mRNA_C-australica_Contig_102.11.2 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_102.11.2 vs. uniprot
Match: A0A8J2S844_9STRA (Origin recognition complex subunit 1 n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S844_9STRA) HSP 1 Score: 223 bits (569), Expect = 3.850e-60 Identity = 207/648 (31.94%), Postives = 308/648 (47.53%), Query Frame = 3 Query: 90 AKGVKYYTSLRQG-GQVYSLNDTVLVKVYQTRATEKQSGSLYCPVQILHIW-----QDLDQDQSKRVTMEVRWYYFRDDL-PAKRRPKA---YLESEIFETNHVDAVPAGAITKKVTV-SYSDYDERLGAK-REMPPGQFICGKLFCVHAQ------------HFMPVNDAPGAVAKRGNSYS----KRKGQLPQKHQAHGARGVDDDALARSSFDNALEKLQLRSVPDKLPCRGRERKQIMNHLRQGIA--DGQGGMLYISGIPGSGKTVTVMEVVSKLKVSAAEAQLPEFDFVSVNAMNLKAPSQLYQ---ESLKNLKWRFNTSSRLPYVTLPCKPLLPLQSGQPQHFLLRCVLLLVDELDYLNTGNRSVMYNLLEWPMQKNNCVYVVGISNLMDLKERLTHKEKSRLGVKEVNFRPYTSDQVKEIVQSRLGETDV---FEAPAIRLAASKVAAWSGDMRMALQICRRGLEIAAATGDEPQ----QRSAKRQKVQVSTDHIQSASRETRYSPLREAIRTAVPLEKLVVIAVVALCRKSGKQIVTFESLRDHVAKMCDVVNKGMLKQGQGLKKYDLPDLEDYETPKLE-ELLEVVKSLIFSTVLTMFKSKTSKTSPRHPTVMLSMSS---ADVAAALHQDAIARRFL 1901 A G ++ S + G + + D V+V++ E +S + QIL IW +D D+D+ EVRW Y +++ PAKRRP Y + E+FET HVD VPA ++ V V SY Y +R + R+ F C ++ AQ +RG ++ + +P+ H G R D L R+S NAL QL + P +LPCR ER I N + + ++ G G LY++G+PG+GKT TV EVV L+ + F FV VNAM L P+ Y E+L K + ++RL SG+ Q V++LVDELDY+ T + V+YNL EWP +KN + V+GI+N +DL ERL K +SRLG + + F PY Q++ I+ RL D+ F+ A+ +AA K+AA+SGD+R AL IC R E+ A D + + + K ++ V+ + +A R R S AI A PLE+LV+IA+ A R + E + +A++ + D D P ELLE+V + +L ++ K R P + L++ ADV + +A RFL Sbjct: 41 ADGCRFRDSFKYTEGASFKVGDCVMVQLEGEGVREGESLR-HAAAQILQIWWPAPEEDEDEDEP---WAEVRWLYCAEEIVPAKRRPAPAAKYADREVFETTHVDEVPASSLMGCVEVLSYDAYVQRRQKEDRKAMKDVFFCRYVWEPGAQLTECGPAAERCRRXXXXXXXXXXXXRRGAAWDGDVVSDEEHIPEDHATRGPR----DRLRRAS--NAL---QLSAAPKRLPCRENERDTIENFVLEMLSAPGGDGRTLYVAGMPGTGKTATVREVVRALQETGNA-----FRFVEVNAMRLPQPNHAYALLWEALTGEKRGADAAARLLDKRF--------SSGEEQE---ERVVVLVDELDYMLTQRQEVLYNLFEWPGRKNAGLAVIGIANTLDLPERLDPKVRSRLGSRRLTFAPYKPAQIESILTQRLSAGDLSAAFQPQAVTMAARKIAAYSGDIRRALLICSRATELCAERADAARRAGDEATPKEKEYVVTIADVNAADRGLRESAYLGAIEHAAPLEQLVLIALCAELRARKSETAPLEDVARRLARLVALAG----------------DAGDSSRPPTHGELLEIVDRFADARLLA---TEHLKRDDRFPALRLNIQDGIVADVLINASKHPLAERFL 640
BLAST of mRNA_C-australica_Contig_102.11.2 vs. uniprot
