mRNA_C-australica_Contig_10157.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10157.1.1 vs. uniprot
Match: A0A5P9I0Q8_9RHOB (Soluble lytic murein transglycosylase n=7 Tax=Roseovarius TaxID=74030 RepID=A0A5P9I0Q8_9RHOB) HSP 1 Score: 540 bits (1391), Expect = 7.400e-188 Identity = 268/278 (96.40%), Postives = 270/278 (97.12%), Query Frame = 1 Query: 1 TSFLGLLAAERGGCPFDRKRSGRQSFADWREADFAQGEVFQAGVLALANGRVSLAERFFKHLAATLEPPELGQLGQAMHDLGSPHLQVMVGKAAAQRGITLPAPYYPLHPMHELELPVPMELALAIARRESEFDQGVASGAGAMGLMQLMPGTAAEVARRLGEPGHTRSRVFDDWAYNARLGSAYLAQMASQFDGNVIMMAAGYNAGPARPPRWMTRFGDPRQEGGDIIDWIEHIPFNETRNYVMRVAESLPVYRARLGKEPHPVPFSQELVGNTLSP 834 TSF GLLAAERGG PFDRK +GRQSF DWR ADFAQGEVFQAGVLALANGRVSLAERFFKHLAATLEP ELGQLGQAMHDLGSPHLQVMVGKA A+RGITLPAPYYPLHPMHELELPVPMELALAIARRESEFDQGVASGAGAMGLMQLMPGTAAEVARRLGE GHTRSRVFDDWAYNARLGSAYLAQMASQFDGNVIMMAAGYNAGPARPPRWMTRFGDPRQEGGDIIDWIEHIPFNETRNYVMRVAESLPVYRARLGKEPHPVPFSQELVGNTLSP Sbjct: 392 TSFYGLLAAERGGFPFDRKLNGRQSFPDWRAADFAQGEVFQAGVLALANGRVSLAERFFKHLAATLEPSELGQLGQAMHDLGSPHLQVMVGKATARRGITLPAPYYPLHPMHELELPVPMELALAIARRESEFDQGVASGAGAMGLMQLMPGTAAEVARRLGETGHTRSRVFDDWAYNARLGSAYLAQMASQFDGNVIMMAAGYNAGPARPPRWMTRFGDPRQEGGDIIDWIEHIPFNETRNYVMRVAESLPVYRARLGKEPHPVPFSQELVGNTLSP 669
BLAST of mRNA_C-australica_Contig_10157.1.1 vs. uniprot
Match: A0A5P9H9M6_9RHOB (Soluble lytic murein transglycosylase n=2 Tax=Roseovarius sp. THAF27 TaxID=2587850 RepID=A0A5P9H9M6_9RHOB) HSP 1 Score: 506 bits (1302), Expect = 3.150e-174 Identity = 252/278 (90.65%), Postives = 260/278 (93.53%), Query Frame = 1 Query: 1 TSFLGLLAAERGGCPFDRKRSGRQSFADWREADFAQGEVFQAGVLALANGRVSLAERFFKHLAATLEPPELGQLGQAMHDLGSPHLQVMVGKAAAQRGITLPAPYYPLHPMHELELPVPMELALAIARRESEFDQGVASGAGAMGLMQLMPGTAAEVARRLGEPGHTRSRVFDDWAYNARLGSAYLAQMASQFDGNVIMMAAGYNAGPARPPRWMTRFGDPRQEGGDIIDWIEHIPFNETRNYVMRVAESLPVYRARLGKEPHPVPFSQELVGNTLSP 834 TSF GLLAAERGG PFDR GRQSF DWREA+FA+GEVFQAGVLALANGRVSLAE+FFKHLA TL+ L QLGQAMHDLGSPHLQVMVGKAAAQRGITLPAPYYPLHPMHEL+LPVPMELALAIARRESEFDQ VASGAGAMGLMQLMPGTAAEVARRLGE HTRSRVFDDWAYNARLGSAYLAQMA+QFDGNVIMM+A YNAGPARPP WMTRFGDPRQEGGDIIDWIEHIPFNETRNYVMRVAESLPVYRARLGKEPHPV FSQELVG+TL P Sbjct: 403 TSFYGLLAAERGGFPFDRALMGRQSFPDWREAEFARGEVFQAGVLALANGRVSLAEQFFKHLAGTLDLEPLRQLGQAMHDLGSPHLQVMVGKAAAQRGITLPAPYYPLHPMHELDLPVPMELALAIARRESEFDQNVASGAGAMGLMQLMPGTAAEVARRLGETDHTRSRVFDDWAYNARLGSAYLAQMAAQFDGNVIMMSAAYNAGPARPPSWMTRFGDPRQEGGDIIDWIEHIPFNETRNYVMRVAESLPVYRARLGKEPHPVRFSQELVGSTLKP 680
