mRNA_C-australica_Contig_10190.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10190.1.1 vs. uniprot
Match: A0A2E3N0I9_9FLAO (Peptidase M28 family protein n=1 Tax=Crocinitomicaceae bacterium TaxID=2026728 RepID=A0A2E3N0I9_9FLAO) HSP 1 Score: 317 bits (812), Expect = 1.780e-104 Identity = 148/204 (72.55%), Postives = 174/204 (85.29%), Query Frame = 1 Query: 1 VTSYNVICEMTGTEHPEQIITFGGHLDSWDVGEGAHDDGAGIIHNLEALRLLKSNGYRPKNTLRLVFFMNEENGNMGGKTYATWAKAN-GDNIIAAIESDRGGFAPRGFDLDGPNEYLTLLQSFETIFEPYGLHRFEKGFGGVDISPLKAEYEGIPLFGFAVDSQRYFDFHHAESDVFENVNKRELELGCASVAALIYLLDQRL 609 VTSYNVI E+ G ++P IITFGGHLDSWD GEGAHDDGAGI+H LEA+R++K++ Y+P NTLRLVFFMNEENGN GGK+YATWAK +N IAAIESDRGGFAPRGF DGP +Y++LL++FE + Y LH FEKG+GGVDI PLK E+EGIPLFGF DSQRYFDFHHA SD+FENVNKRELELGCA++A+++YLLDQ L Sbjct: 251 VTSYNVIGEIIGNKNPNNIITFGGHLDSWDTGEGAHDDGAGIVHCLEAMRIIKNSKYKPNNTLRLVFFMNEENGNNGGKSYATWAKKQKNENHIAAIESDRGGFAPRGFHCDGPEKYISLLKTFENKLKHYDLHIFEKGYGGVDIGPLKKEFEGIPLFGFVPDSQRYFDFHHAPSDIFENVNKRELELGCAAIASILYLLDQNL 454
BLAST of mRNA_C-australica_Contig_10190.1.1 vs. uniprot
Match: A0A316KA88_9FLAO (Peptidase M28 family protein n=1 Tax=Fluviicola sp. XM-24bin1 TaxID=2133950 RepID=A0A316KA88_9FLAO) HSP 1 Score: 312 bits (799), Expect = 1.690e-102 Identity = 148/203 (72.91%), Postives = 170/203 (83.74%), Query Frame = 1 Query: 1 VTSYNVICEMTGTEHPEQIITFGGHLDSWDVGEGAHDDGAGIIHNLEALRLLKSNGYRPKNTLRLVFFMNEENGNMGGKTYATWAKANGDNIIAAIESDRGGFAPRGFDLDGPNEYLTLLQSFETIFEPYGLHRFEKGFGGVDISPLKAEYEGIPLFGFAVDSQRYFDFHHAESDVFENVNKRELELGCASVAALIYLLDQRL 609 V S+NVI E+TGTE+P++IITFGGHLDSWD GEGAHDDGAG+IH LEALR+LK GY+PK+TLRLVFFMNEENGN GGK+YA G+ IAA+ESDRGGFAPRGF DG EYL +L SFET F Y LH F++G+GGVDISPLK YEGIPLFGF DSQRYFDFHHA SDVFENVNKRELELGCA++A+ +YLLD+ + Sbjct: 253 VQSFNVIAELTGTENPDEIITFGGHLDSWDTGEGAHDDGAGVIHCLEALRILKELGYKPKHTLRLVFFMNEENGNFGGKSYAKIVMDKGEKQIAAVESDRGGFAPRGFTCDGSIEYLKMLASFETHFTNYDLHIFDQGYGGVDISPLKDYYEGIPLFGFVPDSQRYFDFHHAPSDVFENVNKRELELGCAAMASFLYLLDKNI 455
BLAST of mRNA_C-australica_Contig_10190.1.1 vs. uniprot
