mRNA_C-australica_Contig_10158.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: UPI00146165D3 (GAF domain-containing protein n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI00146165D3) HSP 1 Score: 530 bits (1365), Expect = 2.980e-188 Identity = 274/278 (98.56%), Postives = 276/278 (99.28%), Query Frame = 1 Query: 1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIGLSAFL 834 LSI TGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFED PKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMD+GVIS+AIKKDEGDKVLVSVSDNGIGLSAFL Sbjct: 51 LSIPTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDLPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDKGVISVAIKKDEGDKVLVSVSDNGIGLSAFL 328
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: A0A3D4UUL8_9BACT (GAF domain-containing protein n=4 Tax=Balneola sp. TaxID=2024824 RepID=A0A3D4UUL8_9BACT) HSP 1 Score: 380 bits (977), Expect = 3.440e-129 Identity = 186/278 (66.91%), Postives = 231/278 (83.09%), Query Frame = 1 Query: 1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIGLSAFL 834 LS+ TGPVKD+IKG +IPR+KGVAGWVL+N+KPYLVNDM+ S+EF+GDIS+ FTTRNM+CVPMFDS N A+GIMQALNKK G+DF EKDI L TL+ HA+LSIEK +EVD LKN I +K+ RLKE+H+GFEN+L+AL+A VQLQ +L+D + +F+MKSTG+RIE IA AHEVLF ++ + +D+GFYL HLT +I IF DF KDI Y+ DIDK+ LK ALTVGLI+ EVILNM+REAF G D+G ISIA+KKD GDKVL+S+SDNG G+S +L Sbjct: 58 LSVPTGPVKDEIKGQIIPRDKGVAGWVLRNRKPYLVNDMANSKEFFGDISKGFTTRNMVCVPMFDSTNGAIGIMQALNKKNGEDFTEKDIPVLETLSAHAALSIEKAKEVDELKNTIKDKEVRLKEIHRGFENSLSALNALVQLQVPLLTDENAKFLMKSTGSRIETIAHAHEVLFNSEDNELIDVGFYLGHLTSTIVEIFGDFDKDISYNLDIDKIELKASTALTVGLIINEVILNMYREAFIGYDKGKISIAVKKDGGDKVLISISDNGNGISEYL 335
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: A0A1B6Y9U5_9BACT (GAF domain-containing protein n=1 Tax=Balneola sp. EhC07 TaxID=1849360 RepID=A0A1B6Y9U5_9BACT) HSP 1 Score: 368 bits (944), Expect = 3.620e-124 Identity = 178/278 (64.03%), Postives = 228/278 (82.01%), Query Frame = 1 Query: 1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIGLSAFL 834 LS+ TGPV+D++KG +IPR+KGVAGWVLKN+KPYLVNDM++S+EF+GDIS+ F TRNMICVPMFDS N +GIMQALNKK ++F EKDI L TLA HA+LSIEK +EVD LKN I +K+ RLKE+H+GFEN+L+AL+A VQLQ +LSD + +F+MKSTG+RIE IA AH++LF ++ + +D+GFYL HLT +I IF D+ KDI Y+ DIDK+ LK ALT GLI+ EVILNM+R+AF G D+G I+IA+KKD GDKVL+S+SDNG G+S +L Sbjct: 58 LSVPTGPVRDEVKGQIIPRDKGVAGWVLKNEKPYLVNDMAKSKEFFGDISKGFKTRNMICVPMFDSKNNVIGIMQALNKKESREFAEKDIPVLETLAAHAALSIEKAKEVDDLKNTIKDKEHRLKEVHQGFENSLSALNALVQLQVPLLSDENAKFLMKSTGSRIETIAHAHKILFNSEDNELIDVGFYLGHLTSTIVEIFGDYDKDISYNLDIDKIELKASTALTAGLIINEVILNMYRDAFIGYDKGKIAIAVKKDGGDKVLISISDNGNGISEYL 335
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: A0A3D1GDK5_9BACT (GAF domain-containing protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1GDK5_9BACT) HSP 1 Score: 297 bits (761), Expect = 1.470e-96 Identity = 147/278 (52.88%), Postives = 205/278 (73.74%), Query Frame = 1 Query: 1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIGLSAFL 834 +SI TGPVKD+IKGM IPR+KG+AGWVLKNKKP++ N +S+ F GD+S +F TRN++CVP+ +S +EA+G++Q LNK G+DF E++I TLAGH +LSIEKV+EVD LK +I +K+ RLKE+H+G ++NL A++A +QL+ L+D +F++K+TG+RIE IA AH VL+ D + +DLG YL LT +S IFED D+ D DK+ +K+ ALTVGLIV EV++ MF+EAF G +S+A+KKDEG+ V +S+SD+G GL L Sbjct: 58 VSIPTGPVKDKIKGMSIPRDKGIAGWVLKNKKPFISNVPKDSDIFLGDLSTEFETRNILCVPLINSKDEAIGVIQVLNKNEGQDFTEENIPVFETLAGHIALSIEKVKEVDELKKQIKDKENRLKEVHQGLKSNLAAINALIQLEVPELADEQAKFILKATGSRIETIANAHHVLYNQDEFEYLDLGKYLGRLTGMVSEIFEDPEYDVSLMLDFDKIAIKSSVALTVGLIVNEVLVYMFKEAFAERGYGKVSLAVKKDEGNAVAISISDDGNGLQTIL 335
