mRNA_C-australica_Contig_10133.3.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_10133.3.1 vs. uniprot
Match: A0A0K1UEK1_9GAMM (Citrate synthase n=115 Tax=root TaxID=1 RepID=A0A0K1UEK1_9GAMM) HSP 1 Score: 384 bits (987), Expect = 1.010e-131 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1 Query: 1 MTDRKATLSVGDKSIELPVYSGTVGPDVIDVRGLVQEGVFTYDPGFVSTAACESAITYIDGANGVLLHRGYPIEQLAEHSDYLEVCYLLLHGELPSAEENQKFHDTIKNHTMLHDQMRNFFQGFRRDAHPMAIMCGVVGALSAFYHGEMDVASQEQREITAHRLIAKMPTIAAWCYKYAIGQPFIY 558
MTDRKATLSVGDKSIELPVYSGTVGPDVIDVRGLVQEGVFTYDPGFVSTAACESAITYIDGANGVLLHRGYPIEQLAEHSDYLEVCYLLLHGELPSAEENQKFHDTIKNHTMLHDQMRNFFQGFRRDAHPMAIMCGVVGALSAFYHGEMDVASQEQREITAHRLIAKMPTIAAWCYKYAIGQPFIY
Sbjct: 1 MTDRKATLSVGDKSIELPVYSGTVGPDVIDVRGLVQEGVFTYDPGFVSTAACESAITYIDGANGVLLHRGYPIEQLAEHSDYLEVCYLLLHGELPSAEENQKFHDTIKNHTMLHDQMRNFFQGFRRDAHPMAIMCGVVGALSAFYHGEMDVASQEQREITAHRLIAKMPTIAAWCYKYAIGQPFIY 186
BLAST of mRNA_C-australica_Contig_10133.3.1 vs. uniprot
Match: UPI00200E6971 (citrate synthase n=3 Tax=Marinobacter TaxID=2742 RepID=UPI00200E6971) HSP 1 Score: 345 bits (886), Expect = 2.130e-116 Identity = 162/186 (87.10%), Postives = 175/186 (94.09%), Query Frame = 1 Query: 1 MTDRKATLSVGDKSIELPVYSGTVGPDVIDVRGLVQEGVFTYDPGFVSTAACESAITYIDGANGVLLHRGYPIEQLAEHSDYLEVCYLLLHGELPSAEENQKFHDTIKNHTMLHDQMRNFFQGFRRDAHPMAIMCGVVGALSAFYHGEMDVASQEQREITAHRLIAKMPTIAAWCYKYAIGQPFIY 558
MTDRKATL+VG+KS+ELPVYSGTVGPDVIDVR LVQ+GVFTYDPGFVSTAACESAIT+IDG GVLLHRGYPIEQLAEHSDYLE+C+LLLHGELP+AEEN FH+TIKNHTMLHDQMRNFF GFRRDAHPMAIMCGVVGALSAFYH +MDV + QREIT HRLIAKMPTIAAWCYKY+IGQPF+Y
Sbjct: 1 MTDRKATLTVGNKSLELPVYSGTVGPDVIDVRSLVQQGVFTYDPGFVSTAACESAITFIDGEKGVLLHRGYPIEQLAEHSDYLELCWLLLHGELPTAEENVAFHETIKNHTMLHDQMRNFFNGFRRDAHPMAIMCGVVGALSAFYHDQMDVTDEHQREITGHRLIAKMPTIAAWCYKYSIGQPFVY 186
BLAST of mRNA_C-australica_Contig_10133.3.1 vs. uniprot
Match: UPI001265826E (citrate synthase n=1 Tax=Marinobacter changyiensis TaxID=2604091 RepID=UPI001265826E) HSP 1 Score: 343 bits (881), Expect = 1.220e-115 Identity = 163/186 (87.63%), Postives = 171/186 (91.94%), Query Frame = 1 Query: 1 MTDRKATLSVGDKSIELPVYSGTVGPDVIDVRGLVQEGVFTYDPGFVSTAACESAITYIDGANGVLLHRGYPIEQLAEHSDYLEVCYLLLHGELPSAEENQKFHDTIKNHTMLHDQMRNFFQGFRRDAHPMAIMCGVVGALSAFYHGEMDVASQEQREITAHRLIAKMPTIAAWCYKYAIGQPFIY 558
MTDR ATLSVGDKSIELPVYSGT GPDVID+R LVQE VFTYDPGF+STAACES ITYIDGANGVLLHRGYPIEQLAEHSDYLEVC+LLLHGELP+ EENQ F DT+KNHTM+HDQMRNFF GFRRDAHPMAIMCGVVGALSAFYH +MDV QREITAHRLIAKMPTIAAWCYKYA GQPF+Y