BLAST of mRNA_C-australica_Contig_10157.1.1 vs. uniprot
Match: UPI001080BD7A (lytic transglycosylase domain-containing protein n=1 Tax=Roseovarius aestuariivivens TaxID=1888910 RepID=UPI001080BD7A) HSP 1 Score: 417 bits (1072), Expect = 7.920e-140 Identity = 204/276 (73.91%), Postives = 233/276 (84.42%), Query Frame = 1 Query: 1 TSFLGLLAAERGGCPFDRKRSGRQSFADWREADFAQGEVFQAGVLALANGRVSLAERFFKHLAATLEPPELGQLGQAMHDLGSPHLQVMVGKAAAQRGITLPAPYYPLHPMHELELPVPMELALAIARRESEFDQGVASGAGAMGLMQLMPGTAAEVARRLGEPGHTRSRVFDDWAYNARLGSAYLAQMASQFDGNVIMMAAGYNAGPARPPRWMTRFGDPRQEGGDIIDWIEHIPFNETRNYVMRVAESLPVYRARLGKEPHPVPFSQELVGNTL 828 TSF GLLAAERGG P D G WR+A+FA G+VFQAGVLALA+GR+SLAERFF HLA L+ +L +LG+AM DLG PHL+VMVGKAAA RGITLPAPYY LHP+ E++L VP ELALAIARRESEFD VASGAGAMGLMQLMPGTA E+AR +G GHTR++VF DW YNARLG+AYLA+MA QFDGN++MM+A YNAGPARPPRWM+ FGDPR D++DWIEH+PFNETRNY+MRVAESLPVYRARLGK+PHPVPFSQELVG+T Sbjct: 378 TSFYGLLAAERGGLPSDPALRGEDP-GPWRDAEFASGDVFQAGVLALASGRLSLAERFFTHLAENLDRADLARLGKAMKDLGEPHLEVMVGKAAAGRGITLPAPYYALHPLAEMDLAVPPELALAIARRESEFDTSVASGAGAMGLMQLMPGTAEEMARAIGASGHTRAKVFADWTYNARLGAAYLARMARQFDGNIVMMSAAYNAGPARPPRWMSDFGDPRTGAVDVVDWIEHVPFNETRNYIMRVAESLPVYRARLGKDPHPVPFSQELVGDTF 652
BLAST of mRNA_C-australica_Contig_10157.1.1 vs. uniprot
Match: A0A1M7G981_9RHOB (Soluble lytic murein transglycosylase n=2 Tax=Roseovarius TaxID=74030 RepID=A0A1M7G981_9RHOB) HSP 1 Score: 379 bits (972), Expect = 7.410e-125 Identity = 188/276 (68.12%), Postives = 217/276 (78.62%), Query Frame = 1 Query: 1 TSFLGLLAAERGGCPFDRKRSGRQSFADWREADFAQGEVFQAGVLALANGRVSLAERFFKHLAATLEPPELGQLGQAMHDLGSPHLQVMVGKAAAQRGITLPAPYYPLHPMHELELPVPMELALAIARRESEFDQGVASGAGAMGLMQLMPGTAAEVARRLGEPGHTRSRVFDDWAYNARLGSAYLAQMASQFDGNVIMMAAGYNAGPARPPRWMTRFGDPRQEGGDIIDWIEHIPFNETRNYVMRVAESLPVYRARLGKEPHPVPFSQELVGNTL 828 TSF GLLAAE+ G P D +G ++ D R+A F Q V++A +LALA ++LAERFF HL+ +L+ LGQLG + +LG HLQVM+GKA AQRGI LPAPYY