDE P +G + L P ++ GG TCALLE A ++CWGA G+LGYG+T IGD+E+P GD V++G ++ GDSH CA+ + + CWG VG GN+GD+E P D G + +G TAV + D TC + D G V CWG + GG + PA V + + + + C L+G + CWG G LGYGNL I P VA D G V+ A +TC +++ + C+G G GA N ND Sbjct: 222 VSHGFSHACAL-LDTGAVRCWGWGAHGRLGYG---NTDTIGDNEHPFSAGDVNVGGAVVQISAGAHHTCALLDTGAVRCWGGGTNGRLGYGNQLDIGDDEEP---AEVGDVNLGAPVVELDAGGGSTCALLEGGA----VRCWGAGSFGKLGYGNTNNIGDNEDPVFAGD-----VNIGGV------------AVHVSVGDSHVCALLDTGGITCWGNGL-VGRLGYSSSGNVGDNEAPADWGEIQLGG--TAVGVGTGLDHTCALLDTGDVKCWGA-------AWGGA-------------------LGYGNSSHIGDNEHPAAVGVVNIGGVVTQLAVGTRTNCAQLEGGA-VRCWGWANEGGLGYGNLADIGDNEAPAVA--------GNVDIGGFSPVDTLAAGYYRTCVI------LESGALRCWGDGAYGALGYANTND 594
BLAST of mRNA_C-australica_Contig_102.4.4 vs. uniprot
Match: UPI00188DA198 (RCC1 domain-containing protein n=1 Tax=Nocardioides agariphilus TaxID=433664 RepID=UPI00188DA198) HSP 1 Score: 187 bits (475), Expect = 8.290e-48 Identity = 137/368 (37.23%), Postives = 170/368 (46.20%), Query Frame = 2 Query: 146 VSCWGEGQDGRLGLALGTNTIDVGDNESPGVFGRVQLEGAVTEIA--AGPEHTCSRTRLGRIRCWGNGADGRLGYGSQDIIGDDEVPGRDVRLGTIALVRPATQVVVGGRHTCALLETIAGQRNIKCWGANESGQLGYGDTLTIGDDEEPGDDPLQLVDLGAAEGFLNALLNPVQGKKLAAGDSHTCAITEDDNVMCWG---------RRTDVGGNIGDDEDPGDVGNLDIGAGRTAVDIAASGDRTCIIDDIGQVSCWGVDQRVSTFSLGGTDXXXXXXXXXXXXXXXXXXXXXXXXQFLAPAFTPAVVLGLDRTAFDVKISDTHTCVILDGTFNMICWGLPAFGKLGYGNLLPI---PTPLVALPL 1207 V CWG+ G+LG NT +VGD+ SP G V L T +A AG HTC+ +RCWG G+LGYG+ + IGDDE P V + R A + G HTCA+L+ + CWG N SG LGYG+ IGD+E P VDLGA L +AAG HTCA+ ++ V CWG TDV IGD+E PG G +D+G GR A IA S TC+I D V CWG + G TD PA V LG RTA + + HTC ILD T + CWG +G+LGYG+ I TP A P+ Sbjct: 63 VRCWGQNNFGQLGYG---NTDNVGDSASPATAGPVDLGAGRTALAISAGEAHTCAILDDRSVRCWGYNFYGQLGYGNTNNIGDDETPA-SVSPVDLGTGRTALAIAAGVDHTCAILDN----HTVLCWGYNASGGLGYGNLDVIGDNETPAS--AGPVDLGAGRTAL----------AIAAGAQHTCAVLDNHTVRCWGFNSNGELGYGNTDV---IGDNEAPGTAGPVDLGPGRKAFSIAVSDYHTCVILDTKAVRCWGYNAS-GGLGYGNTDNIGDNE---------------------TPADAGPVNLGTGRTASAITAAGEHTCAILD-TKAVRCWGYNFYGQLGYGHTNDIGDNETPATASPV 384
BLAST of mRNA_C-australica_Contig_102.4.4 vs. uniprot