Sbjct: 1 MTDRTATLSVGDKSIELPVYSGTTGPDVIDIRALVQEDVFTYDPGFISTAACESKITYIDGANGVLLHRGYPIEQLAEHSDYLEVCFLLLHGELPTPEENQLFRDTVKNHTMIHDQMRNFFNGFRRDAHPMAIMCGVVGALSAFYHDQMDVTDIHQREITAHRLIAKMPTIAAWCYKYANGQPFMY 186
BLAST of mRNA_C-australica_Contig_10133.3.1 vs. uniprot
Match: A0A2A2I3W3_9GAMM (Citrate synthase n=9 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2A2I3W3_9GAMM) HSP 1 Score: 333 bits (854), Expect = 1.460e-111 Identity = 156/186 (83.87%), Postives = 175/186 (94.09%), Query Frame = 1 Query: 1 MTDRKATLSVGDKSIELPVYSGTVGPDVIDVRGLVQEGVFTYDPGFVSTAACESAITYIDGANGVLLHRGYPIEQLAEHSDYLEVCYLLLHGELPSAEENQKFHDTIKNHTMLHDQMRNFFQGFRRDAHPMAIMCGVVGALSAFYHGEMDVASQEQREITAHRLIAKMPTIAAWCYKYAIGQPFIY 558
MTDRKATLSVG++SIELPVYSGT GPDVIDVR LVQEGVFTYDPGFVSTAACES ITYIDGANG+LLHRGYPI++LAE+SDYLEVCYLLL+GELP+ E+ + F DT+K+HTM+HDQMR+FF GFRRDAHPMAIMCGVVGALSAFYH +MDV ++EQR+ITAHRL+AKMPTIAAWCYKYA GQPFIY
Sbjct: 1 MTDRKATLSVGEQSIELPVYSGTEGPDVIDVRSLVQEGVFTYDPGFVSTAACESKITYIDGANGILLHRGYPIQELAENSDYLEVCYLLLNGELPTKEQGEVFKDTVKHHTMIHDQMRHFFSGFRRDAHPMAIMCGVVGALSAFYHDQMDVNNEEQRQITAHRLVAKMPTIAAWCYKYANGQPFIY 186
BLAST of mRNA_C-australica_Contig_10133.3.1 vs. uniprot
Match: A0A1E7PZN2_9GAMM (Citrate synthase n=1 Tax=Marinobacter sp. X15-166B TaxID=1897620 RepID=A0A1E7PZN2_9GAMM) HSP 1 Score: 331 bits (848), Expect = 1.220e-110 Identity = 156/186 (83.87%), Postives = 168/186 (90.32%), Query Frame = 1 Query: 1 MTDRKATLSVGDKSIELPVYSGTVGPDVIDVRGLVQEGVFTYDPGFVSTAACESAITYIDGANGVLLHRGYPIEQLAEHSDYLEVCYLLLHGELPSAEENQKFHDTIKNHTMLHDQMRNFFQGFRRDAHPMAIMCGVVGALSAFYHGEMDVASQEQREITAHRLIAKMPTIAAWCYKYAIGQPFIY 558
MTD+KATLSVGDKSIELP+YSG GPDVIDVR L Q VFTYDPGF+STAACES ITYIDG GVLLHRGYPIEQLAE SDYLEVCYLLL+GELPS E+N++FHDT+KNHTMLHDQMRNFF GFRRDAHPMAIMCGVVGALSAFYH +MDV QREIT HRLIAKMPTIAAWC+KY+IGQPF+Y
Sbjct: 1 MTDKKATLSVGDKSIELPIYSGNAGPDVIDVRALAQHDVFTYDPGFLSTAACESKITYIDGDKGVLLHRGYPIEQLAELSDYLEVCYLLLNGELPSKEQNKQFHDTVKNHTMLHDQMRNFFNGFRRDAHPMAIMCGVVGALSAFYHDQMDVTDARQREITGHRLIAKMPTIAAWCHKYSIGQPFMY 186
BLAST of mRNA_C-australica_Contig_10133.3.1 vs. uniprot
Match: A0A7Y8VEC2_9ALTE (Citrate synthase n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7Y8VEC2_9ALTE) HSP 1 Score: 326 bits (836), Expect = 8.040e-109 Identity = 154/186 (82.80%), Postives = 170/186 (91.40%), Query Frame = 1 Query: 1 MTDRKATLSVGDKSIELPVYSGTVGPDVIDVRGLVQEGVFTYDPGFVSTAACESAITYIDGANGVLLHRGYPIEQLAEHSDYLEVCYLLLHGELPSAEENQKFHDTIKNHTMLHDQMRNFFQGFRRDAHPMAIMCGVVGALSAFYHGEMDVASQEQREITAHRLIAKMPTIAAWCYKYAIGQPFIY 558
