mRNA_C-australica_Contig_10182.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10182.1.1 vs. uniprot
Match: UPI0003B704AE (N-succinylarginine dihydrolase n=1 Tax=Oceanicaulis alexandrii TaxID=153233 RepID=UPI0003B704AE) HSP 1 Score: 459 bits (1182), Expect = 5.890e-160 Identity = 228/243 (93.83%), Postives = 233/243 (95.88%), Query Frame = 1 Query: 1 GKYPARQTLQACEAVERRHSLKSERTVHIRQSRKAIDAGAFHNDVVCVGTGPVLFFHEHAFEDKAAAFDAIRKAADGLFDPIFVEVPDAEVPLGDAITSYIFNSQLLIMPGVDRQVLLAPSETEETDSTNLYCANMVAGNGPIGAVKFAHVRQSMRNGGGPACLRLRVVLTEEERRAVNPKVMMNDGLYAALTAWAQTHYREELAPGDLGDPALVTESRTALDALTGILGLGSDFYPFQRAGV 729 GKYPARQTLQACEAVERRH LKSERTVHIRQSRKAIDAGAFHNDVVCVGTGPVLFFHEHAFEDKAAA DAIRKAADGLFDPIF+EVPDAEVPLGDAITSYIFNSQLLIMPGVDRQVLLAPSETEETDSTN+YCANMVAGNGPIGAVKFAHVRQSMRNGGGPACLRLRVVLTE+E R+VNPKVMMND LYAALTAWA+THYRE LAP DLGDPALV ESR ALDALTGILGLGS FYPFQRAG Sbjct: 207 GKYPARQTLQACEAVERRHGLKSERTVHIRQSRKAIDAGAFHNDVVCVGTGPVLFFHEHAFEDKAAALDAIRKAADGLFDPIFMEVPDAEVPLGDAITSYIFNSQLLIMPGVDRQVLLAPSETEETDSTNVYCANMVAGNGPIGAVKFAHVRQSMRNGGGPACLRLRVVLTEDELRSVNPKVMMNDALYAALTAWAETHYREALAPSDLGDPALVAESRAALDALTGILGLGSGFYPFQRAGA 449
BLAST of mRNA_C-australica_Contig_10182.1.1 vs. uniprot
Match: A3UDH8_9PROT (N-succinylarginine dihydrolase n=2 Tax=unclassified Oceanicaulis TaxID=2632123 RepID=A3UDH8_9PROT) HSP 1 Score: 421 bits (1083), Expect = 6.430e-145 Identity = 211/243 (86.83%), Postives = 219/243 (90.12%), Query Frame = 1 Query: 1 GKYPARQTLQACEAVERRHSLKSERTVHIRQSRKAIDAGAFHNDVVCVGTGPVLFFHEHAFEDKAAAFDAIRKAADGLFDPIFVEVPDAEVPLGDAITSYIFNSQLLIMPGVDRQVLLAPSETEETDSTNLYCANMVAGNGPIGAVKFAHVRQSMRNGGGPACLRLRVVLTEEERRAVNPKVMMNDGLYAALTAWAQTHYREELAPGDLGDPALVTESRTALDALTGILGLGSDFYPFQRAGV 729 GK+PARQTLQACEAVERRH LKSERTVHIRQSRKAI+AGAFHNDVVCVGTGPVLFFHEHAFEDKAAA DAIRKAADGLF+P+FVEVPDAEVPL DAITSY+FNSQLLI PG RQVL+AP ETEET STN YC +V GN PIGAVKFA VRQSMRNGGGPACLRLRVVLTE ER AVNPKVMM+D LYA LT WAQTHYRE LAPGDLGDPALV ESR ALDALT ILGLGSDFYPFQRAG Sbjct: 207 GKFPARQTLQACEAVERRHGLKSERTVHIRQSRKAIEAGAFHNDVVCVGTGPVLFFHEHAFEDKAAALDAIRKAADGLFEPVFVEVPDAEVPLEDAITSYLFNSQLLIWPGEARQVLVAPKETEETASTNAYCQRLVDGNTPIGAVKFADVRQSMRNGGGPACLRLRVVLTEAERHAVNPKVMMDDALYAQLTDWAQTHYREALAPGDLGDPALVNESREALDALTSILGLGSDFYPFQRAGA 449
BLAST of mRNA_C-australica_Contig_10182.1.1 vs. uniprot