LHPM +++LPVPMELAL+IARRESEFD V SGAGAMGLMQLMPGTA ++AR LGE H+R RVF+DW YN RLGS YLA +A +FDGNV+MMAAGYNAGP RP WM GDPR G D++DWIEHIPF ETRNYVMRVAESLPVYRARLGK PHPVPFSQEL G TL Sbjct: 370 TSFYGLLAAEKAGLPADPDLAGDRALPDPRQAAFTQSLVYKAAILALAADELNLAERFFVHLSDSLDATGLGQLGAILAELGQAHLQVMIGKAGAQRGIVLPAPYYALHPMTDMDLPVPMELALSIARRESEFDHRVVSGAGAMGLMQLMPGTAGDMARVLGESDHSRVRVFNDWRYNVRLGSTYLAGLAERFDGNVVMMAAGYNAGPGRPRDWMAESGDPRSGGIDVVDWIEHIPFRETRNYVMRVAESLPVYRARLGKPPHPVPFSQELTGTTL 645
BLAST of mRNA_C-australica_Contig_10157.1.1 vs. uniprot
Match: A0A1X6YWZ3_9RHOB (Soluble lytic murein transglycosylase n=2 Tax=Roseovarius halotolerans TaxID=505353 RepID=A0A1X6YWZ3_9RHOB) HSP 1 Score: 377 bits (967), Expect = 4.820e-124 Identity = 186/278 (66.91%), Postives = 218/278 (78.42%), Query Frame = 1 Query: 1 TSFLGLLAAERGGCPFDRKRSGRQSFADWREADFAQGEVFQAGVLALANGRVSLAERFFKHLAATLEPPELGQLGQAMHDLGSPHLQVMVGKAAAQRGITLPAPYYPLHPMHELELPVPMELALAIARRESEFDQGVASGAGAMGLMQLMPGTAAEVARRLGEPGHTRSRVFDDWAYNARLGSAYLAQMASQFDGNVIMMAAGYNAGPARPPRWMTRFGDPRQEGGDIIDWIEHIPFNETRNYVMRVAESLPVYRARLGKEPHPVPFSQELVGNTLSP 834 TSF GLLAAER G P D +G ++F DWR A FA +++A VLALA G ++LAERFF HLA + + LGQ+G DLG PHLQVM+GK AAQRGITLP PYY LHPM E++L PMELAL+IARRESEFD V SGAGAMGLMQLMPGTA+++AR LG H+ SRV +DW YNARLGSAYLA +A++F GNV++M+AGYNAGP RP WM GDPR + D++DWIEHIPF ETRNYVMRVAESLP+YRARLG+ PHPVPF+QEL G TL P Sbjct: 375 TSFYGLLAAERAGLPADPDLAGDETFPDWRAAPFADTPLYKAAVLALAAGELNLAERFFTHLAESQDRTGLGQMGAMAQDLGQPHLQVMLGKTAAQRGITLPGPYYALHPMAEMDLAAPMELALSIARRESEFDHRVVSGAGAMGLMQLMPGTASDMARELGLGDHSASRVLNDWRYNARLGSAYLAGLAARFGGNVVLMSAGYNAGPGRPMTWMEDRGDPRADDIDVVDWIEHIPFRETRNYVMRVAESLPIYRARLGRPPHPVPFTQELKGATLLP 652
BLAST of mRNA_C-australica_Contig_10157.1.1 vs. uniprot
Match: A0A7C9HBF2_9RHOB (Lytic transglycosylase domain-containing protein n=2 Tax=Sediminimonas qiaohouensis TaxID=552061 RepID=A0A7C9HBF2_9RHOB) HSP 1 Score: 374 bits (959), Expect = 7.890e-123 Identity = 180/278 (64.75%), Postives = 219/278 (78.78%), Query Frame = 1 Query: 1 TSFLGLLAAERGGCPFDRKRSGRQSFADWREADFAQGEVFQAGVLALANGRVSLAERFFKHLAATLEPPELGQLGQAMHDLGSPHLQVMVGKAAAQRGITLPAPYYPLHPMHELELPVPMELALAIARRESEFDQGVASGAGAMGLMQLMPGTAAEVARRLGEPGHTRSRVFDDWAYNARLGSAYLAQMASQFDGNVIMMAAGYNAGPARPPRWMTRFGDPRQEGGDIIDWIEHIPFNETRNYVMRVAESLPVYRARLGKEPHPVPFSQELVGNTLSP 