MTDRKATLSVGDKSIELPVYSGT+GPDVIDVR LVQEGVFTYDPGFVSTAACESAITYIDG GVLLHRGYPI QLAE+SD+LEVCYLLL+GELP+ + +++ TIK H+MLHDQMRNFF GFRRDAHPMAIMCGVVGALSAFYH +MD+ +QREIT HRLIAKMPTIAAWCYKY++GQPF+Y
Sbjct: 1 MTDRKATLSVGDKSIELPVYSGTIGPDVIDVRSLVQEGVFTYDPGFVSTAACESAITYIDGNQGVLLHRGYPINQLAENSDFLEVCYLLLNGELPTDAQLEEYKGTIKTHSMLHDQMRNFFNGFRRDAHPMAIMCGVVGALSAFYHNQMDINDPKQREITGHRLIAKMPTIAAWCYKYSVGQPFMY 186
BLAST of mRNA_C-australica_Contig_10133.3.1 vs. uniprot
Match: UPI000BE60AC6 (citrate synthase n=1 Tax=Mangrovitalea sediminis TaxID=1982043 RepID=UPI000BE60AC6) HSP 1 Score: 324 bits (831), Expect = 4.600e-108 Identity = 151/186 (81.18%), Postives = 171/186 (91.94%), Query Frame = 1 Query: 1 MTDRKATLSVGDKSIELPVYSGTVGPDVIDVRGLVQEGVFTYDPGFVSTAACESAITYIDGANGVLLHRGYPIEQLAEHSDYLEVCYLLLHGELPSAEENQKFHDTIKNHTMLHDQMRNFFQGFRRDAHPMAIMCGVVGALSAFYHGEMDVASQEQREITAHRLIAKMPTIAAWCYKYAIGQPFIY 558
MTD+KA LSVGD+SIELPVYSGT GPDV+DVRGLVQ+G+FTYDPGFVSTAACES IT+IDGANGVLLHRGYPIEQLAE +DYL+VCYLLLHGELPSAE++QKF DT+KNHTM+HDQM +FF GFRRDAHPMA+MCGVVGALSAFYH MD + + QREI A RLIAKMPT+AA C+KY++GQPFIY
Sbjct: 1 MTDKKALLSVGDQSIELPVYSGTAGPDVVDVRGLVQQGLFTYDPGFVSTAACESKITFIDGANGVLLHRGYPIEQLAEKTDYLDVCYLLLHGELPSAEQSQKFRDTVKNHTMIHDQMSHFFNGFRRDAHPMAVMCGVVGALSAFYHDTMDFSDEHQREIAAFRLIAKMPTLAAMCHKYSMGQPFIY 186
BLAST of mRNA_C-australica_Contig_10133.3.1 vs. uniprot
Match: Q2SD27_HAHCH (Citrate synthase n=4 Tax=Hahella TaxID=158481 RepID=Q2SD27_HAHCH) HSP 1 Score: 315 bits (807), Expect = 1.980e-104 Identity = 147/186 (79.03%), Postives = 166/186 (89.25%), Query Frame = 1 Query: 1 MTDRKATLSVGDKSIELPVYSGTVGPDVIDVRGLVQEGVFTYDPGFVSTAACESAITYIDGANGVLLHRGYPIEQLAEHSDYLEVCYLLLHGELPSAEENQKFHDTIKNHTMLHDQMRNFFQGFRRDAHPMAIMCGVVGALSAFYHGEMDVASQEQREITAHRLIAKMPTIAAWCYKYAIGQPFIY 558
MTD+KATLSV K+IELPVYSG GPDVIDVRGLV+EG+FTYDPGFVSTAACES ITYIDGANGVLLHRGYPIEQLAE SDYLEVCYLL+HGELP+AE+ ++F T+KNHTM+H+Q+RNFF GFRRDAHPMAIMCGVVGALSAFYH MD + + REI A RL+AKMPT+AA CYKY+ GQPF+Y
Sbjct: 1 MTDKKATLSVNGKTIELPVYSGATGPDVIDVRGLVEEGLFTYDPGFVSTAACESQITYIDGANGVLLHRGYPIEQLAEKSDYLEVCYLLIHGELPTAEQAEEFRSTVKNHTMIHEQLRNFFNGFRRDAHPMAIMCGVVGALSAFYHDTMDFSDEHHREIAAFRLMAKMPTLAAMCYKYSTGQPFMY 186
BLAST of mRNA_C-australica_Contig_10133.3.1 vs. uniprot
Match: A0A1Y0IAC8_9GAMM (Citrate synthase n=1 Tax=Oleiphilus messinensis TaxID=141451 RepID=A0A1Y0IAC8_9GAMM) HSP 1 Score: 314 bits (805), Expect = 3.980e-104 Identity = 148/186 (79.57%), Postives = 167/186 (89.78%), Query Frame = 1 Query: 1 MTDRKATLSVGDKSIELPVYSGTVGPDVIDVRGLVQEGVFTYDPGFVSTAACESAITYIDGANGVLLHRGYPIEQLAEHSDYLEVCYLLLHGELPSAEENQKFHDTIKNHTMLHDQMRNFFQGFRRDAHPMAIMCGVVGALSAFYHGEMDVASQEQREITAHRLIAKMPTIAAWCYKYAIGQPFIY 558