Match: A0A166ULG6_9CYAN (Succinylarginine dihydrolase n=1 Tax=Leptolyngbya valderiana BDU 20041 TaxID=322866 RepID=A0A166ULG6_9CYAN) HSP 1 Score: 382 bits (981), Expect = 1.920e-129 Identity = 190/241 (78.84%), Postives = 205/241 (85.06%), Query Frame = 1 Query: 4 KYPARQTLQACEAVERRHSLKSERTVHIRQSRKAIDAGAFHNDVVCVGTGPVLFFHEHAFEDKAAAFDAIRKAADGLFDPIFVEVPDAEVPLGDAITSYIFNSQLLIMPGVDRQVLLAPSETEETDSTNLYCANMVAGNGPIGAVKFAHVRQSMRNGGGPACLRLRVVLTEEERRAVNPKVMMNDGLYAALTAWAQTHYREELAPGDLGDPALVTESRTALDALTGILGLGSDFYPFQRAG 726 K+PARQTLQACEA+ RRH L RTVHIRQS+ AI+AGAFHNDVVCVGTGPVLFFHEHAFEDK AA AIRKAA+GLF+P+FVEVP+AE PLGDAITSY+FNSQLLI P DRQVLLAP ETEET STN YC + G+GPIGAVKFA+VRQSMRNGGGPACLRLRVVLTE ER AVNP V MN + AL AWA++HYREELAP DLGDPALV ESR ALD LT IL LGSDFYPFQR G Sbjct: 209 KFPARQTLQACEAIARRHGLDETRTVHIRQSQHAIEAGAFHNDVVCVGTGPVLFFHEHAFEDKDAALSAIRKAAEGLFEPVFVEVPEAEAPLGDAITSYLFNSQLLIWPDADRQVLLAPQETEETASTNAYCQRLTQGDGPIGAVKFANVRQSMRNGGGPACLRLRVVLTEAERNAVNPGVWMNQDKHDALAAWAKSHYREELAPADLGDPALVEESRAALDELTRILQLGSDFYPFQREG 449
BLAST of mRNA_C-australica_Contig_10182.1.1 vs. uniprot
Match: A0A5M6ZAX7_9PROT (N-succinylarginine dihydrolase n=1 Tax=Alkalicaulis satelles TaxID=2609175 RepID=A0A5M6ZAX7_9PROT) HSP 1 Score: 379 bits (974), Expect = 2.280e-128 Identity = 189/242 (78.10%), Postives = 203/242 (83.88%), Query Frame = 1 Query: 4 KYPARQTLQACEAVERRHSLKSERTVHIRQSRKAIDAGAFHNDVVCVGTGPVLFFHEHAFEDKAAAFDAIRKAADGLFDPIFVEVPDAEVPLGDAITSYIFNSQLLIMPGVDRQVLLAPSETEETDSTNLYCANMVAGNGPIGAVKFAHVRQSMRNGGGPACLRLRVVLTEEERRAVNPKVMMNDGLYAALTAWAQTHYREELAPGDLGDPALVTESRTALDALTGILGLGSDFYPFQRAGV 729 K+PARQTLQAC+AV RRH L RTVHIRQSRKAI+AGAFHNDVVCVGTGPVLF+HEHAFED+ AA AIRKAADGLF+P+FVEVPDAEVPL DAITSY+FNSQLLI PG RQVLLAP ETEET ST YC + AGNGPIGAV+FA VRQSMRNGGGPACLRLRVVL E +R AVNP+ + + LTAWA HYRE LAP DLGDPALV ESR ALDALT ILGLGSDFYPFQRAG Sbjct: 209 KFPARQTLQACQAVARRHGLDPARTVHIRQSRKAIEAGAFHNDVVCVGTGPVLFYHEHAFEDRDAALAAIRKAADGLFEPVFVEVPDAEVPLSDAITSYLFNSQLLIWPGEGRQVLLAPKETEETGSTRAYCERLTAGNGPIGAVRFADVRQSMRNGGGPACLRLRVVLDEAQRAAVNPRAWLTPERHEELTAWANAHYRETLAPDDLGDPALVDESRAALDALTQILGLGSDFYPFQRAGA 450
BLAST of mRNA_C-australica_Contig_10182.1.1 vs. uniprot
