mRNA_C-australica_Contig_10175.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10175.1.1 vs. uniprot
Match: A0A1B6YCL4_9BACT (Alpha-amylase n=6 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A1B6YCL4_9BACT) HSP 1 Score: 567 bits (1462), Expect = 6.730e-202 Identity = 270/278 (97.12%), Postives = 275/278 (98.92%), Query Frame = 1 Query: 1 PAEKPVEKKPSQVVHPEWSKNANIYEVNIRQYSEEGTFKAFQEDLPRLKEMGVKILWLMPIHPIGKINRKETEESRGSYYSVADYKKVNPNFGTEEDFKNLVDAAHEQGFKLIIDWVANHSAWDNPWTENKDWYELTEDGNFMPPRGTDWSDVIQLNYESEEMRAAMLDALEFWVREFDIDGYRCDVAGMVPTDFWENARLELDKIKPVFMLAEDGEPELLHKAFDMNYAWEYAHVIREIAKGEQTFEDLDSLFERDNKRCPDNAYLIYFTSNHDDNS 834 P EKPVEKKPSQVVHPEWSKNANIYEVNIRQYSEEGTFKAFQEDLPRLKEMGVKILWLMPIHPIGKINRKETEESRGSYYSVADYKKVNPNFGTEEDF+NLVDAAHEQGFKLIIDWVANHSAWDNPWTENKDWYELTEDGNFMPPRGTDWSDVIQLNYESEEMRAAMLDALEFWVREFDIDGYRCDVAGMVPTDFWENAR+ELDKIKPVFMLAEDGEPELLHKAFDMNYAWEYAHVIREIAKGEQTFEDLDSLFERD+KR PDNAY +YFTSNHD+NS Sbjct: 21 PTEKPVEKKPSQVVHPEWSKNANIYEVNIRQYSEEGTFKAFQEDLPRLKEMGVKILWLMPIHPIGKINRKETEESRGSYYSVADYKKVNPNFGTEEDFRNLVDAAHEQGFKLIIDWVANHSAWDNPWTENKDWYELTEDGNFMPPRGTDWSDVIQLNYESEEMRAAMLDALEFWVREFDIDGYRCDVAGMVPTDFWENARVELDKIKPVFMLAEDGEPELLHKAFDMNYAWEYAHVIREIAKGEQTFEDLDSLFERDSKRFPDNAYRMYFTSNHDENS 298
BLAST of mRNA_C-australica_Contig_10175.1.1 vs. uniprot
Match: A0A3M8G6L6_9BACT (Alpha-amylase n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8G6L6_9BACT) HSP 1 Score: 431 bits (1109), Expect = 3.430e-148 Identity = 205/268 (76.49%), Postives = 229/268 (85.45%), Query Frame = 1 Query: 31 SQVVHPEWSKNANIYEVNIRQYSEEGTFKAFQEDLPRLKEMGVKILWLMPIHPIGKINRKETEESRGSYYSVADYKKVNPNFGTEEDFKNLVDAAHEQGFKLIIDWVANHSAWDNPWTENKDWYELTEDGNFMPPRGTDWSDVIQLNYESEEMRAAMLDALEFWVREFDIDGYRCDVAGMVPTDFWENARLELDKIKPVFMLAEDGEPELLHKAFDMNYAWEYAHVIREIAKGEQTFEDLDSLFERDNKRCPDNAYLIYFTSNHDDNS 834 S+V HPEWSKNANIYEVNIRQYS EGTF AF+EDLPRLK+MGVKILWLMPI PIG++NRK T GSYYS+ DYK +NP FGTEEDF+ LVD AHE GFK+IIDWVANHS+WDN WTENKDWY L E+GNF PP DWSDVI LNY +E+MRAAM+DAL +WVREFDIDGYRCDVAGMVP DFW +A ELDK+K VFMLAEDGEPELL + FDMNYAW+YAH+IREIAKGEQTFEDLD+LF D +R P N Y +YFTSNHD+NS Sbjct: 33 SKVEHPEWSKNANIYEVNIRQYSPEGTFNAFREDLPRLKDMGVKILWLMPIQPIGELNRKGT---LGSYYSIKDYKGINPEFGTEEDFRALVDEAHEMGFKVIIDWVANHSSWDNAWTENKDWYTLDEEGNFQPPVD-DWSDVIDLNYGNEDMRAAMIDALVYWVREFDIDGYRCDVAGMVPMDFWVDAIAELDKVKDVFMLAEDGEPELLIEVFDMNYAWQYAHIIREIAKGEQTFEDLDALFAEDAERFPSNGYRMYFTSNHDENS 296