Match: A0A197JQ12_9FUNG (Cell division control protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JQ12_9FUNG) HSP 1 Score: 209 bits (532), Expect = 1.050e-55 Identity = 155/435 (35.63%), Postives = 215/435 (49.43%), Query Frame = 3 Query: 639 RSSFDNALEKLQLRSVPDKLPCRGRERKQIMNHLRQGIADGQGGMLYISGIPGSGKTVTVMEVVSKLKVSAAEAQLPEFDFVSVNAMNLKAPSQLYQESLKNLKWRFNTSSRLPYVTLPCKPLLPLQSGQPQHFLLRCVLLLVDELDYLNTGNRSVMYNLLEWPMQKNNCVYVVGISNLMDLKER-LTHKEKSRLGVKEVNFRPYTSDQVKEIVQSRLGETDVFEAPAIRLAASKVAAWSGDMRMALQICRRGLEIAAATGDEPQ-QRSAKRQK------------VQVSTDHIQSASRETRYSPLREAIRTAVPLEKLVVIAVVALCRKSGKQIVTFESLRDHVAKMCDVVNKGMLKQGQGLKKYDLPDLEDYETPKLEELLEVVKSLIFSTVLTMFKSKTSKTSPRHPTVMLSMSSADVAAALHQDAIARRFL 1901 ++ F++A +L +++VPD LPCR E +I HL I DG G +YISG+PG+GKT TV EV+ L+ A E ++ F FV +N M + PS Y L W + ++ LL Q P L CV+L+ DELD L T ++VMYN EWP ++ + VV ++N MDL ER L++K SRLG+ +NF+PY+ Q+ +IV+SRL F AI AA KV A SGD R AL ICRR +EI + + QR K ++ QV+ + A +E SP I+TA +KL ++A+ A R+ G V F + +MC L + E P L EL + SL S L + K H V LS+S DV AL D + RR L Sbjct: 141 KTDFEHARNRLHVKAVPDSLPCREDEFLEIQEHLESAIEDGTGSCIYISGVPGTGKTATVHEVIRSLQAKAEEGEISPFQFVEINGMKVTEPSYAYV-----LLWMALSEQKV--TANHALQLLEKQFSTPGPRRLPCVVLM-DELDLLVTSKQTVMYNFFEWPNWLHSRLIVVAVANTMDLPERMLSNKVSSRLGLTRINFQPYSYQQLVKIVESRLEGIQAFRREAIEFAARKVGAVSGDARRALDICRRAVEIVETNAQKAEDQRRLKAERNPFEDLGPAPDPEQVTIRTVDQAIKEMFASPNVRLIQTASLHQKLFLVALTARLRRLGLAEVEFSEIAHAHLQMCR--------------------LHNIEPPMLSELSAICASLGSSRCLLVESGK----QDLHQRVRLSVSEEDVIMALKIDPLFRRLL 543
BLAST of mRNA_C-australica_Contig_102.11.2 vs. uniprot
Match: A0A2R5GRB9_9STRA (Origin recognition complex subunit 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRB9_9STRA) HSP 1 Score: 212 bits (540), Expect = 1.150e-55 Identity = 164/475 (34.53%), Postives = 221/475 (46.53%), Query Frame = 3 Query: 96 GVKYYTSLRQGGQVYSLNDTVLVKVYQTRATEKQSGSLYCPVQILHIWQDLDQDQSKRVTMEVRWYYFRDDLPAKRRPKAYLESEIFETNHVDAVPAGAITKKVT-VSYSDYDERLGAKREMPPGQFICGKLFCVHAQHFMPVNDAPGAVAKRGNSYSKRKGQL-------------------PQKHQAHG----ARGVDDDALA-----RSSFDNALEKLQLRSVPDKLPCRGRERKQIMNHLRQGIADG-QGGMLYISGIPGSGKTVTVMEVVSKLKVSAAEAQLPEFDFVSVNAMNLKAPSQLYQESLKNLKWRFNTSSRLPYV---------TLPCKPLLPLQSGQPQHFLLRCVLLLVDELDYLNTGNRSVMYNLLEWPMQKNNCVYVVGISNLMDLKERLTHKEKSRLGVKEVNFRPYTSDQVKEIVQSRLGETDVFEAPAIRLAASKVAAWSGDMRMALQICRRGLEI 1403 G KYY ++R G + + + D V V V E +S P + +W +K EVRW+ P + R ESE+FE++ VD AI VS D+ ER + + K G +SKR L QK Q + RGV+ A F A ++LQL + P LPCR ER I LR IA G GG LYISG+PG+GKT TV EVV L+ A L +FDFV +N M L P Q Y E K L + + +R + T + P R +LLVDELDY+ T ++V+YNL +WP + N + VVGI+N MDL ERL + SRLG+ V F+ YT DQ++ I+++RL D+FE A++++A KVA+ SGD+R ALQICRR EI Sbjct: 72 GEKYYEAVRIGDEEFKVGDFVSVLVLDAAGKETES-----PAVLESMWSS--NGPAKGPMCEVRWFVD----PQETRAGVGDESEVFESDKVDECSIDAINGHARIVSEEDFWERTRDQPLIGDDDXXXXXXXXASDXXXXXXXXXXXXXXKTGRKHSKRSKLLFCKDFFAEELEIIRPSTLFTQKRQTYAYSKRLRGVNLTASKLGDSEADKFSRAFQQLQLSATPPSLPCRDAERDTIHTFLRDAIAGGGAGGALYISGMPGTGKTATVHEVVRSLQREARNGSLADFDFVEINGMRLPHPYQAYTELHKALTGQNASQTRAAQLLEQRFAGSSTRASSAQASSTTDSP-----RTCVLLVDELDYMVTRKQTVLYNLFDWPTRPNVHLVVVGIANTMDLPERLLPRIASRLGMSRVVFQSYTRDQLERIIRARLEGLDIFEQDAVQMSARKVASLSGDVRRALQICRRAAEI 530
BLAST of mRNA_C-australica_Contig_102.11.2 vs. uniprot
Match: A0A0L0HV52_SPIPD (Cell division control protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HV52_SPIPD) HSP 1 Score: 206 bits (523), Expect = 1.440e-54 Identity = 135/361 (37.40%), Postives = 193/361 (53.46%), Query Frame = 3 Query: 618 VDDDALARSSFDNALEKLQLRSVPDKLPCRGRERKQIMNHLRQGIADGQGGMLYISGIPGSGKTVTVMEVVSKLKVSAAEAQLPEFDFVSVNAMNLKAPSQLYQ---ESLKNLKW-----------RFNTSSRLPYVTLPCKPLLPLQSGQPQHFLLRCVLLLVDELDYLNTGNRSVMYNLLEWPMQKNNCVYVVGISNLMDLKER-LTHKEKSRLGVKEVNFRPYTSDQVKEIVQSRLGETDVFEAPAIRLAASKVAAWSGDMRMALQICRRGLEIAAATGDEPQQRSAKRQKVQVSTDHIQSASRETRYSPLREAIRTAVPLEKLVVIAVVALCRKSGKQIVTFESLRDHVAKMCDVVN 1655 + + + RS F+ A E+L + VPD LPCR E +I H+ I +G G +YISG+PG+GKT TV V+ L +A + ++P F FV +N M L PSQ Y E L K+ RFNT+S P + V++L+DELD L T N++VMYN WP ++ + VV ++N MDL ER LT++ SRLG+ +NF+PYT Q+ EIVQSRL FE AI L A KV A SGD R AL ICRRG+EI AT + + + V+ I A +E SP ++++ A ++L ++A+V R+ G V + + D ++C + N Sbjct: 137 LQERSTPRSEFEKARERLHVSVVPDALPCRETEFAEIYGHVESAINEGTGCCVYISGVPGTGKTATVHRVMRALSEAAEQEEIPPFQFVEINGMKLTEPSQSYSLLLEVLTGQKFSAAHAGNLLEKRFNTAS-------------------PDR---QSVVVLMDELDLLVTKNQTVMYNFFNWPNLAHSRLIVVAVANTMDLPERMLTNRVSSRLGLTRINFQPYTHQQLIEIVQSRLERVRCFEKDAIVLCARKVGAISGDARRALDICRRGVEILEATLRDAEAAGKPLDQKMVTMAVIDRAVKEMFASPAVQSVQRASTHQRLFLVAIVRNVRRGGTAEVEYGQVADEHIRLCKLGN 475
BLAST of mRNA_C-australica_Contig_102.11.2 vs. uniprot
Match: A0A196SIS9_BLAHN (Origin recognition complex subunit 1 n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SIS9_BLAHN) HSP 1 Score: 205 bits (522), Expect = 5.820e-54 Identity = 155/480 (32.29%), Postives = 236/480 (49.17%), Query Frame = 3 Query: 3 