Match: A0A2G2EBI6_9FLAO (Peptidase M28 family protein n=1 Tax=Fluviicola sp. TaxID=1917219 RepID=A0A2G2EBI6_9FLAO) HSP 1 Score: 309 bits (791), Expect = 2.430e-101 Identity = 150/202 (74.26%), Postives = 169/202 (83.66%), Query Frame = 1 Query: 4 TSYNVICEMTGTEHPEQIITFGGHLDSWDVGEGAHDDGAGIIHNLEALRLLKSNGYRPKNTLRLVFFMNEENGNMGGKTYATWAKANGDNIIAAIESDRGGFAPRGFDLDGPNEYLTLLQSFETIFEPYGLHRFEKGFGGVDISPLKAEYEGIPLFGFAVDSQRYFDFHHAESDVFENVNKRELELGCASVAALIYLLDQRL 609 TSYNVI EMTGTE P++IITFGGHLDSWD GEGAHDDGAGI+H LEALR+LK+ Y+PK+TLRLVFFMNEENGN GG++YA+ AK G+ IAAIESDRGGF PRGF DG +E++TLLQSFE+ Y LH FEKG+GGVDI PLK Y IPLFGF DSQRYFDFHHA SDVFENVNKRELELG A+VA+L+YLLD L Sbjct: 250 TSYNVIGEMTGTEKPDEIITFGGHLDSWDTGEGAHDDGAGIVHCLEALRILKTLNYKPKHTLRLVFFMNEENGNRGGQSYASIAKEKGEKQIAAIESDRGGFTPRGFHCDGSDEFVTLLQSFESDLTHYDLHVFEKGYGGVDIGPLKKYYPEIPLFGFVPDSQRYFDFHHAPSDVFENVNKRELELGAAAVASLLYLLDLNL 451
BLAST of mRNA_C-australica_Contig_10190.1.1 vs. uniprot
Match: F2IBT4_FLUTR (Peptidase M28 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / NCIMB 13979 / RW262) TaxID=755732 RepID=F2IBT4_FLUTR) HSP 1 Score: 309 bits (791), Expect = 2.910e-101 Identity = 140/201 (69.65%), Postives = 164/201 (81.59%), Query Frame = 1 Query: 7 SYNVICEMTGTEHPEQIITFGGHLDSWDVGEGAHDDGAGIIHNLEALRLLKSNGYRPKNTLRLVFFMNEENGNMGGKTYATWAKANGDNIIAAIESDRGGFAPRGFDLDGPNEYLTLLQSFETIFEPYGLHRFEKGFGGVDISPLKAEYEGIPLFGFAVDSQRYFDFHHAESDVFENVNKRELELGCASVAALIYLLDQRL 609 S+NV+CE+TG E P +IIT GGHLDSWD GEGAHDDGAGI+H LEALR+LK G +PK+T+R+VFFMNEENGN GG +YA WAK IAA+ESDRGGF+P GF+ DG Y+ L++ F T+ PYGLH FE G+GGVDISPLK YEGIPLFGF DSQRYFDFHHA SD+FE+VNKRELELGCAS+AA +YLLD+ L Sbjct: 257 SFNVMCEITGKEKPNEIITIGGHLDSWDAGEGAHDDGAGIVHCLEALRILKETGVQPKHTIRVVFFMNEENGNKGGISYAEWAKKENQKQIAAVESDRGGFSPEGFECDGAESYIQLMKGFSTVLAPYGLHHFEAGYGGVDISPLKKSYEGIPLFGFVPDSQRYFDFHHAASDIFESVNKRELELGCASMAAFVYLLDKSL 457
BLAST of mRNA_C-australica_Contig_10190.1.1 vs. uniprot
Match: A0A5C8AF61_9FLAO (Peptidase M28 family protein n=1 Tax=Crocinitomicaceae bacterium TaxID=2026728 RepID=A0A5C8AF61_9FLAO) HSP 1 Score: 308 bits (790), Expect = 4.370e-101 Identity = 143/199 (71.86%), Postives = 167/199 (83.92%), Query Frame = 1 Query: 4 