BLAST of mRNA_C-australica_Contig_10175.1.1 vs. uniprot
Match: A0A2D7AE71_9BACT (Alpha-amylase n=2 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A2D7AE71_9BACT) HSP 1 Score: 419 bits (1076), Expect = 4.700e-143 Identity = 192/268 (71.64%), Postives = 225/268 (83.96%), Query Frame = 1 Query: 31 SQVVHPEWSKNANIYEVNIRQYSEEGTFKAFQEDLPRLKEMGVKILWLMPIHPIGKINRKETEESRGSYYSVADYKKVNPNFGTEEDFKNLVDAAHEQGFKLIIDWVANHSAWDNPWTENKDWYELTEDGNFMPPRGTDWSDVIQLNYESEEMRAAMLDALEFWVREFDIDGYRCDVAGMVPTDFWENARLELDKIKPVFMLAEDGEPELLHKAFDMNYAWEYAHVIREIAKGEQTFEDLDSLFERDNKRCPDNAYLIYFTSNHDDNS 834 S+V HPEWSKNA IYEVN+RQY+ EGTF AF E LPRLKEMGV ILW MPIHPIGKINRKETE S GSYYSV DYK V+ ++GTEEDF+ +V+ AH G K+I+DWV NH+AWDNPWTENK+WY L E G+F+PP GTDW+DVIQL+Y ++EMRAAM+DA+++WV EF +DGYRCDVAG VPTDFW A ELD++K VFMLAE GEPELL +AFDMNYAWEYAH+IREIAKG TF+ LDSL D K+ PDN+Y +YFTSNHD+NS Sbjct: 40 SKVEHPEWSKNATIYEVNVRQYTPEGTFNAFSEHLPRLKEMGVDILWFMPIHPIGKINRKETERSMGSYYSVHDYKAVSSDYGTEEDFRRMVEQAHGLGMKVILDWVPNHTAWDNPWTENKEWYVLNEVGDFIPPLGTDWTDVIQLDYTNDEMRAAMIDAMKYWVAEFGVDGYRCDVAGKVPTDFWVRAHAELDEVKDVFMLAEXGEPELLIEAFDMNYAWEYAHIIREIAKGAMTFDRLDSLLAEDAKKFPDNSYRMYFTSNHDENS 307
BLAST of mRNA_C-australica_Contig_10175.1.1 vs. uniprot
Match: A0A2E6N5I8_9BACT (Alpha-amylase n=2 Tax=Balneola sp. TaxID=2024824 RepID=A0A2E6N5I8_9BACT) HSP 1 Score: 417 bits (1071), Expect = 1.340e-142 Identity = 188/268 (70.15%), Postives = 224/268 (83.58%), Query Frame = 1 Query: 31 SQVVHPEWSKNANIYEVNIRQYSEEGTFKAFQEDLPRLKEMGVKILWLMPIHPIGKINRKETEESRGSYYSVADYKKVNPNFGTEEDFKNLVDAAHEQGFKLIIDWVANHSAWDNPWTENKDWYELTEDGNFMPPRGTDWSDVIQLNYESEEMRAAMLDALEFWVREFDIDGYRCDVAGMVPTDFWENARLELDKIKPVFMLAEDGEPELLHKAFDMNYAWEYAHVIREIAKGEQTFEDLDSLFERDNKRCPDNAYLIYFTSNHDDNS 834 S+V PEWSKNA IYEVN+RQY+ EGTF AF LPRLKEMGV ILW MPIHPIGK+NRKE E+S GSYYSV DYK V+ ++GTEEDF+ LV+ AH G K+I+DWV NH+AWDNPWTENKDWY L E+G+F+PP GTDW+DVIQLNY +E+MR +M+DA+++WV EF +DGYRCDVAG VPTDFW +ELD++K VFMLAEDGEPELL +AFDMNYAWEYAH+IREIAKG TF+ LDSL D K+ PDN+Y ++FTSNHD+NS Sbjct: 19 SKVTQPEWSKNATIYEVNVRQYTSEGTFNAFSVHLPRLKEMGVDILWFMPIHPIGKVNRKENEDSMGSYYSVQDYKAVSTDYGTEEDFRALVEQAHNLGMKVILDWVPNHTAWDNPWTENKDWYVLNEEGDFIPPLGTDWTDVIQLNYANEDMRTSMIDAMKYWVAEFGVDGYRCDVAGKVPTDFWVRTHIELDEVKDVFMLAEDGEPELLLEAFDMNYAWEYAHIIREIAKGAMTFDRLDSLLVEDAKKFPDNSYRMFFTSNHDENS 286
BLAST of mRNA_C-australica_Contig_10175.1.1 vs. uniprot
Match: A0A2D8CCQ4_9BACT (Alpha-amylase n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CCQ4_9BACT) HSP 1 Score: 415 bits (1067), Expect = 7.830e-142 Identity = 195/266 (73.31%), Postives = 228/266 (85.71%), Query Frame = 1 Query: 37 VVHPEWSKNANIYEVNIRQYSEEGTFKAFQEDLPRLKEMGVKILWLMPIHPIGKINRKETEESRGSYYSVADYKKVNPNFGTEEDFKNLVDAAHEQGFKLIIDWVANHSAWDNPWTENKDWYELTEDGNFMPPRGTDWSDVIQLNYESEEMRAAMLDALEFWVREFDIDGYRCDVAGMVPTDFWENARLELDKIKPVFMLAEDGEPELLHKAFDMNYAWEYAHVIREIAKGEQTFEDLDSLFERDNKRCPDNAYLIYFTSNHDDNS 834 + H EWS+NANIYEVNIRQYSEEGTF AF+EDLPRL+ MGVKILWLMPIHPIG+ NRK GSYYSV DYK VNPNFGTEEDF+ LVD AH G K+IIDWVANH+AWD+PWTEN +WYEL E+GNFMPPRGTDW+DVIQLN+E++EMRAAM+DA+E+WVR+FDIDGYRCDVAGMVP DFW++AR LD+IKPVFMLAED P++ H+AFDM YAW YAH+IREIA G + FE LDSL E + + P++AY +YFTSNHD+NS Sbjct: 35 IQHVEWSQNANIYEVNIRQYSEEGTFNAFREDLPRLEAMGVKILWLMPIHPIGEENRKGP---LGSYYSVQDYKAVNPNFGTEEDFRALVDEAHALGMKVIIDWVANHTAWDSPWTENPEWYELNEEGNFMPPRGTDWTDVIQLNFENQEMRAAMVDAMEYWVRDFDIDGYRCDVAGMVPLDFWKDARASLDEIKPVFMLAEDEGPQM-HEAFDMTYAWTYAHLIREIAAGNEGFEALDSLMEVEATKFPESAYRMYFTSNHDENS 296
BLAST of mRNA_C-australica_Contig_10175.1.1 vs. uniprot
Match: A0A6A8Q737_9BACT (Alpha-amylase n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q737_9BACT) HSP 1 Score: 411 bits (1057), Expect = 2.750e-140 Identity = 193/268 (72.01%), Postives = 225/268 (83.96%), Query Frame = 1 Query: 31 SQVVHPEWSKNANIYEVNIRQYSEEGTFKAFQEDLPRLKEMGVKILWLMPIHPIGKINRKETEESRGSYYSVADYKKVNPNFGTEEDFKNLVDAAHEQGFKLIIDWVANHSAWDNPWTENKDWYELTEDGNFMPPRGTDWSDVIQLNYESEEMRAAMLDALEFWVREFDIDGYRCDVAGMVPTDFWENARLELDKIKPVFMLAEDGEPELLHKAFDMNYAWEYAHVIREIAKGEQTFEDLDSLFERDNKRCPDNAYLIYFTSNHDDNS 