mRNA_C-australica_Contig_10173.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10173.1.1 vs. uniprot
Match: UPI001E5B1AE6 (DNA translocase FtsK n=1 Tax=Seohaeicola saemankumensis TaxID=481181 RepID=UPI001E5B1AE6) HSP 1 Score: 395 bits (1014), Expect = 6.910e-128 Identity = 205/225 (91.11%), Postives = 218/225 (96.89%), Query Frame = 1 Query: 7 IPVAQPRSVVQHPPRKPVQPSTRARAEAQPALKFDEDDTAYELPPLSLLSNPALIQRHHLSDEALEQNARMLESVLDDYGVKGDIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMAALSARVSTVPGRSVIGIELPNENREKVVLREILAARDFGDSNMRLPLALGKDIGGDPVVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPEECRLIMI 681 IPVAQPRSVVQ+P RKP+QPSTRA+AEAQP LKFD + YELPPL+LLSNP+LI RHHLSDEALEQNARMLESVLDDYGVKGDIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSM+ALSARVSTVPGR+VIGIELPNENREKVVLREIL+ARD+GDSNM+LPLALGKDIGGDP+VANLAKMPHLLIAGTTGSGKSVAINTMILSLLY+LTPEECRLIMI Sbjct: 497 IPVAQPRSVVQNPVRKPLQPSTRAKAEAQPTLKFDASEAVYELPPLALLSNPSLITRHHLSDEALEQNARMLESVLDDYGVKGDIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMSALSARVSTVPGRTVIGIELPNENREKVVLREILSARDYGDSNMKLPLALGKDIGGDPMVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYRLTPEECRLIMI 721
BLAST of mRNA_C-australica_Contig_10173.1.1 vs. uniprot
Match: A0A7C9HBK0_9RHOB (DNA translocase FtsK n=2 Tax=Sediminimonas qiaohouensis TaxID=552061 RepID=A0A7C9HBK0_9RHOB) HSP 1 Score: 388 bits (996), Expect = 2.750e-126 Identity = 200/225 (88.89%), Postives = 217/225 (96.44%), Query Frame = 1 Query: 7 IPVAQPRSVVQHPPRKPVQPSTRARAEAQPALKFDEDDTAYELPPLSLLSNPALIQRHHLSDEALEQNARMLESVLDDYGVKGDIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMAALSARVSTVPGRSVIGIELPNENREKVVLREILAARDFGDSNMRLPLALGKDIGGDPVVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPEECRLIMI 681 IPVA+PR VVQH RKPVQPSTRA+AEAQPAL+F+E +ELPPL+LLSNPA IQRHHLSDEALE+NARMLE+VLDDYGVKG+IVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSM+ALSARVSTVPGRSVIGIELPNENREKVVLREIL+ARD+GDSNM+LPLALGKDIGGDP+VANL+KMPHLLIAGTTGSGKSVAINTMILSLLY+LTP+ECRLIMI Sbjct: 385 IPVAEPRKVVQHAARKPVQPSTRAKAEAQPALQFEETGAEFELPPLNLLSNPATIQRHHLSDEALEENARMLETVLDDYGVKGEIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMSALSARVSTVPGRSVIGIELPNENREKVVLREILSARDYGDSNMKLPLALGKDIGGDPIVANLSKMPHLLIAGTTGSGKSVAINTMILSLLYRLTPDECRLIMI 609
BLAST of mRNA_C-australica_Contig_10173.1.1 vs. uniprot
Match: A0A7Y2GC36_9RHOB (DNA translocase FtsK (Fragment) n=1 Tax=Sulfitobacter sp. TaxID=1903071 RepID=A0A7Y2GC36_9RHOB) HSP 1 Score: 379 bits (973), Expect = 1.370e-124 Identity = 201/225 (89.33%), Postives = 210/225 (93.33%), Query Frame = 1 Query: 7 IPVAQPRSVVQHPPRKPVQPSTRARAEAQPALKFDEDDTAYELPPLSLLSNPALIQRHHLSDEALEQNARMLESVLDDYGVKGDIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMAALSARVSTVPGRSVIGIELPNENREKVVLREILAARDFGDSNMRLPLALGKDIGGDPVVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPEECRLIMI 681 IPVA+PR VVQ P RK VQPS +ARAEAQP L F++ +ELPPLSLL NP IQR HLSDEALE+NARMLESVLDDYGVKG+IV+VRPGPVVTMYELEPAPGLKASRVIGLADDIARSMAALSARVSTVPGRSVIGIELPNENREKVVLREIL+ARDFGDSNMRLPLALGKDIGGDPVVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPEECRLIMI Sbjct: 420 IPVAEPRKVVQQPSRKTVQPSRQARAEAQPTLSFEDTHPGFELPPLSLLENPDQIQRLHLSDEALEENARMLESVLDDYGVKGEIVAVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMAALSARVSTVPGRSVIGIELPNENREKVVLREILSARDFGDSNMRLPLALGKDIGGDPVVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPEECRLIMI 644