TSYNVICEMTGTEHPEQIITFGGHLDSWDVGEGAHDDGAGIIHNLEALRLLKSNGYRPKNTLRLVFFMNEENGNMGGKTYATWAKANGDNIIAAIESDRGGFAPRGFDLDGPNEYLTLLQSFETIFEPYGLHRFEKGFGGVDISPLKAEYEGIPLFGFAVDSQRYFDFHHAESDVFENVNKRELELGCASVAALIYLLD 600 TSYNVI E+TG+E P +IITFGGHLDSWD GEGAHDDGAGI+H +EALR+LK Y+PK+TLR+VFFMNEENGN GG +YATW KA G+ IAA+ESDRGGF PRGF DG ++ + LQS E F+PY LH FEKG+GGVDI PLK+E+ IPLFGF DSQRYFDFHHAESDVFE VNKRELELGCA+++++IYLLD Sbjct: 258 TSYNVIAEITGSEKPNEIITFGGHLDSWDAGEGAHDDGAGIVHCMEALRILKVLNYKPKHTLRVVFFMNEENGNRGGMSYATWTKARGETQIAALESDRGGFVPRGFACDGSDQQVRFLQSLEKHFKPYELHVFEKGYGGVDIGPLKSEFPSIPLFGFVPDSQRYFDFHHAESDVFEAVNKRELELGCAAISSMIYLLD 456
BLAST of mRNA_C-australica_Contig_10190.1.1 vs. uniprot
Match: A0A1G0CBS9_9FLAO (Peptidase M28 n=1 Tax=Fluviicola sp. RIFCSPHIGHO2_12_FULL_43_24 TaxID=1798019 RepID=A0A1G0CBS9_9FLAO) HSP 1 Score: 307 bits (786), Expect = 1.610e-100 Identity = 143/201 (71.14%), Postives = 167/201 (83.08%), Query Frame = 1 Query: 7 SYNVICEMTGTEHPEQIITFGGHLDSWDVGEGAHDDGAGIIHNLEALRLLKSNGYRPKNTLRLVFFMNEENGNMGGKTYATWAKANGDNIIAAIESDRGGFAPRGFDLDGPNEYLTLLQSFETIFEPYGLHRFEKGFGGVDISPLKAEYEGIPLFGFAVDSQRYFDFHHAESDVFENVNKRELELGCASVAALIYLLDQRL 609 S+NV+ E+TG+E P+QIIT GGHLDSWD GEGAHDDGAGI+H LEALR+LK+ RPK+T+R+VFFMNEENGN GG YA+W K NG+ IAA+ESDRGGF+PRGF+ DG E L ++Q F+ PYGL+ FEKG+GGVDI PLK YE IPLFGF DSQRYFDFHHAESDVFENVNKRELELGCAS+AA +YLLD+ L Sbjct: 256 SHNVMAEITGSEFPDQIITIGGHLDSWDTGEGAHDDGAGIVHCLEALRILKTLKIRPKHTIRVVFFMNEENGNKGGINYASWVKENGEKQIAAVESDRGGFSPRGFECDGSAEQLAMIQEFKQALLPYGLYHFEKGYGGVDIGPLKKHYEEIPLFGFVPDSQRYFDFHHAESDVFENVNKRELELGCASMAAFLYLLDKAL 456
BLAST of mRNA_C-australica_Contig_10190.1.1 vs. uniprot
Match: A0A8J6PGH3_9FLAO (M20/M25/M40 family metallo-hydrolase n=1 Tax=Taishania pollutisoli TaxID=2766479 RepID=A0A8J6PGH3_9FLAO) HSP 1 Score: 306 bits (784), Expect = 2.860e-100 Identity = 142/202 (70.30%), Postives = 164/202 (81.19%), Query Frame = 1 Query: 1 VTSYNVICEMTGTEHPEQIITFGGHLDSWDVGEGAHDDGAGIIHNLEALRLLKSNGYRPKNTLRLVFFMNEENGNMGGKTYATWAKANGDNIIAAIESDRGGFAPRGFDLDGPNEYLTLLQSFETIFEPYGLHRFEKGFGGVDISPLKAEYEGIPLFGFAVDSQRYFDFHHAESDVFENVNKRELELGCASVAALIYLLDQR 606 V SYNVI E+ GT P +IIT GGHLDSWD GEGAHDDGAG++H+LEALR+LK Y+PK+TLR+VFFMNEENGN GG+ YA W K G+ IAAIESDRGGFAPRGF DGP + LT L++ E PY LH FEKG+GGVDISPLK + GIPLFGF DSQRYFDFHHA SDVFENVNKRELELGCA++A+L+Y +DQ+ Sbjct: 250 VPSYNVIAELKGTVFPNRIITVGGHLDSWDTGEGAHDDGAGVMHSLEALRILKQLNYKPKHTLRVVFFMNEENGNQGGENYARWVKDKGEEHIAAIESDRGGFAPRGFHCDGPEDKLTFLKNLEPAMRPYELHIFEKGYGGVDISPLKKHFPGIPLFGFVPDSQRYFDFHHAPSDVFENVNKRELELGCAAIASLMYFIDQQ 451
BLAST of mRNA_C-australica_Contig_10190.1.1 vs. uniprot
Match: A0A556MPU8_9FLAO (M20/M25/M40 family metallo-hydrolase n=2 Tax=Fluviicola chungangensis TaxID=2597671 RepID=A0A556MPU8_9FLAO) HSP 1 Score: 303 bits (775), Expect = 7.360e-99 Identity = 139/201 (69.15%), Postives = 165/201 (82.09%), Query Frame = 1 Query: 7 SYNVICEMTGTEHPEQIITFGGHLDSWDVGEGAHDDGAGIIHNLEALRLLKSNGYRPKNTLRLVFFMNEENGNMGGKTYATWAKANGDNIIAAIESDRGGFAPRGFDLDGPNEYLTLLQSFETIFEPYGLHRFEKGFGGVDISPLKAEYEGIPLFGFAVDSQRYFDFHHAESDVFENVNKRELELGCASVAALIYLLDQRL 609 S+NV+ E+TG+E P +IIT GGHLDSWD GEGAHDDGAGI+H LEALR+LK+ G +PK+T+R+VFFMNEENGN GG YATWAK IAA+ESDRGGF+P GF+ DG Y+ L++ F ++ +PY LH FE G+GGVDISPLK+ YEGIPLFGF DSQRYFDFHHA SDVFE VNKRELELGCAS+AA +YLLD+ L Sbjct: 255 SFNVMGELTGSEKPNEIITIGGHLDSWDAGEGAHDDGAGIVHCLEALRILKTTGIKPKHTIRVVFFMNEENGNKGGHAYATWAKKENQKQIAAVESDRGGFSPDGFECDGNPSYVQLIKGFASLLKPYDLHHFEAGYGGVDISPLKSAYEGIPLFGFVPDSQRYFDFHHAASDVFERVNKRELELGCASMAAFVYLLDKSL 455
BLAST of mRNA_C-australica_Contig_10190.1.1 vs. uniprot
Match: A0A2G6PQ83_9BACT (Peptidase M28 family protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A2G6PQ83_9BACT) HSP 1 Score: 301 bits (771), Expect = 2.550e-98 Identity = 146/202 (72.28%), Postives = 165/202 (81.68%), Query Frame = 1 Query: 4 TSYNVICEMTGTEHPEQIITFGGHLDSWDVGEGAHDDGAGIIHNLEALRLLKSNGYRPKNTLRLVFFMNEENGNMGGKTYATWAKANGDNIIAAIESDRGGFAPRGFDLDGPNEYLTLLQSFETIFEPYGLHRFEKGFGGVDISPLKAEYEGIPLFGFAVDSQRYFDFHHAESDVFENVNKRELELGCASVAALIYLLDQRL 609 TSYNVI EMTGTE PE+IITFGGHLDSWD GEGAHDDGAGI+H LEALR+LK+ YRPK+TLRLVFFMNEENGN GG++YA G+ IAA+ESDRGGFAPRGF DG Y+ LL++FE Y LH FEKG+GGVDISPLK Y IPLFGF DSQRYFDFHHA SDVFENVNKRELELG A++A+L++LLD+ L Sbjct: 250 TSYNVIGEMTGTESPEEIITFGGHLDSWDTGEGAHDDGAGIVHCLEALRILKTLNYRPKHTLRLVFFMNEENGNRGGQSYAKIVSDLGEKQIAAVESDRGGFAPRGFHCDGEENYVQLLETFEEDLTHYDLHVFEKGYGGVDISPLKKYYPEIPLFGFVPDSQRYFDFHHAPSDVFENVNKRELELGAAAIASLLFLLDKNL 451