834 TSF GLLAAE G P D +G ++FA WREA+F + +F+ G+LA+ G VSLAERF HLA + LGQ+G +L PHL VM+GK AA RGI LP PYY LHPM +++LPVPME+ALAIARRESEFD VASGAGA+GLMQL+PGTA+++AR LG H RV DDW YNARLGSAYLA++ +F GNV+M++A YNAGPARPPRW+ + GDPR+ G D+IDWIEHIPF ETRNYVMRVAESLP+YRARLG++PHPVPFS+ELVG+++ P Sbjct: 373 TSFYGLLAAEAAGMPSDPALAGTEAFAPWREAEFTRAPLFRVGLLAMNAGEVSLAERFLLHLADGFDRTALGQMGAMAIELDQPHLAVMIGKLAAGRGIILPGPYYALHPMRQMDLPVPMEMALAIARRESEFDHRVASGAGALGLMQLLPGTASDMARALGRTDHDTRRVLDDWRYNARLGSAYLARLGWKFGGNVVMVSAAYNAGPARPPRWIDKNGDPREGGMDVIDWIEHIPFRETRNYVMRVAESLPIYRARLGRDPHPVPFSEELVGSSVLP 650
BLAST of mRNA_C-australica_Contig_10157.1.1 vs. uniprot
Match: A0A4S3MAC7_9RHOB (Lytic transglycosylase domain-containing protein n=1 Tax=Youngimonas vesicularis TaxID=1294297 RepID=A0A4S3MAC7_9RHOB) HSP 1 Score: 372 bits (955), Expect = 2.820e-122 Identity = 184/276 (66.67%), Postives = 219/276 (79.35%), Query Frame = 1 Query: 1 TSFLGLLAAERGGCPFDRKRSGRQSFADWREADFAQGEVFQAGVLALANGRVSLAERFFKHLAATLEPPELGQLGQAMHDLGSPHLQVMVGKAAAQRGITLPAPYYPLHPMHELELPVPMELALAIARRESEFDQGVASGAGAMGLMQLMPGTAAEVARRLGEPGHTRSRVFDDWAYNARLGSAYLAQMASQFDGNVIMMAAGYNAGPARPPRWMTRFGDPRQEGGDIIDWIEHIPFNETRNYVMRVAESLPVYRARLGKEPHPVPFSQELVGNTL 828 TSF GLLAAERGG FD +G + F DWR+A F + EV+QAG+LAL G VSL+E+FF HLA L+ +GQL +L PHLQVM+ KAAAQ+GIT+ APYY LHPM ++ LPVP+ELAL+IARRESEFD V SGAGA GLMQLMPGTAA++AR LG H S+V DW+YNA LGSAYLA++A +FDGNV+M+AAGYNAGP+RP +W+ RFGDPR G D++DWIE IPF ET+NYVMRVAESLPVYRARLG PHPVPFS+ELVG T+ Sbjct: 375 TSFYGLLAAERGGVAFDASLAGTERFPDWRQAAFVKSEVYQAGILALNAGEVSLSEQFFTHLAEGLDRTGMGQLADMAEELKQPHLQVMIAKAAAQKGITIHAPYYALHPMRKMTLPVPVELALSIARRESEFDPSVISGAGAQGLMQLMPGTAAQMARELGVT-HQASQVLSDWSYNATLGSAYLAKLADRFDGNVVMVAAGYNAGPSRPDQWIERFGDPRGGGVDVVDWIEMIPFTETQNYVMRVAESLPVYRARLGLNPHPVPFSRELVGATV 649
BLAST of mRNA_C-australica_Contig_10157.1.1 vs. uniprot