Match: UPI001EDE3A0A (N-succinylarginine dihydrolase n=1 Tax=Shewanella sp. ER-Te-42B-Light TaxID=2872342 RepID=UPI001EDE3A0A) HSP 1 Score: 372 bits (954), Expect = 3.450e-127 Identity = 188/241 (78.01%), Postives = 200/241 (82.99%), Query Frame = 1 Query: 4 KYPARQTLQACEAVERRHSLKSERTVHIRQSRKAIDAGAFHNDVVCVGTGPVLFFHEHAFEDKAAAFDAIRKAADGLFDPIFVEVPDAEVPLGDAITSYIFNSQLLIMPGVDRQVLLAPSETEETDSTNLYCANMVAGNGPIGAVKFAHVRQSMRNGGGPACLRLRVVLTEEERRAVNPKVMMNDGLYAALTAWAQTHYREELAPGDLGDPALVTESRTALDALTGILGLGSDFYPFQRAG 726 KYPARQTLQACEAV RRH L RTVHIRQSR+AI+AGAFHNDVVCVGTGPVLF+HEHAF D AAA DAIR+AADGLF+P+FVEVPDAEVPL DAI SY+FNSQLLI PG RQVLLAP ETEET ST Y + AGNGPIGAV+FA VRQSMRNGGGPACLRLRVVL E +R AVNP + + ALT WA THYRE LAP DLGDPALV ESR ALDALTGIL LGSDFYPFQR G Sbjct: 81 KYPARQTLQACEAVARRHGLDPARTVHIRQSRQAIEAGAFHNDVVCVGTGPVLFYHEHAFVDSAAALDAIRRAADGLFEPVFVEVPDAEVPLTDAIASYLFNSQLLIWPGESRQVLLAPKETEETPSTRAYAERLTAGNGPIGAVEFADVRQSMRNGGGPACLRLRVVLDEAQRAAVNPGAWLTAQRHDALTEWANTHYRETLAPQDLGDPALVDESRRALDALTGILELGSDFYPFQRPG 321
BLAST of mRNA_C-australica_Contig_10182.1.1 vs. uniprot
Match: A0A550JXP7_9PROT (N-succinylarginine dihydrolase n=1 Tax=Glycocaulis profundi TaxID=2518983 RepID=A0A550JXP7_9PROT) HSP 1 Score: 353 bits (906), Expect = 4.160e-118 Identity = 174/239 (72.80%), Postives = 194/239 (81.17%), Query Frame = 1 Query: 4 KYPARQTLQACEAVERRHSLKSERTVHIRQSRKAIDAGAFHNDVVCVGTGPVLFFHEHAFEDKAAAFDAIRKAADGLFDPIFVEVPDAEVPLGDAITSYIFNSQLLIMPGVDRQVLLAPSETEETDSTNLYCANMVAGNGPIGAVKFAHVRQSMRNGGGPACLRLRVVLTEEERRAVNPKVMMNDGLYAALTAWAQTHYREELAPGDLGDPALVTESRTALDALTGILGLGSDFYPFQR 720 ++PARQT QACEA+ RRH L RTV ++Q R AI+AGAFHNDVVCVG GP LFFHE AFED+A A AIR+AA+GLF+P+FVEVP AEVP+ DAI SY+FNSQLL PG DR VLLAP ETEETDST YC M AGNGPIG V++A VRQSMRNGGGPACLRLRVVLTE+ER AVNP MM D LY LT WAQ HYRE LAP +LGDP LVTE++ ALD LTG+L LGSDFYPFQR Sbjct: 207 RFPARQTKQACEAIARRHGLDPARTVIVKQGRAAIEAGAFHNDVVCVGNGPALFFHELAFEDRAGAIAAIREAAEGLFEPVFVEVPQAEVPIEDAIASYLFNSQLLDWPGEDRMVLLAPQETEETDSTRAYCERMTAGNGPIGRVEYAAVRQSMRNGGGPACLRLRVVLTEDERAAVNPHAMMTDTLYERLTGWAQRHYRESLAPDELGDPDLVTEAQGALDELTGLLDLGSDFYPFQR 445
BLAST of mRNA_C-australica_Contig_10182.1.1 vs. uniprot
Match: A0A0P7VKF0_9PROT (N-succinylarginine dihydrolase n=1 Tax=Oceanicaulis sp. HLUCCA04 TaxID=1666904 RepID=A0A0P7VKF0_9PROT) HSP 1 Score: 349 bits (896), Expect = 1.320e-116 Identity = 177/240 (73.75%), Postives = 191/240 (79.58%), Query Frame = 1 Query: 4 KYPARQTLQACEAVERRHSLKSERTVHIRQSRKAIDAGAFHNDVVCVGTGPVLFFHEHAFEDKAAAFDAIRKAADGLFDPIFVEVPDAEVPLGDAITSYIFNSQLLIMPGVDRQVLLAPSETEETDSTNLYCANMVAGNGPIGAVKFAHVRQSMRNGGGPACLRLRVVLTEEERRAVNPKVMMNDGLYAALTAWAQTHYREELAPGDLGDPALVTESRTALDALTGILGLGSDFYPFQRA 723 ++PARQT QACEA+ RRH L ERTV