BLAST of mRNA_C-australica_Contig_10173.1.1 vs. uniprot
Match: A0A1B6YLA6_9RHOB (DNA translocase FtsK n=1 Tax=Rhodobacteraceae bacterium EhC02 TaxID=1849170 RepID=A0A1B6YLA6_9RHOB) HSP 1 Score: 386 bits (991), Expect = 1.610e-124 Identity = 199/207 (96.14%), Postives = 206/207 (99.52%), Query Frame = 1 Query: 61 QPSTRARAEAQPALKFDEDDTAYELPPLSLLSNPALIQRHHLSDEALEQNARMLESVLDDYGVKGDIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMAALSARVSTVPGRSVIGIELPNENREKVVLREILAARDFGDSNMRLPLALGKDIGGDPVVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPEECRLIMI 681 QPSTRARAEAQP LKFDEDDTAYELPPLSLLSNPALIQRHHLSDEALEQNARMLESVLDDYGVKGDIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSM+ALSARVSTVPGR+VIGIELPNENREKVVLREIL+ARD+GDSNM+LPLALGKDIGGDP+VANLAKMPHLLIAGTTGSGKSVAINTMILSLLY+LTPEECRLIMI Sbjct: 512 QPSTRARAEAQPTLKFDEDDTAYELPPLSLLSNPALIQRHHLSDEALEQNARMLESVLDDYGVKGDIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMSALSARVSTVPGRTVIGIELPNENREKVVLREILSARDYGDSNMKLPLALGKDIGGDPIVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYRLTPEECRLIMI 718
BLAST of mRNA_C-australica_Contig_10173.1.1 vs. uniprot
Match: UPI001BD1CB13 (DNA translocase FtsK 4TM domain-containing protein n=1 Tax=Pseudohalocynthiibacter TaxID=1759417 RepID=UPI001BD1CB13) HSP 1 Score: 383 bits (983), Expect = 3.330e-124 Identity = 198/225 (88.00%), Postives = 213/225 (94.67%), Query Frame = 1 Query: 7 IPVAQPRSVVQHPPRKPVQPSTRARAEAQPALKFDEDDTAYELPPLSLLSNPALIQRHHLSDEALEQNARMLESVLDDYGVKGDIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMAALSARVSTVPGRSVIGIELPNENREKVVLREILAARDFGDSNMRLPLALGKDIGGDPVVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPEECRLIMI 681 IP A PRSVVQH P+K VQPS +ARAEAQP L+F+E AYE PPLSLL+NP +++RHHLSDEALE+NARMLESVLDDYGVKG+IVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSM+ALSARVSTVPGRSVIGIELPN NREKVVLREIL+ARDFGDSNMRLPLALGKDIGGDP+VANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKL+PEECR+IMI Sbjct: 400 IPTAPPRSVVQHAPKKAVQPSRKARAEAQPNLQFEESHAAYETPPLSLLTNPVIVERHHLSDEALEENARMLESVLDDYGVKGEIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMSALSARVSTVPGRSVIGIELPNVNREKVVLREILSARDFGDSNMRLPLALGKDIGGDPIVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLSPEECRMIMI 624
BLAST of mRNA_C-australica_Contig_10173.1.1 vs. uniprot