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: A0A3M8G098_9BACT (GAF domain-containing protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8G098_9BACT) HSP 1 Score: 287 bits (734), Expect = 1.770e-92 Identity = 138/278 (49.64%), Postives = 202/278 (72.66%), Query Frame = 1 Query: 1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIGLSAFL 834 +SI TGP+KD+I GM IP++KGVAGWVL+NK+PY+ N + S+ F+ D+S +F TRN++C+P+ +S EA+G++Q LN++GGKDF E+ I TLAGH +LSIEKV+EVD LK +I EK+E+LKE+H+G ++NL A++A VQL+ + + F+MK+TG RIEAIA AH +L+ + + +DLG YL LT + IFE K+I D+DK+ LK ALTVGLI EV+++M+ +AF G I++ +KKDE + V++S+SD+G GL++ L Sbjct: 58 VSIPTGPIKDKITGMTIPKDKGVAGWVLQNKQPYISNSLGNSDIFWKDLSSEFNTRNIVCLPLLNSREEAIGVIQVLNREGGKDFKEEQIPIFETLAGHIALSIEKVKEVDDLKKKIKEKEEKLKEVHQGLKSNLGAINALVQLEIPNVENDHARFVMKATGTRIEAIANAHHILYNQEEFEYIDLGLYLGRLTSMTTEIFESEEKEISLLLDMDKIALKASVALTVGLITNEVLIHMYNDAFENSSYGKIALGVKKDEQNCVVISISDDGNGLNSIL 335
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: A0A6M1T3S9_9BACT (GAF domain-containing protein n=1 Tax=Balneolaceae bacterium YR4-1 TaxID=2709311 RepID=A0A6M1T3S9_9BACT) HSP 1 Score: 233 bits (595), Expect = 2.250e-71 Identity = 108/274 (39.42%), Postives = 184/274 (67.15%), Query Frame = 1 Query: 1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIGL 822 +S+ TGPVKD+IKG IP+NKGV GWV++NK+PYL ND+ SE F+G+++E+F TRN+ICVP+ DS N A+G++QA+NK+G +DF DI LA H S++IE+ + + +K+ I +K+ L E+H +NNL +S ++++ + D ++K+T +R++++ + H++L K EV+LG YLS+LTE IS + ++ + + D +H+ D A+ GL++ E+++N+++ AF + +G I+I + + +K+ + V DNGIG+ Sbjct: 73 ISLPTGPVKDEIKGKRIPKNKGVGGWVIENKRPYLSNDLENSEIFFGEVAEEFQTRNIICVPLIDSKNNAMGVLQAINKRGLQDFTPHDIPVFQALASHVSMAIERTRMEERMKSRIKQKEVLLTEIHHRVKNNLATISGLIEMELDTVGDKHARHVLKNTYSRMQSMGEVHDMLCKKGLFDEVELGMYLSNLTEKISKTLSNPNTEVNITVEADTIHMAADRAMICGLVLNELLVNIYKHAFEDLKEGNITINLLALKDNKIQLDVRDNGIGI 346
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: A0A6A8Q5L0_9BACT (GAF domain-containing protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q5L0_9BACT) HSP 1 Score: 224 bits (571), Expect = 8.210e-68 Identity = 103/278 (37.05%), Postives = 188/278 (67.63%), Query Frame = 1 Query: 1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIGLSAFL 834 +SI TGPV++ I+G+ IP+NKG+ GWVL++ KPY ND+S+SE F+ D+++DFT++N+ICVP+ S+ + G++QA+N+K G DF EKD+ LA H S++I++ + + + + +++ +L E+H +NNL +S +QL LS+ + ++K TG+RI +++ H +L+ E++LG Y+ + ++I +IF + K+I + D+D++ ++ + A+T GLI+ E+++N ++ AF GM++G I + ++ + V ++VSDNGIG+ + L Sbjct: 64 VSIPTGPVQENIEGISIPKNKGIGGWVLRHNKPYFCNDISKSELFWKDLTDDFTSQNIICVPLCVSSGKPFGVIQAVNRKSGGDFIEKDVIVFEALAMHISIAIDRARNYEEMLKRLEDREIQLSEIHHRLKNNLATISGLIQLDLADLSEENCRDLLKVTGSRIRSVSDVHSLLYDQKDLGELELGNYIQRVAQNIKHIFSEPVKEISITTDLDEIQIEANRAMTAGLIINELLINGYKHAFEGMEKGEIGLQLRDIGDNTVKITVSDNGIGMKSIL 341