AHMTVSEGDSDSDRDDDVTCIGRPYYANKAKGVKYYTSLRQGGQVYSLNDTVLVKVYQTRATEKQSGSLYCPVQILHIWQDLDQDQSKRVTMEVRWYYFRDDLPAKRRPKAYLESEIFETNHVDAVPAGAITKKVTV-SYSDYDERLGAKREMPPGQFICGKLFCVHAQHFMPVND-APGAVAKRGNSYS-------KRKGQLPQKHQAHGARGVDDDALARSSFDNALEKLQLRSVPDKLPCRGRERKQIMNHLRQGIAD-GQGGMLYISGIPGSGKTVTVMEVVSKLKVSAAEAQLPEFDFVSVNAMNLKAPSQLYQESLKNLKWRFNTSSRLPYVTLPCKPLLPLQSGQPQHFLLRCVLLLVDELDYLNTGNRSVMYNLLEWPMQKNNCVYVVGISNLMDLKER-LTHKEKSRLGVKEVNFRPYTSDQVKEIVQSRLGETDVFEAPAIRLAASKVAAWSGDMRMALQICRRGLEIAA 1409 AH + S +D+D K +Y ++ G +++ D V + + + + +I +W +D+ ME RWYY +D+ A RP Y + E+FET+H+ GAI + V+V S+ + E KRE F C F + P+ D P +R + YS KR P + + ++ A + A E L L VP+ +PCR +ERK+I ++L I + G G LYISG+PG+GKT TV EVV +L+ + + F F+ +N M L + S + L L ++ SS V P + +P ++LL DELDYL T N+ V+Y L +WP + N+ + V+GISN +DL ER L+ + SRL + V F+PY+ +Q+ I+ RL VF AI L + KV+A SGD+R AL I +RG+E+AA Sbjct: 4 AHRKAVKRKSSRQKDEDDLAFRWVGSGYKHNDCVFYEEVQHGEDHFAIGDVVELCASGKQPSLEGDYKTSWIAEIDALW----EDEHGEKMMECRWYYGINDMSASARPP-YRKRELFETDHLSNNELGAIVQSVSVYSHEKWLELPAEKRE---SCFFCDYFFSTKTNYIHPLYDNTPAKKLERIHLYSYMNPKSSKRDSPAPLTSRKRSRKNASNETPA-VLMERAKEHLMLSFVPESIPCREKERKEIYDYLYHSIQNKGNGSPLYISGMPGTGKTATVREVVRELQKTLS------FRFLEINGMKLTSASSAFSLLLHFLTHKYVVSSHAAEVLNEYFS-TPKRKKEPP------LVLLADELDYLFTKNQQVIYKLFDWPNEPNSHLIVIGISNTIDLPERILSLRSISRLSMNRVLFKPYSREQIATIINQRLDALAVFSPEAIDLCSRKVSAVSGDIRRALMIAKRGVELAA 461
BLAST of mRNA_C-australica_Contig_102.11.2 vs. uniprot
Match: I1CI64_RHIO9 (AAA domain-containing protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CI64_RHIO9) HSP 1 Score: 201 bits (511), Expect = 7.310e-54 Identity = 127/341 (37.24%), Postives = 184/341 (53.96%), Query Frame = 3 Query: 624 DDALARSSFDNALEKLQLRSVPDKLPCRGRERKQIMNHLRQGIADGQGGMLYISGIPGSGKTVTVMEVVSKLKVSAAEAQLPEFDFVSVNAMNLKAPSQLYQESLKNLKWRFNTSSRLPYVTLPCKPLLPLQSGQPQHFLLRCVLLLVDELDYLNTGNRSVMYNLLEWPMQKNNCVYVVGISNLMDLKERL-THKEKSRLGVKEVNFRPYTSDQVKEIVQSRLGETDVFEAPAIRLAASKVAAWSGDMRMALQICRRGLEIAAATGDEPQQRSAKRQKVQVSTDHIQSASRETRYSPLREAIRTAVPLEKLVVIAVVALCRKSGKQIVTFESLRDHVAKMC 1643 ++A + SS+ A E+L + +VPD LPCR E I +L I + G +YISG+PG+GKT TV EV+ L+ A E +P FDF +N M L P+Q Y + +T R Y + LL + +P R ++L+DELD L T ++VMYN +WP + + + VV I+N MDL ERL ++K SR+G+ +NF+PY DQ+ +IVQSRL D F AI AA KV+A SGD R AL ICRR +EI S +K+QV+ I A +E SP IR+ +K+ +++ + R G + F + + + C Sbjct: 27 ENATSLSSYALARERLHVSAVPDSLPCREEEFMSISGYLESAIQESTGTCIYISGVPGTGKTATVHEVIRHLQQQAEEENIPYFDFAEINGMKLTDPNQAYSILWDCINKPNDTEKRRKYTAAHAQQLLEAKFSKPNEDQ-RVTVVLMDELDLLVTKKQTVMYNFFDWPSRPLSKLIVVAIANTMDLPERLMSNKIASRMGLTRINFQPYRYDQLIQIVQSRLEGIDAFAKEAIEFAARKVSAVSGDARRALDICRRAVEIVEQKSIATVTDSTNEKKMQVTIAVIDGAIKEMFTSPSVAFIRSCSLHQKIFLVSCMQRSRAVGMAEIEFGDVAHYHVQTC 366