834 S V EWSKN++IYE+N+RQYSEEGTF A +EDLPRLK+MGV+ILW MPIHPIG NRK T GSYYSV DYK+V+P +GT+EDF+ VD AHE GFK+IIDWVANH+AWDNPWTENK WY L E+G FMPPRGTDW+DVIQL+YE+EEMRAAM DALE+WVREFDIDGYRCDVAGMVPTDFW++A L++IKPVFMLAEDGEPELL +AF MNYAW+YAHVIREIAKG+Q+ +DL L P ++Y +YFTSNHD+NS Sbjct: 36 SSVEQLEWSKNSSIYEINVRQYSEEGTFDAVREDLPRLKKMGVQILWFMPIHPIGAKNRKGT---LGSYYSVQDYKEVHPAYGTKEDFRRFVDEAHEMGFKVIIDWVANHTAWDNPWTENKSWYVLDEEGGFMPPRGTDWTDVIQLDYENEEMRAAMKDALEYWVREFDIDGYRCDVAGMVPTDFWKDAIASLNEIKPVFMLAEDGEPELLIEAFQMNYAWQYAHVIREIAKGKQSLDDLSKLMAETKANYPPSSYRMYFTSNHDENS 300
BLAST of mRNA_C-australica_Contig_10175.1.1 vs. uniprot
Match: UPI000CD8C958 (alpha-amylase family glycosyl hydrolase n=1 Tax=Gracilimonas amylolytica TaxID=1749045 RepID=UPI000CD8C958) HSP 1 Score: 409 bits (1050), Expect = 3.280e-139 Identity = 192/264 (72.73%), Postives = 224/264 (84.85%), Query Frame = 1 Query: 43 HPEWSKNANIYEVNIRQYSEEGTFKAFQEDLPRLKEMGVKILWLMPIHPIGKINRKETEESRGSYYSVADYKKVNPNFGTEEDFKNLVDAAHEQGFKLIIDWVANHSAWDNPWTENKDWYELTEDGNFMPPRGTDWSDVIQLNYESEEMRAAMLDALEFWVREFDIDGYRCDVAGMVPTDFWENARLELDKIKPVFMLAEDGEPELLHKAFDMNYAWEYAHVIREIAKGEQTFEDLDSLFERDNKRCPDNAYLIYFTSNHDDNS 834 HPEWSK+A+IYEVNIRQYSEEGTF AF++DLPRL+ MGV ILWLMPIHPIG+ NRK GSYYSV DYK VNPNFGTEEDFK LV AH+ G K+IIDWVANH+AWD+PWTENKDWYEL E+GNF+PPRGTDW+DVIQL+YE++EMRAAM DA+E+WVREF +DGYRCDVAGMVP DFW++ R +LD+IKPVFMLAED PE+ H+AFDM YAW YAHVIREIA G F LDSL E + + P++AY +YFT+NHD+NS Sbjct: 40 HPEWSKDASIYEVNIRQYSEEGTFNAFRKDLPRLEAMGVDILWLMPIHPIGEKNRKGP---LGSYYSVQDYKAVNPNFGTEEDFKALVSEAHDLGMKVIIDWVANHTAWDSPWTENKDWYELDENGNFIPPRGTDWTDVIQLDYENQEMRAAMTDAMEYWVREFGVDGYRCDVAGMVPLDFWKDVRTKLDEIKPVFMLAEDEGPEM-HEAFDMTYAWTYAHVIREIAAGNDDFGTLDSLMEVEETKFPESAYRMYFTTNHDENS 299
BLAST of mRNA_C-australica_Contig_10175.1.1 vs. uniprot