Match: A0A0T5PFG7_9RHOB (Tail length tape measure protein n=3 Tax=Roseovarius indicus TaxID=540747 RepID=A0A0T5PFG7_9RHOB) HSP 1 Score: 372 bits (954), Expect = 4.330e-122 Identity = 186/276 (67.39%), Postives = 216/276 (78.26%), Query Frame = 1 Query: 1 TSFLGLLAAERGGCPFDRKRSGRQSFADWREADFAQGEVFQAGVLALANGRVSLAERFFKHLAATLEPPELGQLGQAMHDLGSPHLQVMVGKAAAQRGITLPAPYYPLHPMHELELPVPMELALAIARRESEFDQGVASGAGAMGLMQLMPGTAAEVARRLGEPGHTRSRVFDDWAYNARLGSAYLAQMASQFDGNVIMMAAGYNAGPARPPRWMTRFGDPRQEGGDIIDWIEHIPFNETRNYVMRVAESLPVYRARLGKEPHPVPFSQELVGNTL 828 TSF GLLAAER G P D +G DWR A FAQ +F+AGVL L+ R+SLAE+FF L TLE E+ +LG A+ L PHL+VMVGKAAAQRG+ +P PYY LHPM +++LPVP+ELALAIARRESEFD V SGAGA GLMQLMPGTA+++AR LG HTRSRV DW YNA LGSAYLAQ+ ++FDGN++M++AGYNAGP RP RWM +GDPRQ DIIDWIEHIPF ET+NYVMRVAESLP+YRARLGK P PVPFS+EL G TL Sbjct: 375 TSFYGLLAAERAGMPPDPALAGAAPDPDWRNAPFAQSPLFKAGVLLLSTDRISLAEQFFVALTDTLEEDEINRLGHALDTLDEPHLEVMVGKAAAQRGLVVPGPYYALHPMRQMDLPVPVELALAIARRESEFDHRVQSGAGAQGLMQLMPGTASDMARSLGIQ-HTRSRVLSDWRYNATLGSAYLAQLVNRFDGNIVMVSAGYNAGPGRPLRWMKEYGDPRQGERDIIDWIEHIPFRETQNYVMRVAESLPIYRARLGKNPLPVPFSEELSGGTL 649
BLAST of mRNA_C-australica_Contig_10157.1.1 vs. uniprot
Match: A0A844CZ52_9RHOB (Lytic transglycosylase domain-containing protein n=1 Tax=Roseovarius bejariae TaxID=2576383 RepID=A0A844CZ52_9RHOB) HSP 1 Score: 372 bits (954), Expect = 4.450e-122 Identity = 183/276 (66.30%), Postives = 219/276 (79.35%), Query Frame = 1 Query: 1 TSFLGLLAAERGGCPFDRKRSGRQSFADWREADFAQGEVFQAGVLALANGRVSLAERFFKHLAATLEPPELGQLGQAMHDLGSPHLQVMVGKAAAQRGITLPAPYYPLHPMHELELPVPMELALAIARRESEFDQGVASGAGAMGLMQLMPGTAAEVARRLGEPGHTRSRVFDDWAYNARLGSAYLAQMASQFDGNVIMMAAGYNAGPARPPRWMTRFGDPRQEGGDIIDWIEHIPFNETRNYVMRVAESLPVYRARLGKEPHPVPFSQELVGNTL 828 TSF GLLAAE+ G P D G +A + ++ Q V QA ++ALA GR++LAERFF H+A TL+ EL QL ++DL PHLQVMVGK AA+R +TLP PYY LHPM ++ELPVPMELAL+IARRESEFD GV+S GA GLMQLMPGTA+++AR L + H R+RV DWAYNARLGSAYLA +A +FDGNV+M++AGYNAGP RP RW+ RFGDPR+ G D++DWIEHIPF ETRNYVMRVAESLPVYRARLG++PHP+PFSQEL G TL Sbjct: 377 TSFYGLLAAEKAGLPSDPALKGENDYAAYEGSELIQRPVTQAAIMALAAGRLNLAERFFTHIAETLDESELKQLVTLLYDLDQPHLQVMVGKRAARRALTLPGPYYALHPMIDMELPVPMELALSIARRESEFDHGVSSRVGAEGLMQLMPGTASDMAREL-DLDHDRARVLTDWAYNARLGSAYLAHLADRFDGNVVMISAGYNAGPTRPERWIERFGDPRRGGMDVVDWIEHIPFRETRNYVMRVAESLPVYRARLGRDPHPMPFSQELTGATL 651
BLAST of mRNA_C-australica_Contig_10157.1.1 vs. uniprot