RQSR AI+AGAFHNDVVCVG GPVLFFHE AFED DAIR AA GLFDP+F EV A+VP+GDAITSYIFNSQLL PG DR VLLAP ETEET ST +C MVAGNGPIG V +A VRQSMRNGGGPACLRLRVVLT E +AVNP VM++D L+ ALT WAQTHYRE L P DL DPAL+TESR ALDALT IL LG DFY FQRA Sbjct: 207 RFPARQTKQACEAIARRHGLDPERTVIARQSRAAIEAGAFHNDVVCVGNGPVLFFHELAFEDTEDTLDAIRAAAKGLFDPVFFEVAQADVPIGDAITSYIFNSQLLDWPGEDRMVLLAPKETEETPSTRAFCEAMVAGNGPIGRVDYADVRQSMRNGGGPACLRLRVVLTPVELKAVNPGVMLDDRLFGALTGWAQTHYRESLKPADLADPALITESRAALDALTQILNLGGDFYDFQRA 446
BLAST of mRNA_C-australica_Contig_10182.1.1 vs. uniprot
Match: Q0ANJ0_MARMM (N-succinylarginine dihydrolase n=1 Tax=Maricaulis maris (strain MCS10) TaxID=394221 RepID=Q0ANJ0_MARMM) HSP 1 Score: 349 bits (896), Expect = 1.320e-116 Identity = 173/241 (71.78%), Postives = 194/241 (80.50%), Query Frame = 1 Query: 1 GKYPARQTLQACEAVERRHSLKSERTVHIRQSRKAIDAGAFHNDVVCVGTGPVLFFHEHAFEDKAAAFDAIRKAADGLFDPIFVEVPDAEVPLGDAITSYIFNSQLLIMPGVDRQVLLAPSETEETDSTNLYCANMVAGNGPIGAVKFAHVRQSMRNGGGPACLRLRVVLTEEERRAVNPKVMMNDGLYAALTAWAQTHYREELAPGDLGDPALVTESRTALDALTGILGLGSDFYPFQRA 723 G YPARQT +ACEAV R H L +R V +RQS+ AIDAGAFHNDVVCVGT LFFHE AF+DKA A D+IR+AADGLF+P+FVEVP+AEVP+GDAITSY+FNSQLL P DR VL+AP ETEET++T YC+ MVAGNG IG V+F VRQSMRNGGGPACLRLRVVLT EE AV P +MN LY L WA THYR+ LAP +LGDPAL+TESR ALDALTGIL LG DFYPFQRA Sbjct: 206 GAYPARQTREACEAVARSHGLDLKRCVFLRQSQAAIDAGAFHNDVVCVGTAKTLFFHELAFDDKAGALDSIRRAADGLFEPVFVEVPEAEVPIGDAITSYLFNSQLLEWPDEDRLVLIAPKETEETETTRAYCSAMVAGNGSIGRVEFVDVRQSMRNGGGPACLRLRVVLTPEELAAVTPSALMNGALYDQLKVWASTHYRDRLAPDELGDPALLTESRAALDALTGILNLGDDFYPFQRA 446
BLAST of mRNA_C-australica_Contig_10182.1.1 vs. uniprot
Match: A0A4S2H232_9PROT (N-succinylarginine dihydrolase n=1 Tax=Marinicauda algicola TaxID=2029849 RepID=A0A4S2H232_9PROT) HSP 1 Score: 348 bits (894), Expect = 2.640e-116 Identity = 171/240 (71.25%), Postives = 198/240 (82.50%), Query Frame = 1 Query: 4 KYPARQTLQACEAVERRHSLKSERTVHIRQSRKAIDAGAFHNDVVCVGTGPVLFFHEHAFEDKAAAFDAIRKAADGLFDPIFVEVPDAEVPLGDAITSYIFNSQLLIMPGVDRQVLLAPSETEETDSTNLYCANMVAGNGPIGAVKFAHVRQSMRNGGGPACLRLRVVLTEEERRAVNPKVMMNDGLYAALTAWAQTHYREELAPGDLGDPALVTESRTALDALTGILGLGSDFYPFQRA 723 ++PARQT QA EA+ RRH L +R V RQSR AI+AGAFHNDVVCVG VLFFHE AFED+A IR+AA+GLFDP+FVEVPD+EVP+ DAITSY+FNSQLL PG DR VL+APSETEET +T YC +V+GN PIG V++A VRQSM+NGGGPACLRLRVVLTE+ER AVNP VMM++ LYA LT WA+ HYREEL+P D+ DP LVTES+ ALDALTGI+GLGSDFYPFQRA Sbjct: 207 RFPARQTRQAAEAIARRHGLDPKRVVIARQSRAAIEAGAFHNDVVCVGNESVLFFHEQAFEDRARTLKEIREAAEGLFDPVFVEVPDSEVPMKDAITSYLFNSQLLTWPGEDRMVLIAPSETEETQTTRDYCERLVSGNAPIGRVEYADVRQSMKNGGGPACLRLRVVLTEDERAAVNPGVMMSEDLYAKLTGWARKHYREELSPDDIADPDLVTESQAALDALTGIMGLGSDFYPFQRA 446