Match: A0A6L8LGQ5_9RHOB (DNA translocase FtsK n=2 Tax=Thalassobius TaxID=335927 RepID=A0A6L8LGQ5_9RHOB) HSP 1 Score: 384 bits (986), Expect = 5.400e-124 Identity = 201/226 (88.94%), Postives = 216/226 (95.58%), Query Frame = 1 Query: 7 IPVAQPRSVVQHPPRKPVQPSTRARAEAQPALKFDEDDTA-YELPPLSLLSNPALIQRHHLSDEALEQNARMLESVLDDYGVKGDIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMAALSARVSTVPGRSVIGIELPNENREKVVLREILAARDFGDSNMRLPLALGKDIGGDPVVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPEECRLIMI 681 IP +PR VVQH RKPVQPSTRA+AEAQP+L+FDE + YELPPLSLL+NP LIQRHHLSDEALE+NARMLE+VLDDYGVKG+IVSVRPGPVVTMYELEPAPGLKASRVIGL+DDIARSM+ALSARVSTVPGRSVIGIELPNENREKVVLREILAARDFGDSNM+LPLALGKDIGGDP+VANLAKMPHLLIAGTTGSGKSVAINTMILSLLY+LTPE+CRLIMI Sbjct: 470 IPTPEPRKVVQHLNRKPVQPSTRAKAEAQPSLQFDESNRPHYELPPLSLLTNPTLIQRHHLSDEALEENARMLENVLDDYGVKGEIVSVRPGPVVTMYELEPAPGLKASRVIGLSDDIARSMSALSARVSTVPGRSVIGIELPNENREKVVLREILAARDFGDSNMKLPLALGKDIGGDPIVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYRLTPEDCRLIMI 695
BLAST of mRNA_C-australica_Contig_10173.1.1 vs. uniprot
Match: A0A2E3UBS8_9RHOB (DNA translocase FtsK n=2 Tax=Actibacterium TaxID=1433986 RepID=A0A2E3UBS8_9RHOB) HSP 1 Score: 382 bits (980), Expect = 1.110e-123 Identity = 199/226 (88.05%), Postives = 216/226 (95.58%), Query Frame = 1 Query: 7 IPVAQPRSVVQHPPRKPVQPSTRARAEAQPALKFDEDDTA-YELPPLSLLSNPALIQRHHLSDEALEQNARMLESVLDDYGVKGDIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMAALSARVSTVPGRSVIGIELPNENREKVVLREILAARDFGDSNMRLPLALGKDIGGDPVVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPEECRLIMI 681 +PVAQPR VVQHPP+KP QPS +ARAEAQPAL+FD+ ++ YE PPLSLL++P ++RHHLSDEALE+NARMLE+VLDDYGVKG+IVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSM+ALSARVSTVPGRSVIGIELPN NREKVVLREIL+ARDFGDSNMRLPLALGKDIGGDPVVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKL+PEECRLIMI Sbjct: 407 LPVAQPRKVVQHPPKKPAQPSRQARAEAQPALRFDDQASSEYEHPPLSLLTSPVSVERHHLSDEALEENARMLENVLDDYGVKGEIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMSALSARVSTVPGRSVIGIELPNVNREKVVLREILSARDFGDSNMRLPLALGKDIGGDPVVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLSPEECRLIMI 632
BLAST of mRNA_C-australica_Contig_10173.1.1 vs. uniprot
Match: UPI001CBBF780 (DNA translocase FtsK 4TM domain-containing protein n=1 Tax=Tateyamaria pelophila TaxID=328415 RepID=UPI001CBBF780) HSP 1 Score: 382 bits (980), Expect = 1.180e-123 Identity = 198/225 (88.00%), Postives = 214/225 (95.11%), Query Frame = 1 Query: 7 IPVAQPRSVVQHPPRKPVQPSTRARAEAQPALKFDEDDTAYELPPLSLLSNPALIQRHHLSDEALEQNARMLESVLDDYGVKGDIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMAALSARVSTVPGRSVIGIELPNENREKVVLREILAARDFGDSNMRLPLALGKDIGGDPVVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPEECRLIMI 681 IPVA+PR VVQ P RKPVQPSTRA+AEAQPAL+F++ +ELPPL+LL NP +QRHHLSD+ALE+NARMLE+VLDDYGVKG+IV+VRPGPVVTMYELEPAPGLKASRVIGLADDIARSMAALSARVSTVPGRSVIGIELPNENREKVVLREIL++RDFGDSNMRLPLALGKDIGGD VVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTP+ECRLIMI Sbjct: 411 IPVAEPRKVVQQPVRKPVQPSTRAKAEAQPALRFEDTHPGFELPPLNLLENPIEVQRHHLSDDALEENARMLENVLDDYGVKGEIVAVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMAALSARVSTVPGRSVIGIELPNENREKVVLREILSSRDFGDSNMRLPLALGKDIGGDSVVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPQECRLIMI 635
BLAST of mRNA_C-australica_Contig_10173.1.1 vs. uniprot