Match: A0A1G8QE32_9RHOB (Soluble lytic murein transglycosylase n=1 Tax=Lutimaribacter saemankumensis TaxID=490829 RepID=A0A1G8QE32_9RHOB) HSP 1 Score: 371 bits (952), Expect = 7.960e-122 Identity = 187/278 (67.27%), Postives = 217/278 (78.06%), Query Frame = 1 Query: 1 TSFLGLLAAERGGCPFDRKRSGRQSFADWREADFAQGEVFQAGVLALANGRVSLAERFFKHLAATLEPPELGQLGQAMHDLGSPHLQVMVGKAAAQRGITLPAPYYPLHPMHELELPVPMELALAIARRESEFDQGVASGAGAMGLMQLMPGTAAEVARRLGEPGHTRSRVFDDWAYNARLGSAYLAQMASQFDGNVIMMAAGYNAGPARPPRWMTRFGDPRQEGGDIIDWIEHIPFNETRNYVMRVAESLPVYRARLGKEPHPVPFSQELVGNTLSP 834 TSF GLLAAER P D +G +SF DWR A F V++AG+LAL G+VS+AERFF HLA +L+ +LGQLGQ DLG PHL VM+GKA A RGITLP PYY LHP+ +++LPVP E+AL+IARRESEFD V SGAGA GLMQLMP TAAEVA LG H +RV +D +YNA LGSAYL ++A +FD NVIM+AA YNAGP+RP RWM GDPR+ G DI+DWIEHIPF ETRNYVMRV+ESLPVYRARLG++PHPVPFSQELVG TL P Sbjct: 373 TSFYGLLAAERASLPPDPALAGTESFPDWRTAPFTSSSVYRAGILALNAGQVSMAERFFAHLAESLDRTQLGQLGQMAQDLGQPHLSVMIGKAGAARGITLPGPYYALHPLKDMKLPVPAEMALSIARRESEFDPNVVSGAGAQGLMQLMPATAAEVAIGLGLD-HQPARVLNDPSYNAILGSAYLGELAVRFDANVIMVAAAYNAGPSRPERWMEEQGDPRKGGMDIVDWIEHIPFRETRNYVMRVSESLPVYRARLGRDPHPVPFSQELVGRTLLP 649 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10157.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10157.1.1 >prot_C-australica_Contig_10157.1.1 ID=prot_C-australica_Contig_10157.1.1|Name=mRNA_C-australica_Contig_10157.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=278bp TSFLGLLAAERGGCPFDRKRSGRQSFADWREADFAQGEVFQAGVLALANGback to top mRNA from alignment at C-australica_Contig_10157:3..836+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10157.1.1 ID=mRNA_C-australica_Contig_10157.1.1|Name=mRNA_C-australica_Contig_10157.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=834bp|location=Sequence derived from alignment at C-australica_Contig_10157:3..836+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10157:3..836+ >mRNA_C-australica_Contig_10157.1.1 ID=mRNA_C-australica_Contig_10157.1.1|Name=mRNA_C-australica_Contig_10157.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=834bp|location=Sequence derived from alignment at C-australica_Contig_10157:3..836+ (Chrysoparadoxa australica CS_1217)back to top |