Match: UPI001F07029A (hypothetical protein n=1 Tax=Nocardioides sp. TF02-7 TaxID=2917724 RepID=UPI001F07029A) HSP 1 Score: 187 bits (474), Expect = 8.750e-48 Identity = 134/369 (36.31%), Postives = 169/369 (45.80%), Query Frame = 2 Query: 92 SLSLGPEHTCGVHRNTEFVSCWGEGQDGRLGLALGTNTIDVGDNESPGVFGRVQLEGAVTEIAAGPEHTCSRTRLGRIRCWGNGADGRLGYGSQDIIGDDEVPGRDVRLGTIALVRPATQVVVGGRHTCALLETIAGQRNIKCWGANESGQLGYGDTLTIGDDEEPGDDPLQLVDLGAAEGFLNALLNPVQGKKLA--AGDSHTCAITEDDNVMCWGR----RTDVGG--NIGDDEDPGDVGNLDIGAGRTAVDIAASGDRTCIIDDIGQVSCWGVDQRVSTFSLGGTDXXXXXXXXXXXXXXXXXXXXXXXXQFLAPAFTPAVV--LGLDRTAFDVKISDTHTCVILDGTFNMICWGLPAFGKLGYGN 1168 S++ G HTC V V CWG+G GRLG NTID GDNE P + G V L G + AG EHTC+ GR+RCWG G+ G+LGYGS +GD+E P V +G + L A V G HTCA+L T ++CWG + G+LGY T IGDDE PG +G P+ GK A AG H+CA+ V CWGR R ++GDDE P G D+ G V I+A TC + G+V CWG GT+ TPA + L A V HTCV L G+ + C+G +G+LGYGN Sbjct: 44 SVAAGDRHTCVVTA-AGAVRCWGDGASGRLGYG---NTIDRGDNEHPALAGDVDLGGKALAVTAGSEHTCALLTAGRVRCWGEGSSGQLGYGSVTDVGDNEAP---VSVGNVPLGGKAVAVAAGAAHTCAVLTT----GKVRCWGEGDHGRLGYAATDDIGDDETPGS-------VGNV---------PLGGKATAVTAGAEHSCALLTTGKVRCWGRGFAGRLGYAAEDDLGDDESPASAG--DVVVGGKVVAISAGARHTCAVLAGGRVRCWGQGLHGRLGYGNGTNIGNNE--------------------------TPASAGDVELYSAAAAVAAGGEHTCVAL-GSGKLHCFGRSLYGQLGYGN 356
BLAST of mRNA_C-australica_Contig_102.4.4 vs. uniprot
Match: A0A7W1KB02_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7W1KB02_9ACTN) HSP 1 Score: 184 bits (468), Expect = 1.970e-47 Identity = 139/374 (37.17%), Postives = 174/374 (46.52%), Query Frame = 2 Query: 95 LSLGPEHTCGVHRNTEFVSCWGEGQDGRLGLALGTNTIDVGDNESPGVFGRVQL-EG-AVTEIAAGPEHTCSRTRLGRIRCWGNGADGRLGYGSQDIIGDDEVPGR--DVRLGTIALVRPATQVVVGGRHTCALLETIAGQRNIKCWGANESGQLGYGDTLTIGDDEEPGD-DPLQLVDLGAAEGFLNALLNPVQGKKLAAGDSHTCAITEDDNVMCWGRRTD--VG-GN---IGDDEDPGDVGNLDIGAGRTAVDIAASGDRTCIIDDIGQVSCWGVDQR-----VSTFSLGGTDXXXXXXXXXXXXXXXXXXXXXXXXQFLAPAFTPAVVLGLDRTAFDVKISDTHTCVILDGTFNMICWGLPAFGKLGYGN 1168 LS G HTC V + V CWG G DG+LG T +GD+ESPG GRV L +G + + AG H+C+ G +RCWG DGRLGYG Q IGD+E P V LG R A + G HTCALL+ ++CWG GQLGYG+T T D E P P+Q A ++AG HTCA+ +D V CWG D +G GN +GDDE P +G +D+G GR+AV I+A D TC + D G V CWG + T S+G + +P V LG R A + TCV LD + CWG A G LG N Sbjct: 98 LSAGFTHTCAV-LDDRSVRCWGFGADGQLGYG---KTDSIGDDESPGSAGRVNLGDGRSAAAVTAGRAHSCAVLDNGTVRCWGFAFDGRLGYGDQSAIGDNEPPAAVGPVNLGA---GRTARAITAGDSHTCALLDNAT----VRCWGYAGLGQLGYGNTTTFSDTETPDKAGPVQFATGRTAVA-------------ISAGSYHTCAVLDDGTVRCWGFGGDGRLGYGNTNSVGDDEVPARLGPVDLGTGRSAVAISAGADHTCAVLDDGTVRCWGSGRSGQLGYARTTSVGDDE---------------------------SPGSVGPVDLGPGRRAVAISAGSDGTCVRLDDA-GVRCWGNGANGLLGNCN 419
BLAST of mRNA_C-australica_Contig_102.4.4 vs. uniprot