Match: A0A6P0CBI9_9RHOB (DNA translocase FtsK n=1 Tax=Sulfitobacter sediminilitoris TaxID=2698830 RepID=A0A6P0CBI9_9RHOB) HSP 1 Score: 382 bits (980), Expect = 1.460e-123 Identity = 200/226 (88.50%), Postives = 213/226 (94.25%), Query Frame = 1 Query: 4 PIPVAQPRSVVQHPPRKPVQPSTRARAEAQPALKFDEDDTAYELPPLSLLSNPALIQRHHLSDEALEQNARMLESVLDDYGVKGDIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMAALSARVSTVPGRSVIGIELPNENREKVVLREILAARDFGDSNMRLPLALGKDIGGDPVVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPEECRLIMI 681 PIPVA+PR++VQ P RKPVQPS +A+AEAQP L F+E +ELPPL+LL NP IQR HLSDEALE+NARMLESVLDDYGVKG+IV+VRPGPVVTMYELEPAPGLKASRVIGLADDIARSMAALSARVSTVPGRSVIGIELPNENREKVVLREIL+ARDFGDSNMRLPLALGKDIGGDPVVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTP+ECRLIMI Sbjct: 420 PIPVAEPRNIVQQPTRKPVQPSKQAKAEAQPTLSFEETHPGFELPPLNLLENPEEIQRLHLSDEALEENARMLESVLDDYGVKGEIVAVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMAALSARVSTVPGRSVIGIELPNENREKVVLREILSARDFGDSNMRLPLALGKDIGGDPVVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPQECRLIMI 645
BLAST of mRNA_C-australica_Contig_10173.1.1 vs. uniprot
Match: A0A5B9ET35_9RHOB (DNA translocase FtsK n=1 Tax=Octadecabacter sp. SW4 TaxID=2602067 RepID=A0A5B9ET35_9RHOB) HSP 1 Score: 380 bits (976), Expect = 6.090e-123 Identity = 196/221 (88.69%), Postives = 211/221 (95.48%), Query Frame = 1 Query: 19 QPRSVVQHPPRKPVQPSTRARAEAQPALKFDEDDTAYELPPLSLLSNPALIQRHHLSDEALEQNARMLESVLDDYGVKGDIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMAALSARVSTVPGRSVIGIELPNENREKVVLREILAARDFGDSNMRLPLALGKDIGGDPVVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPEECRLIMI 681 +PR VVQHP +KPVQPS +ARAEAQPAL+F+E AYE+PPL LLS+P ++RHHLSD+ALE+NARMLESVLDDYGVKG+IVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSM+ALSARVSTVPGRSVIGIELPNENRE VVLREIL+ARDFGDSNMRLPLALGKDIGGDP+VANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPEECRLIMI Sbjct: 428 EPRKVVQHPVKKPVQPSQKARAEAQPALQFEEKRVAYEIPPLGLLSSPETVERHHLSDDALEENARMLESVLDDYGVKGEIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMSALSARVSTVPGRSVIGIELPNENREMVVLREILSARDFGDSNMRLPLALGKDIGGDPIVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPEECRLIMI 648 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10173.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10173.1.1 >prot_C-australica_Contig_10173.1.1 ID=prot_C-australica_Contig_10173.1.1|Name=mRNA_C-australica_Contig_10173.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=227bp MPIPVAQPRSVVQHPPRKPVQPSTRARAEAQPALKFDEDDTAYELPPLSLback to top mRNA from alignment at C-australica_Contig_10173:39..719+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10173.1.1 ID=mRNA_C-australica_Contig_10173.1.1|Name=mRNA_C-australica_Contig_10173.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=681bp|location=Sequence derived from alignment at C-australica_Contig_10173:39..719+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10173:39..719+ >mRNA_C-australica_Contig_10173.1.1 ID=mRNA_C-australica_Contig_10173.1.1|Name=mRNA_C-australica_Contig_10173.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=681bp|location=Sequence derived from alignment at C-australica_Contig_10173:39..719+ (Chrysoparadoxa australica CS_1217)back to top |