Match: A0A2D9FT05_9BACT (Alpha-amylase n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D9FT05_9BACT) HSP 1 Score: 404 bits (1038), Expect = 2.090e-137 Identity = 190/266 (71.43%), Postives = 218/266 (81.95%), Query Frame = 1 Query: 37 VVHPEWSKNANIYEVNIRQYSEEGTFKAFQEDLPRLKEMGVKILWLMPIHPIGKINRKETEESRGSYYSVADYKKVNPNFGTEEDFKNLVDAAHEQGFKLIIDWVANHSAWDNPWTENKDWYELTEDGNFMPPRGTDWSDVIQLNYESEEMRAAMLDALEFWVREFDIDGYRCDVAGMVPTDFWENARLELDKIKPVFMLAEDGEPELLHKAFDMNYAWEYAHVIREIAKGEQTFEDLDSLFERDNKRCPDNAYLIYFTSNHDDNS 834 V HPEWSKNANIYEVNIRQYSEEGTF+AFQEDLPRL+ MGVKILWLMPIHPIG+ NRK GSYYSV DYK +NPN+GTEEDF+ LVD HE+ K+IIDWVANH++WDNPWTEN +W+EL E+GNFMPPRGTDW+DV+QL+Y + EMR AM DALE+WVR+FDIDGYR DVAGMVP DFW AR LD IKPVFMLAED P + +AFDM YAW YAH+IREIA G + LDSL E + + P+NAY +YFTSNHD+NS Sbjct: 36 VEHPEWSKNANIYEVNIRQYSEEGTFEAFQEDLPRLEAMGVKILWLMPIHPIGEKNRKGP---LGSYYSVQDYKGINPNYGTEEDFRALVDEVHERDMKIIIDWVANHTSWDNPWTENPEWFELNEEGNFMPPRGTDWTDVVQLDYTNNEMREAMHDALEYWVRDFDIDGYRADVAGMVPIDFWNEARERLDAIKPVFMLAEDEGPVMHEEAFDMTYAWTYAHLIREIAAGNEEITVLDSLMEVEETKFPENAYRMYFTSNHDENS 298
BLAST of mRNA_C-australica_Contig_10175.1.1 vs. uniprot
Match: A0A521DVW6_9BACT (Glycosidase n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521DVW6_9BACT) HSP 1 Score: 399 bits (1025), Expect = 1.960e-135 Identity = 188/268 (70.15%), Postives = 220/268 (82.09%), Query Frame = 1 Query: 31 SQVVHPEWSKNANIYEVNIRQYSEEGTFKAFQEDLPRLKEMGVKILWLMPIHPIGKINRKETEESRGSYYSVADYKKVNPNFGTEEDFKNLVDAAHEQGFKLIIDWVANHSAWDNPWTENKDWYELTEDGNFMPPRGTDWSDVIQLNYESEEMRAAMLDALEFWVREFDIDGYRCDVAGMVPTDFWENARLELDKIKPVFMLAEDGEPELLHKAFDMNYAWEYAHVIREIAKGEQTFEDLDSLFERDNKRCPDNAYLIYFTSNHDDNS 834 S+V EWSKNA+IYE+N+RQYSEEGTF A +EDLPRL+EMGV+ILWLMPIHPIG+ NRK GSYYSV DYK +NP FG + DF VD AH+ GFK+IIDWVANH+AW +PWTEN +WY L EDGNF PP GTDW+DVIQLNYE+EEMRAAM+DALE+WVR+F+IDGYRCDVAGMVPTDFW A L++IKPVFMLAEDGEPELL +AF MNYAW+YAH IREIAK EQ+ +DL +L E P ++Y +YFTSNHD+NS Sbjct: 37 SKVEQLEWSKNASIYEINVRQYSEEGTFDAVREDLPRLREMGVRILWLMPIHPIGEKNRKGP---LGSYYSVKDYKGINPEFGDKADFARFVDEAHQLGFKVIIDWVANHTAWGHPWTENPEWYALDEDGNFTPPTGTDWTDVIQLNYENEEMRAAMIDALEYWVRDFNIDGYRCDVAGMVPTDFWVEAIDSLNQIKPVFMLAEDGEPELLIEAFQMNYAWQYAHTIREIAKEEQSLDDLTALMEETEANFPSSSYRMYFTSNHDENS 301
BLAST of mRNA_C-australica_Contig_10175.1.1 vs. uniprot