BLAST of mRNA_C-australica_Contig_10182.1.1 vs. uniprot
Match: UPI000380A232 (N-succinylarginine dihydrolase n=1 Tax=Woodsholea maritima TaxID=240237 RepID=UPI000380A232) HSP 1 Score: 347 bits (890), Expect = 1.070e-115 Identity = 170/240 (70.83%), Postives = 195/240 (81.25%), Query Frame = 1 Query: 1 GKYPARQTLQACEAVERRHSLKSERTVHIRQSRKAIDAGAFHNDVVCVGTGPVLFFHEHAFEDKAAAFDAIRKAADGLFDPIFVEVPDAEVPLGDAITSYIFNSQLLIMPGVDRQVLLAPSETEETDSTNLYCANMVAGNGPIGAVKFAHVRQSMRNGGGPACLRLRVVLTEEERRAVNPKVMMNDGLYAALTAWAQTHYREELAPGDLGDPALVTESRTALDALTGILGLGSDFYPFQR 720 G +PARQT Q+CEA+ RRH L +RTV +RQS++AIDAGAFHNDVVCVG GPVLFFHE AFEDKA AI+ AA+ LF+PIFVEVPD+EVPLGDAITSY+FNSQLL P DR VL+AP ETEE ST YC +VAGNGPIG V++A VRQSMRNGGGPACLRLRVVL+EEER VNPK +M++ LY LTAW + YR+EL P DLGDPAL+ E++ ALDALT ILGLG FYPFQR Sbjct: 206 GVFPARQTRQSCEAIARRHGLNPKRTVIVRQSQRAIDAGAFHNDVVCVGNGPVLFFHEFAFEDKAGTLAAIKAAAEDLFEPIFVEVPDSEVPLGDAITSYLFNSQLLSWPDYDRMVLIAPKETEECTSTREYCERLVAGNGPIGDVQYAEVRQSMRNGGGPACLRLRVVLSEEERAGVNPKCLMSETLYQELTAWGEKWYRDELGPNDLGDPALIVEAQGALDALTAILGLGRGFYPFQR 445 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10182.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10182.1.1 >prot_C-australica_Contig_10182.1.1 ID=prot_C-australica_Contig_10182.1.1|Name=mRNA_C-australica_Contig_10182.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=244bp GKYPARQTLQACEAVERRHSLKSERTVHIRQSRKAIDAGAFHNDVVCVGTback to top mRNA from alignment at C-australica_Contig_10182:102..833- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10182.1.1 ID=mRNA_C-australica_Contig_10182.1.1|Name=mRNA_C-australica_Contig_10182.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=732bp|location=Sequence derived from alignment at C-australica_Contig_10182:102..833- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10182:102..833- >mRNA_C-australica_Contig_10182.1.1 ID=mRNA_C-australica_Contig_10182.1.1|Name=mRNA_C-australica_Contig_10182.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=732bp|location=Sequence derived from alignment at C-australica_Contig_10182:102..833- (Chrysoparadoxa australica CS_1217)back to top |