M+D+KA LSVG K+I+LPVYSGT GPDVIDVRGLV EGVFTYDPGFVSTAACES ITYIDGANG+LLHRGYPIEQLAE SDYLE C+LLLHGELP+ EE++KF +T+KNHTM+HDQ+ +FF GFRRDAHPMAIMCGVVGALSAFYH MD + QE REI A RLIAKMPT+AA CYKY++GQPF+Y
Sbjct: 1 MSDKKAQLSVGGKTIDLPVYSGTEGPDVIDVRGLVAEGVFTYDPGFVSTAACESQITYIDGANGILLHRGYPIEQLAEKSDYLETCFLLLHGELPTPEESEKFRNTVKNHTMVHDQVIHFFNGFRRDAHPMAIMCGVVGALSAFYHDSMDFSDQEHREIAAFRLIAKMPTLAAMCYKYSMGQPFMY 186
BLAST of mRNA_C-australica_Contig_10133.3.1 vs. uniprot
Match: A0A657AJL0_9GAMM (Citrate synthase n=9 Tax=unclassified Oleiphilus TaxID=2631174 RepID=A0A657AJL0_9GAMM) HSP 1 Score: 312 bits (799), Expect = 3.120e-103 Identity = 145/186 (77.96%), Postives = 166/186 (89.25%), Query Frame = 1 Query: 1 MTDRKATLSVGDKSIELPVYSGTVGPDVIDVRGLVQEGVFTYDPGFVSTAACESAITYIDGANGVLLHRGYPIEQLAEHSDYLEVCYLLLHGELPSAEENQKFHDTIKNHTMLHDQMRNFFQGFRRDAHPMAIMCGVVGALSAFYHGEMDVASQEQREITAHRLIAKMPTIAAWCYKYAIGQPFIY 558
MTD+KA LSV K+I+LP+YSG+VGPDVIDVRGLV EGVFTYDPGFVSTAACES ITYIDG GVLLHRGYPIEQLAE+SDYLE+C+LLLHGELP+AEEN+ F T++NHTM+HDQ+ FF+GFRRDAHPMAIMCGVVGALSAFYH MD++ +E REI RL+AKMPTIAA CYKY+IGQPF+Y
Sbjct: 1 MTDKKAQLSVDGKTIDLPIYSGSVGPDVIDVRGLVSEGVFTYDPGFVSTAACESKITYIDGGKGVLLHRGYPIEQLAENSDYLELCHLLLHGELPTAEENEHFRKTVRNHTMVHDQVNQFFKGFRRDAHPMAIMCGVVGALSAFYHDTMDISDEEHREIAGFRLVAKMPTIAAMCYKYSIGQPFMY 186 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10133.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10133.3.1 >prot_C-australica_Contig_10133.3.1 ID=prot_C-australica_Contig_10133.3.1|Name=mRNA_C-australica_Contig_10133.3.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=186bp MTDRKATLSVGDKSIELPVYSGTVGPDVIDVRGLVQEGVFTYDPGFVSTAback to top mRNA from alignment at C-australica_Contig_10133:281..838+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10133.3.1 ID=mRNA_C-australica_Contig_10133.3.1|Name=mRNA_C-australica_Contig_10133.3.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=558bp|location=Sequence derived from alignment at C-australica_Contig_10133:281..838+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10133:281..838+ >mRNA_C-australica_Contig_10133.3.1 ID=mRNA_C-australica_Contig_10133.3.1|Name=mRNA_C-australica_Contig_10133.3.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=558bp|location=Sequence derived from alignment at C-australica_Contig_10133:281..838+ (Chrysoparadoxa australica CS_1217)back to top |