Match: UPI00036C4EA8 (alpha-amylase family glycosyl hydrolase n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI00036C4EA8) HSP 1 Score: 398 bits (1023), Expect = 3.810e-135 Identity = 185/268 (69.03%), Postives = 220/268 (82.09%), Query Frame = 1 Query: 31 SQVVHPEWSKNANIYEVNIRQYSEEGTFKAFQEDLPRLKEMGVKILWLMPIHPIGKINRKETEESRGSYYSVADYKKVNPNFGTEEDFKNLVDAAHEQGFKLIIDWVANHSAWDNPWTENKDWYELTEDGNFMPPRGTDWSDVIQLNYESEEMRAAMLDALEFWVREFDIDGYRCDVAGMVPTDFWENARLELDKIKPVFMLAEDGEPELLHKAFDMNYAWEYAHVIREIAKGEQTFEDLDSLFERDNKRCPDNAYLIYFTSNHDDNS 834 S+V EWSKN++IYE+N+RQYSEEGTF A +EDLPR++EMGV+ILWLMPIHPIG+ NRK GSYYSV +Y +VNP FG + DF VD AH+ GFK+IIDWVANH+AWDNPWT+N +WYEL E+GNF PP GTDW+DVIQL+YE+EEMRAAM++ALE+WVR+F+IDGYR DVAGMVPTDFW A+ LD IKPVFMLAEDGEPELL +AF MNYAW+YAH IREIA G QTF DLDSL + P +Y +YFT+NHD+NS Sbjct: 34 SKVEQLEWSKNSSIYEINVRQYSEEGTFDAVREDLPRIREMGVRILWLMPIHPIGEKNRKGP---LGSYYSVQNYTEVNPEFGNKADFLRFVDEAHQLGFKVIIDWVANHTAWDNPWTQNPEWYELDEEGNFTPPHGTDWTDVIQLDYENEEMRAAMIEALEYWVRDFNIDGYRADVAGMVPTDFWVEAKDSLDSIKPVFMLAEDGEPELLIEAFQMNYAWQYAHTIREIADGNQTFADLDSLMQETEANFPQTSYRMYFTTNHDENS 298 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10175.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10175.1.1 >prot_C-australica_Contig_10175.1.1 ID=prot_C-australica_Contig_10175.1.1|Name=mRNA_C-australica_Contig_10175.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=278bp PAEKPVEKKPSQVVHPEWSKNANIYEVNIRQYSEEGTFKAFQEDLPRLKEback to top mRNA from alignment at C-australica_Contig_10175:2..835+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10175.1.1 ID=mRNA_C-australica_Contig_10175.1.1|Name=mRNA_C-australica_Contig_10175.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=834bp|location=Sequence derived from alignment at C-australica_Contig_10175:2..835+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10175:2..835+ >mRNA_C-australica_Contig_10175.1.1 ID=mRNA_C-australica_Contig_10175.1.1|Name=mRNA_C-australica_Contig_10175.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=834bp|location=Sequence derived from alignment at C-australica_Contig_10175:2..835+ (Chrysoparadoxa australica CS_1217)back to top |