BLAST of mRNA_C-australica_Contig_10190.1.1 vs. uniprot
Match: UPI000D143B58 (M20/M25/M40 family metallo-hydrolase n=1 Tax=Brumimicrobium mesophilum TaxID=392717 RepID=UPI000D143B58) HSP 1 Score: 301 bits (770), Expect = 5.150e-98 Identity = 138/201 (68.66%), Postives = 168/201 (83.58%), Query Frame = 1 Query: 1 VTSYNVICEMTGTEHPEQIITFGGHLDSWDVGEGAHDDGAGIIHNLEALRLLKSNGYRPKNTLRLVFFMNEENGNMGGKTYATWAKANGDNIIAAIESDRGGFAPRGFDLDGPNEYLTLLQSFETIFEPYGLHRFEKGFGGVDISPLKAEYEGIPLFGFAVDSQRYFDFHHAESDVFENVNKRELELGCASVAALIYLLDQ 603 + S+NVI E+ G+E+P IIT GGH+DSWDVGEGAHDDGAGI+H++EALR+LK GY+P NTLR+VFFMNEENGNMGGKTYA KA+G+N I A+ESDRGGF+PRGF +DG E+L L++SFE +F+PY LH FE G+GGVDI PLK E+E I L GF DSQRYFDFHH +D+FENVNKRELELG S++AL+YLLD+ Sbjct: 261 IKSHNVIAELKGSENPNNIITIGGHIDSWDVGEGAHDDGAGIVHSMEALRILKEMGYKPNNTLRVVFFMNEENGNMGGKTYAKKVKASGENHILAVESDRGGFSPRGFSVDGNQEHLDLVKSFEKLFKPYLLHHFEFGYGGVDIGPLKDEFENIGLIGFVPDSQRYFDFHHNANDIFENVNKRELELGAGSLSALLYLLDR 461 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10190.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10190.1.1 >prot_C-australica_Contig_10190.1.1 ID=prot_C-australica_Contig_10190.1.1|Name=mRNA_C-australica_Contig_10190.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=195bp MTGTEHPEQIITFGGHLDSWDVGEGAHDDGAGIIHNLEALRLLKSNGYRPback to top mRNA from alignment at C-australica_Contig_10190:3..614+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10190.1.1 ID=mRNA_C-australica_Contig_10190.1.1|Name=mRNA_C-australica_Contig_10190.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=612bp|location=Sequence derived from alignment at C-australica_Contig_10190:3..614+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10190:3..614+ >mRNA_C-australica_Contig_10190.1.1 ID=mRNA_C-australica_Contig_10190.1.1|Name=mRNA_C-australica_Contig_10190.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=585bp|location=Sequence derived from alignment at C-australica_Contig_10190:3..614+ (Chrysoparadoxa australica CS_1217)back to top |