BLAST of mRNA_C-australica_Contig_102.11.2 vs. uniprot
Match: A0A7S0K2Q0_CAFRO (Origin recognition complex subunit 1 (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K2Q0_CAFRO) HSP 1 Score: 194 bits (492), Expect = 6.150e-53 Identity = 118/259 (45.56%), Postives = 158/259 (61.00%), Query Frame = 3 Query: 636 ARSSFDNALEKLQLRSVPDKLPCRGRERKQIMNHLRQGIADGQG-GMLYISGIPGSGKTVTVMEVVSKLKVSAAEAQLPEFDFVSVNAMNLKAPSQLYQESLKNLKWRFNTSSRLPYVTLPCKPLLPLQSGQPQHFLLRCVLLLVDELDYLNTGNRSVMYNLLEWPMQKNNCVYVVGISNLMDLKERLTHKEKSRLGVKEVNFRPYTSDQVKEIVQSRLGETDVFEAPAIRLAASKVAAWSGDMRMALQICRRGLEIAA 1409 A S +A ++LQL SVPD+LPCR ER + L G+ G LY+SG+PG+GKT TV EV++ L+ SAA +L FD V VNA+ L P QLY + L R +R LL + P R V+L+VDELD L T ++V+YNLL+WP +++ + VVGI+N MDL ER+ + SRLG+ V F+PYT DQ+++IV RL VF + A+ +AA KVAA SGD+R AL ICRR E+AA Sbjct: 14 AASPHASACQRLQLSSVPDRLPCREAERASVRAFLEGGVRAGTAKSSLYLSGMPGTGKTATVREVLAGLRASAAAGELAPFDEVWVNALALSHPHQLYSTVWRALTTRNAAPAR-------AAQLLEARFSAPSAGR-RAVVLVVDELDCLVTRKQTVLYNLLDWPSRRHARLVVVGIANTMDLPERMLPRVHSRLGLARVVFQPYTRDQIRDIVCDRLSGLSVFRSDAVEMAARKVAALSGDVRRALHICRRAAELAA 264
BLAST of mRNA_C-australica_Contig_102.11.2 vs. uniprot
Match: A0A0M0J4L9_9EUKA (Origin recognition complex subunit 1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J4L9_9EUKA) HSP 1 Score: 202 bits (515), Expect = 1.020e-52 Identity = 175/583 (30.02%), Postives = 279/583 (47.86%), Query Frame = 3 Query: 72 PYYANKAKGVKYYTSLRQGGQVYSLNDTVLVKVYQTRATEKQSGSLYCPVQILHIWQDLDQDQSKRVTMEVRWYYFRDDLPAKRRPKAYLESEIFETNHVDAVPAGAITKKVTV----SYSDYDERLGAKREMPPGQFICGKLFCVHAQHFMPVNDA--------------------PGAVAKRGN-SYSKR--KGQLPQKHQAHGARGVDDDALARSS----FDNALEKLQLRSVPDKLPCRGRERKQIMNHLRQGIADGQ-GGMLYISGIPGSGKTVTVMEVVSKLKVSAAEAQLPEFDFVSVNAMNLKAPSQLY--------------QESLKNLKWRFN--TSSRLPYVTLPCKPLLPLQSGQPQHFLLRCVLLLVDELDYLNTGNRSVMYNLLEWPMQKNNCVYVVGISNLMDLKERLTHKEKSRLGVKEVNFRPYTSDQVKEIVQSRLGETDVFEAP--AIRLAASKVAAWSGDMRMALQICRRGLEIA--------AATGDEPQQRSAKRQKVQVSTDHIQSASRETRYSPLREAIRTAVPLEKLVVIAVVALCRKSGKQIVTFESLRDHVAKMCD 1646 P + A G + Y+++R G + +NDTV+V+V + + +I +W+D+ + E RWYY ++ R + E+FET HVD I TV +Y + ++ + F C ++ + F+P+ A P A A R Y+ R +G+L G+ G+ R F A +L +VP+++PCR +ER +++ LR + +G GG LYISG PG+GKT TV + + +L A+ L +F + VN M + P Q+Y +L+ L+ RF T+SRL + K + + G + V+L++DELDYL T +SV+YNL EW + N + VVGISN MDL ERL + +SRL ++ VNF PY ++ I+ RLG D F A + L A KVA+ +GD+R AL++CR +IA + E + +A++ V+ HI+ A ++ R S L A++ A P KL++ A+V L ++G+ V +LR +C+ Sbjct: 17 PLISIGAGGERMYSAVRVGTDTFHVNDTVIVRVDGFGSDQV--------ARIEALWEDVRGAK----WWEGRWYYTPEETTCGRLV-GHDPRELFETVHVDENLVDTIDCHCTVMEWDAYQRWLDQPAEDDDEEETTFACRAMYHAGSGEFVPLTGASTLAEAARIGGRQLQLHSAPPAADAMRAAPQYAPRAFRGEL-------GSSGLPTLGAGRKRRLGRFSEAAARLAPSAVPERMPCREKERAEVIATLRAAVLEGALGGSLYISGTPGTGKTATVHQALREL---TADRTL-QFRSIFVNGMKMSTPFQVYALLWEGLTGQAVKPSRALELLERRFAAPTTSRLSFS----KAVQQRRKGASEK-----VILILDELDYLVTSRQSVLYNLFEWSTRANAALVVVGISNTMDLPERLLPRVESRLNIRRVNFHPYDRSALESIITDRLGTLDAFAAGDGGLELCARKVASVTGDVRRALEVCRLATQIAEREEAAAHSERASEGGKGAARQAPTHVTIAHIEEAHKQLRGSALLLAVQGAPPQLKLMLAAMVLLLERTGRSEVDRTTLRGRHRDLCE 566
BLAST of mRNA_C-australica_Contig_102.11.2 vs. uniprot
Match: A0A7S4JDP0_GUITH (Origin recognition complex subunit 1 n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JDP0_GUITH) HSP 1 Score: 196 bits (499), Expect = 1.080e-52 Identity = 124/340 (36.47%), Postives = 189/340 (55.59%), Query Frame = 3 Query: 648 FDNALEKLQLRSVPDKLPCRGRERKQIMNHLRQGIADGQ-GGMLYISGIPGSGKTVTVMEVVSKLKVSAAEAQLPEFDFVSVNAMNLKAPSQLYQESLKNLKWRFNTSSRLPYVTLPCKPLLPLQSGQPQHFLLR---CVLLLVDELDYLNTGNRSVMYNLLEWPMQKNNCVYVVGISNLMDLKERLTHKEKSRLGVKEVNFRPYTSDQVKEIVQSRLGETDVFEAPAIRLAASKVAAWSGDMRMALQICRRGLEIAAATGDEPQQRSAKRQKVQVSTDHIQSASRETRYSPLREAIRTAVPLEKLVVIAVVALCRKSGKQIVTFESLRDHVAKMCDVVN 1655 F A E LQL + P LPCR E ++I LR IA G+ GG +YISG+PG+GKT +V V+ +K + + L F ++ +N L P+ LY L+ L + T P + + L S LR CVLL VDELDYL T ++V+YNL EWP +K+ + V+G++N MDL ER+ + SRLG++ + F PY Q++EI+ SRL + + F+A A+ L + KVAA SGD+R ALQ+CR E+A + VS HI+ A ++ +P A++ + LEK+V+ + V L +++G ++ E + D ++ +N Sbjct: 5 FARADEALQLSTTPSSLPCREGEHEEIKEVLRDAIARGKSGGCIYISGVPGTGKTASVHAVIKDMKAESDKGSLEPFIYIEINGQRLPKPNVLYSVLLQGLTGK---------KTDPVQAAISLDSYFGSRSGLRRPVCVLL-VDELDYLITRKQTVLYNLFEWPTRKHARLIVLGVANTMDLPERMLPRVCSRLGLRRITFAPYNHQQLQEIISSRLADLEAFDAKAVELCSRKVAAVSGDVRKALQLCRYACELARQDKSDF-----------VSLKHIEMAVKQLFSNPYVAAVQGSSLLEKIVICSAVQLMKETGDTNLSVEHIHDRTVEIHRQLN 323
BLAST of mRNA_C-australica_Contig_102.11.2 vs. uniprot