Match: A0A2S9XQA1_9DELT (Regulator of chromosome condensation (RCC1) repeat protein n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A2S9XQA1_9DELT) HSP 1 Score: 188 bits (477), Expect = 2.540e-47 Identity = 126/374 (33.69%), Postives = 177/374 (47.33%), Query Frame = 2 Query: 92 SLSLGPEHTCGVHRNTEFVSCWGEGQDGRLGLALGTNTIDVGDNESPGVFGRVQLEGAVTEIAAGPEHTCSRTRLGRIRCWGNGADGRLGYGSQDIIGDDEVPGRDVRLGTIALVRPATQVVVGGRHTCALLETIAGQRNIKCWGANESGQLGYGDTLTIGDDEEPGDDPLQLVDLGAAEGFLNALLNPVQGKKLAAGDSHTCAITEDDNVMCWGR----RTDVGGN--IGDDEDPGDVGNLDIGAGRTAVDIAASGDRTCIIDDIGQVSCWGVDQR-----VSTFSLGGTDXXXXXXXXXXXXXXXXXXXXXXXXQFLAPAFTPAVVLGLDRTAFDVKISDTHTCVILDGTFNMICWGLPAFGKLGYGNLLPI 1180 +L+ G HTC V T + CWG G G LG NT+++GD+E P G + + G V ++ EHTC+ G +RCWG+G G+LG G+ IGD+E+P +G + L Q+ G HTCALL+T + CWG N +GQLGYG+T ++GD+E P + VD+GA ++A G HTC IT+ V CWG R G IGDDE P VG++D+G G A + TC + D G V CWG R +T S+G + P+ AV +G + H+C +L G + CWG + G+LGYG+ + I Sbjct: 348 ALAAGFLHTCAV-LETGRLRCWGFGNGGALGYG---NTMNIGDDEDPATAGDIDIPGDVVQVVTATEHTCALIEGGAVRCWGSGTAGKLGLGNTTFIGDNELPNT---VGPLNLGGTTVQIAAGAVHTCALLDT----GEVLCWGQNSNGQLGYGNTASVGDNETPAS--VGPVDIGAV------------AIRVATGWQHTCVITDTQAVRCWGNGGFGRLGYGDTVTIGDDEPPSSVGDVDLGGGL-ATGLVLGDTHTCALLDDGAVRCWGRSDRGQLGYANTSSIGDDEL---------------------------PSAVGAVEIG--GVVTQLSSFYQHSCALL-GNHAVRCWGRNSNGQLGYGDTITI 665 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_102.4.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_102.4.4 >prot_C-australica_Contig_102.4.4 ID=prot_C-australica_Contig_102.4.4|Name=mRNA_C-australica_Contig_102.4.4|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=622bp MLFIAILLLCQQASAVPVLVQWDSLSLGPEHTCGVHRNTEFVSCWGEGQDback to top mRNA from alignment at C-australica_Contig_102:7843..12590+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_102.4.4 ID=mRNA_C-australica_Contig_102.4.4|Name=mRNA_C-australica_Contig_102.4.4|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4748bp|location=Sequence derived from alignment at C-australica_Contig_102:7843..12590+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_102:7843..12590+ >mRNA_C-australica_Contig_102.4.4 ID=mRNA_C-australica_Contig_102.4.4|Name=mRNA_C-australica_Contig_102.4.4|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1866bp|location=Sequence derived from alignment at C-australica_Contig_102:7843..12590+ (Chrysoparadoxa australica CS_1217)back to top |