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: A0A2D8CJ87_9BACT (Histidine kinase domain-containing protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2D8CJ87_9BACT) HSP 1 Score: 221 bits (562), Expect = 1.550e-66 Identity = 101/275 (36.73%), Postives = 181/275 (65.82%), Query Frame = 1 Query: 1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIGLS 825 +SI TGPVKD+I GM +P++KG+ GWV+ +P++ ND+ ES+ F+ D+S FTTRN+ICVP+ DS A G++QA+NKKGGK F +D+ +LA H S +IE+ + D ++ ++ E+D ++ E+H +NNL+ + ++ + + D ++ ST +RI ++A+AH +L+ ++++L YL+ + +++ +F+ KDIR + ++++ L + ++ GLI+ E+++N ++ AFT + G I I++KK DK+ + V+D+GIG S Sbjct: 62 VSIPTGPVKDEIMGMRVPKSKGIGGWVISYNQPFISNDVVESDIFWKDLSTGFTTRNIICVPLQDSKGNAFGVLQAINKKGGKSFENEDVPVFESLALHVSSAIERSKRYDEIEEKLKERDMQMMEIHHRLKNNLSMICGLLEFDLRDVKDEKYRDLLSSTNSRIRSVAEAHSLLYDQRDSEKLELSRYLTAIAQNVEKVFDTSEKDIRLNIQLEEITLDPNRSMLCGLILNELLINAYKHAFTKKNTGEIVISLKKTSKDKIALIVTDDGIGFS 336
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: UPI000369A130 (GAF domain-containing protein n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI000369A130) HSP 1 Score: 218 bits (556), Expect = 1.040e-65 Identity = 105/273 (38.46%), Postives = 178/273 (65.20%), Query Frame = 1 Query: 1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIG 819 +SI TGPVKD++KGM IP+NKG+ GWV+ +P++ ND+ ES+ F+ D+S FTTRN+ICVP+ +S EA G+MQA+NKK GK F +D+ A H + +IE+ ++ D L+N++++++ +L E+H +NNL +SA ++ + + D + ++ +T +RI ++A AH +L+ + ++DL YL + ++ NIF KDI S + V L + ++ GLI+ E+++N ++ AF D G I I++K+ DK+++ V+D+GIG Sbjct: 55 ISIPTGPVKDEVKGMTIPKNKGIGGWVISYNQPFISNDVVESDIFWKDLSTGFTTRNIICVPLRNSKGEAFGVMQAINKKEGKPFVNEDVPVFEAFAIHVATAIERSKKYDELENKLHDRNTQLSEIHHRLKNNLAIISALIEFDLEEVQDERSKEVLSATSSRIRSVADAHALLYDKPDQSKMDLSEYLLSIAHNVENIFSSPDKDIILSTRFEPVMLNSSRSMVCGLILNELLINAYKHAFVKKDSGDIIISLKRTGKDKIVMIVTDDGIG 327
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: A0A2D9FV90_9BACT (Histidine kinase domain-containing protein n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D9FV90_9BACT) HSP 1 Score: 213 bits (542), Expect = 1.490e-63 Identity = 98/273 (35.90%), Postives = 177/273 (64.84%), Query Frame = 1 Query: 1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIG 819 +SI TGPVKD+I+GM +P++KG+ GWV+ + ++ ND+ ES+ F+ D+S FTTRN+ICVP+ DS +A G++QA+N+K K F +D+ A H SL+I++ ++ D L+ ++ E++ +L E+H +NNL +S ++ + +SD+ + ++ +T +RI ++A AH +L+ + ++DL YL ++ ++ NIF K I S + V L + ++ GLI+ E+++N ++ AF D+G I I++K+ DKV++ ++D+G+G Sbjct: 60 ISIPTGPVKDEIRGMTVPKSKGIGGWVISYNQAFISNDVVESDIFWKDLSTGFTTRNIICVPLQDSEGQAFGVLQAINRKNNKPFLNEDVPVFEAFAIHVSLAIQRSKKYDKLEQKVQERNMQLSEIHHRLKNNLAIISGLIEFDLEAISDSMSKEILSATSSRIRSVADAHSLLYDKKDQSKMDLSTYLGYIAHNVENIFSSPQKKITLSTRFEPVQLDSSRSMLCGLIINELLINAYKHAFVKKDRGDIIISLKQTNKDKVVLIITDDGVG 332 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10158.1.1 >prot_C-australica_Contig_10158.1.1 ID=prot_C-australica_Contig_10158.1.1|Name=mRNA_C-australica_Contig_10158.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=278bp LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISback to top mRNA from alignment at C-australica_Contig_10158:3..836+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10158.1.1 ID=mRNA_C-australica_Contig_10158.1.1|Name=mRNA_C-australica_Contig_10158.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=834bp|location=Sequence derived from alignment at C-australica_Contig_10158:3..836+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10158:3..836+ >mRNA_C-australica_Contig_10158.1.1 ID=mRNA_C-australica_Contig_10158.1.1|Name=mRNA_C-australica_Contig_10158.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=834bp|location=Sequence derived from alignment at C-australica_Contig_10158:3..836+ (Chrysoparadoxa australica CS_1217)back to top |