Match: A0A8D0H865_SPHPU (Origin recognition complex subunit 1 n=1 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0H865_SPHPU) HSP 1 Score: 204 bits (518), Expect = 4.590e-52 Identity = 150/415 (36.14%), Postives = 218/415 (52.53%), Query Frame = 3 Query: 648 FDNALEKLQLRSVPDKLPCRGRERKQIMNHLRQGIADGQGGMLYISGIPGSGKTVTVMEVVSKLKVSAAEAQLPEFDFVSVNAMNLKAPSQLYQESLKNLKWRFNTSSRLPYVT--LPCKPLLPLQSGQPQHFLLRCVLLLVDELDYLNTGNRSVMYNLLEWPMQKNNCVYVVGISNLMDLKER-LTHKEKSRLGVKEVNFRPYTSDQVKEIVQSRLGETDVFEAPAIRLAASKVAAWSGDMRMALQICRRGLEIAAATGDEPQQRSAKRQKVQVSTDHIQSASRETRYSPLREAIRTAVPLEKLVVIAVVALCRKSGKQIVTFESL-RDHVAKMCDVVNKGMLKQGQGLKKYDLPDLEDYETPKLEELLEVVKSLIFSTVLTMFKSKTSKTSPRHPTVMLSMSSADVAAALHQD 1880 + A +L + +VP+ LPCR E + I N + + DG GG +YISG+PG+GKT TV EV+ +L+ +A LP F+F+ +N M L P Q Y + LK L + T++ + L C P +P+ + +L+VDELD L T ++VMYNL +WP QK+ + V+ I+N MDL ER L ++ SRLG+ ++F+PYT Q+++I+ SRL + FE AI+L + KVAA SGD R L ICRR EI + QRSA R VS HI A E SP AIR A E+ + A +AL R+ G + + + HVA +C + E + P + E++ V L T + +SK H V L++S DV AL ++ Sbjct: 450 LEEARLRLHVSTVPESLPCREEEFQDIYNFVESKLIDGTGGCMYISGVPGTGKTATVHEVIHRLQQAAENNDLPSFEFIEINGMKLTDPHQAYVQILKLLTGQKVTATHAALLLEKLFCTP-------KPKR---KTTVLVVDELDLLWTRKQNVMYNLFDWPTQKDAKLIVLAIANTMDLPERILMNRVASRLGLTRMSFQPYTYKQLQQIISSRLNQRKAFEEDAIQLVSRKVAAVSGDARRCLDICRRSTEICELSS----QRSASRL---VSMAHIMKAMDEMFSSPYINAIRNASLQEQTFLKATIALFRRIGLEEAAIQQVYHQHVA-LCRI--------------------EGLQVPTVSEIVAVSSRL--GTCRLLLVESSSKY--LHARVRLNVSQEDVMYALKEE 822 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_102.11.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_102.11.2 >prot_C-australica_Contig_102.11.2 ID=prot_C-australica_Contig_102.11.2|Name=mRNA_C-australica_Contig_102.11.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=646bp MTVSEGDSDSDRDDDVTCIGRPYYANKAKGVKYYTSLRQGGQVYSLNDTVback to top mRNA from alignment at C-australica_Contig_102:61567..66276+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_102.11.2 ID=mRNA_C-australica_Contig_102.11.2|Name=mRNA_C-australica_Contig_102.11.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4710bp|location=Sequence derived from alignment at C-australica_Contig_102:61567..66276+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_102:61567..66276+ >mRNA_C-australica_Contig_102.11.2 ID=mRNA_C-australica_Contig_102.11.2|Name=mRNA_C-australica_Contig_102.11.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1938bp|location=Sequence derived from alignment at C-australica_Contig_102:61567..66276+ (Chrysoparadoxa australica CS_1217)back to top |